AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1330690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330690 MtrunA17_Chr4g0064471 91.667 456 26 2 1 445 1 455 0.0 813
Msa1330690 MtrunA17_Chr4g0064471 64.186 430 126 2 417 818 44 473 0.0 568
Msa1330690 MtrunA17_Chr4g0064461 89.447 398 18 1 442 815 68 465 0.0 737
Msa1330690 MtrunA17_Chr4g0064461 62.945 421 136 4 47 456 50 461 0.0 542
Msa1330690 MtrunA17_Chr4g0064411 56.848 387 149 5 72 445 66 447 6.71e-153 455
Msa1330690 MtrunA17_Chr4g0064411 53.535 396 153 4 447 815 71 462 5.22e-142 427
Msa1330690 MtrunA17_Chr7g0265461 53.747 387 152 5 450 815 18 398 4.13e-138 415
Msa1330690 MtrunA17_Chr7g0265461 48.756 402 184 5 66 456 4 394 1.43e-129 393
Msa1330690 MtrunA17_Chr7g0265451 48.832 428 177 6 409 815 109 515 6.12e-135 411
Msa1330690 MtrunA17_Chr7g0265451 51.467 375 158 7 83 445 138 500 4.28e-125 385
Msa1330690 MtrunA17_Chr3g0137491 52.473 364 162 4 459 816 34 392 1.06e-129 393
Msa1330690 MtrunA17_Chr3g0137491 47.838 370 175 4 89 456 34 387 2.01e-115 355
Msa1330690 MtrunA17_Chr1g0179651 53.801 342 151 4 475 815 4 339 5.03e-126 381
Msa1330690 MtrunA17_Chr1g0179651 51.039 337 158 4 121 456 5 335 2.75e-114 351
Msa1330690 MtrunA17_Chr3g0131051 47.030 404 193 6 67 456 91 487 2.63e-114 356
Msa1330690 MtrunA17_Chr3g0131051 45.823 395 183 4 446 815 103 491 1.33e-111 349
Msa1330690 MtrunA17_Chr3g0120131 47.044 389 186 4 82 456 96 478 2.07e-113 353
Msa1330690 MtrunA17_Chr3g0120131 46.154 390 175 3 452 812 96 479 2.31e-113 353
Msa1330690 MtrunA17_Chr3g0119721 50.445 337 161 2 476 812 11 341 1.35e-112 347
Msa1330690 MtrunA17_Chr3g0119721 48.810 336 166 2 121 456 11 340 2.30e-107 333
Msa1330690 MtrunA17_Chr7g0265381 41.622 370 193 9 86 445 3 359 3.09e-84 273
Msa1330690 MtrunA17_Chr7g0265381 39.884 346 187 9 474 811 38 370 1.91e-76 253
Msa1330690 MtrunA17_Chr4g0055991 39.788 377 206 7 447 812 167 533 4.94e-84 278
Msa1330690 MtrunA17_Chr4g0055991 40.988 344 182 7 113 445 188 521 3.48e-73 249
Msa1330690 MtrunA17_Chr3g0140131 37.650 417 221 10 59 445 172 579 1.05e-79 268
Msa1330690 MtrunA17_Chr3g0140131 39.769 347 186 9 474 811 258 590 1.94e-74 254
Msa1330690 MtrunA17_Chr1g0146181 39.946 368 202 7 86 445 216 572 5.44e-79 266
Msa1330690 MtrunA17_Chr1g0146181 38.617 347 190 7 474 811 251 583 4.65e-75 255
Msa1330690 MtrunA17_Chr1g0197381 38.617 347 186 7 475 812 217 545 9.67e-79 264
Msa1330690 MtrunA17_Chr1g0197381 39.820 334 174 6 121 445 218 533 2.44e-78 263
Msa1330690 MtrunA17_Chr8g0390121 40.290 345 188 6 474 811 273 606 4.77e-76 259
Msa1330690 MtrunA17_Chr8g0390121 37.037 378 202 8 85 445 237 595 8.91e-75 255
Msa1330690 MtrunA17_Chr3g0140141 41.092 348 188 10 103 445 202 537 2.99e-75 255
Msa1330690 MtrunA17_Chr3g0140141 40.058 347 185 10 474 811 216 548 1.83e-74 253
Msa1330690 MtrunA17_Chr5g0411991 34.897 341 202 6 474 809 84 409 4.25e-69 234
Msa1330690 MtrunA17_Chr5g0411991 35.168 327 192 5 124 445 89 400 2.29e-63 218
Msa1330690 MtrunA17_Chr7g0253441 34.746 354 204 12 475 819 150 485 3.16e-54 195
Msa1330690 MtrunA17_Chr7g0253441 36.443 343 181 12 113 442 145 463 2.75e-51 187
Msa1330690 MtrunA17_Chr5g0421571 36.493 211 117 5 474 682 137 332 2.91e-36 140
Msa1330690 MtrunA17_Chr5g0421571 33.990 203 117 4 124 324 142 329 1.22e-31 126
Msa1330690 MtrunA17_Chr8g0385651 27.077 325 192 10 520 806 67 384 8.40e-26 110
Msa1330690 MtrunA17_Chr8g0385651 23.032 343 229 8 141 449 41 382 1.80e-21 97.8
Msa1330690 MtrunA17_Chr8g0385671 27.077 325 192 10 520 806 67 384 1.98e-25 110
Msa1330690 MtrunA17_Chr8g0385671 24.038 312 204 7 141 420 41 351 2.20e-21 97.8
Msa1330690 MtrunA17_Chr5g0436111 26.705 352 151 13 475 814 44 300 4.15e-25 106
Msa1330690 MtrunA17_Chr5g0436111 27.273 165 94 5 121 284 45 184 1.37e-12 69.7
Msa1330690 MtrunA17_Chr2g0320251 26.331 338 192 14 123 425 83 398 8.33e-24 105
Msa1330690 MtrunA17_Chr2g0320251 26.667 360 217 14 478 806 83 426 1.30e-22 101
Msa1330690 MtrunA17_Chr4g0028201 26.820 261 171 5 566 806 184 444 4.92e-22 100
Msa1330690 MtrunA17_Chr4g0028201 25.135 370 233 11 118 462 96 446 2.25e-20 95.1
Msa1330690 MtrunA17_Chr3g0092341 28.179 291 175 11 170 442 187 461 5.68e-20 94.4
Msa1330690 MtrunA17_Chr3g0092341 25.000 328 213 11 500 806 155 470 3.63e-17 85.5
Msa1330690 MtrunA17_Chr6g0460631 27.778 324 208 12 500 806 151 465 9.23e-19 90.5
Msa1330690 MtrunA17_Chr6g0460631 27.852 298 174 11 166 442 179 456 4.94e-17 85.1
Msa1330690 MtrunA17_Chr1g0200871 27.296 392 233 15 90 445 59 434 2.57e-18 89.0
Msa1330690 MtrunA17_Chr8g0377331 25.378 331 200 12 502 806 89 398 1.23e-17 86.3
Msa1330690 MtrunA17_Chr8g0377331 26.452 310 187 14 151 439 97 386 9.19e-13 71.2
Msa1330690 MtrunA17_Chr3g0122631 26.384 307 179 14 525 806 116 400 2.58e-17 85.5
Msa1330690 MtrunA17_Chr3g0122631 26.400 250 152 9 209 439 152 388 4.73e-12 68.9
Msa1330690 MtrunA17_Chr4g0039811 24.671 304 185 9 160 441 169 450 4.24e-17 85.5
Msa1330690 MtrunA17_Chr4g0039811 23.377 308 210 7 521 815 175 469 3.59e-14 76.3
Msa1330690 MtrunA17_Chr1g0159421 25.291 344 219 13 485 803 75 405 2.40e-16 82.4
Msa1330690 MtrunA17_Chr1g0159421 24.419 344 208 12 129 440 74 397 6.20e-13 72.0
Msa1330690 MtrunA17_Chr4g0043801 23.875 289 184 12 170 437 160 433 4.67e-15 79.0
Msa1330690 MtrunA17_Chr4g0043801 24.138 290 182 13 525 792 160 433 7.84e-13 71.6
Msa1330690 MtrunA17_Chr7g0254391 28.028 289 177 11 170 442 188 461 1.83e-14 77.0
Msa1330690 MtrunA17_Chr7g0254391 28.276 290 179 11 532 806 195 470 4.83e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1330690 AT3G42180.1 63.689 347 123 1 113 456 118 464 4.23e-160 474
Msa1330690 AT3G42180.1 60.377 371 143 2 448 815 99 468 1.89e-158 470
Msa1330690 AT5G33290.1 64.244 344 120 1 475 815 155 498 3.15e-159 473
Msa1330690 AT5G33290.1 58.311 379 154 2 81 456 117 494 8.97e-157 467
Msa1330690 AT3G42180.4 64.478 335 116 1 125 456 1 335 1.22e-157 463
Msa1330690 AT3G42180.4 63.422 339 121 1 480 815 1 339 1.70e-155 457
Msa1330690 AT5G20260.2 58.182 385 132 4 456 815 85 465 3.93e-157 466
Msa1330690 AT5G20260.2 58.108 370 137 5 86 443 85 448 3.93e-157 466
Msa1330690 AT5G20260.3 61.561 346 128 3 471 815 19 360 2.42e-154 455
Msa1330690 AT5G20260.3 61.728 324 119 3 121 443 24 343 4.04e-150 444
Msa1330690 AT5G11130.1 54.962 393 144 3 455 818 91 479 3.27e-152 454
Msa1330690 AT5G11130.1 53.109 386 163 4 85 456 91 472 7.13e-145 436
Msa1330690 AT5G20260.1 62.315 337 122 3 480 815 1 333 3.22e-151 446
Msa1330690 AT5G20260.1 61.562 320 118 3 125 443 1 316 1.69e-147 437
Msa1330690 AT5G11130.2 59.587 339 133 2 480 818 1 335 5.28e-149 441
Msa1330690 AT5G11130.2 56.024 332 142 2 125 456 1 328 8.42e-140 417
Msa1330690 AT5G03795.1 51.151 391 164 4 446 815 131 515 4.54e-136 414
Msa1330690 AT5G03795.1 50.400 375 174 4 77 445 132 500 5.41e-126 388
