Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216710 | XP_039689443.1 | 95.455 | 858 | 24 | 3 | 1 | 844 | 28 | 884 | 0.0 | 1682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216710 | sp|Q42910|PPDK_MESCR | 81.893 | 856 | 140 | 3 | 1 | 842 | 94 | 948 | 0.0 | 1473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1216710 | Msa1262730 | 0.827928 | 1.192801e-54 | -8.615850e-47 |
| Msa1216710 | Msa1329610 | 0.825556 | 4.396048e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216710 | MtrunA17_Chr4g0066381 | 91.103 | 843 | 65 | 3 | 1 | 834 | 92 | 933 | 0.0 | 1595 |
| Msa1216710 | MtrunA17_Chr4g0066391 | 95.636 | 550 | 17 | 2 | 1 | 544 | 28 | 576 | 0.0 | 1088 |
| Msa1216710 | MtrunA17_Chr4g0066401 | 94.915 | 295 | 7 | 1 | 558 | 844 | 1 | 295 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216710 | AT4G15530.1 | 79.254 | 858 | 162 | 4 | 1 | 844 | 100 | 955 | 0.0 | 1433 |
| Msa1216710 | AT4G15530.4 | 79.254 | 858 | 162 | 4 | 1 | 844 | 100 | 955 | 0.0 | 1433 |
| Msa1216710 | AT4G15530.7 | 79.254 | 858 | 162 | 4 | 1 | 844 | 1 | 856 | 0.0 | 1432 |
| Msa1216710 | AT4G15530.6 | 79.254 | 858 | 162 | 4 | 1 | 844 | 107 | 962 | 0.0 | 1432 |
| Msa1216710 | AT4G15530.3 | 79.254 | 858 | 162 | 4 | 1 | 844 | 1 | 856 | 0.0 | 1432 |
| Msa1216710 | AT4G15530.5 | 79.254 | 858 | 162 | 4 | 1 | 844 | 107 | 962 | 0.0 | 1432 |
| Msa1216710 | AT4G15530.2 | 79.254 | 858 | 162 | 4 | 1 | 844 | 19 | 874 | 0.0 | 1431 |
Find 208 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATGGTGTTTGGTAATA+TGG | 0.097141 | 8_1:+78637239 | Msa1216710:CDS |
| GCAAAATAATTGTGGTTTAT+TGG | 0.168159 | 8_1:+78641532 | Msa1216710:three_prime_UTR |
| GCTAATTCTAGTTGCTTCTT+TGG | 0.182850 | 8_1:-78637117 | None:intergenic |
| TTAGTTGACCCACACCTTTC+TGG | 0.196958 | 8_1:-78641085 | None:intergenic |
| ACAAGGAAAGAGTGCAATTT+TGG | 0.237894 | 8_1:+78638329 | Msa1216710:CDS |
| TGTTAAGTTACCTTCAAATT+TGG | 0.245919 | 8_1:-78641143 | None:intergenic |
| TGATAGGTGGTGGTTGTAAT+TGG | 0.248511 | 8_1:+78639091 | Msa1216710:intron |
| ATGTCTCGTGTTCTCCATTT+AGG | 0.264862 | 8_1:+78641333 | Msa1216710:CDS |
| CGAAACATTAATCAGATAAC+TGG | 0.274659 | 8_1:+78637189 | Msa1216710:CDS |
| ACTTTGTTCTTGTACTTAGA+TGG | 0.277004 | 8_1:-78638222 | None:intergenic |
| ACTGGTGAAAAGAAACTTTA+TGG | 0.279457 | 8_1:+78637306 | Msa1216710:CDS |
| GACATCAAGTGAGTTTAATA+AGG | 0.284688 | 8_1:+78640423 | Msa1216710:CDS |
| CTAGCTGTTATTGCATCTTC+AGG | 0.294021 | 8_1:-78639381 | None:intergenic |
| TAATCAGATAACTGGGCTAA+TGG | 0.301146 | 8_1:+78637197 | Msa1216710:CDS |
| TCCGGCATTAAGCGAGGATT+TGG | 0.306858 | 8_1:+78639198 | Msa1216710:CDS |
| AGACTCGTTTACTTCAATAT+TGG | 0.307162 | 8_1:-78638981 | None:intergenic |
| TACTGTAGCCAAATGTCATT+TGG | 0.311417 | 8_1:-78640726 | None:intergenic |
| GCCTGCATCTCAGTCAATTC+TGG | 0.316425 | 8_1:-78640108 | None:intergenic |
| TTGCATGCCAGATGCTTATA+AGG | 0.318819 | 8_1:+78637528 | Msa1216710:CDS |
| CTTCCTTCATACCTTTCTGC+TGG | 0.323308 | 8_1:+78640769 | Msa1216710:CDS |
| ATGGACACAGTTCTTAATCT+TGG | 0.333394 | 8_1:+78636568 | Msa1216710:CDS |
| TGCTGTGAATATTCAATCTA+TGG | 0.335352 | 8_1:+78637224 | Msa1216710:CDS |
| GGTAATATGGGAAATACTTC+AGG | 0.336156 | 8_1:+78637252 | Msa1216710:CDS |
| TCTAACAATCGGATTGTTAC+TGG | 0.337483 | 8_1:-78639762 | None:intergenic |
| GGGAGCAAACTTGGCAGAAA+TGG | 0.342906 | 8_1:+78635369 | Msa1216710:CDS |
| CACAAGGAATTGGACTTTGC+AGG | 0.346976 | 8_1:+78639415 | Msa1216710:CDS |
| CTCATGGTCTCTAGAACTTC+AGG | 0.349864 | 8_1:-78637502 | None:intergenic |
| TGTCTTGGGCTGATCAAATA+AGG | 0.349941 | 8_1:+78639230 | Msa1216710:CDS |
| GATAGGTGGTGGTTGTAATT+GGG | 0.352089 | 8_1:+78639092 | Msa1216710:intron |
| ACTGGTTTGCCTGCATCCCC+TGG | 0.352559 | 8_1:+78638252 | Msa1216710:CDS |
| GGGTTCTTCTCTAAGCTATA+AGG | 0.352742 | 8_1:+78640475 | Msa1216710:CDS |
| AGACGTTTCTTAGACATGTT+TGG | 0.353523 | 8_1:+78636658 | Msa1216710:CDS |
| TGGGGAAAGTGTTGTGTGTC+TGG | 0.364893 | 8_1:+78638953 | Msa1216710:CDS |
| ATTTGGAAACTTTCATGTCT+TGG | 0.365782 | 8_1:+78639215 | Msa1216710:CDS |
| AGAAATGGTGCACAAGGAAT+TGG | 0.365998 | 8_1:+78639405 | Msa1216710:CDS |
| TTTGGAAACTTTCATGTCTT+GGG | 0.370890 | 8_1:+78639216 | Msa1216710:CDS |
| AGACAAGTCCAGAGGACATT+GGG | 0.372968 | 8_1:+78638855 | Msa1216710:CDS |
| GCATCCCCTGGAGCTGCGGT+TGG | 0.374079 | 8_1:+78638264 | Msa1216710:CDS |
| TCAAAATCTGATTGTTGATA+AGG | 0.379114 | 8_1:-78639711 | None:intergenic |
| TGTAGTTCTACCAGAGATAA+TGG | 0.383769 | 8_1:+78640176 | Msa1216710:CDS |
| TTATTGGAGAAAACATTGTT+TGG | 0.386507 | 8_1:+78641548 | Msa1216710:three_prime_UTR |
| GACCTTACCCAAATGACATT+TGG | 0.388729 | 8_1:+78640718 | Msa1216710:CDS |
| TAACAGCGGGTGTTCACCTT+TGG | 0.392290 | 8_1:+78635112 | None:intergenic |
| TGTCATTTGGGTAAGGTCAT+TGG | 0.393525 | 8_1:-78640713 | None:intergenic |
| GGTGGTTGTAATTGGGGATA+TGG | 0.394760 | 8_1:+78639099 | Msa1216710:CDS |
| AAGATGTAGTTGCTGGAATC+AGG | 0.402459 | 8_1:+78637476 | Msa1216710:CDS |
| TTGGCAGAAATGGCAACAAT+TGG | 0.404140 | 8_1:+78635379 | Msa1216710:CDS |
| TTTCCTCTGTTCTTGCGTAA+TGG | 0.410992 | 8_1:-78639667 | None:intergenic |
| TTGATATTCTCGACATGCTT+CGG | 0.411636 | 8_1:-78635434 | None:intergenic |
| GCAATAACAGCTAGAAGAAA+TGG | 0.412787 | 8_1:+78639390 | Msa1216710:CDS |
| ACATGTGCCAAGTCACCTTC+AGG | 0.414462 | 8_1:-78639807 | None:intergenic |
| AATCAGATAACTGGGCTAAT+GGG | 0.414551 | 8_1:+78637198 | Msa1216710:CDS |
| ACCTGCCCAACCGCAGCTCC+AGG | 0.415042 | 8_1:-78638270 | None:intergenic |
| ATTGCATTCTTTGCTCAACT+TGG | 0.423442 | 8_1:+78641302 | Msa1216710:CDS |
| CATCCCCTGGAGCTGCGGTT+GGG | 0.424425 | 8_1:+78638265 | Msa1216710:CDS |
| TTCCTTCATACCTTTCTGCT+GGG | 0.426273 | 8_1:+78640770 | Msa1216710:CDS |
| TTTCGATACTTAATAGCCCT+TGG | 0.429413 | 8_1:-78637171 | None:intergenic |
| TTGAATGATGAAGTGGTTGC+TGG | 0.429675 | 8_1:+78636592 | Msa1216710:CDS |
| AATCAAAATGTGCACAGAAA+AGG | 0.430403 | 8_1:+78641106 | Msa1216710:CDS |
| ATCTCCTCCCACAAACCATT+TGG | 0.430655 | 8_1:-78635475 | None:intergenic |
| TCCTTGTGCATGCCATTCCT+CGG | 0.432091 | 8_1:-78638313 | None:intergenic |
| TCCACAGGCGAGGTGATTCT+AGG | 0.432668 | 8_1:+78639157 | Msa1216710:CDS |
| TACTGCTAAACCAAATTTGA+AGG | 0.436038 | 8_1:+78641133 | Msa1216710:CDS |
| TCTATGGTGTTTGGTAATAT+GGG | 0.436697 | 8_1:+78637240 | Msa1216710:CDS |
| TAGGGAGAAGATGTAGTTGC+TGG | 0.436970 | 8_1:+78637469 | Msa1216710:intron |
| GATTTCCATGCCTGGAATGA+TGG | 0.438634 | 8_1:+78636549 | Msa1216710:intron |
| GGGAGGAAAGGGAGCAAACT+TGG | 0.438786 | 8_1:+78635360 | Msa1216710:CDS |
| ATCAAAATGTGCACAGAAAA+GGG | 0.440025 | 8_1:+78641107 | Msa1216710:CDS |
| TCAAGTTCCTTATAAGCATC+TGG | 0.440088 | 8_1:-78637535 | None:intergenic |
| ATGGGAAATACTTCAGGAAC+TGG | 0.442975 | 8_1:+78637258 | Msa1216710:CDS |
| ACCGCAGCTCCAGGGGATGC+AGG | 0.446945 | 8_1:-78638261 | None:intergenic |
| TTATGTGTAGTTGGGAGGAA+AGG | 0.450313 | 8_1:+78635348 | Msa1216710:intron |