Msa1330690 AT5G25310.1 47.013 385 173 5 456 815 101 479 5.49e-119 369
Msa1330690 AT5G25310.1 41.336 479 243 10 6 461 17 480 1.51e-111 349
Msa1330690 AT3G07620.1 49.123 342 169 2 475 816 123 459 1.51e-114 356
Msa1330690 AT3G07620.1 46.216 370 182 4 85 442 76 440 1.18e-111 348
Msa1330690 AT4G16745.1 42.120 349 183 7 474 812 190 529 1.52e-89 293
Msa1330690 AT4G16745.1 38.243 387 212 7 77 445 140 517 2.12e-83 277
Msa1330690 AT4G16745.2 37.019 416 218 9 77 471 140 532 5.66e-83 277
Msa1330690 AT4G16745.2 40.327 367 187 10 474 818 190 546 5.89e-82 274
Msa1330690 AT5G19670.1 41.124 338 185 6 113 445 265 593 7.72e-81 272
Msa1330690 AT5G19670.1 38.329 347 192 7 474 811 271 604 1.18e-75 258
Msa1330690 AT5G19670.2 41.124 338 185 6 113 445 265 593 7.72e-81 272
Msa1330690 AT5G19670.2 38.329 347 192 7 474 811 271 604 1.18e-75 258
Msa1330690 AT4G32790.1 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1330690 AT4G32790.1 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1330690 AT4G32790.3 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1330690 AT4G32790.3 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1330690 AT4G32790.2 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1330690 AT4G32790.2 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1330690 AT5G25820.1 41.311 351 178 10 474 811 314 649 2.12e-75 258
Msa1330690 AT5G25820.1 40.870 345 178 10 113 445 308 638 3.87e-74 255
Msa1330690 AT5G11610.1 37.709 358 201 7 85 433 174 518 2.99e-71 244
Msa1330690 AT5G11610.1 38.810 353 181 10 474 811 210 542 6.13e-68 235
Msa1330690 AT5G37000.1 36.571 350 193 7 475 812 217 549 4.86e-70 241
Msa1330690 AT5G37000.1 37.576 330 183 6 125 445 222 537 2.87e-68 236
Msa1330690 AT4G38040.1 36.364 341 197 6 474 809 94 419 5.32e-69 234
Msa1330690 AT4G38040.1 35.843 332 193 5 119 445 94 410 2.17e-63 219
Msa1330690 AT4G38040.2 34.700 317 187 5 119 430 94 395 1.25e-58 206
Msa1330690 AT4G38040.2 34.700 317 187 6 474 785 94 395 3.74e-58 204
Msa1330690 AT5G11610.2 34.722 288 166 7 85 363 174 448 6.92e-46 171
Msa1330690 AT5G11610.2 35.659 258 134 8 474 718 210 448 3.38e-39 152
Msa1330690 AT1G27440.1 27.950 322 193 10 520 806 63 380 4.21e-27 115
Msa1330690 AT1G27440.1 24.668 377 237 13 106 449 16 378 1.90e-24 107
Msa1330690 AT5G61840.1 27.855 359 205 13 481 806 46 383 1.31e-25 110
Msa1330690 AT5G61840.1 25.714 350 220 10 126 449 46 381 2.22e-24 107
Msa1330690 AT2G28110.1 23.457 405 257 13 69 442 42 424 8.11e-24 105
Msa1330690 AT2G28110.1 24.057 424 250 14 422 806 43 433 1.29e-21 99.4
Msa1330690 AT5G11610.3 33.333 162 98 4 85 242 174 329 7.64e-23 101
Msa1330690 AT5G11610.3 34.884 129 70 4 474 597 210 329 3.35e-17 84.3
Msa1330690 AT5G22940.1 26.909 275 168 8 566 814 187 454 1.11e-20 96.7
Msa1330690 AT5G22940.1 24.172 302 195 11 165 442 147 438 9.04e-18 87.8
Msa1330690 AT5G22940.2 26.909 275 168 8 566 814 216 483 1.32e-20 96.7
Msa1330690 AT5G22940.2 24.172 302 195 11 165 442 176 467 1.07e-17 87.4
Msa1330690 AT1G67410.1 28.819 288 167 10 174 439 123 394 2.17e-20 95.5
Msa1330690 AT1G67410.1 28.333 300 177 10 529 806 123 406 2.57e-20 95.1
Msa1330690 AT1G74680.1 27.113 284 191 6 532 806 156 432 1.47e-17 87.0
Msa1330690 AT1G74680.1 28.223 287 186 9 167 442 146 423 4.32e-17 85.5
Msa1330690 AT5G16890.1 25.146 342 198 13 133 441 140 456 1.52e-17 87.0
Msa1330690 AT5G16890.1 25.212 353 209 13 479 796 124 456 7.91e-16 81.6
Msa1330690 AT2G35100.1 24.324 296 189 10 515 792 117 395 3.43e-16 82.4
Msa1330690 AT2G35100.1 22.526 293 198 9 160 437 117 395 5.20e-16 82.0
Msa1330690 AT1G21480.2 24.000 350 222 14 459 780 68 401 4.13e-16 82.0
Msa1330690 AT1G21480.2 25.714 315 179 13 120 403 84 374 6.82e-15 78.2
Msa1330690 AT1G21480.1 23.577 369 242 14 459 803 68 420 1.03e-15 81.3
Msa1330690 AT1G21480.1 25.212 353 208 13 120 440 84 412 2.75e-15 79.7
Msa1330690 AT3G03650.1 25.000 320 203 9 143 439 158 463 3.80e-15 79.7
Msa1330690 AT3G03650.1 24.765 319 205 10 498 794 158 463 4.31e-14 76.3
Msa1330690 AT3G45400.1 28.390 236 154 8 581 806 206 436 1.94e-14 77.4
Msa1330690 AT3G45400.1 28.521 284 172 11 175 442 159 427 9.28e-14 75.1
Msa1330690 AT5G44930.2 26.708 322 195 14 174 483 130 422 1.51e-13 74.3
Msa1330690 AT5G44930.2 26.160 237 130 9 580 790 175 392 3.92e-11 66.6
Msa1330690 AT5G44930.1 26.708 322 195 14 174 483 130 422 1.51e-13 74.3
Msa1330690 AT5G44930.1 26.160 237 130 9 580 790 175 392 3.92e-11 66.6
Msa1330690 AT3G57630.2 25.397 315 180 8 525 787 405 716 6.25e-13 73.2
Msa1330690 AT3G57630.3 25.397 315 180 8 525 787 407 718 6.53e-13 73.2
Msa1330690 AT3G57630.1 25.397 315 180 8 525 787 407 718 6.53e-13 73.2
Msa1330690 AT1G34270.1 28.716 296 174 13 175 445 144 427 1.61e-12 71.2
Msa1330690 AT5G44930.3 26.866 268 165 11 174 427 130 380 3.50e-12 69.7

Find 163 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGCTACTGTTTGCTTTA+TGG 0.100371 8_4:-49932886 None:intergenic
GCTAAGATTGTTCGGTTATT+AGG 0.113139 8_4:-49938232 None:intergenic
GGATTTGCATCTGAGATTTC+TGG 0.154159 8_4:-49934649 None:intergenic
ATCAATGAATTGACCTTCTA+TGG 0.170506 8_4:-49937699 None:intergenic
TAGCATAAAGAGCCCCTTTA+AGG 0.188086 8_4:+49933656 Msa1330690:CDS
ATGGAATATTTGTTGTTTAC+AGG 0.206569 8_4:-49937680 None:intergenic
CTGAAGGGTTCCAGCCTAAA+AGG 0.211097 8_4:+49934719 Msa1330690:CDS
TCAAAACTATACACAATTAA+TGG 0.213424 8_4:+49934933 Msa1330690:CDS
TGTAAAATAGTCTTAATTTC+TGG 0.218912 8_4:-49938553 None:intergenic
TTGCTGATAAGTATCCTTAT+TGG 0.220100 8_4:+49933823 Msa1330690:CDS
TTAATTGCTTCCACAATTCT+TGG 0.224629 8_4:-49935003 None:intergenic
ACTAGGGTGCTTAGCCTTAA+AGG 0.225671 8_4:-49933670 None:intergenic
ACCACATTTGCAACACTAAA+AGG 0.233973 8_4:-49933714 None:intergenic
TATCTCTTCACTTCTCAAAA+AGG 0.261530 8_4:+49932740 Msa1330690:CDS
AGTCAATTCTCCATGGAAAT+TGG 0.270904 8_4:+49938517 Msa1330690:CDS
AAAGTTAGGCCCACCAAATC+TGG 0.280032 8_4:+49934777 Msa1330690:CDS
TAAGCCAATTATGTCCAAAA+AGG 0.281177 8_4:+49933749 Msa1330690:CDS
TTCTCCTCTCTTGTCATGAC+TGG 0.282575 8_4:+49933871 Msa1330690:CDS
TGGTGAAGAGATTGAAGATA+TGG 0.283644 8_4:+49933541 Msa1330690:CDS
CTAAGATTGTTCGGTTATTA+GGG 0.296027 8_4:-49938231 None:intergenic
TCTTCCTTTCAGTGTGTCTA+AGG 0.305484 8_4:+49937787 Msa1330690:CDS
TTCTGCTTTCATGCCATGAT+TGG 0.310677 8_4:+49937948 Msa1330690:CDS
TAATCTGATCTAGACCTTCT+AGG 0.312051 8_4:-49937830 None:intergenic
AAGAAAACATGGGCCAATTC+AGG 0.312175 8_4:-49937764 None:intergenic
GAGAAAGAATATGACTAGTT+TGG 0.322408 8_4:+49937277 Msa1330690:CDS
TTGCAAACAAGTATCCTTAC+TGG 0.323012 8_4:+49937900 Msa1330690:CDS
TTTGTATAATCTTGACCTTT+TGG 0.324099 8_4:-49938349 None:intergenic
ATGAAGTACTTGAAGAGTTT+AGG 0.325716 8_4:-49938094 None:intergenic
GCTAATGTGGTTCTGTTTGA+TGG 0.329668 8_4:-49934808 None:intergenic
TAAAGCAAACAGTAGCATTA+AGG 0.331229 8_4:+49932889 Msa1330690:CDS
TTAGGGTGTTGGTCCGTATT+AGG 0.344378 8_4:-49938214 None:intergenic
ATATGATACTTCACTCTGTT+TGG 0.352586 8_4:+49938677 Msa1330690:CDS
CCATTACTTCTATTCCAATA+AGG 0.353414 8_4:-49933837 None:intergenic
ATCAAATCAAATGGCTTTGC+TGG 0.355073 8_4:-49938652 None:intergenic
GAAAATTGTTACTAAATCAT+TGG 0.357368 8_4:+49934863 Msa1330690:CDS
GGATAGAGTTGAAGAAAGTT+TGG 0.364095 8_4:+49933028 Msa1330690:CDS
CAATTAAGCACATCACTAAA+AGG 0.364678 8_4:-49938493 None:intergenic
CCAACTGGTAAGTACACTTC+AGG 0.370355 8_4:-49934754 None:intergenic
CAAAACTATACACAATTAAT+GGG 0.375555 8_4:+49934934 Msa1330690:CDS
AACTCTTCAAGTACTTCATC+AGG 0.375868 8_4:+49938098 Msa1330690:CDS
GATGGGCTTTGGCCCAGATT+TGG 0.381038 8_4:-49934790 None:intergenic
TTCGAGAAGCAATTCTTTCA+AGG 0.382330 8_4:+49933069 Msa1330690:CDS
AACAACAAATATTCCATAGA+AGG 0.388076 8_4:+49937686 Msa1330690:CDS
TGGTTCTGTTTGATGGGCTT+TGG 0.388867 8_4:-49934801 None:intergenic
TAAATTGCTTCCACCACTCT+TGG 0.394443 8_4:-49938427 None:intergenic
CTAGGGTGCTTAGCCTTAAA+GGG 0.394806 8_4:-49933669 None:intergenic
CTTTCAATGATGTGTTGAAT+TGG 0.396648 8_4:+49935070 Msa1330690:CDS
GGCTTTGGCCCAGATTTGGT+GGG 0.396783 8_4:-49934786 None:intergenic
TTCTGTAGATGGACCCTCTT+GGG 0.399902 8_4:-49933130 None:intergenic
CAAGGCAACTCATCCTGAAT+TGG 0.402788 8_4:+49937751 Msa1330690:CDS
AATGGTCCATCATGTACTAT+TGG 0.409324 8_4:-49933585 None:intergenic
CATGGCATGAAAGCAGAAAA+TGG 0.410042 8_4:-49937943 None:intergenic
TGGTGAAGAGATTCAAGGTA+TGG 0.410347 8_4:+49937618 Msa1330690:CDS
TATTACAGAAACAAAGTATA+GGG 0.414924 8_4:+49938579 Msa1330690:CDS
TCAGGATGAGTTGCCTTGAA+TGG 0.417478 8_4:-49937746 None:intergenic
GGGCTTTGGCCCAGATTTGG+TGG 0.426206 8_4:-49934787 None:intergenic
ATTGCATATATGTTGTTCAA+TGG 0.428434 8_4:-49933603 None:intergenic
AATTTGCCTGTTGGAAAGCT+TGG 0.429513 8_4:+49938187 Msa1330690:CDS
CATGACAAGAGAGGAGAAAA+TGG 0.431578 8_4:-49933866 None:intergenic
TCAAGATTATACAAAGTTGA+TGG 0.431813 8_4:+49938357 Msa1330690:CDS
TCTGCTTTCATGCCATGATT+GGG 0.454591 8_4:+49937949 Msa1330690:CDS
ATATTACAGAAACAAAGTAT+AGG 0.455175 8_4:+49938578 Msa1330690:CDS
AAGAATTGCTTCTCGAATTG+AGG 0.456346 8_4:-49933063 None:intergenic
TACTTACCAGTTGGAAAGTT+AGG 0.456933 8_4:+49934763 Msa1330690:CDS
AAAGCTTGGCCCACCTAATA+CGG 0.457453 8_4:+49938201 Msa1330690:CDS
ATCATATGTATCAAATCAAA+TGG 0.460833 8_4:-49938661 None:intergenic
GCTATGTTTACAAGCCTAGA+AGG 0.461991 8_4:+49937816 Msa1330690:CDS
CTAATGTGGTTCTGTTTGAT+GGG 0.466560 8_4:-49934807 None:intergenic
TTTCTGTAGATGGACCCTCT+TGG 0.471285 8_4:-49933131 None:intergenic
CTTGCCACTTCATGTCCACT+AGG 0.472231 8_4:-49938403 None:intergenic
ATCATGTGCATCACATCAAA+AGG 0.472300 8_4:-49935237 None:intergenic
GCAGAAAATTATGACTAGCT+TGG 0.478762 8_4:+49933007 Msa1330690:intron
GGTGGGCCTAACTTTCCAAC+TGG 0.479077 8_4:-49934769 None:intergenic
CCTCAGTTGAATTTGCCTGT+TGG 0.479114 8_4:+49938178 Msa1330690:CDS
AACAACATATATGCAATTGA+AGG 0.484931 8_4:+49933609 Msa1330690:CDS
TGCAATGCAAACACTTCTGA+AGG 0.485857 8_4:+49934703 Msa1330690:CDS
GGAATTACAGTACTACTTCA+AGG 0.486167 8_4:+49933090 Msa1330690:CDS
TCTCCTCTCTTGTCATGACT+GGG 0.487831 8_4:+49933872 Msa1330690:CDS
CCTTGACTTCTGTTCCAGTA+AGG 0.489828 8_4:-49937914 None:intergenic
GGATTAGCATAAGAAACTCT+TGG 0.489867 8_4:-49938073 None:intergenic
GGTGGGCCAAGCTTTCCAAC+AGG 0.495256 8_4:-49938193 None:intergenic
CATTGATTCAGAAAGCAATT+CGG 0.499790 8_4:+49937333 Msa1330690:CDS
AGTTTGGAGAGGATTGAAGA+AGG 0.501327 8_4:+49937293 Msa1330690:CDS
ATCACATCAAAAGGCTTAGC+AGG 0.501383 8_4:-49935228 None:intergenic
GGGATGGACACATCTCTGTT+AGG 0.505237 8_4:-49938157 None:intergenic
GGGTGTTGGTCCGTATTAGG+TGG 0.506106 8_4:-49938211 None:intergenic
TGAAGGGTTCCAGCCTAAAA+GGG 0.509729 8_4:+49934720 Msa1330690:CDS
AAGTAACAAGAGTCCATTCA+AGG 0.512022 8_4:+49937733 Msa1330690:CDS
ATGGGCCCCACCAGAAAAGA+AGG 0.516521 8_4:-49934830 None:intergenic
CAACTGGTAAGTACACTTCA+GGG 0.516975 8_4:-49934753 None:intergenic
GTGGTGGAAGCAATTTATGC+AGG 0.521001 8_4:+49938433 Msa1330690:CDS
TCTATCAACTCCAATTTCCA+TGG 0.521840 8_4:-49938527 None:intergenic
GGTGAAGAGATTGAAGATAT+GGG 0.523274 8_4:+49933542 Msa1330690:CDS
AAGATATGGGTATACAAAGA+AGG 0.523825 8_4:+49933555 Msa1330690:CDS
TTTATGCTAGGAAGAGAGAA+AGG 0.525025 8_4:-49932788 None:intergenic
GAGAAGTGAAGAGATAAGTG+AGG 0.525419 8_4:-49932733 None:intergenic
TGCAATGCCAACACCTCAGA+AGG 0.539598 8_4:+49938127 Msa1330690:CDS
GTTCATGAGTACCTTCCAAA+AGG 0.540735 8_4:+49938334 Msa1330690:CDS
ATTGTGAACCTACCCAATCA+TGG 0.544637 8_4:-49937961 None:intergenic
GGAGATGGTGAAGAGATTCA+AGG 0.550146 8_4:+49937613 Msa1330690:CDS
CTAGCCACTTCATATCCACT+TGG 0.551352 8_4:-49934979 None:intergenic
TTGTTCGGTTATTAGGGTGT+TGG 0.552565 8_4:-49938225 None:intergenic
CCTTATTGGAATAGAAGTAA+TGG 0.555785 8_4:+49933837 Msa1330690:CDS
ATTGTTACTAAATCATTGGA+AGG 0.556809 8_4:+49934867 Msa1330690:CDS
ATTCAAGGTATGGGTATACA+AGG 0.558498 8_4:+49937628 Msa1330690:CDS
ATTGTGGAAGCAATTAATGC+TGG 0.559680 8_4:+49935009 Msa1330690:CDS
GTTCATGAGTATCTTCCAAA+GGG 0.560213 8_4:+49934910 Msa1330690:CDS
AAGTTAGGCCCACCAAATCT+GGG 0.562454 8_4:+49934778 Msa1330690:CDS
AGTTCATGAGTATCTTCCAA+AGG 0.571921 8_4:+49934909 Msa1330690:CDS
GGTGAAGAGATTCAAGGTAT+GGG 0.573087 8_4:+49937619 Msa1330690:CDS
GAGCAACCATTGGTACATGA+TGG 0.574458 8_4:+49937656 Msa1330690:CDS
AATCAGGAGCCACATGGAGA+TGG 0.574643 8_4:+49933521 Msa1330690:intron
ACAGGTCCATCATGTACCAA+TGG 0.576004 8_4:-49937662 None:intergenic
AAGCAGGAGCCACATGGAGA+TGG 0.576054 8_4:+49937598 Msa1330690:intron
CAACAGGCAAATTCAACTGA+GGG 0.577993 8_4:-49938177 None:intergenic
CAAGATTATACAAAGTTGAT+GGG 0.579273 8_4:+49938358 Msa1330690:CDS
CCTGAAGTGTACTTACCAGT+TGG 0.580840 8_4:+49934754 Msa1330690:CDS
AGAATATGACTAGTTTGGAG+AGG 0.583515 8_4:+49937282 Msa1330690:CDS
TAATTGGAGTCAATTCTCCA+TGG 0.589312 8_4:+49938510 Msa1330690:CDS
CAACACATCATTGAAAGGCA+AGG 0.592964 8_4:-49935064 None:intergenic
ACCAGAAAAGAAGGCTAATG+TGG 0.593736 8_4:-49934821 None:intergenic
CCGTGACAGACTTCATAGAA+TGG 0.594603 8_4:+49933779 Msa1330690:CDS
CCCCTAAAGCAGGAGCCACA+TGG 0.595531 8_4:+49937592 Msa1330690:intron
CAATTCAACACATCATTGAA+AGG 0.595885 8_4:-49935069 None:intergenic
TGAAAGGAAGAAAGAAAACA+TGG 0.600510 8_4:-49937775 None:intergenic
GGTGTTGGTCCGTATTAGGT+GGG 0.600847 8_4:-49938210 None:intergenic
CAGACTTCATAGAATGGTGG+AGG 0.601253 8_4:+49933785 Msa1330690:CDS
AAAATATGTGTGCCTCACTA+GGG 0.603230 8_4:-49933686 None:intergenic
AGTGGCTAGTCCAAGAATTG+TGG 0.603331 8_4:+49934993 Msa1330690:CDS
TAATTGTCACAAATTATCAC+TGG 0.605632 8_4:-49938463 None:intergenic
GAAACATCGTAAAGCCTCCA+TGG 0.606559 8_4:-49932678 None:intergenic
AAAGTTGCTCAAGAGTTGGA+AGG 0.607979 8_4:+49938291 Msa1330690:CDS
AAGGTATGGGTATACAAGGA+AGG 0.608922 8_4:+49937632 Msa1330690:CDS
GAGCAACCAATAGTACATGA+TGG 0.611429 8_4:+49933579 Msa1330690:CDS