| TGCTTCAGATGAAAGGCTAA+AGG | 0.456051 | 8_1:+78639623 | Msa1216710:CDS |
| TGATGAAGTGGTTGCTGGGT+TGG | 0.459454 | 8_1:+78636597 | Msa1216710:CDS |
| GGCTGTGAGAAGGATGATAA+TGG | 0.461097 | 8_1:+78639644 | Msa1216710:CDS |
| TGAGAAAGTGTTCTCTGAGA+TGG | 0.461591 | 8_1:+78640454 | Msa1216710:CDS |
| CTTCATGAATTTCTTCCTGA+AGG | 0.463137 | 8_1:+78639792 | Msa1216710:CDS |
| GAATGTCTATGTTGAAGCTA+AGG | 0.464580 | 8_1:+78636978 | Msa1216710:CDS |
| AATATTCAATCTATGGTGTT+TGG | 0.464716 | 8_1:+78637231 | Msa1216710:CDS |
| ACTGTAGCCAAATGTCATTT+GGG | 0.469166 | 8_1:-78640725 | None:intergenic |
| CTGCTGTTGTAGCTCGTGGA+TGG | 0.470770 | 8_1:+78638933 | Msa1216710:CDS |
| TCTGAGGTTAATCCCATGCT+TGG | 0.472369 | 8_1:+78639897 | Msa1216710:CDS |
| TGCTGTTGTAGCTCGTGGAT+GGG | 0.472949 | 8_1:+78638934 | Msa1216710:CDS |
| ATTTCTTCCTGAAGGTGACT+TGG | 0.473967 | 8_1:+78639800 | Msa1216710:CDS |
| ATCTATCAGATTTCCATGCC+TGG | 0.475192 | 8_1:+78636541 | Msa1216710:intron |
| TTAGACTGCTTCCTGTCTTG+TGG | 0.475560 | 8_1:+78641492 | Msa1216710:three_prime_UTR |
| TGGATGTTGCAATGTCGAAT+TGG | 0.477597 | 8_1:+78637730 | Msa1216710:CDS |
| AGAACTGTGTCCATCATTCC+AGG | 0.483639 | 8_1:-78636559 | None:intergenic |
| TCCAGAATTGACTGAGATGC+AGG | 0.485250 | 8_1:+78640107 | Msa1216710:CDS |
| ATTGGAAAGCGTACTGGTAA+AGG | 0.485922 | 8_1:+78637748 | Msa1216710:CDS |
| TCCAAATCCTCGCTTAATGC+CGG | 0.488847 | 8_1:-78639199 | None:intergenic |
| ATCTGGCATGCAAGTTCTCA+TGG | 0.489479 | 8_1:-78637518 | None:intergenic |
| TATGTGTAGTTGGGAGGAAA+GGG | 0.490148 | 8_1:+78635349 | Msa1216710:intron |
| TTGTGGGAGGAGATACTTGA+AGG | 0.490236 | 8_1:+78635484 | Msa1216710:CDS |
| GCTGCCGCAAGCCTAGCAAT+TGG | 0.491619 | 8_1:-78641443 | None:intergenic |
| TATTCCACACTCATTGTTTG+AGG | 0.493180 | 8_1:+78636864 | Msa1216710:CDS |
| GAAAAGCTAAAGCAATCAAA+AGG | 0.493897 | 8_1:+78636895 | Msa1216710:CDS |
| CTGCTTCCTGTCTTGTGGCA+TGG | 0.497061 | 8_1:+78641497 | Msa1216710:three_prime_UTR |
| ATTGGATTATCTGTGCCTCC+TGG | 0.497182 | 8_1:+78635397 | Msa1216710:CDS |
| TCAACTCTTGGGATAGTCCA+AGG | 0.500415 | 8_1:+78637154 | Msa1216710:CDS |
| ATAAGTGGAACCATTATCTC+TGG | 0.504023 | 8_1:-78640186 | None:intergenic |
| CTGCCCAACCGCAGCTCCAG+GGG | 0.505966 | 8_1:-78638268 | None:intergenic |
| TCAGCAACTAGTGCAGCTCT+TGG | 0.509292 | 8_1:-78640518 | None:intergenic |
| AAAGCAAGCACTTTCTCCTC+CGG | 0.510730 | 8_1:+78639180 | Msa1216710:CDS |
| TGGTAATATCAGAAGGAGAA+TGG | 0.511559 | 8_1:+78639119 | Msa1216710:CDS |
| TGTCGAATTGGAAAGCGTAC+TGG | 0.513357 | 8_1:+78637742 | Msa1216710:CDS |
| TTTGCAGGATTCCAATTGCT+AGG | 0.514085 | 8_1:+78641432 | Msa1216710:intron |
| ATAGGTGGTGGTTGTAATTG+GGG | 0.515187 | 8_1:+78639093 | Msa1216710:intron |
| GCCTGCATCCCCTGGAGCTG+CGG | 0.515502 | 8_1:+78638260 | Msa1216710:CDS |
| AGAGTTTCTCACTAATGCTC+AGG | 0.517854 | 8_1:+78637329 | Msa1216710:CDS |
| TGAATGATGAAGTGGTTGCT+GGG | 0.521032 | 8_1:+78636593 | Msa1216710:CDS |
| CCTGCCCAACCGCAGCTCCA+GGG | 0.522388 | 8_1:-78638269 | None:intergenic |
| AAACAAAGCAATGAAGTCCT+TGG | 0.522922 | 8_1:+78635153 | Msa1216710:exon |
| AGAACCTACCAAATGGTTTG+TGG | 0.525495 | 8_1:+78635467 | Msa1216710:CDS |
| ATCTCGCTGAATGGATCCAC+AGG | 0.525927 | 8_1:+78639142 | Msa1216710:CDS |
| CTACAGCTGCAAAATAATTG+TGG | 0.527223 | 8_1:+78641524 | Msa1216710:three_prime_UTR |
| TGAAGTAAACGAGTCTAGAA+AGG | 0.527639 | 8_1:+78638988 | Msa1216710:CDS |
| CTATGCAACTAACCTCGAAT+GGG | 0.528808 | 8_1:-78640807 | None:intergenic |
| GAACCTACCAAATGGTTTGT+GGG | 0.530784 | 8_1:+78635468 | Msa1216710:CDS |
| GGAGAATGGATCTCGCTGAA+TGG | 0.532856 | 8_1:+78639133 | Msa1216710:CDS |
| AGAGAGCCATGCCACAAGAC+AGG | 0.533063 | 8_1:-78641503 | None:intergenic |
| ATCCCAGCAGAAAGGTATGA+AGG | 0.533887 | 8_1:-78640772 | None:intergenic |
| CTAACAATCGGATTGTTACT+GGG | 0.533941 | 8_1:-78639761 | None:intergenic |
| ACTATGCAACTAACCTCGAA+TGG | 0.533959 | 8_1:-78640808 | None:intergenic |
| GCAGCCGCGAAAACCAAGCA+TGG | 0.537070 | 8_1:-78639910 | None:intergenic |
| CTGCTGAAGATGCCGAGGAA+TGG | 0.542700 | 8_1:+78638301 | Msa1216710:CDS |
| CAACTCTTGGGATAGTCCAA+GGG | 0.543248 | 8_1:+78637155 | Msa1216710:CDS |
| GCTGTTGTAGCTCGTGGATG+GGG | 0.543789 | 8_1:+78638935 | Msa1216710:CDS |
| GAGAAAGTGTTCTCTGAGAT+GGG | 0.545008 | 8_1:+78640455 | Msa1216710:CDS |
| TCTTCTCTAAGCTATAAGGT+TGG | 0.545042 | 8_1:+78640479 | Msa1216710:CDS |
| CGGGTGTTCACCTTTGGCAA+AGG | 0.546332 | 8_1:+78635118 | Msa1216710:five_prime_UTR |
| AGCTACAGACATGGTCAATG+AGG | 0.549342 | 8_1:+78637783 | Msa1216710:CDS |
| AAGAACAAAGTGGTTGCCAC+TGG | 0.552284 | 8_1:+78638234 | Msa1216710:CDS |
| GACTCACTGAAACAGCGGCT+TGG | 0.553809 | 8_1:-78640143 | None:intergenic |
| TTTGGCAAAGGTAGAAGTGA+TGG | 0.554474 | 8_1:+78635130 | Msa1216710:five_prime_UTR |
| TATTCGTTCTGCAATCAAGA+TGG | 0.555466 | 8_1:+78637816 | Msa1216710:CDS |
| TTCACTAGAAATCCAAGCAC+TGG | 0.555536 | 8_1:+78637288 | Msa1216710:CDS |
| AATGTGAAGAACCTACCAAA+TGG | 0.556468 | 8_1:+78635460 | Msa1216710:CDS |
| AATGTCTATGTTGAAGCTAA+GGG | 0.556560 | 8_1:+78636979 | Msa1216710:CDS |
| ATCACTTCTACCTTTGCCAA+AGG | 0.558590 | 8_1:-78635128 | None:intergenic |
| GAAGTGGAGGATCTAACAAT+CGG | 0.559678 | 8_1:-78639773 | None:intergenic |
| AGCTGCACTAGTTGCTGATG+AGG | 0.561217 | 8_1:+78640523 | Msa1216710:CDS |
| TCCTAGAATCACCTCGCCTG+TGG | 0.564037 | 8_1:-78639158 | None:intergenic |
| AGCCAAATGTCATTTGGGTA+AGG | 0.565475 | 8_1:-78640720 | None:intergenic |
| AAGAAGCAGAAATATTCTCT+AGG | 0.566284 | 8_1:+78639862 | Msa1216710:CDS |
| CATGCTGCTGTTGTAGCTCG+TGG | 0.566313 | 8_1:+78638929 | Msa1216710:CDS |
| TCGGTTGATATAGTGAGTCC+AGG | 0.567950 | 8_1:-78635415 | None:intergenic |
| GCTACAGACATGGTCAATGA+GGG | 0.571478 | 8_1:+78637784 | Msa1216710:CDS |
| TAATCAGTTCCTACATCCAC+AGG | 0.573251 | 8_1:+78637855 | Msa1216710:CDS |
| TTTGCAGCATGACCCATTCG+AGG | 0.573401 | 8_1:+78640795 | Msa1216710:CDS |
| CACCAGAGCGAACAGAGACA+AGG | 0.574055 | 8_1:-78635564 | None:intergenic |
| TGTGTCCATCATTCCAGGCA+TGG | 0.575045 | 8_1:-78636554 | None:intergenic |
| TTTCTTTATGTGTAGTTGGG+AGG | 0.575150 | 8_1:+78635343 | Msa1216710:intron |
| AAGGGAGAAAAGTTTCCCTC+AGG | 0.576363 | 8_1:+78636997 | Msa1216710:CDS |
| TCAGGAAGAAATTCATGAAG+TGG | 0.578057 | 8_1:-78639789 | None:intergenic |
| GATTCCAATTGCTAGGCTTG+CGG | 0.579903 | 8_1:+78641439 | Msa1216710:CDS |
| GAGACAAGTCCAGAGGACAT+TGG | 0.583747 | 8_1:+78638854 | Msa1216710:CDS |
| GAATCACTACAAGGATATGA+TGG | 0.584035 | 8_1:+78637579 | Msa1216710:CDS |
| CAGCCGCGAAAACCAAGCAT+GGG | 0.584352 | 8_1:-78639909 | None:intergenic |
| TTCTCCTCCGGCATTAAGCG+AGG | 0.585326 | 8_1:+78639192 | Msa1216710:CDS |
| GCTGCAAAATCCCAGCAGAA+AGG | 0.590533 | 8_1:-78640780 | None:intergenic |
| GGGGATATGGTAATATCAGA+AGG | 0.593273 | 8_1:+78639112 | Msa1216710:CDS |
| GTTGGAATATGCGGAGAGCA+CGG | 0.594197 | 8_1:+78641263 | Msa1216710:CDS |
| ATGTATATACCTGTGGATGT+AGG | 0.597911 | 8_1:-78637864 | None:intergenic |