GATCAGATTATGATCCTCAT+CGG 0.612394 8_4:+49937843 Msa1330690:CDS
GCTCAAGAGTTGGAAGGACA+AGG 0.614766 8_4:+49938297 Msa1330690:CDS
AGGCAAATTCAACTGAGGGA+TGG 0.618149 8_4:-49938173 None:intergenic
CCTTACTGGAACAGAAGTCA+AGG 0.623942 8_4:+49937914 Msa1330690:CDS
TAATTCTGAGAAATAATCAC+AGG 0.625097 8_4:-49935039 None:intergenic
TGAAGTGGCAAGTCCAAGAG+TGG 0.628625 8_4:+49938414 Msa1330690:CDS
ATCTCTTCACCATCTCCATG+TGG 0.632190 8_4:-49933530 None:intergenic
CAAGGAAGGAGAGCAACCAT+TGG 0.632800 8_4:+49937646 Msa1330690:CDS
TATGAAAATCAGGAGCCACA+TGG 0.634197 8_4:+49933515 Msa1330690:intron
CCATTCTATGAAGTCTGTCA+CGG 0.635986 8_4:-49933779 None:intergenic
GCAATGCAAACACTTCTGAA+GGG 0.639377 8_4:+49934704 Msa1330690:CDS
TAAGGCTAAGCACCCTAGTG+AGG 0.639574 8_4:+49933674 Msa1330690:CDS
CATTTGCAACACTAAAAGGA+AGG 0.639783 8_4:-49933710 None:intergenic
ATCTCTTCACCATCTCCATG+TGG 0.641124 8_4:-49937607 None:intergenic
CCAACAGGCAAATTCAACTG+AGG 0.641348 8_4:-49938178 None:intergenic
AGTGGCAAGTCCAAGAGTGG+TGG 0.644424 8_4:+49938417 Msa1330690:CDS
TTGCCACTTCATGTCCACTA+GGG 0.651832 8_4:-49938402 None:intergenic
GTGCCCTAGTGGACATGAAG+TGG 0.657996 8_4:+49938399 Msa1330690:CDS
TAGGGTGCTTAGCCTTAAAG+GGG 0.661969 8_4:-49933668 None:intergenic
ACTCTTCAAGTACTTCATCA+GGG 0.662235 8_4:+49938099 Msa1330690:CDS
ATGACCTTAGACACACTGAA+AGG 0.663561 8_4:-49937791 None:intergenic
ACTAAAAGCTGTAACCGATG+AGG 0.669918 8_4:-49937857 None:intergenic
TTGTGGAAGCAATTAATGCT+GGG 0.670500 8_4:+49935010 Msa1330690:CDS
TTATAAGTCAGAAACTGATG+AGG 0.671606 8_4:-49932842 None:intergenic
GTGTCCAAGTGGATATGAAG+TGG 0.679823 8_4:+49934975 Msa1330690:CDS
GAAAGGAAGAAAGAAAACAT+GGG 0.682085 8_4:-49937774 None:intergenic
TGACAGACTTCATAGAATGG+TGG 0.684701 8_4:+49933782 Msa1330690:CDS
TTACCCAGTCATGACAAGAG+AGG 0.688491 8_4:-49933875 None:intergenic
ATTACAGTACTACTTCAAGG+AGG 0.793495 8_4:+49933093 Msa1330690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTAATGATAATAATAAT+TGG - chr8_4:49933461-49933480 None:intergenic 10.0%
!! GCAAAATAAAATAAAAAATA+GGG - chr8_4:49934353-49934372 None:intergenic 10.0%
!! AGCAAAATAAAATAAAAAAT+AGG - chr8_4:49934354-49934373 None:intergenic 10.0%
!!! TTTAACTTATATATTAATAC+GGG - chr8_4:49935794-49935813 None:intergenic 10.0%
!!! CTTTAACTTATATATTAATA+CGG - chr8_4:49935795-49935814 None:intergenic 10.0%
!! ATGTAAGAATTAAAAAAAAT+AGG + chr8_4:49935824-49935843 Msa1330690:intron 10.0%
!! ATAAGATAAGATTATTTATT+TGG + chr8_4:49936595-49936614 Msa1330690:intron 10.0%
!!! ATTTTTATAGTAATTTAAGT+AGG - chr8_4:49937561-49937580 None:intergenic 10.0%
!! ATGAAATAGAAACTTTAATT+TGG - chr8_4:49932978-49932997 None:intergenic 15.0%
!! ATAATAATAATTGGTTATCA+AGG - chr8_4:49933452-49933471 None:intergenic 15.0%
!!! CATAATTTTAGAAAAAAACA+AGG - chr8_4:49933499-49933518 None:intergenic 15.0%
!!! TTTCTAAAATTATGAAAATC+AGG + chr8_4:49933505-49933524 Msa1330690:intron 15.0%
!! AAAAAAACAATACTAATTAG+TGG + chr8_4:49934062-49934081 Msa1330690:intron 15.0%
!!! GTTTTTCTAAAAATACATTA+TGG - chr8_4:49934398-49934417 None:intergenic 15.0%
!!! AAAGCATTTTATTTAAACTT+TGG - chr8_4:49934606-49934625 None:intergenic 15.0%
!! TTAACTTATATATTAATACG+GGG - chr8_4:49935793-49935812 None:intergenic 15.0%
!!! TTTTACTCATATATTAGTAA+CGG - chr8_4:49935852-49935871 None:intergenic 15.0%
!!! AACTAAAGTTATTTTATACA+TGG + chr8_4:49936857-49936876 Msa1330690:intron 15.0%
!!! TTTATTTTTTGTTTTCAGTT+TGG + chr8_4:49937248-49937267 Msa1330690:intron 15.0%
!!! TATTTTCAAAATGTACATGA+TGG - chr8_4:49934025-49934044 None:intergenic 20.0%
!!! ATTATTGATTGTAGTGAATT+TGG + chr8_4:49934312-49934331 Msa1330690:intron 20.0%
!!! AATGTATTTTTAGAAAAACC+TGG + chr8_4:49934399-49934418 Msa1330690:intron 20.0%
!!! TTTACTTTACTTGATAATTC+AGG + chr8_4:49934624-49934643 Msa1330690:intron 20.0%
!!! GATTTAGTAACAATTTTCTA+AGG - chr8_4:49934861-49934880 None:intergenic 20.0%
!! GAAAATTGTTACTAAATCAT+TGG + chr8_4:49934863-49934882 Msa1330690:CDS 20.0%
!! TCAAAACTATACACAATTAA+TGG + chr8_4:49934933-49934952 Msa1330690:CDS 20.0%
!! CAAAACTATACACAATTAAT+GGG + chr8_4:49934934-49934953 Msa1330690:CDS 20.0%
!!! AAAAGCATTTTGTTATGAAT+AGG + chr8_4:49935205-49935224 Msa1330690:CDS 20.0%
!! AATTAACTACTAACATTTGT+CGG - chr8_4:49935417-49935436 None:intergenic 20.0%
!! TTTACTCATATATTAGTAAC+GGG - chr8_4:49935851-49935870 None:intergenic 20.0%
!! TTTAACTCGTATATTAATAC+AGG - chr8_4:49935911-49935930 None:intergenic 20.0%
!! ATAACTCATATCAAATTACA+TGG - chr8_4:49936099-49936118 None:intergenic 20.0%
!! TAATTTGATATGAGTTATCT+TGG + chr8_4:49936101-49936120 Msa1330690:intron 20.0%
!! GTAAACATTATGTATTCAAT+TGG + chr8_4:49936169-49936188 Msa1330690:intron 20.0%
!!! ATTAAGCATCTACTAAATTT+TGG - chr8_4:49936409-49936428 None:intergenic 20.0%
!! CAAACAATGTAACAAATAAA+TGG - chr8_4:49936501-49936520 None:intergenic 20.0%
!!! TAAAGTTATTTTATACATGG+AGG + chr8_4:49936860-49936879 Msa1330690:intron 20.0%
!! AAAATACAAGGAAAAAATTG+AGG - chr8_4:49936991-49937010 None:intergenic 20.0%
!!! ATATTAAAAAGTGCTAAAGA+AGG - chr8_4:49937055-49937074 None:intergenic 20.0%
!!! TTAGCACTTTTTAATATCAA+AGG + chr8_4:49937058-49937077 Msa1330690:intron 20.0%
!! ACAATAATATAAGTCAAACA+TGG + chr8_4:49937158-49937177 Msa1330690:intron 20.0%
!! GTGTTATAATTAAACTTAAC+TGG - chr8_4:49937436-49937455 None:intergenic 20.0%
!!! TGTAAAATAGTCTTAATTTC+TGG - chr8_4:49938556-49938575 None:intergenic 20.0%
!! ATATTACAGAAACAAAGTAT+AGG + chr8_4:49938578-49938597 Msa1330690:CDS 20.0%
!! TATTACAGAAACAAAGTATA+GGG + chr8_4:49938579-49938598 Msa1330690:CDS 20.0%
!! ATCATATGTATCAAATCAAA+TGG - chr8_4:49938664-49938683 None:intergenic 20.0%
!! TTATTCATGTCTTTTATGCT+AGG - chr8_4:49932803-49932822 None:intergenic 25.0%
!!! CAGACAACTTTTTAAAACAT+TGG + chr8_4:49933399-49933418 Msa1330690:intron 25.0%
!!! TTATCAAGGTTTTAAATTGC+AGG - chr8_4:49933438-49933457 None:intergenic 25.0%
! ATTGCATATATGTTGTTCAA+TGG - chr8_4:49933606-49933625 None:intergenic 25.0%
! AACAACATATATGCAATTGA+AGG + chr8_4:49933609-49933628 Msa1330690:CDS 25.0%
!! AAATCCTTTTTGGACATAAT+TGG - chr8_4:49933756-49933775 None:intergenic 25.0%
!! AGTGGAAAAAGTATATACAA+TGG + chr8_4:49934080-49934099 Msa1330690:intron 25.0%
! TATGTATTGTCGATAAAGAT+CGG + chr8_4:49934136-49934155 Msa1330690:intron 25.0%
! ATTGTTACTAAATCATTGGA+AGG + chr8_4:49934867-49934886 Msa1330690:CDS 25.0%
!! TAATTCTGAGAAATAATCAC+AGG - chr8_4:49935042-49935061 None:intergenic 25.0%
! ACATGATACTTCATTCAATT+TGG + chr8_4:49935253-49935272 Msa1330690:intron 25.0%
! CATGGAAATAAATTCAGAAT+AGG - chr8_4:49936081-49936100 None:intergenic 25.0%
! GCAATAGAAATGTTAAGTTA+AGG + chr8_4:49936429-49936448 Msa1330690:intron 25.0%
! TTTGTTACATTGTTTGCTTA+CGG + chr8_4:49936505-49936524 Msa1330690:intron 25.0%
!! TCATCATACGTTCTTTTTAT+CGG - chr8_4:49936782-49936801 None:intergenic 25.0%
!! TATAAGTCAAACATGGATTA+AGG + chr8_4:49937165-49937184 Msa1330690:intron 25.0%
!! TATTCAACCTTGATAATCTT+TGG + chr8_4:49937195-49937214 Msa1330690:intron 25.0%
!!! ATGGAATATTTGTTGTTTAC+AGG - chr8_4:49937683-49937702 None:intergenic 25.0%
! AACAACAAATATTCCATAGA+AGG + chr8_4:49937686-49937705 Msa1330690:CDS 25.0%
! CAAAAAAAGCTAAGATTGTT+CGG - chr8_4:49938243-49938262 None:intergenic 25.0%
!! TTTGTATAATCTTGACCTTT+TGG - chr8_4:49938352-49938371 None:intergenic 25.0%
! TCAAGATTATACAAAGTTGA+TGG + chr8_4:49938357-49938376 Msa1330690:CDS 25.0%
!! CAAGATTATACAAAGTTGAT+GGG + chr8_4:49938358-49938377 Msa1330690:CDS 25.0%
! TAATTGTCACAAATTATCAC+TGG - chr8_4:49938466-49938485 None:intergenic 25.0%
TATCTCTTCACTTCTCAAAA+AGG + chr8_4:49932740-49932759 Msa1330690:CDS 30.0%
AGAGAAAGGAAAAACAAAGA+AGG - chr8_4:49932777-49932796 None:intergenic 30.0%
TTATAAGTCAGAAACTGATG+AGG - chr8_4:49932845-49932864 None:intergenic 30.0%
TAATGCTACTGTTTGCTTTA+TGG - chr8_4:49932889-49932908 None:intergenic 30.0%
TAAAGCAAACAGTAGCATTA+AGG + chr8_4:49932889-49932908 Msa1330690:CDS 30.0%
! CTTAACTGATGAAAAGCATA+TGG - chr8_4:49933158-49933177 None:intergenic 30.0%
TGCAGTATATATCAAAGTCT+TGG - chr8_4:49933292-49933311 None:intergenic 30.0%
AAGATATGGGTATACAAAGA+AGG + chr8_4:49933555-49933574 Msa1330690:CDS 30.0%
TAAGCCAATTATGTCCAAAA+AGG + chr8_4:49933749-49933768 Msa1330690:CDS 30.0%
TTGCTGATAAGTATCCTTAT+TGG + chr8_4:49933823-49933842 Msa1330690:CDS 30.0%
CCATTACTTCTATTCCAATA+AGG - chr8_4:49933840-49933859 None:intergenic 30.0%
CCTTATTGGAATAGAAGTAA+TGG + chr8_4:49933837-49933856 Msa1330690:CDS 30.0%
GTTATATGATCTCTATCCAA+TGG + chr8_4:49934254-49934273 Msa1330690:intron 30.0%
TGTAGTGAATTTGGTTATGA+AGG + chr8_4:49934321-49934340 Msa1330690:intron 30.0%
GTAGTGAATTTGGTTATGAA+GGG + chr8_4:49934322-49934341 Msa1330690:intron 30.0%
!! AAATTTTGTTTGTGTCCAAG+TGG + chr8_4:49934964-49934983 Msa1330690:CDS 30.0%
TTAATTGCTTCCACAATTCT+TGG - chr8_4:49935006-49935025 None:intergenic 30.0%
CAATTCAACACATCATTGAA+AGG - chr8_4:49935072-49935091 None:intergenic 30.0%
CTTTCAATGATGTGTTGAAT+TGG + chr8_4:49935070-49935089 Msa1330690:CDS 30.0%
ACAAAAGCAAATGATTTCAC+TGG + chr8_4:49936207-49936226 Msa1330690:intron 30.0%
CAAAAGCAAATGATTTCACT+GGG + chr8_4:49936208-49936227 Msa1330690:intron 30.0%
TAACAGGTGAAACATTAATC+AGG - chr8_4:49936264-49936283 None:intergenic 30.0%
ACGAATTTCATTCAATCAAC+AGG - chr8_4:49936748-49936767 None:intergenic 30.0%
TAAAAAGAACGTATGATGAG+AGG + chr8_4:49936783-49936802 Msa1330690:intron 30.0%
TACAAGGAAAAAATTGAGGA+AGG - chr8_4:49936987-49937006 None:intergenic 30.0%
TTGAAGGAGTGAAAAATACA+AGG - chr8_4:49937003-49937022 None:intergenic 30.0%
ATCCTATGATCTTCATTTGA+AGG - chr8_4:49937019-49937038 None:intergenic 30.0%
! CACTTTTCCAAAGATTATCA+AGG - chr8_4:49937205-49937224 None:intergenic 30.0%
!! TTTGTTTTCAGTTTGGTCAT+AGG + chr8_4:49937255-49937274 Msa1330690:intron 30.0%
! GAGAAAGAATATGACTAGTT+TGG + chr8_4:49937277-49937296 Msa1330690:CDS 30.0%
!! CATTGATTCAGAAAGCAATT+CGG + chr8_4:49937333-49937352 Msa1330690:CDS 30.0%
!!! AAACAGAGTTTTGTTCCAAA+AGG + chr8_4:49937380-49937399 Msa1330690:intron 30.0%
!!! AACAGAGTTTTGTTCCAAAA+GGG + chr8_4:49937381-49937400 Msa1330690:intron 30.0%
ATCAATGAATTGACCTTCTA+TGG - chr8_4:49937702-49937721 None:intergenic 30.0%
GAAAGGAAGAAAGAAAACAT+GGG - chr8_4:49937777-49937796 None:intergenic 30.0%
TGAAAGGAAGAAAGAAAACA+TGG - chr8_4:49937778-49937797 None:intergenic 30.0%
GATAATGAAAGCTCAGAAAA+TGG - chr8_4:49937991-49938010 None:intergenic 30.0%
TAAGTCTATGTGATGTGATA+AGG + chr8_4:49938022-49938041 Msa1330690:intron 30.0%
! ATGAAGTACTTGAAGAGTTT+AGG - chr8_4:49938097-49938116 None:intergenic 30.0%
CTAAGATTGTTCGGTTATTA+GGG - chr8_4:49938234-49938253 None:intergenic 30.0%
!!! ACAATCTTAGCTTTTTTTGC+TGG + chr8_4:49938244-49938263 Msa1330690:CDS 30.0%
! TATAATCTTGACCTTTTGGA+AGG - chr8_4:49938348-49938367 None:intergenic 30.0%
CAATTAAGCACATCACTAAA+AGG - chr8_4:49938496-49938515 None:intergenic 30.0%
! CTTTTAGTGATGTGCTTAAT+TGG + chr8_4:49938494-49938513 Msa1330690:CDS 30.0%
!!! GAAAGCATTTTCAGATGAAT+AGG + chr8_4:49938629-49938648 Msa1330690:CDS 30.0%
ATATGATACTTCACTCTGTT+TGG + chr8_4:49938677-49938696 Msa1330690:CDS 30.0%
! GGCTTAGACGTTTAAATTTT+AGG + chr8_4:49938698-49938717 Msa1330690:CDS 30.0%
TTTATGCTAGGAAGAGAGAA+AGG - chr8_4:49932791-49932810 None:intergenic 35.0%
! GCAGAAAATTATGACTAGCT+TGG + chr8_4:49933007-49933026 Msa1330690:intron 35.0%
GGATAGAGTTGAAGAAAGTT+TGG + chr8_4:49933028-49933047 Msa1330690:CDS 35.0%
AAGAATTGCTTCTCGAATTG+AGG - chr8_4:49933066-49933085 None:intergenic 35.0%
TTCGAGAAGCAATTCTTTCA+AGG + chr8_4:49933069-49933088 Msa1330690:CDS 35.0%
GGAATTACAGTACTACTTCA+AGG + chr8_4:49933090-49933109 Msa1330690:CDS 35.0%
ATTACAGTACTACTTCAAGG+AGG + chr8_4:49933093-49933112 Msa1330690:CDS 35.0%
AGCATATGGATTTCTGTAGA+TGG - chr8_4:49933144-49933163 None:intergenic 35.0%
TGGTGAAGAGATTGAAGATA+TGG + chr8_4:49933541-49933560 Msa1330690:CDS 35.0%
GGTGAAGAGATTGAAGATAT+GGG + chr8_4:49933542-49933561 Msa1330690:CDS 35.0%
AATGGTCCATCATGTACTAT+TGG - chr8_4:49933588-49933607 None:intergenic 35.0%
AAAATATGTGTGCCTCACTA+GGG - chr8_4:49933689-49933708 None:intergenic 35.0%
AAAAATATGTGTGCCTCACT+AGG - chr8_4:49933690-49933709 None:intergenic 35.0%
CATTTGCAACACTAAAAGGA+AGG - chr8_4:49933713-49933732 None:intergenic 35.0%
! TCCTTTTAGTGTTGCAAATG+TGG + chr8_4:49933713-49933732 Msa1330690:CDS 35.0%
ACCACATTTGCAACACTAAA+AGG - chr8_4:49933717-49933736 None:intergenic 35.0%
! TATAGTTCTTTTCTGACACC+AGG - chr8_4:49934420-49934439 None:intergenic 35.0%
! AAGGCATTTATTCTATCTGC+AGG - chr8_4:49934467-49934486 None:intergenic 35.0%
GATAGAATAAATGCCTTGCT+TGG + chr8_4:49934470-49934489 Msa1330690:intron 35.0%
GAAATATGAATCTCCAAGCA+AGG - chr8_4:49934486-49934505 None:intergenic 35.0%
AGACTAATTGAACTGCAGAA+TGG - chr8_4:49934521-49934540 None:intergenic 35.0%
!! GTGAAGTTTTTGAAGAGGTT+TGG - chr8_4:49934673-49934692 None:intergenic 35.0%
!! CTCTTGTGAAGTTTTTGAAG+AGG - chr8_4:49934678-49934697 None:intergenic 35.0%
TACTTACCAGTTGGAAAGTT+AGG + chr8_4:49934763-49934782 Msa1330690:CDS 35.0%
! CTAATGTGGTTCTGTTTGAT+GGG - chr8_4:49934810-49934829 None:intergenic 35.0%
!!! CAATTTTCTAAGGTCACCAT+GGG - chr8_4:49934851-49934870 None:intergenic 35.0%
!!! ACAATTTTCTAAGGTCACCA+TGG - chr8_4:49934852-49934871 None:intergenic 35.0%
AGTTCATGAGTATCTTCCAA+AGG + chr8_4:49934909-49934928 Msa1330690:CDS 35.0%
GTTCATGAGTATCTTCCAAA+GGG + chr8_4:49934910-49934929 Msa1330690:CDS 35.0%
!!! TGTGTATAGTTTTGACCCTT+TGG - chr8_4:49934928-49934947 None:intergenic 35.0%
ATTGTGGAAGCAATTAATGC+TGG + chr8_4:49935009-49935028 Msa1330690:CDS 35.0%
TTGTGGAAGCAATTAATGCT+GGG + chr8_4:49935010-49935029 Msa1330690:CDS 35.0%