| CTGTTCAAGAAAATAGATTG+TGG | 0.598558 | 8_1:+78637710 | Msa1216710:CDS |
| GGCTACAGTAGAGATGATGT+TGG | 0.600752 | 8_1:+78640739 | Msa1216710:CDS |
| CCTCCCACAAACCATTTGGT+AGG | 0.601228 | 8_1:-78635471 | None:intergenic |
| TCTTGGATTGAATGATGAAG+TGG | 0.606505 | 8_1:+78636585 | Msa1216710:CDS |
| GCCGAGGAATGGCATGCACA+AGG | 0.608068 | 8_1:+78638312 | Msa1216710:CDS |
| TTGTCCTCAAACAATGAGTG+TGG | 0.609601 | 8_1:-78636868 | None:intergenic |
| AGATGCTTATAAGGAACTTG+AGG | 0.611268 | 8_1:+78637537 | Msa1216710:CDS |
| GGAAGAAATTCATGAAGTGG+AGG | 0.614194 | 8_1:-78639786 | None:intergenic |
| GATTATCAGGTTGGAATATG+CGG | 0.615365 | 8_1:+78641254 | Msa1216710:intron |
| AGTGAACTGACTTCTCAGAC+AGG | 0.615675 | 8_1:+78639834 | Msa1216710:CDS |
| GCAAAGAATGCAATAGAAGA+CGG | 0.618305 | 8_1:-78641293 | None:intergenic |
| CTGGGAGGCCATCCATTGCA+CGG | 0.625961 | 8_1:-78639743 | None:intergenic |
| GACAAGTCCAGAGGACATTG+GGG | 0.626278 | 8_1:+78638856 | Msa1216710:CDS |
| GTTGGCATCTTGACAGCTAG+AGG | 0.632776 | 8_1:+78638893 | Msa1216710:CDS |
| AAAGGCTAAAGGCTGTGAGA+AGG | 0.633234 | 8_1:+78639634 | Msa1216710:CDS |
| GCTGTTTCAGTGAGTCGCAA+TGG | 0.633248 | 8_1:+78640150 | Msa1216710:CDS |
| AATTCTTGAGAATCACTACA+AGG | 0.637925 | 8_1:+78637570 | Msa1216710:CDS |
| TGATCAAATAAGGAAGCTGA+AGG | 0.638289 | 8_1:+78639240 | Msa1216710:CDS |
| ACTTTGCAGGACTGAACACA+TGG | 0.638986 | 8_1:+78639428 | Msa1216710:CDS |
| GCAGCTCAAGTTGCAGTGTG+AGG | 0.641089 | 8_1:+78641461 | Msa1216710:CDS |
| ATTGCGACTCACTGAAACAG+CGG | 0.642670 | 8_1:-78640148 | None:intergenic |
| AGGGGATGCAGGCAAACCAG+TGG | 0.643058 | 8_1:-78638250 | None:intergenic |
| AGGAACTGATTAAGATGTTG+TGG | 0.643869 | 8_1:-78637844 | None:intergenic |
| GCTAGAAGAAATGGTGCACA+AGG | 0.646679 | 8_1:+78639399 | Msa1216710:CDS |
| GGTACTTGACCAGAAAGGTG+TGG | 0.646929 | 8_1:+78641076 | Msa1216710:intron |
| TTACAGGTACTTGACCAGAA+AGG | 0.649625 | 8_1:+78641071 | Msa1216710:intron |
| AAATCCTCGCTTAATGCCGG+AGG | 0.651577 | 8_1:-78639196 | None:intergenic |
| GAAACATTAATCAGATAACT+GGG | 0.658984 | 8_1:+78637190 | Msa1216710:CDS |
| GTACTTGACCAGAAAGGTGT+GGG | 0.660833 | 8_1:+78641077 | Msa1216710:CDS |
| ATCTAAGTACAAGAACAAAG+TGG | 0.663856 | 8_1:+78638224 | Msa1216710:CDS |
| GGCATCTTGACAGCTAGAGG+TGG | 0.670250 | 8_1:+78638896 | Msa1216710:CDS |
| AAAGGCATTAAACATGACAC+AGG | 0.677867 | 8_1:+78636913 | Msa1216710:CDS |
| CTACAGACATGGTCAATGAG+GGG | 0.682158 | 8_1:+78637785 | Msa1216710:CDS |
| TGGCCATTACGCAAGAACAG+AGG | 0.683948 | 8_1:+78639664 | Msa1216710:CDS |
| GAGCGAACAGAGACAAGGAG+AGG | 0.687792 | 8_1:-78635559 | None:intergenic |
| GCTGAATGGATCCACAGGCG+AGG | 0.692849 | 8_1:+78639147 | Msa1216710:CDS |
| AAGGACAGAGACAAGTCCAG+AGG | 0.697658 | 8_1:+78638847 | Msa1216710:CDS |
| CCTACCAAATGGTTTGTGGG+AGG | 0.699192 | 8_1:+78635471 | Msa1216710:CDS |
| AATCAAAATAGCTACAGACA+TGG | 0.710159 | 8_1:+78637774 | Msa1216710:CDS |
| GTTCACTGCTGAAGATGCCG+AGG | 0.719827 | 8_1:+78638296 | Msa1216710:CDS |
| GTTGATATAGTGAGTCCAGG+AGG | 0.743820 | 8_1:-78635412 | None:intergenic |
| ACAATCGGATTGTTACTGGG+AGG | 0.747242 | 8_1:-78639758 | None:intergenic |
| GGAATATGCGGAGAGCACGG+TGG | 0.753583 | 8_1:+78641266 | Msa1216710:CDS |
| ACAAGTCCAGAGGACATTGG+GGG | 0.760716 | 8_1:+78638857 | Msa1216710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACAAAAATCATAAT+AGG | + | chr8_1:78637450-78637469 | Msa1216710:intron | 10.0% |
| !! | AAAAAACAAAAATCATAATA+GGG | + | chr8_1:78637451-78637470 | Msa1216710:intron | 10.0% |
| !! | GTTAATGAAAAATAAATAAA+TGG | - | chr8_1:78638133-78638152 | None:intergenic | 10.0% |
| !! | TAATGTCTTTAAATTAAAAA+AGG | + | chr8_1:78638592-78638611 | Msa1216710:intron | 10.0% |
| !! | ATACTTTATATATTAAGAAA+AGG | - | chr8_1:78640994-78641013 | None:intergenic | 10.0% |
| !! | AATATAGTTTCATATATTAC+TGG | + | chr8_1:78636051-78636070 | Msa1216710:intron | 15.0% |
| !!! | TTTAAATTTGATTCCTTTTA+TGG | + | chr8_1:78636473-78636492 | Msa1216710:intron | 15.0% |
| !!! | TTTTATTGTATGTTATACTT+AGG | + | chr8_1:78636834-78636853 | Msa1216710:intron | 15.0% |
| !! | TATTTACAAAAGAAAGTTAA+AGG | - | chr8_1:78637922-78637941 | None:intergenic | 15.0% |
| !! | ACTTGAAAAAAGATTATAAA+AGG | + | chr8_1:78638018-78638037 | Msa1216710:intron | 15.0% |
| !!! | TACTAATTTGTCAATAATAT+AGG | - | chr8_1:78639020-78639039 | None:intergenic | 15.0% |
| !! | ATAAATGGATATTATTATAC+TGG | - | chr8_1:78639069-78639088 | None:intergenic | 15.0% |
| !! | TGAATGCATTAAAATTTAAA+AGG | + | chr8_1:78639494-78639513 | Msa1216710:intron | 15.0% |
| !!! | TTTTTTTTGACAAAGAAAAT+AGG | + | chr8_1:78641573-78641592 | Msa1216710:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGACAAAGAAAATA+GGG | + | chr8_1:78641574-78641593 | Msa1216710:three_prime_UTR | 15.0% |
| !!! | TAATTTTGTGCAAAATGAAA+TGG | + | chr8_1:78635510-78635529 | Msa1216710:CDS | 20.0% |
| !!! | AATTTTGTGCAAAATGAAAT+GGG | + | chr8_1:78635511-78635530 | Msa1216710:CDS | 20.0% |
| !! | AAACATCTTATGACAAATAA+TGG | - | chr8_1:78635734-78635753 | None:intergenic | 20.0% |
| !! | AAAAGTTCCATTGAATTTAT+AGG | + | chr8_1:78636431-78636450 | Msa1216710:intron | 20.0% |
| !! | ATGTTAAATACAACCATAAA+AGG | - | chr8_1:78636489-78636508 | None:intergenic | 20.0% |
| !! | TCAAATTGAAATGATATTGT+AGG | + | chr8_1:78637675-78637694 | Msa1216710:intron | 20.0% |
| !! | ATACTCATTCAAAACTTTAA+GGG | - | chr8_1:78638668-78638687 | None:intergenic | 20.0% |
| !! | ATACATACTTGCATTATTAA+AGG | + | chr8_1:78638823-78638842 | Msa1216710:intron | 20.0% |
| !!! | TAATTTGTCAATAATATAGG+AGG | - | chr8_1:78639017-78639036 | None:intergenic | 20.0% |
| !! | TAATATCCATTTATGATGAT+AGG | + | chr8_1:78639075-78639094 | Msa1216710:intron | 20.0% |
| !! | CTAAAGATTAAGTAAGAAAA+AGG | - | chr8_1:78640232-78640251 | None:intergenic | 20.0% |
| !!! | TAAAATTAGAAAGTGTAAAG+AGG | - | chr8_1:78640643-78640662 | None:intergenic | 20.0% |
| !! | ATATATAAAGTATGTTTGCT+AGG | + | chr8_1:78641001-78641020 | Msa1216710:intron | 20.0% |
| ! | CTAAAACACTAAACACAATA+TGG | + | chr8_1:78635260-78635279 | Msa1216710:intron | 25.0% |
| !! | ATTTTGTGCAAAATGAAATG+GGG | + | chr8_1:78635512-78635531 | Msa1216710:CDS | 25.0% |
| ! | CAAAGTGAAATATAAGGAAT+AGG | - | chr8_1:78635602-78635621 | None:intergenic | 25.0% |
| ! | CTTTACACATGACATAATAA+AGG | - | chr8_1:78635895-78635914 | None:intergenic | 25.0% |
| ! | CTTTATTATGTCATGTGTAA+AGG | + | chr8_1:78635893-78635912 | Msa1216710:intron | 25.0% |
| ! | ATTAAAGAAATCGCAAACAA+TGG | + | chr8_1:78635968-78635987 | Msa1216710:intron | 25.0% |
| !!! | TATTTGCTATATAATCACAG+CGG | - | chr8_1:78636035-78636054 | None:intergenic | 25.0% |
| ! | ATATATATAGTACTAGTGGA+GGG | + | chr8_1:78636104-78636123 | Msa1216710:intron | 25.0% |
| ! | ATAACTTGAAGTTAAAAACC+TGG | - | chr8_1:78636307-78636326 | None:intergenic | 25.0% |
| !! | TTTAGTATCTTCCATTGATT+TGG | + | chr8_1:78636804-78636823 | Msa1216710:intron | 25.0% |