! GAATTGGAGTGAATTTTCAG+TGG + chr8_4:49935086-49935105 Msa1330690:CDS 35.0%
! ATCTCTACTATTTTCTCCAC+TGG - chr8_4:49935117-49935136 None:intergenic 35.0%
ATCATGTGCATCACATCAAA+AGG - chr8_4:49935240-49935259 None:intergenic 35.0%
TATATCCAAACTTGCCTCAA+GGG - chr8_4:49935345-49935364 None:intergenic 35.0%
TAACAGTCCTAATGTAACCA+TGG + chr8_4:49936232-49936251 Msa1330690:intron 35.0%
AGGACACTAGAAAGATCAAA+GGG - chr8_4:49936967-49936986 None:intergenic 35.0%
AAGGACACTAGAAAGATCAA+AGG - chr8_4:49936968-49936987 None:intergenic 35.0%
CTCCTTCAAATGAAGATCAT+AGG + chr8_4:49937014-49937033 Msa1330690:intron 35.0%
CTCTTTACCTCTTCAAACAA+TGG + chr8_4:49937130-49937149 Msa1330690:intron 35.0%
!! AGAATATGACTAGTTTGGAG+AGG + chr8_4:49937282-49937301 Msa1330690:CDS 35.0%
AACAAAACTCTGTTTCATGG+TGG - chr8_4:49937375-49937394 None:intergenic 35.0%
TGGAACAAAACTCTGTTTCA+TGG - chr8_4:49937378-49937397 None:intergenic 35.0%
! TTCAAGTAAATGGACCCTTT+TGG - chr8_4:49937398-49937417 None:intergenic 35.0%
AGCATGTGGATTCAAGTAAA+TGG - chr8_4:49937408-49937427 None:intergenic 35.0%
AATTATGTTTCCCCTAAAGC+AGG + chr8_4:49937582-49937601 Msa1330690:intron 35.0%
ATTCAAGGTATGGGTATACA+AGG + chr8_4:49937628-49937647 Msa1330690:CDS 35.0%
AAGTAACAAGAGTCCATTCA+AGG + chr8_4:49937733-49937752 Msa1330690:CDS 35.0%
TAATCTGATCTAGACCTTCT+AGG - chr8_4:49937833-49937852 None:intergenic 35.0%
GATCAGATTATGATCCTCAT+CGG + chr8_4:49937843-49937862 Msa1330690:CDS 35.0%
TTGCAAACAAGTATCCTTAC+TGG + chr8_4:49937900-49937919 Msa1330690:CDS 35.0%
! GCTCTTTACTTGATGATTCA+GGG + chr8_4:49938049-49938068 Msa1330690:intron 35.0%
! GGATTAGCATAAGAAACTCT+TGG - chr8_4:49938076-49938095 None:intergenic 35.0%
AACTCTTCAAGTACTTCATC+AGG + chr8_4:49938098-49938117 Msa1330690:CDS 35.0%
ACTCTTCAAGTACTTCATCA+GGG + chr8_4:49938099-49938118 Msa1330690:CDS 35.0%
GCTAAGATTGTTCGGTTATT+AGG - chr8_4:49938235-49938254 None:intergenic 35.0%
!!! ATCTTAGCTTTTTTTGCTGG+TGG + chr8_4:49938247-49938266 Msa1330690:CDS 35.0%
!!! TCTTAGCTTTTTTTGCTGGT+GGG + chr8_4:49938248-49938267 Msa1330690:CDS 35.0%
GAAAAAAGTTGCTCAAGAGT+TGG + chr8_4:49938287-49938306 Msa1330690:CDS 35.0%
TAATTGGAGTCAATTCTCCA+TGG + chr8_4:49938510-49938529 Msa1330690:CDS 35.0%
AGTCAATTCTCCATGGAAAT+TGG + chr8_4:49938517-49938536 Msa1330690:CDS 35.0%
TCTATCAACTCCAATTTCCA+TGG - chr8_4:49938530-49938549 None:intergenic 35.0%
! ATCAAATCAAATGGCTTTGC+TGG - chr8_4:49938655-49938674 None:intergenic 35.0%
GAGAAGTGAAGAGATAAGTG+AGG - chr8_4:49932736-49932755 None:intergenic 40.0%
!! GTGATGTTTTTGTCCCAAGA+GGG + chr8_4:49933117-49933136 Msa1330690:CDS 40.0%
AGTCTGCAATCACAATTACG+CGG - chr8_4:49933345-49933364 None:intergenic 40.0%
TATGAAAATCAGGAGCCACA+TGG + chr8_4:49933515-49933534 Msa1330690:intron 40.0%
GAGCAACCAATAGTACATGA+TGG + chr8_4:49933579-49933598 Msa1330690:CDS 40.0%
TAGCATAAAGAGCCCCTTTA+AGG + chr8_4:49933656-49933675 Msa1330690:CDS 40.0%
! GTCACGGTTGAAATCCTTTT+TGG - chr8_4:49933766-49933785 None:intergenic 40.0%
CCATTCTATGAAGTCTGTCA+CGG - chr8_4:49933782-49933801 None:intergenic 40.0%
TGACAGACTTCATAGAATGG+TGG + chr8_4:49933782-49933801 Msa1330690:CDS 40.0%
CATGACAAGAGAGGAGAAAA+TGG - chr8_4:49933869-49933888 None:intergenic 40.0%
AACAAGCTGATCTAAGCCAT+TGG - chr8_4:49934273-49934292 None:intergenic 40.0%
!! AGCTTGTTGCATTGACAGTA+TGG + chr8_4:49934285-49934304 Msa1330690:intron 40.0%
! GGATTTGCATCTGAGATTTC+TGG - chr8_4:49934652-49934671 None:intergenic 40.0%
TGCAATGCAAACACTTCTGA+AGG + chr8_4:49934703-49934722 Msa1330690:CDS 40.0%
GCAATGCAAACACTTCTGAA+GGG + chr8_4:49934704-49934723 Msa1330690:CDS 40.0%
CAACTGGTAAGTACACTTCA+GGG - chr8_4:49934756-49934775 None:intergenic 40.0%
! GCTAATGTGGTTCTGTTTGA+TGG - chr8_4:49934811-49934830 None:intergenic 40.0%
!!! ACCACATTAGCCTTCTTTTC+TGG + chr8_4:49934820-49934839 Msa1330690:CDS 40.0%
ACCAGAAAAGAAGGCTAATG+TGG - chr8_4:49934824-49934843 None:intergenic 40.0%
!!! ACATTAGCCTTCTTTTCTGG+TGG + chr8_4:49934823-49934842 Msa1330690:CDS 40.0%
!!! CATTAGCCTTCTTTTCTGGT+GGG + chr8_4:49934824-49934843 Msa1330690:CDS 40.0%
!!! ATTAGCCTTCTTTTCTGGTG+GGG + chr8_4:49934825-49934844 Msa1330690:CDS 40.0%
CAACACATCATTGAAAGGCA+AGG - chr8_4:49935067-49935086 None:intergenic 40.0%
! ATTTTCAGTGGAGATTCCAG+TGG + chr8_4:49935098-49935117 Msa1330690:CDS 40.0%
ATCACATCAAAAGGCTTAGC+AGG - chr8_4:49935231-49935250 None:intergenic 40.0%
CTATATCCAAACTTGCCTCA+AGG - chr8_4:49935346-49935365 None:intergenic 40.0%
TGCTTCCATTCAAGTGTTAC+GGG - chr8_4:49935462-49935481 None:intergenic 40.0%
CTGCTTCCATTCAAGTGTTA+CGG - chr8_4:49935463-49935482 None:intergenic 40.0%
GTAACACTTGAATGGAAGCA+GGG + chr8_4:49935462-49935481 Msa1330690:intron 40.0%
TAACACTTGAATGGAAGCAG+GGG + chr8_4:49935463-49935482 Msa1330690:intron 40.0%
ATCTCGACTCACAATATCAG+TGG + chr8_4:49935489-49935508 Msa1330690:intron 40.0%
TCTCGACTCACAATATCAGT+GGG + chr8_4:49935490-49935509 Msa1330690:intron 40.0%
ACGCTTAACGTTCGTATACA+CGG - chr8_4:49935587-49935606 None:intergenic 40.0%
AATAGGAGTCTTCCATTCAG+GGG - chr8_4:49936064-49936083 None:intergenic 40.0%
GAATAGGAGTCTTCCATTCA+GGG - chr8_4:49936065-49936084 None:intergenic 40.0%
AGAATAGGAGTCTTCCATTC+AGG - chr8_4:49936066-49936085 None:intergenic 40.0%
TCCTAATGTAACCATGGCTA+TGG + chr8_4:49936238-49936257 Msa1330690:intron 40.0%
! TCACCTGTTAGTTTAGTGAG+TGG + chr8_4:49936274-49936293 Msa1330690:intron 40.0%
ACGTGAGCATCTATGTAAGT+GGG + chr8_4:49936460-49936479 Msa1330690:intron 40.0%
! AAAGTGCTAAAGAAGGTGAG+TGG - chr8_4:49937048-49937067 None:intergenic 40.0%
AGTTTGGAGAGGATTGAAGA+AGG + chr8_4:49937293-49937312 Msa1330690:CDS 40.0%
CATGGTGGTTGTATACTTCT+TGG - chr8_4:49937360-49937379 None:intergenic 40.0%
! CTTAACTGGTGAAAAGCATG+TGG - chr8_4:49937422-49937441 None:intergenic 40.0%
AGCTGCTTGATATGTGTCAT+TGG + chr8_4:49937517-49937536 Msa1330690:intron 40.0%
! GCTGCTTGATATGTGTCATT+GGG + chr8_4:49937518-49937537 Msa1330690:intron 40.0%
! CTGCTTGATATGTGTCATTG+GGG + chr8_4:49937519-49937538 Msa1330690:intron 40.0%
TGGTGAAGAGATTCAAGGTA+TGG + chr8_4:49937618-49937637 Msa1330690:CDS 40.0%
GGTGAAGAGATTCAAGGTAT+GGG + chr8_4:49937619-49937638 Msa1330690:CDS 40.0%
AAGGTATGGGTATACAAGGA+AGG + chr8_4:49937632-49937651 Msa1330690:CDS 40.0%
AAGAAAACATGGGCCAATTC+AGG - chr8_4:49937767-49937786 None:intergenic 40.0%
TCTTCCTTTCAGTGTGTCTA+AGG + chr8_4:49937787-49937806 Msa1330690:CDS 40.0%
ATGACCTTAGACACACTGAA+AGG - chr8_4:49937794-49937813 None:intergenic 40.0%
GCTATGTTTACAAGCCTAGA+AGG + chr8_4:49937816-49937835 Msa1330690:CDS 40.0%
ACTAAAAGCTGTAACCGATG+AGG - chr8_4:49937860-49937879 None:intergenic 40.0%
!! TCGGTTACAGCTTTTAGTTG+AGG + chr8_4:49937862-49937881 Msa1330690:CDS 40.0%
CATGGCATGAAAGCAGAAAA+TGG - chr8_4:49937946-49937965 None:intergenic 40.0%
TTCTGCTTTCATGCCATGAT+TGG + chr8_4:49937948-49937967 Msa1330690:CDS 40.0%