| ! | AAAAGTTTCAACCAAATCAA+TGG | - | chr8_1:78636818-78636837 | None:intergenic | 25.0% |
| ! | TGTATGTTATACTTAGGTAA+TGG | + | chr8_1:78636840-78636859 | Msa1216710:intron | 25.0% |
| !!! | AACCAAATTTTTGAGATCAT+TGG | - | chr8_1:78636947-78636966 | None:intergenic | 25.0% |
| ! | GAAACATTAATCAGATAACT+GGG | + | chr8_1:78637190-78637209 | Msa1216710:CDS | 25.0% |
| ! | AATATTCAATCTATGGTGTT+TGG | + | chr8_1:78637231-78637250 | Msa1216710:CDS | 25.0% |
| ! | TAATTAACGTAATCCATGTA+CGG | + | chr8_1:78637892-78637911 | Msa1216710:intron | 25.0% |
| !! | TCATTTTGCTAAATAATGCA+CGG | + | chr8_1:78638048-78638067 | Msa1216710:intron | 25.0% |
| !!! | AAGTTTACTTGTTTAGTTTG+AGG | + | chr8_1:78638197-78638216 | Msa1216710:intron | 25.0% |
| ! | AAAAGAGATAAGGAAAATGA+TGG | - | chr8_1:78638376-78638395 | None:intergenic | 25.0% |
| ! | AAGACATTGGATATAATGAA+GGG | - | chr8_1:78638404-78638423 | None:intergenic | 25.0% |
| ! | TAAGACATTGGATATAATGA+AGG | - | chr8_1:78638405-78638424 | None:intergenic | 25.0% |
| ! | TTCATTATATCCAATGTCTT+AGG | + | chr8_1:78638404-78638423 | Msa1216710:intron | 25.0% |
| ! | TCATTATATCCAATGTCTTA+GGG | + | chr8_1:78638405-78638424 | Msa1216710:intron | 25.0% |
| ! | GATACTCATTCAAAACTTTA+AGG | - | chr8_1:78638669-78638688 | None:intergenic | 25.0% |
| ! | TAGAGATACTTTATACATAC+TGG | - | chr8_1:78638735-78638754 | None:intergenic | 25.0% |
| ! | TACTTGCATTATTAAAGGTA+AGG | + | chr8_1:78638828-78638847 | Msa1216710:intron | 25.0% |
| ! | CAATGATATGAGTGAAATTA+CGG | - | chr8_1:78639329-78639348 | None:intergenic | 25.0% |
| ! | TGTTTCAGTTAGTTATAACA+AGG | - | chr8_1:78639472-78639491 | None:intergenic | 25.0% |
| ! | CAAACTTATAGCATATAAAG+AGG | - | chr8_1:78639587-78639606 | None:intergenic | 25.0% |
| ! | CTCTTTATATGCTATAAGTT+TGG | + | chr8_1:78639585-78639604 | Msa1216710:intron | 25.0% |
| ! | TCAAAATCTGATTGTTGATA+AGG | - | chr8_1:78639714-78639733 | None:intergenic | 25.0% |
| !! | TTATCAACAATCAGATTTTG+AGG | + | chr8_1:78639713-78639732 | Msa1216710:CDS | 25.0% |
| !! | TATCAACAATCAGATTTTGA+GGG | + | chr8_1:78639714-78639733 | Msa1216710:CDS | 25.0% |
| ! | CTACTGATAAATTATGAACT+TGG | - | chr8_1:78640012-78640031 | None:intergenic | 25.0% |
| ! | CAAGTTCATAATTTATCAGT+AGG | + | chr8_1:78640010-78640029 | Msa1216710:intron | 25.0% |
| ! | TCAAACATCAGTAAATCATA+GGG | - | chr8_1:78640050-78640069 | None:intergenic | 25.0% |
| ! | ATGATAGATGTGAAACAAAT+CGG | - | chr8_1:78640263-78640282 | None:intergenic | 25.0% |
| !!! | TAACATGAAGCAACATTTTT+TGG | + | chr8_1:78640331-78640350 | Msa1216710:intron | 25.0% |
| !!! | GAAGCAGATTTTTTTTCATT+CGG | + | chr8_1:78640688-78640707 | Msa1216710:CDS | 25.0% |
| ! | GGAAATAACGATAAAAGTAA+TGG | - | chr8_1:78640938-78640957 | None:intergenic | 25.0% |
| ! | TATTTCCATTATTGCATAGT+TGG | + | chr8_1:78640951-78640970 | Msa1216710:intron | 25.0% |
| ! | ACATTATTGACAACAATTAC+AGG | + | chr8_1:78641055-78641074 | Msa1216710:intron | 25.0% |
| ! | TGTTAAGTTACCTTCAAATT+TGG | - | chr8_1:78641146-78641165 | None:intergenic | 25.0% |
| ! | CATCTTGGTTATTCTTAATA+TGG | + | chr8_1:78641197-78641216 | Msa1216710:intron | 25.0% |
| !! | GATTAATTACGTTGATTATC+AGG | + | chr8_1:78641241-78641260 | Msa1216710:intron | 25.0% |
| ! | AACCAAAAATCTAACCTAAA+TGG | - | chr8_1:78641350-78641369 | None:intergenic | 25.0% |
| ! | GTAGTCAAATTGAAAATTTG+AGG | + | chr8_1:78641404-78641423 | Msa1216710:intron | 25.0% |
| ! | GCAAAATAATTGTGGTTTAT+TGG | + | chr8_1:78641532-78641551 | Msa1216710:three_prime_UTR | 25.0% |
| ! | TTATTGGAGAAAACATTGTT+TGG | + | chr8_1:78641548-78641567 | Msa1216710:three_prime_UTR | 25.0% |
| TAGATAAAGAATGCTTACCA+AGG | - | chr8_1:78635173-78635192 | None:intergenic | 30.0% | |
| AAACACAATATGGCAAAACA+AGG | + | chr8_1:78635270-78635289 | Msa1216710:intron | 30.0% | |
| TAAAGAAAGCAGCAATTCAA+AGG | - | chr8_1:78635331-78635350 | None:intergenic | 30.0% | |
| TGCTTTCTTTATGTGTAGTT+GGG | + | chr8_1:78635340-78635359 | Msa1216710:intron | 30.0% | |
| ! | TTTTGTGCAAAATGAAATGG+GGG | + | chr8_1:78635513-78635532 | Msa1216710:CDS | 30.0% |
| TTGGGACAAAGTGAAATATA+AGG | - | chr8_1:78635608-78635627 | None:intergenic | 30.0% | |
| GTGTAAAGGAACTAGAAAAA+TGG | + | chr8_1:78635907-78635926 | Msa1216710:intron | 30.0% | |
| GGAACTAGAAAAATGGTATA+AGG | + | chr8_1:78635914-78635933 | Msa1216710:intron | 30.0% | |
| AGATAAAATTGGCCAAACAA+CGG | - | chr8_1:78636011-78636030 | None:intergenic | 30.0% | |
| ATATATTACTGGAGTGAAGT+AGG | + | chr8_1:78636062-78636081 | Msa1216710:intron | 30.0% | |
| TATATTACTGGAGTGAAGTA+GGG | + | chr8_1:78636063-78636082 | Msa1216710:intron | 30.0% | |
| AGCCATATATATAGTACTAG+TGG | + | chr8_1:78636100-78636119 | Msa1216710:intron | 30.0% | |
| CTCCACTAGTACTATATATA+TGG | - | chr8_1:78636105-78636124 | None:intergenic | 30.0% | |
| CATATATATAGTACTAGTGG+AGG | + | chr8_1:78636103-78636122 | Msa1216710:intron | 30.0% | |
| AGTATATAAACCGTTGAGTA+TGG | - | chr8_1:78636196-78636215 | None:intergenic | 30.0% | |
| AACGGTTTATATACTCAAGA+AGG | + | chr8_1:78636201-78636220 | Msa1216710:intron | 30.0% | |
| CGCAACTTAGGATTTATATA+AGG | + | chr8_1:78636231-78636250 | Msa1216710:intron | 30.0% | |
| AGTATTGCTTAGCTCAATTT+AGG | + | chr8_1:78636272-78636291 | Msa1216710:intron | 30.0% | |
| ! | CAATTTAGGATGTATATTCC+AGG | + | chr8_1:78636286-78636305 | Msa1216710:intron | 30.0% |
| ACGTACACCTATAAATTCAA+TGG | - | chr8_1:78636441-78636460 | None:intergenic | 30.0% | |
| CTAAAAGATGACGTTCATTA+AGG | - | chr8_1:78636789-78636808 | None:intergenic | 30.0% | |
| GAAAAGCTAAAGCAATCAAA+AGG | + | chr8_1:78636895-78636914 | Msa1216710:CDS | 30.0% | |
| AGCCAATGATCTCAAAAATT+TGG | + | chr8_1:78636942-78636961 | Msa1216710:CDS | 30.0% | |
| AATGTCTATGTTGAAGCTAA+GGG | + | chr8_1:78636979-78636998 | Msa1216710:CDS | 30.0% | |
| ! | ATAAATCAAGAGAGGTTTTG+TGG | - | chr8_1:78637086-78637105 | None:intergenic | 30.0% |
| TGCAATTGATAAATCAAGAG+AGG | - | chr8_1:78637094-78637113 | None:intergenic | 30.0% | |
| !! | TTAAAGCTGTTTTCAACTCT+TGG | + | chr8_1:78637142-78637161 | Msa1216710:CDS | 30.0% |
| !! | TAAAGCTGTTTTCAACTCTT+GGG | + | chr8_1:78637143-78637162 | Msa1216710:CDS | 30.0% |
| CGAAACATTAATCAGATAAC+TGG | + | chr8_1:78637189-78637208 | Msa1216710:CDS | 30.0% | |
| TGCTGTGAATATTCAATCTA+TGG | + | chr8_1:78637224-78637243 | Msa1216710:CDS | 30.0% | |
| ! | ATCTATGGTGTTTGGTAATA+TGG | + | chr8_1:78637239-78637258 | Msa1216710:CDS | 30.0% |
| ! | TCTATGGTGTTTGGTAATAT+GGG | + | chr8_1:78637240-78637259 | Msa1216710:CDS | 30.0% |
| ACTGGTGAAAAGAAACTTTA+TGG | + | chr8_1:78637306-78637325 | Msa1216710:CDS | 30.0% | |
| CTACTAAATGCAAATCATAG+TGG | - | chr8_1:78637398-78637417 | None:intergenic | 30.0% | |
| AATTCTTGAGAATCACTACA+AGG | + | chr8_1:78637570-78637589 | Msa1216710:CDS | 30.0% | |
| CTGTTCAAGAAAATAGATTG+TGG | + | chr8_1:78637710-78637729 | Msa1216710:CDS | 30.0% | |
| AATCAAAATAGCTACAGACA+TGG | + | chr8_1:78637774-78637793 | Msa1216710:CDS | 30.0% | |