TCTGCTTTCATGCCATGATT+GGG + chr8_4:49937949-49937968 Msa1330690:CDS 40.0%
ATTGTGAACCTACCCAATCA+TGG - chr8_4:49937964-49937983 None:intergenic 40.0%
! CGCTCTTTACTTGATGATTC+AGG + chr8_4:49938048-49938067 Msa1330690:intron 40.0%
!! CAAAAATCCTTCTGAGGTGT+TGG - chr8_4:49938137-49938156 None:intergenic 40.0%
GTTAGGCAAAAATCCTTCTG+AGG - chr8_4:49938143-49938162 None:intergenic 40.0%
CAACAGGCAAATTCAACTGA+GGG - chr8_4:49938180-49938199 None:intergenic 40.0%
AATTTGCCTGTTGGAAAGCT+TGG + chr8_4:49938187-49938206 Msa1330690:CDS 40.0%
TTGTTCGGTTATTAGGGTGT+TGG - chr8_4:49938228-49938247 None:intergenic 40.0%
!!! CTTAGCTTTTTTTGCTGGTG+GGG + chr8_4:49938249-49938268 Msa1330690:CDS 40.0%
AAAGTTGCTCAAGAGTTGGA+AGG + chr8_4:49938291-49938310 Msa1330690:CDS 40.0%
GTTCATGAGTACCTTCCAAA+AGG + chr8_4:49938334-49938353 Msa1330690:CDS 40.0%
!!! AAGTTTTGTTTGTGCCCTAG+TGG + chr8_4:49938388-49938407 Msa1330690:CDS 40.0%
TAAATTGCTTCCACCACTCT+TGG - chr8_4:49938430-49938449 None:intergenic 40.0%
!! CGTGATGTTTTTGTCCCAAG+AGG + chr8_4:49933116-49933135 Msa1330690:CDS 45.0%
TTCTGTAGATGGACCCTCTT+GGG - chr8_4:49933133-49933152 None:intergenic 45.0%
TTTCTGTAGATGGACCCTCT+TGG - chr8_4:49933134-49933153 None:intergenic 45.0%
TGATGCTGTAACTACCATCG+CGG + chr8_4:49933375-49933394 Msa1330690:intron 45.0%
AAAAAGTTGTCTGACCGCGA+TGG - chr8_4:49933392-49933411 None:intergenic 45.0%
ATCTCTTCACCATCTCCATG+TGG - chr8_4:49933533-49933552 None:intergenic 45.0%
!! TAGGGTGCTTAGCCTTAAAG+GGG - chr8_4:49933671-49933690 None:intergenic 45.0%
!! CTAGGGTGCTTAGCCTTAAA+GGG - chr8_4:49933672-49933691 None:intergenic 45.0%
!! ACTAGGGTGCTTAGCCTTAA+AGG - chr8_4:49933673-49933692 None:intergenic 45.0%
CCGTGACAGACTTCATAGAA+TGG + chr8_4:49933779-49933798 Msa1330690:CDS 45.0%
CAGACTTCATAGAATGGTGG+AGG + chr8_4:49933785-49933804 Msa1330690:CDS 45.0%
TTCTCCTCTCTTGTCATGAC+TGG + chr8_4:49933871-49933890 Msa1330690:CDS 45.0%
TCTCCTCTCTTGTCATGACT+GGG + chr8_4:49933872-49933891 Msa1330690:CDS 45.0%
TTACCCAGTCATGACAAGAG+AGG - chr8_4:49933878-49933897 None:intergenic 45.0%
CTAGCAACTTCAACATGCTG+AGG + chr8_4:49933922-49933941 Msa1330690:intron 45.0%
TGAAGGGTTCCAGCCTAAAA+GGG + chr8_4:49934720-49934739 Msa1330690:CDS 45.0%
! TAGACACATCCCTTTTAGGC+TGG - chr8_4:49934732-49934751 None:intergenic 45.0%
! GGGATAGACACATCCCTTTT+AGG - chr8_4:49934736-49934755 None:intergenic 45.0%
CCAACTGGTAAGTACACTTC+AGG - chr8_4:49934757-49934776 None:intergenic 45.0%
CCTGAAGTGTACTTACCAGT+TGG + chr8_4:49934754-49934773 Msa1330690:CDS 45.0%
AAAGTTAGGCCCACCAAATC+TGG + chr8_4:49934777-49934796 Msa1330690:CDS 45.0%
AAGTTAGGCCCACCAAATCT+GGG + chr8_4:49934778-49934797 Msa1330690:CDS 45.0%
!! TGGTTCTGTTTGATGGGCTT+TGG - chr8_4:49934804-49934823 None:intergenic 45.0%
GTGTCCAAGTGGATATGAAG+TGG + chr8_4:49934975-49934994 Msa1330690:CDS 45.0%
CTAGCCACTTCATATCCACT+TGG - chr8_4:49934982-49935001 None:intergenic 45.0%
! AGTGGCTAGTCCAAGAATTG+TGG + chr8_4:49934993-49935012 Msa1330690:CDS 45.0%
!! ATGCATGAAAGTGTCCCTTG+AGG + chr8_4:49935328-49935347 Msa1330690:intron 45.0%
CTTGACCCGTAACACTTGAA+TGG + chr8_4:49935454-49935473 Msa1330690:intron 45.0%
CGTAACACTTGAATGGAAGC+AGG + chr8_4:49935461-49935480 Msa1330690:intron 45.0%
CTCGACTCACAATATCAGTG+GGG + chr8_4:49935491-49935510 Msa1330690:intron 45.0%
CGCTTAACGTTCGTATACAC+GGG - chr8_4:49935586-49935605 None:intergenic 45.0%
! TTCAGGGGCGGATTTGAATA+GGG - chr8_4:49936049-49936068 None:intergenic 45.0%
! ATTCAGGGGCGGATTTGAAT+AGG - chr8_4:49936050-49936069 None:intergenic 45.0%
TATTCAAATCCGCCCCTGAA+TGG + chr8_4:49936049-49936068 Msa1330690:intron 45.0%
GCCATAGCCATGGTTACATT+AGG - chr8_4:49936242-49936261 None:intergenic 45.0%
CATTAATCAGGCCATAGCCA+TGG - chr8_4:49936252-49936271 None:intergenic 45.0%
CTGCCACTCACTAAACTAAC+AGG - chr8_4:49936280-49936299 None:intergenic 45.0%
CACGTGAGCATCTATGTAAG+TGG + chr8_4:49936459-49936478 Msa1330690:intron 45.0%
!! ATAAATGGTGCCGTCAGCTA+CGG - chr8_4:49936486-49936505 None:intergenic 45.0%
TATACATGGAGGTGATGCTG+AGG + chr8_4:49936871-49936890 Msa1330690:intron 45.0%
! ATGCTGAGGCATCTTGTCTT+GGG + chr8_4:49936885-49936904 Msa1330690:intron 45.0%
TAAGTGTGATCTCCCCACAA+GGG + chr8_4:49937089-49937108 Msa1330690:intron 45.0%
GTGATGTGATTTCCCTTGTG+GGG - chr8_4:49937104-49937123 None:intergenic 45.0%
CGTGATGTGATTTCCCTTGT+GGG - chr8_4:49937105-49937124 None:intergenic 45.0%
TCGTGATGTGATTTCCCTTG+TGG - chr8_4:49937106-49937125 None:intergenic 45.0%
GTAGCTGCCATTGTTTGAAG+AGG - chr8_4:49937140-49937159 None:intergenic 45.0%
ATCTCTTCACCATCTCCATG+TGG - chr8_4:49933533-49933552 None:intergenic 45.0%
GGAGATGGTGAAGAGATTCA+AGG + chr8_4:49937613-49937632 Msa1330690:CDS 45.0%
GAGCAACCATTGGTACATGA+TGG + chr8_4:49937656-49937675 Msa1330690:CDS 45.0%
TCAGGATGAGTTGCCTTGAA+TGG - chr8_4:49937749-49937768 None:intergenic 45.0%
CAAGGCAACTCATCCTGAAT+TGG + chr8_4:49937751-49937770 Msa1330690:CDS 45.0%
CCTTGACTTCTGTTCCAGTA+AGG - chr8_4:49937917-49937936 None:intergenic 45.0%
CCTTACTGGAACAGAAGTCA+AGG + chr8_4:49937914-49937933 Msa1330690:CDS 45.0%
CTTTCATGCCATGATTGGGT+AGG + chr8_4:49937953-49937972 Msa1330690:intron 45.0%
AGGCAAATTCAACTGAGGGA+TGG - chr8_4:49938176-49938195 None:intergenic 45.0%
CCAACAGGCAAATTCAACTG+AGG - chr8_4:49938181-49938200 None:intergenic 45.0%
CCTCAGTTGAATTTGCCTGT+TGG + chr8_4:49938178-49938197 Msa1330690:CDS 45.0%
AAAGCTTGGCCCACCTAATA+CGG + chr8_4:49938201-49938220 Msa1330690:CDS 45.0%
!! TTAGGGTGTTGGTCCGTATT+AGG - chr8_4:49938217-49938236 None:intergenic 45.0%
! TTGCCACTTCATGTCCACTA+GGG - chr8_4:49938405-49938424 None:intergenic 45.0%
! GTGGTGGAAGCAATTTATGC+AGG + chr8_4:49938433-49938452 Msa1330690:CDS 45.0%
!! AATATTATTTAATTATTTGA+CGG - chr8_4:49935527-49935546 None:intergenic 5.0%
!! TGTATATATTAAAAAATAAT+AGG + chr8_4:49935883-49935902 Msa1330690:intron 5.0%
!! AAAAAGTAATAAAAAAAATT+TGG + chr8_4:49936002-49936021 Msa1330690:intron 5.0%
AATCAGGAGCCACATGGAGA+TGG + chr8_4:49933521-49933540 Msa1330690:intron 50.0%
TAAGGCTAAGCACCCTAGTG+AGG + chr8_4:49933674-49933693 Msa1330690:CDS 50.0%
CTGAAGGGTTCCAGCCTAAA+AGG + chr8_4:49934719-49934738 Msa1330690:CDS 50.0%
AGTGTCCCTTGAGGCAAGTT+TGG + chr8_4:49935337-49935356 Msa1330690:intron 50.0%
GCTCGTAAGAGCTTGTCTAC+TGG + chr8_4:49935365-49935384 Msa1330690:intron 50.0%
! GATGCTGAGGCATCTTGTCT+TGG + chr8_4:49936884-49936903 Msa1330690:intron 50.0%
! TGCTGAGGCATCTTGTCTTG+GGG + chr8_4:49936886-49936905 Msa1330690:intron 50.0%
GTAAGTGTGATCTCCCCACA+AGG + chr8_4:49937088-49937107 Msa1330690:intron 50.0%
TCCATGTGGCTCCTGCTTTA+GGG - chr8_4:49937596-49937615 None:intergenic 50.0%
CAAGGAAGGAGAGCAACCAT+TGG + chr8_4:49937646-49937665 Msa1330690:CDS 50.0%
TGCAATGCCAACACCTCAGA+AGG + chr8_4:49938127-49938146 Msa1330690:CDS 50.0%
GGGATGGACACATCTCTGTT+AGG - chr8_4:49938160-49938179 None:intergenic 50.0%