| TACAACAATGTATATACCTG+TGG | - | chr8_1:78637874-78637893 | None:intergenic | 30.0% | |
| AAATACTATATAATCGTGCG+AGG | - | chr8_1:78637979-78637998 | None:intergenic | 30.0% | |
| TCGCACGATTATATAGTATT+TGG | + | chr8_1:78637978-78637997 | Msa1216710:intron | 30.0% | |
| ACTTTGTTCTTGTACTTAGA+TGG | - | chr8_1:78638225-78638244 | None:intergenic | 30.0% | |
| ATCTAAGTACAAGAACAAAG+TGG | + | chr8_1:78638224-78638243 | Msa1216710:CDS | 30.0% | |
| AGACATTGGATATAATGAAG+GGG | - | chr8_1:78638403-78638422 | None:intergenic | 30.0% | |
| ! | AAAACTTTAAGGGTGTGTTT+GGG | - | chr8_1:78638658-78638677 | None:intergenic | 30.0% |
| AGTATCAATCCATTTGTGTT+TGG | + | chr8_1:78638683-78638702 | Msa1216710:intron | 30.0% | |
| CTAGTCATGAAACTAAATCT+AGG | - | chr8_1:78638766-78638785 | None:intergenic | 30.0% | |
| ! | CTAGATTTAGTTTCATGACT+AGG | + | chr8_1:78638764-78638783 | Msa1216710:intron | 30.0% |
| AGACTCGTTTACTTCAATAT+TGG | - | chr8_1:78638984-78639003 | None:intergenic | 30.0% | |
| TATCCATTTATGATGATAGG+TGG | + | chr8_1:78639078-78639097 | Msa1216710:intron | 30.0% | |
| ATTTGGAAACTTTCATGTCT+TGG | + | chr8_1:78639215-78639234 | Msa1216710:CDS | 30.0% | |
| TTTGGAAACTTTCATGTCTT+GGG | + | chr8_1:78639216-78639235 | Msa1216710:CDS | 30.0% | |
| TCATATCATTGTTGTGTATC+AGG | + | chr8_1:78639338-78639357 | Msa1216710:intron | 30.0% | |
| !!! | AGTTTTTTGCTTCAGATGAA+AGG | + | chr8_1:78639616-78639635 | Msa1216710:intron | 30.0% |
| AAGAAGCAGAAATATTCTCT+AGG | + | chr8_1:78639862-78639881 | Msa1216710:CDS | 30.0% | |
| GTCAAACATCAGTAAATCAT+AGG | - | chr8_1:78640051-78640070 | None:intergenic | 30.0% | |
| CAATTTGTAATCATGTGAAC+AGG | + | chr8_1:78640070-78640089 | Msa1216710:intron | 30.0% | |
| GACATCAAGTGAGTTTAATA+AGG | + | chr8_1:78640423-78640442 | Msa1216710:CDS | 30.0% | |
| TCATTTGCAATCTACACAAA+TGG | - | chr8_1:78640670-78640689 | None:intergenic | 30.0% | |
| AATCAAAATGTGCACAGAAA+AGG | + | chr8_1:78641106-78641125 | Msa1216710:CDS | 30.0% | |
| ATCAAAATGTGCACAGAAAA+GGG | + | chr8_1:78641107-78641126 | Msa1216710:CDS | 30.0% | |
| TACTGCTAAACCAAATTTGA+AGG | + | chr8_1:78641133-78641152 | Msa1216710:CDS | 30.0% | |
| CAAAATTTGATCACACATCT+TGG | + | chr8_1:78641182-78641201 | Msa1216710:intron | 30.0% | |
| ! | AATTACGTTGATTATCAGGT+TGG | + | chr8_1:78641245-78641264 | Msa1216710:intron | 30.0% |
| !! | CTCCATTTAGGTTAGATTTT+TGG | + | chr8_1:78641345-78641364 | Msa1216710:intron | 30.0% |
| AAACAAAGCAATGAAGTCCT+TGG | + | chr8_1:78635153-78635172 | Msa1216710:exon | 35.0% | |
| CTGCTTTCTTTATGTGTAGT+TGG | + | chr8_1:78635339-78635358 | Msa1216710:intron | 35.0% | |
| TTTCTTTATGTGTAGTTGGG+AGG | + | chr8_1:78635343-78635362 | Msa1216710:intron | 35.0% | |
| TTGATATTCTCGACATGCTT+CGG | - | chr8_1:78635437-78635456 | None:intergenic | 35.0% | |
| AATGTGAAGAACCTACCAAA+TGG | + | chr8_1:78635460-78635479 | Msa1216710:CDS | 35.0% | |
| !! | TTTTGAAGGATTCCCAAGAA+AGG | - | chr8_1:78635539-78635558 | None:intergenic | 35.0% |
| TCCCAACACTTGATTGAATT+GGG | + | chr8_1:78635622-78635641 | Msa1216710:intron | 35.0% | |
| ACCCAATTCAATCAAGTGTT+GGG | - | chr8_1:78635626-78635645 | None:intergenic | 35.0% | |
| AACCCAATTCAATCAAGTGT+TGG | - | chr8_1:78635627-78635646 | None:intergenic | 35.0% | |
| TATGCGTAATGCATAAGCAT+TGG | + | chr8_1:78635662-78635681 | Msa1216710:intron | 35.0% | |
| AGGTTGAAACACTCATTGTT+TGG | - | chr8_1:78635853-78635872 | None:intergenic | 35.0% | |
| TCAACCTCTGATCACATTTA+AGG | + | chr8_1:78635866-78635885 | Msa1216710:intron | 35.0% | |
| GATCATTTGTTTCCGTTGTT+TGG | + | chr8_1:78635996-78636015 | Msa1216710:intron | 35.0% | |
| ATCACAGCGGTAGATAAAAT+TGG | - | chr8_1:78636022-78636041 | None:intergenic | 35.0% | |
| TCACATATAGACACAGAAGA+GGG | - | chr8_1:78636172-78636191 | None:intergenic | 35.0% | |
| TATATGTGAGCCATACTCAA+CGG | + | chr8_1:78636183-78636202 | Msa1216710:intron | 35.0% | |
| !! | GGAACTTTTCAGTTTTCAAG+TGG | - | chr8_1:78636420-78636439 | None:intergenic | 35.0% |
| TGGAAATCTGATAGATGTAG+AGG | - | chr8_1:78636537-78636556 | None:intergenic | 35.0% | |
| ATGGACACAGTTCTTAATCT+TGG | + | chr8_1:78636568-78636587 | Msa1216710:CDS | 35.0% | |
| TCTTGGATTGAATGATGAAG+TGG | + | chr8_1:78636585-78636604 | Msa1216710:CDS | 35.0% | |
| AGACGTTTCTTAGACATGTT+TGG | + | chr8_1:78636658-78636677 | Msa1216710:CDS | 35.0% | |
| !! | TATTGCTTAGAGAAGTGTTG+CGG | - | chr8_1:78636734-78636753 | None:intergenic | 35.0% |
| ! | CGTTCATTAAGGAAGTGTAT+TGG | - | chr8_1:78636778-78636797 | None:intergenic | 35.0% |
| TATTCCACACTCATTGTTTG+AGG | + | chr8_1:78636864-78636883 | Msa1216710:CDS | 35.0% | |
| !! | AAAGGCATTAAACATGACAC+AGG | + | chr8_1:78636913-78636932 | Msa1216710:CDS | 35.0% |
| GAATGTCTATGTTGAAGCTA+AGG | + | chr8_1:78636978-78636997 | Msa1216710:CDS | 35.0% | |
| ! | GCTAATTCTAGTTGCTTCTT+TGG | - | chr8_1:78637120-78637139 | None:intergenic | 35.0% |
| TTTCGATACTTAATAGCCCT+TGG | - | chr8_1:78637174-78637193 | None:intergenic | 35.0% | |
| TAATCAGATAACTGGGCTAA+TGG | + | chr8_1:78637197-78637216 | Msa1216710:CDS | 35.0% | |
| AATCAGATAACTGGGCTAAT+GGG | + | chr8_1:78637198-78637217 | Msa1216710:CDS | 35.0% | |
| GGTAATATGGGAAATACTTC+AGG | + | chr8_1:78637252-78637271 | Msa1216710:CDS | 35.0% | |
| TCAAGTTCCTTATAAGCATC+TGG | - | chr8_1:78637538-78637557 | None:intergenic | 35.0% | |
| AGATGCTTATAAGGAACTTG+AGG | + | chr8_1:78637537-78637556 | Msa1216710:CDS | 35.0% | |
| GAATCACTACAAGGATATGA+TGG | + | chr8_1:78637579-78637598 | Msa1216710:CDS | 35.0% | |
| TATTCGTTCTGCAATCAAGA+TGG | + | chr8_1:78637816-78637835 | Msa1216710:CDS | 35.0% | |
| AGGAACTGATTAAGATGTTG+TGG | - | chr8_1:78637847-78637866 | None:intergenic | 35.0% | |
| ATGTATATACCTGTGGATGT+AGG | - | chr8_1:78637867-78637886 | None:intergenic | 35.0% | |
| AGTTAAAGGAAAACCGTACA+TGG | - | chr8_1:78637908-78637927 | None:intergenic | 35.0% | |
| !! | ACAAGGAAAGAGTGCAATTT+TGG | + | chr8_1:78638329-78638348 | Msa1216710:CDS | 35.0% |
| AAGGGGGAAAAAAAGAGATA+AGG | - | chr8_1:78638386-78638405 | None:intergenic | 35.0% | |
| GACATTGGATATAATGAAGG+GGG | - | chr8_1:78638402-78638421 | None:intergenic | 35.0% | |
| ! | CAAAACTTTAAGGGTGTGTT+TGG | - | chr8_1:78638659-78638678 | None:intergenic | 35.0% |
| !! | ACTGGTTTGATCTCTATGAT+GGG | - | chr8_1:78638717-78638736 | None:intergenic | 35.0% |
| !! | TACTGGTTTGATCTCTATGA+TGG | - | chr8_1:78638718-78638737 | None:intergenic | 35.0% |
| TGAAGTAAACGAGTCTAGAA+AGG | + | chr8_1:78638988-78639007 | Msa1216710:CDS | 35.0% | |
| TGGTAATATCAGAAGGAGAA+TGG | + | chr8_1:78639119-78639138 | Msa1216710:CDS | 35.0% | |
| TGATCAAATAAGGAAGCTGA+AGG | + | chr8_1:78639240-78639259 | Msa1216710:CDS | 35.0% | |
| ! | CATTGTTGTGTATCAGGTTT+TGG | + | chr8_1:78639344-78639363 | Msa1216710:intron | 35.0% |
| GCAATAACAGCTAGAAGAAA+TGG | + | chr8_1:78639390-78639409 | Msa1216710:CDS | 35.0% | |
| CTAACAATCGGATTGTTACT+GGG | - | chr8_1:78639764-78639783 | None:intergenic | 35.0% | |
| TCTAACAATCGGATTGTTAC+TGG | - | chr8_1:78639765-78639784 | None:intergenic | 35.0% | |
| TCAGGAAGAAATTCATGAAG+TGG | - | chr8_1:78639792-78639811 | None:intergenic | 35.0% | |
| CTTCATGAATTTCTTCCTGA+AGG | + | chr8_1:78639792-78639811 | Msa1216710:CDS | 35.0% | |
| TAGGATTGAAAAACTCTCTG+AGG | + | chr8_1:78639881-78639900 | Msa1216710:CDS | 35.0% | |
| CACATGACTGATGTTTAGTT+TGG | + | chr8_1:78639981-78640000 | Msa1216710:intron | 35.0% | |
| ! | TGTAGTTCTACCAGAGATAA+TGG | + | chr8_1:78640176-78640195 | Msa1216710:CDS | 35.0% |
| ATAAGTGGAACCATTATCTC+TGG | - | chr8_1:78640189-78640208 | None:intergenic | 35.0% | |
| ! | GAGATAATGGTTCCACTTAT+TGG | + | chr8_1:78640189-78640208 | Msa1216710:intron | 35.0% |
| !! | CCTGCTAGTTAAAGAGTATT+GGG | - | chr8_1:78640397-78640416 | None:intergenic | 35.0% |
| ! | TCCTGCTAGTTAAAGAGTAT+TGG | - | chr8_1:78640398-78640417 | None:intergenic | 35.0% |
| TCTTCTCTAAGCTATAAGGT+TGG | + | chr8_1:78640479-78640498 | Msa1216710:CDS | 35.0% | |
| ! | ACTGTAGCCAAATGTCATTT+GGG | - | chr8_1:78640728-78640747 | None:intergenic | 35.0% |
| TACTGTAGCCAAATGTCATT+TGG | - | chr8_1:78640729-78640748 | None:intergenic | 35.0% | |
| !! | GATTATCAGGTTGGAATATG+CGG | + | chr8_1:78641254-78641273 | Msa1216710:intron | 35.0% |
| GCAAAGAATGCAATAGAAGA+CGG | - | chr8_1:78641296-78641315 | None:intergenic | 35.0% | |
| ATTGCATTCTTTGCTCAACT+TGG | + | chr8_1:78641302-78641321 | Msa1216710:CDS | 35.0% | |
| ! | AAATTTGAGGACTCTTTTGC+AGG | + | chr8_1:78641417-78641436 | Msa1216710:intron | 35.0% |
| CTACAGCTGCAAAATAATTG+TGG | + | chr8_1:78641524-78641543 | Msa1216710:three_prime_UTR | 35.0% | |
| ATCACTTCTACCTTTGCCAA+AGG | - | chr8_1:78635131-78635150 | None:intergenic | 40.0% | |
| TTTGGCAAAGGTAGAAGTGA+TGG | + | chr8_1:78635130-78635149 | Msa1216710:five_prime_UTR | 40.0% | |
| TTATGTGTAGTTGGGAGGAA+AGG | + | chr8_1:78635348-78635367 | Msa1216710:intron | 40.0% | |
| TATGTGTAGTTGGGAGGAAA+GGG | + | chr8_1:78635349-78635368 | Msa1216710:intron | 40.0% | |
| TTGGCAGAAATGGCAACAAT+TGG | + | chr8_1:78635379-78635398 | Msa1216710:CDS | 40.0% | |
| AGAACCTACCAAATGGTTTG+TGG | + | chr8_1:78635467-78635486 | Msa1216710:CDS | 40.0% | |
| ! | GAACCTACCAAATGGTTTGT+GGG | + | chr8_1:78635468-78635487 | Msa1216710:CDS | 40.0% |
| GTCCCAACACTTGATTGAAT+TGG | + | chr8_1:78635621-78635640 | Msa1216710:intron | 40.0% | |
| !!! | CATTGGTGGTGACACTTTTT+GGG | + | chr8_1:78635679-78635698 | Msa1216710:intron | 40.0% |
| GTGACCTTAAATGTGATCAG+AGG | - | chr8_1:78635873-78635892 | None:intergenic | 40.0% | |
| CACATATAGACACAGAAGAG+GGG | - | chr8_1:78636171-78636190 | None:intergenic | 40.0% | |
| CTCACATATAGACACAGAAG+AGG | - | chr8_1:78636173-78636192 | None:intergenic | 40.0% | |
| GAAGGAAAGTAACGCAACTT+AGG | + | chr8_1:78636219-78636238 | Msa1216710:intron | 40.0% | |
| ATCTATCAGATTTCCATGCC+TGG | + | chr8_1:78636541-78636560 | Msa1216710:intron | 40.0% | |
| TTGAATGATGAAGTGGTTGC+TGG | + | chr8_1:78636592-78636611 | Msa1216710:CDS | 40.0% | |
| TGAATGATGAAGTGGTTGCT+GGG | + | chr8_1:78636593-78636612 | Msa1216710:CDS | 40.0% | |
| TTGTCCTCAAACAATGAGTG+TGG | - | chr8_1:78636871-78636890 | None:intergenic | 40.0% | |
| !! | ATCAAGAGAGGTTTTGTGGA+TGG | - | chr8_1:78637082-78637101 | None:intergenic | 40.0% |
| ATGGGAAATACTTCAGGAAC+TGG | + | chr8_1:78637258-78637277 | Msa1216710:CDS | 40.0% | |
| TTCACTAGAAATCCAAGCAC+TGG | + | chr8_1:78637288-78637307 | Msa1216710:CDS | 40.0% | |
| ! | AGTTTCTTTTCACCAGTGCT+TGG | - | chr8_1:78637303-78637322 | None:intergenic | 40.0% |
| AGAGTTTCTCACTAATGCTC+AGG | + | chr8_1:78637329-78637348 | Msa1216710:CDS | 40.0% | |
| AAGATGTAGTTGCTGGAATC+AGG | + | chr8_1:78637476-78637495 | Msa1216710:CDS | 40.0% | |
| TTGCATGCCAGATGCTTATA+AGG | + | chr8_1:78637528-78637547 | Msa1216710:CDS | 40.0% | |
| TGGATGTTGCAATGTCGAAT+TGG | + | chr8_1:78637730-78637749 | Msa1216710:CDS | 40.0% | |
| ! | ATTGGAAAGCGTACTGGTAA+AGG | + | chr8_1:78637748-78637767 | Msa1216710:CDS | 40.0% |
| TAATCAGTTCCTACATCCAC+AGG | + | chr8_1:78637855-78637874 | Msa1216710:CDS | 40.0% | |
| CAATGTCTTAGGGTGTGTTT+GGG | + | chr8_1:78638415-78638434 | Msa1216710:intron | 40.0% | |
| TTTGGGAAGAGGGTTTAGTA+GGG | + | chr8_1:78638432-78638451 | Msa1216710:intron | 40.0% | |
| TTTGGGAAAAGGGTTTAGGA+GGG | - | chr8_1:78638641-78638660 | None:intergenic | 40.0% | |
| TGTGTTTGGGAAAAGGGTTT+AGG | - | chr8_1:78638645-78638664 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGGAAAA+GGG | - | chr8_1:78638651-78638670 | None:intergenic | 40.0% |
| ! | TTAAGGGTGTGTTTGGGAAA+AGG | - | chr8_1:78638652-78638671 | None:intergenic | 40.0% |
| GCTAAGAGACCAAACACAAA+TGG | - | chr8_1:78638695-78638714 | None:intergenic | 40.0% | |
| CCACCACCTATCATCATAAA+TGG | - | chr8_1:78639084-78639103 | None:intergenic | 40.0% | |
| CCATTTATGATGATAGGTGG+TGG | + | chr8_1:78639081-78639100 | Msa1216710:intron | 40.0% | |
| TGTCTTGGGCTGATCAAATA+AGG | + | chr8_1:78639230-78639249 | Msa1216710:CDS | 40.0% | |
| CTAGCTGTTATTGCATCTTC+AGG | - | chr8_1:78639384-78639403 | None:intergenic | 40.0% | |
| AGAAATGGTGCACAAGGAAT+TGG | + | chr8_1:78639405-78639424 | Msa1216710:CDS | 40.0% | |
| TGCTTCAGATGAAAGGCTAA+AGG | + | chr8_1:78639623-78639642 | Msa1216710:CDS | 40.0% | |
| TTTCCTCTGTTCTTGCGTAA+TGG | - | chr8_1:78639670-78639689 | None:intergenic | 40.0% | |
| GAAGTGGAGGATCTAACAAT+CGG | - | chr8_1:78639776-78639795 | None:intergenic | 40.0% | |
| GGAAGAAATTCATGAAGTGG+AGG | - | chr8_1:78639789-78639808 | None:intergenic | 40.0% | |
| ATTTCTTCCTGAAGGTGACT+TGG | + | chr8_1:78639800-78639819 | Msa1216710:CDS | 40.0% | |
| CACGCAAGCATCATATTAAG+CGG | - | chr8_1:78639947-78639966 | None:intergenic | 40.0% | |
| TTGTAATCATGTGAACAGGC+TGG | + | chr8_1:78640074-78640093 | Msa1216710:intron | 40.0% | |
| TGTAATCATGTGAACAGGCT+GGG | + | chr8_1:78640075-78640094 | Msa1216710:intron | 40.0% | |
| AAGAAAAAGGAACATGCCTG+TGG | - | chr8_1:78640219-78640238 | None:intergenic | 40.0% | |
| CCCAATACTCTTTAACTAGC+AGG | + | chr8_1:78640394-78640413 | Msa1216710:intron | 40.0% | |
| !! | TGAGAAAGTGTTCTCTGAGA+TGG | + | chr8_1:78640454-78640473 | Msa1216710:CDS | 40.0% |
| !! | GAGAAAGTGTTCTCTGAGAT+GGG | + | chr8_1:78640455-78640474 | Msa1216710:CDS | 40.0% |
| GGGTTCTTCTCTAAGCTATA+AGG | + | chr8_1:78640475-78640494 | Msa1216710:CDS | 40.0% | |
| ! | TGTCATTTGGGTAAGGTCAT+TGG | - | chr8_1:78640716-78640735 | None:intergenic | 40.0% |
| GACCTTACCCAAATGACATT+TGG | + | chr8_1:78640718-78640737 | Msa1216710:CDS | 40.0% | |
| ! | AGCCAAATGTCATTTGGGTA+AGG | - | chr8_1:78640723-78640742 | None:intergenic | 40.0% |
| TTCCTTCATACCTTTCTGCT+GGG | + | chr8_1:78640770-78640789 | Msa1216710:CDS | 40.0% | |
| CTATGCAACTAACCTCGAAT+GGG | - | chr8_1:78640810-78640829 | None:intergenic | 40.0% | |
| ACTATGCAACTAACCTCGAA+TGG | - | chr8_1:78640811-78640830 | None:intergenic | 40.0% | |