!! GGTGTTGGTCCGTATTAGGT+GGG - chr8_4:49938213-49938232 None:intergenic 50.0%
!!! TTTTTTGCTGGTGGGGCACA+TGG + chr8_4:49938256-49938275 Msa1330690:CDS 50.0%
GCTCAAGAGTTGGAAGGACA+AGG + chr8_4:49938297-49938316 Msa1330690:CDS 50.0%
! CTTGCCACTTCATGTCCACT+AGG - chr8_4:49938406-49938425 None:intergenic 50.0%
TGAAGTGGCAAGTCCAAGAG+TGG + chr8_4:49938414-49938433 Msa1330690:CDS 50.0%
GGTGGGCCTAACTTTCCAAC+TGG - chr8_4:49934772-49934791 None:intergenic 55.0%
! GGCTTTGGCCCAGATTTGGT+GGG - chr8_4:49934789-49934808 None:intergenic 55.0%
! GATGGGCTTTGGCCCAGATT+TGG - chr8_4:49934793-49934812 None:intergenic 55.0%
ATGGGCCCCACCAGAAAAGA+AGG - chr8_4:49934833-49934852 None:intergenic 55.0%
!! TTCTTTTCTGGTGGGGCCCA+TGG + chr8_4:49934832-49934851 Msa1330690:CDS 55.0%
CACTTGAATGGAAGCAGGGG+CGG + chr8_4:49935466-49935485 Msa1330690:intron 55.0%
! GGGCGGATTTGAATAGGGCA+TGG - chr8_4:49936044-49936063 None:intergenic 55.0%
AGGAGTCTTCCATTCAGGGG+CGG - chr8_4:49936061-49936080 None:intergenic 55.0%
TGTAAGTGGGCCGTAGCTGA+CGG + chr8_4:49936473-49936492 Msa1330690:intron 55.0%
CCATGTGGCTCCTGCTTTAG+GGG - chr8_4:49937595-49937614 None:intergenic 55.0%
CTCCATGTGGCTCCTGCTTT+AGG - chr8_4:49937597-49937616 None:intergenic 55.0%
AAGCAGGAGCCACATGGAGA+TGG + chr8_4:49937598-49937617 Msa1330690:intron 55.0%
!! GGGTGTTGGTCCGTATTAGG+TGG - chr8_4:49938214-49938233 None:intergenic 55.0%
! GTGCCCTAGTGGACATGAAG+TGG + chr8_4:49938399-49938418 Msa1330690:CDS 55.0%
AGTGGCAAGTCCAAGAGTGG+TGG + chr8_4:49938417-49938436 Msa1330690:CDS 55.0%
! GGGCTTTGGCCCAGATTTGG+TGG - chr8_4:49934790-49934809 None:intergenic 60.0%
CCCCTAAAGCAGGAGCCACA+TGG + chr8_4:49937592-49937611 Msa1330690:intron 60.0%
GGTGGGCCAAGCTTTCCAAC+AGG - chr8_4:49938196-49938215 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 49932680 49938738 49932680 ID=Msa1330690;Name=Msa1330690
chr8_4 mRNA 49932680 49938738 49932680 ID=Msa1330690-mRNA-1;Parent=Msa1330690;Name=Msa1330690-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.16|0.14|1|1|1|7|0|819
chr8_4 exon 49932680 49932910 49932680 ID=Msa1330690-mRNA-1:exon:14525;Parent=Msa1330690-mRNA-1
chr8_4 exon 49933011 49933138 49933011 ID=Msa1330690-mRNA-1:exon:14526;Parent=Msa1330690-mRNA-1
chr8_4 exon 49933527 49933893 49933527 ID=Msa1330690-mRNA-1:exon:14527;Parent=Msa1330690-mRNA-1
chr8_4 exon 49934646 49935245 49934646 ID=Msa1330690-mRNA-1:exon:14528;Parent=Msa1330690-mRNA-1
chr8_4 exon 49937266 49937363 49937266 ID=Msa1330690-mRNA-1:exon:14529;Parent=Msa1330690-mRNA-1
chr8_4 exon 49937604 49937970 49937604 ID=Msa1330690-mRNA-1:exon:14530;Parent=Msa1330690-mRNA-1
chr8_4 exon 49938070 49938738 49938070 ID=Msa1330690-mRNA-1:exon:14531;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49932680 49932910 49932680 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49933011 49933138 49933011 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49933527 49933893 49933527 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49934646 49935245 49934646 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49937266 49937363 49937266 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49937604 49937970 49937604 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
chr8_4 CDS 49938070 49938738 49938070 ID=Msa1330690-mRNA-1:cds;Parent=Msa1330690-mRNA-1
Gene Sequence

>Msa1330690

ATGGAGGCTTTACGATGTTTCACAGCATCACTGTTACTATCACTCTTCTTCTTCCTCACTTATCTCTTCACTTCTCAAAAAGGATATCATTTTTCCTTCTTTGTTTTTCCTTTCTCTCTTCCTAGCATAAAAGACATGAATAACACAACACAAGTAATTAAACCTCATCAGTTTCTGACTTATAACTCTGCATATAGAAGCTTTGACCATAAAGCAAACAGTAGCATTAAGAAAATTATGACTAGCTTGGATAGAGTTGAAGAAAGTTTGGCAGAAGCTCGAGCCTCAATTCGAGAAGCAATTCTTTCAAGGAATTACAGTACTACTTCAAGGAGGCGTGATGTTTTTGTCCCAAGAGGGAGCCACATGGAGATGGTGAAGAGATTGAAGATATGGGTATACAAAGAAGGAGAGCAACCAATAGTACATGATGGACCATTGAACAACATATATGCAATTGAAGGTCAATTCATTGATGAAATAGACAATAGCATAAAGAGCCCCTTTAAGGCTAAGCACCCTAGTGAGGCACACATATTTTTCCTTCCTTTTAGTGTTGCAAATGTGGTTCAATATGTTTATAAGCCAATTATGTCCAAAAAGGATTTCAACCGTGACAGACTTCATAGAATGGTGGAGGATTATGTAAATGTTGTTGCTGATAAGTATCCTTATTGGAATAGAAGTAATGGTGCTGACCATTTTCTCCTCTCTTGTCATGACTGGGCACCAGAAATCTCAGATGCAAATCCAAACCTCTTCAAAAACTTCACAAGAGTCTTATGCAATGCAAACACTTCTGAAGGGTTCCAGCCTAAAAGGGATGTGTCTATCCCTGAAGTGTACTTACCAGTTGGAAAGTTAGGCCCACCAAATCTGGGCCAAAGCCCATCAAACAGAACCACATTAGCCTTCTTTTCTGGTGGGGCCCATGGTGACCTTAGAAAATTGTTACTAAATCATTGGAAGGACAAAGATGCACAAGTTCAAGTTCATGAGTATCTTCCAAAGGGTCAAAACTATACACAATTAATGGGACTAAGTAAATTTTGTTTGTGTCCAAGTGGATATGAAGTGGCTAGTCCAAGAATTGTGGAAGCAATTAATGCTGGGTGTGTGCCTGTGATTATTTCTCAGAATTATTCCTTGCCTTTCAATGATGTGTTGAATTGGAGTGAATTTTCAGTGGAGATTCCAGTGGAGAAAATAGTAGAGATTAAGACTATATTACAAAATATTTCAAAAGATAAGTACATGAAGTTGCATATGAATGTGATGAAAGTTCAAAAGCATTTTGTTATGAATAGGCCTGCTAAGCCTTTTGATTTTGGTCATAGGAGAAAGAATATGACTAGTTTGGAGAGGATTGAAGAAGGTTTATCACAAACACGAGCATTGATTCAGAAAGCAATTCGGTCCAAGAAGAGCCACATGGAGATGGTGAAGAGATTCAAGGTATGGGTATACAAGGAAGGAGAGCAACCATTGGTACATGATGGACCTGTAAACAACAAATATTCCATAGAAGGTCAATTCATTGATGAAATAGACACAAGTAACAAGAGTCCATTCAAGGCAACTCATCCTGAATTGGCCCATGTTTTCTTTCTTCCTTTCAGTGTGTCTAAGGTCATTCGCTATGTTTACAAGCCTAGAAGGTCTAGATCAGATTATGATCCTCATCGGTTACAGCTTTTAGTTGAGGACTATATTAGCATTGTTGCAAACAAGTATCCTTACTGGAACAGAAGTCAAGGTGCTGACCATTTTCTGCTTTCATGCCATGATTGGGGACCAAGAGTTTCTTATGCTAATCCTAAACTCTTCAAGTACTTCATCAGGGCACTCTGCAATGCCAACACCTCAGAAGGATTTTTGCCTAACAGAGATGTGTCCATCCCTCAGTTGAATTTGCCTGTTGGAAAGCTTGGCCCACCTAATACGGACCAACACCCTAATAACCGAACAATCTTAGCTTTTTTTGCTGGTGGGGCACATGGTAAGATTAGAAAAAAGTTGCTCAAGAGTTGGAAGGACAAGGATGAAGAAGTTCAAGTTCATGAGTACCTTCCAAAAGGTCAAGATTATACAAAGTTGATGGGTCTAAGTAAGTTTTGTTTGTGCCCTAGTGGACATGAAGTGGCAAGTCCAAGAGTGGTGGAAGCAATTTATGCAGGTTGTGTGCCAGTGATAATTTGTGACAATTACTCTTTGCCTTTTAGTGATGTGCTTAATTGGAGTCAATTCTCCATGGAAATTGGAGTTGATAGAATACCAGAAATTAAGACTATTTTACAAAATATTACAGAAACAAAGTATAGGGTGTTGTATTCAAATGTTAGACGTGTACGAAAGCATTTTCAGATGAATAGGCCAGCAAAGCCATTTGATTTGATACATATGATACTTCACTCTGTTTGGCTTAGACGTTTAAATTTTAGGTTAATAATGTCTGATTAA
Protein sequence

>Msa1330690

MEALRCFTASLLLSLFFFLTYLFTSQKGYHFSFFVFPFSLPSIKDMNNTTQVIKPHQFLTYNSAYRSFDHKANSSIKKIMTSLDRVEESLAEARASIREAILSRNYSTTSRRRDVFVPRGSHMEMVKRLKIWVYKEGEQPIVHDGPLNNIYAIEGQFIDEIDNSIKSPFKAKHPSEAHIFFLPFSVANVVQYVYKPIMSKKDFNRDRLHRMVEDYVNVVADKYPYWNRSNGADHFLLSCHDWAPEISDANPNLFKNFTRVLCNANTSEGFQPKRDVSIPEVYLPVGKLGPPNLGQSPSNRTTLAFFSGGAHGDLRKLLLNHWKDKDAQVQVHEYLPKGQNYTQLMGLSKFCLCPSGYEVASPRIVEAINAGCVPVIISQNYSLPFNDVLNWSEFSVEIPVEKIVEIKTILQNISKDKYMKLHMNVMKVQKHFVMNRPAKPFDFGHRRKNMTSLERIEEGLSQTRALIQKAIRSKKSHMEMVKRFKVWVYKEGEQPLVHDGPVNNKYSIEGQFIDEIDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRRSRSDYDPHRLQLLVEDYISIVANKYPYWNRSQGADHFLLSCHDWGPRVSYANPKLFKYFIRALCNANTSEGFLPNRDVSIPQLNLPVGKLGPPNTDQHPNNRTILAFFAGGAHGKIRKKLLKSWKDKDEEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIGVDRIPEIKTILQNITETKYRVLYSNVRRVRKHFQMNRPAKPFDLIHMILHSVWLRRLNFRLIMSD*