| ! | AGGTTAGTTGCATAGTTGTG+TGG | + | chr8_1:78640815-78640834 | Msa1216710:intron | 40.0% |
| TCGCACCAACTATGCAATAA+TGG | - | chr8_1:78640959-78640978 | None:intergenic | 40.0% | |
| ! | TTATTGCATAGTTGGTGCGA+TGG | + | chr8_1:78640959-78640978 | Msa1216710:intron | 40.0% |
| TTACAGGTACTTGACCAGAA+AGG | + | chr8_1:78641071-78641090 | Msa1216710:intron | 40.0% | |
| ATGTCTCGTGTTCTCCATTT+AGG | + | chr8_1:78641333-78641352 | Msa1216710:CDS | 40.0% | |
| TTTGCAGGATTCCAATTGCT+AGG | + | chr8_1:78641432-78641451 | Msa1216710:intron | 40.0% | |
| ATTGGATTATCTGTGCCTCC+TGG | + | chr8_1:78635397-78635416 | Msa1216710:CDS | 45.0% | |
| GTTGATATAGTGAGTCCAGG+AGG | - | chr8_1:78635415-78635434 | None:intergenic | 45.0% | |
| ! | TCGGTTGATATAGTGAGTCC+AGG | - | chr8_1:78635418-78635437 | None:intergenic | 45.0% |
| ATCTCCTCCCACAAACCATT+TGG | - | chr8_1:78635478-78635497 | None:intergenic | 45.0% | |
| TTGTGGGAGGAGATACTTGA+AGG | + | chr8_1:78635484-78635503 | Msa1216710:CDS | 45.0% | |
| AATGAAATGGGGGCCTTTCT+TGG | + | chr8_1:78635523-78635542 | Msa1216710:CDS | 45.0% | |
| ATGAAATGGGGGCCTTTCTT+GGG | + | chr8_1:78635524-78635543 | Msa1216710:CDS | 45.0% | |
| !! | GAGACAAGGAGAGGTTTTGA+AGG | - | chr8_1:78635553-78635572 | None:intergenic | 45.0% |
| !! | GCGTAATGCATAAGCATTGG+TGG | + | chr8_1:78635665-78635684 | Msa1216710:intron | 45.0% |
| !!! | GCATTGGTGGTGACACTTTT+TGG | + | chr8_1:78635678-78635697 | Msa1216710:intron | 45.0% |
| GATTTCCATGCCTGGAATGA+TGG | + | chr8_1:78636549-78636568 | Msa1216710:intron | 45.0% | |
| AGAACTGTGTCCATCATTCC+AGG | - | chr8_1:78636562-78636581 | None:intergenic | 45.0% | |
| TGGCTTCAAAAAGTGGAGAG+CGG | + | chr8_1:78636617-78636636 | Msa1216710:CDS | 45.0% | |
| AAGGGAGAAAAGTTTCCCTC+AGG | + | chr8_1:78636997-78637016 | Msa1216710:CDS | 45.0% | |
| GTGTTGAAGTTAGCACCTGA+GGG | - | chr8_1:78637015-78637034 | None:intergenic | 45.0% | |
| ! | AGTGTTGAAGTTAGCACCTG+AGG | - | chr8_1:78637016-78637035 | None:intergenic | 45.0% |
| TCAACTCTTGGGATAGTCCA+AGG | + | chr8_1:78637154-78637173 | Msa1216710:CDS | 45.0% | |
| CAACTCTTGGGATAGTCCAA+GGG | + | chr8_1:78637155-78637174 | Msa1216710:CDS | 45.0% | |
| TAGGGAGAAGATGTAGTTGC+TGG | + | chr8_1:78637469-78637488 | Msa1216710:intron | 45.0% | |
| !! | CTCATGGTCTCTAGAACTTC+AGG | - | chr8_1:78637505-78637524 | None:intergenic | 45.0% |
| ATCTGGCATGCAAGTTCTCA+TGG | - | chr8_1:78637521-78637540 | None:intergenic | 45.0% | |
| ! | TGTCGAATTGGAAAGCGTAC+TGG | + | chr8_1:78637742-78637761 | Msa1216710:CDS | 45.0% |
| AGCTACAGACATGGTCAATG+AGG | + | chr8_1:78637783-78637802 | Msa1216710:CDS | 45.0% | |
| GCTACAGACATGGTCAATGA+GGG | + | chr8_1:78637784-78637803 | Msa1216710:CDS | 45.0% | |
| CTACAGACATGGTCAATGAG+GGG | + | chr8_1:78637785-78637804 | Msa1216710:CDS | 45.0% | |
| AAGAACAAAGTGGTTGCCAC+TGG | + | chr8_1:78638234-78638253 | Msa1216710:CDS | 45.0% | |
| CCAAACACACCCTAAGACAT+TGG | - | chr8_1:78638417-78638436 | None:intergenic | 45.0% | |
| CCAATGTCTTAGGGTGTGTT+TGG | + | chr8_1:78638414-78638433 | Msa1216710:intron | 45.0% | |
| TTAGGGTGTGTTTGGGAAGA+GGG | + | chr8_1:78638422-78638441 | Msa1216710:intron | 45.0% | |
| GTTTGGGAAGAGGGTTTAGT+AGG | + | chr8_1:78638431-78638450 | Msa1216710:intron | 45.0% | |
| TTGGGAAGAGGGTTTAGTAG+GGG | + | chr8_1:78638433-78638452 | Msa1216710:intron | 45.0% | |
| AAGAGGGTTTAGTAGGGGAA+GGG | + | chr8_1:78638438-78638457 | Msa1216710:intron | 45.0% | |
| AAAAGGGTTTAGGAGGGGAA+GGG | - | chr8_1:78638635-78638654 | None:intergenic | 45.0% | |
| TTGGGAAAAGGGTTTAGGAG+GGG | - | chr8_1:78638640-78638659 | None:intergenic | 45.0% | |
| GTTTGGGAAAAGGGTTTAGG+AGG | - | chr8_1:78638642-78638661 | None:intergenic | 45.0% | |
| AGACAAGTCCAGAGGACATT+GGG | + | chr8_1:78638855-78638874 | Msa1216710:CDS | 45.0% | |
| AAAGCAAGCACTTTCTCCTC+CGG | + | chr8_1:78639180-78639199 | Msa1216710:CDS | 45.0% | |
| TCCAAATCCTCGCTTAATGC+CGG | - | chr8_1:78639202-78639221 | None:intergenic | 45.0% | |
| GCTAGAAGAAATGGTGCACA+AGG | + | chr8_1:78639399-78639418 | Msa1216710:CDS | 45.0% | |
| CACAAGGAATTGGACTTTGC+AGG | + | chr8_1:78639415-78639434 | Msa1216710:CDS | 45.0% | |
| ACTTTGCAGGACTGAACACA+TGG | + | chr8_1:78639428-78639447 | Msa1216710:CDS | 45.0% | |
| AAAGGCTAAAGGCTGTGAGA+AGG | + | chr8_1:78639634-78639653 | Msa1216710:CDS | 45.0% | |
| GGCTGTGAGAAGGATGATAA+TGG | + | chr8_1:78639644-78639663 | Msa1216710:CDS | 45.0% | |
| ! | TGAGGGAATTTTCCGTGCAA+TGG | + | chr8_1:78639731-78639750 | Msa1216710:CDS | 45.0% |
| ! | GGAATTTTCCGTGCAATGGA+TGG | + | chr8_1:78639735-78639754 | Msa1216710:CDS | 45.0% |
| ACAATCGGATTGTTACTGGG+AGG | - | chr8_1:78639761-78639780 | None:intergenic | 45.0% | |
| ! | AGTGAACTGACTTCTCAGAC+AGG | + | chr8_1:78639834-78639853 | Msa1216710:CDS | 45.0% |
| ! | TCTGAGGTTAATCCCATGCT+TGG | + | chr8_1:78639897-78639916 | Msa1216710:CDS | 45.0% |
| !! | AATCCCATGCTTGGTTTTCG+CGG | + | chr8_1:78639906-78639925 | Msa1216710:CDS | 45.0% |
| GCAAGCATCATATTAAGCGG+AGG | - | chr8_1:78639944-78639963 | None:intergenic | 45.0% | |
| TCCAGAATTGACTGAGATGC+AGG | + | chr8_1:78640107-78640126 | Msa1216710:CDS | 45.0% | |
| ATTGCGACTCACTGAAACAG+CGG | - | chr8_1:78640151-78640170 | None:intergenic | 45.0% | |
| TCCACTTATTGGTACACCAC+AGG | + | chr8_1:78640200-78640219 | Msa1216710:intron | 45.0% | |
| GGCTACAGTAGAGATGATGT+TGG | + | chr8_1:78640739-78640758 | Msa1216710:CDS | 45.0% | |
| CTTCCTTCATACCTTTCTGC+TGG | + | chr8_1:78640769-78640788 | Msa1216710:CDS | 45.0% | |
| ! | ATCCCAGCAGAAAGGTATGA+AGG | - | chr8_1:78640775-78640794 | None:intergenic | 45.0% |
| GTTGTGTGGTGTGTGATTTC+TGG | + | chr8_1:78640829-78640848 | Msa1216710:intron | 45.0% | |
| GTTTGAATAGAGAGTCGCGT+GGG | - | chr8_1:78640890-78640909 | None:intergenic | 45.0% | |
| AGTTTGAATAGAGAGTCGCG+TGG | - | chr8_1:78640891-78640910 | None:intergenic | 45.0% | |
| ! | GTACTTGACCAGAAAGGTGT+GGG | + | chr8_1:78641077-78641096 | Msa1216710:CDS | 45.0% |
| TTAGTTGACCCACACCTTTC+TGG | - | chr8_1:78641088-78641107 | None:intergenic | 45.0% | |
| GATTCCAATTGCTAGGCTTG+CGG | + | chr8_1:78641439-78641458 | Msa1216710:CDS | 45.0% | |
| TTAGACTGCTTCCTGTCTTG+TGG | + | chr8_1:78641492-78641511 | Msa1216710:three_prime_UTR | 45.0% | |
| GGGAGCAAACTTGGCAGAAA+TGG | + | chr8_1:78635369-78635388 | Msa1216710:CDS | 50.0% | |
| CCTCCCACAAACCATTTGGT+AGG | - | chr8_1:78635474-78635493 | None:intergenic | 50.0% | |
| ! | CCTACCAAATGGTTTGTGGG+AGG | + | chr8_1:78635471-78635490 | Msa1216710:CDS | 50.0% |
| TGTGTCCATCATTCCAGGCA+TGG | - | chr8_1:78636557-78636576 | None:intergenic | 50.0% | |
| TGATGAAGTGGTTGCTGGGT+TGG | + | chr8_1:78636597-78636616 | Msa1216710:CDS | 50.0% | |
| !! | GCTGGGTTGGCTTCAAAAAG+TGG | + | chr8_1:78636610-78636629 | Msa1216710:CDS | 50.0% |
| TCCTTGTGCATGCCATTCCT+CGG | - | chr8_1:78638316-78638335 | None:intergenic | 50.0% | |
| CTTAGGGTGTGTTTGGGAAG+AGG | + | chr8_1:78638421-78638440 | Msa1216710:intron | 50.0% | |
| GAAGAGGGTTTAGTAGGGGA+AGG | + | chr8_1:78638437-78638456 | Msa1216710:intron | 50.0% | |
| GAAAAGGGTTTAGGAGGGGA+AGG | - | chr8_1:78638636-78638655 | None:intergenic | 50.0% | |
| AAGGACAGAGACAAGTCCAG+AGG | + | chr8_1:78638847-78638866 | Msa1216710:CDS | 50.0% | |
| GAGACAAGTCCAGAGGACAT+TGG | + | chr8_1:78638854-78638873 | Msa1216710:CDS | 50.0% | |
| GACAAGTCCAGAGGACATTG+GGG | + | chr8_1:78638856-78638875 | Msa1216710:CDS | 50.0% | |
| ACAAGTCCAGAGGACATTGG+GGG | + | chr8_1:78638857-78638876 | Msa1216710:CDS | 50.0% | |
| GTTGGCATCTTGACAGCTAG+AGG | + | chr8_1:78638893-78638912 | Msa1216710:CDS | 50.0% | |
| TGCTGTTGTAGCTCGTGGAT+GGG | + | chr8_1:78638934-78638953 | Msa1216710:CDS | 50.0% | |
| !! | TGGGGAAAGTGTTGTGTGTC+TGG | + | chr8_1:78638953-78638972 | Msa1216710:CDS | 50.0% |
| GGAGAATGGATCTCGCTGAA+TGG | + | chr8_1:78639133-78639152 | Msa1216710:CDS | 50.0% | |
| ATCTCGCTGAATGGATCCAC+AGG | + | chr8_1:78639142-78639161 | Msa1216710:CDS | 50.0% | |
| AAATCCTCGCTTAATGCCGG+AGG | - | chr8_1:78639199-78639218 | None:intergenic | 50.0% | |
| TCCGGCATTAAGCGAGGATT+TGG | + | chr8_1:78639198-78639217 | Msa1216710:CDS | 50.0% | |
| TGGCCATTACGCAAGAACAG+AGG | + | chr8_1:78639664-78639683 | Msa1216710:CDS | 50.0% | |
| ACATGTGCCAAGTCACCTTC+AGG | - | chr8_1:78639810-78639829 | None:intergenic | 50.0% | |
| GCCTGCATCTCAGTCAATTC+TGG | - | chr8_1:78640111-78640130 | None:intergenic | 50.0% | |
| ! | GCTGTTTCAGTGAGTCGCAA+TGG | + | chr8_1:78640150-78640169 | Msa1216710:CDS | 50.0% |
| GCCTGTGGTGTACCAATAAG+TGG | - | chr8_1:78640204-78640223 | None:intergenic | 50.0% | |
| TCAGCAACTAGTGCAGCTCT+TGG | - | chr8_1:78640521-78640540 | None:intergenic | 50.0% | |
| AGCTGCACTAGTTGCTGATG+AGG | + | chr8_1:78640523-78640542 | Msa1216710:CDS | 50.0% | |
| GCTGCAAAATCCCAGCAGAA+AGG | - | chr8_1:78640783-78640802 | None:intergenic | 50.0% | |
| TTTGCAGCATGACCCATTCG+AGG | + | chr8_1:78640795-78640814 | Msa1216710:CDS | 50.0% | |
| GGTACTTGACCAGAAAGGTG+TGG | + | chr8_1:78641076-78641095 | Msa1216710:intron | 50.0% | |
| GTTGGAATATGCGGAGAGCA+CGG | + | chr8_1:78641263-78641282 | Msa1216710:CDS | 50.0% | |
| CGGGTGTTCACCTTTGGCAA+AGG | + | chr8_1:78635118-78635137 | Msa1216710:five_prime_UTR | 55.0% | |
| GGGAGGAAAGGGAGCAAACT+TGG | + | chr8_1:78635360-78635379 | Msa1216710:CDS | 55.0% | |
| GAGCGAACAGAGACAAGGAG+AGG | - | chr8_1:78635562-78635581 | None:intergenic | 55.0% | |
| CTCCTTGTCTCTGTTCGCTC+TGG | + | chr8_1:78635562-78635581 | Msa1216710:intron | 55.0% | |
| CACCAGAGCGAACAGAGACA+AGG | - | chr8_1:78635567-78635586 | None:intergenic | 55.0% | |
| TAGACACAGAAGAGGGGCGA+GGG | - | chr8_1:78636165-78636184 | None:intergenic | 55.0% | |
| ATAGACACAGAAGAGGGGCG+AGG | - | chr8_1:78636166-78636185 | None:intergenic | 55.0% | |
| GTTCACTGCTGAAGATGCCG+AGG | + | chr8_1:78638296-78638315 | Msa1216710:CDS | 55.0% | |
| CTGCTGAAGATGCCGAGGAA+TGG | + | chr8_1:78638301-78638320 | Msa1216710:CDS | 55.0% | |
| AGGGTTTAGTAGGGGAAGGG+AGG | + | chr8_1:78638441-78638460 | Msa1216710:intron | 55.0% | |
| GGGTTTAGTAGGGGAAGGGA+GGG | + | chr8_1:78638442-78638461 | Msa1216710:intron | 55.0% | |
| GGTTTAGTAGGGGAAGGGAG+GGG | + | chr8_1:78638443-78638462 | Msa1216710:intron | 55.0% | |
| GGCATCTTGACAGCTAGAGG+TGG | + | chr8_1:78638896-78638915 | Msa1216710:CDS | 55.0% | |
| CATGCTGCTGTTGTAGCTCG+TGG | + | chr8_1:78638929-78638948 | Msa1216710:CDS | 55.0% | |
| CTGCTGTTGTAGCTCGTGGA+TGG | + | chr8_1:78638933-78638952 | Msa1216710:CDS | 55.0% | |
| GCTGTTGTAGCTCGTGGATG+GGG | + | chr8_1:78638935-78638954 | Msa1216710:CDS | 55.0% | |
| TCCACAGGCGAGGTGATTCT+AGG | + | chr8_1:78639157-78639176 | Msa1216710:CDS | 55.0% | |
| TCCTAGAATCACCTCGCCTG+TGG | - | chr8_1:78639161-78639180 | None:intergenic | 55.0% | |
| TTCTCCTCCGGCATTAAGCG+AGG | + | chr8_1:78639192-78639211 | Msa1216710:CDS | 55.0% | |
| CAGCCGCGAAAACCAAGCAT+GGG | - | chr8_1:78639912-78639931 | None:intergenic | 55.0% | |
| GACTCACTGAAACAGCGGCT+TGG | - | chr8_1:78640146-78640165 | None:intergenic | 55.0% | |
| ! | GCAGCTCAAGTTGCAGTGTG+AGG | + | chr8_1:78641461-78641480 | Msa1216710:CDS | 55.0% |
| CTGCTTCCTGTCTTGTGGCA+TGG | + | chr8_1:78641497-78641516 | Msa1216710:three_prime_UTR | 55.0% | |
| AGAGAGCCATGCCACAAGAC+AGG | - | chr8_1:78641506-78641525 | None:intergenic | 55.0% | |
| ! | CTCTGTTCGCTCTGGTGCTG+CGG | + | chr8_1:78635570-78635589 | Msa1216710:intron | 60.0% |
| AGACACAGAAGAGGGGCGAG+GGG | - | chr8_1:78636164-78636183 | None:intergenic | 60.0% | |
| AGGGGATGCAGGCAAACCAG+TGG | - | chr8_1:78638253-78638272 | None:intergenic | 60.0% | |
| !! | ACTGGTTTGCCTGCATCCCC+TGG | + | chr8_1:78638252-78638271 | Msa1216710:CDS | 60.0% |
| GCCGAGGAATGGCATGCACA+AGG | + | chr8_1:78638312-78638331 | Msa1216710:CDS | 60.0% | |
| TTAGTAGGGGAAGGGAGGGG+AGG | + | chr8_1:78638446-78638465 | Msa1216710:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr8_1:78638630-78638649 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr8_1:78638631-78638650 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr8_1:78638632-78638651 | None:intergenic | 60.0% | |
| TGCATGCCCCCAATGTCCTC+TGG | - | chr8_1:78638866-78638885 | None:intergenic | 60.0% | |
| ! | GGGGGCATGCATTCAGCTGT+TGG | + | chr8_1:78638875-78638894 | Msa1216710:CDS | 60.0% |
| GCTGAATGGATCCACAGGCG+AGG | + | chr8_1:78639147-78639166 | Msa1216710:CDS | 60.0% | |
| CTGGGAGGCCATCCATTGCA+CGG | - | chr8_1:78639746-78639765 | None:intergenic | 60.0% | |
| GCAGCCGCGAAAACCAAGCA+TGG | - | chr8_1:78639913-78639932 | None:intergenic | 60.0% | |
| !! | TGCTTGGTTTTCGCGGCTGC+AGG | + | chr8_1:78639913-78639932 | Msa1216710:CDS | 60.0% |
| ! | GGAATATGCGGAGAGCACGG+TGG | + | chr8_1:78641266-78641285 | Msa1216710:CDS | 60.0% |
| GCTGCCGCAAGCCTAGCAAT+TGG | - | chr8_1:78641446-78641465 | None:intergenic | 60.0% | |
| CATCCCCTGGAGCTGCGGTT+GGG | + | chr8_1:78638265-78638284 | Msa1216710:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr8_1:78638626-78638645 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr8_1:78638627-78638646 | None:intergenic | 65.0% | |
| ACAGAAGAGGGGCGAGGGGC+GGG | - | chr8_1:78636160-78636179 | None:intergenic | 70.0% | |
| CACAGAAGAGGGGCGAGGGG+CGG | - | chr8_1:78636161-78636180 | None:intergenic | 70.0% | |
| GCCTGCATCCCCTGGAGCTG+CGG | + | chr8_1:78638260-78638279 | Msa1216710:CDS | 70.0% | |
| ACCGCAGCTCCAGGGGATGC+AGG | - | chr8_1:78638264-78638283 | None:intergenic | 70.0% | |
| GCATCCCCTGGAGCTGCGGT+TGG | + | chr8_1:78638264-78638283 | Msa1216710:CDS | 70.0% | |
| CTGCCCAACCGCAGCTCCAG+GGG | - | chr8_1:78638271-78638290 | None:intergenic | 70.0% | |
| CCTGCCCAACCGCAGCTCCA+GGG | - | chr8_1:78638272-78638291 | None:intergenic | 70.0% | |
| ACCTGCCCAACCGCAGCTCC+AGG | - | chr8_1:78638273-78638292 | None:intergenic | 70.0% | |
| AGAAGAGGGGCGAGGGGCGG+GGG | - | chr8_1:78636158-78636177 | None:intergenic | 75.0% | |
| CAGAAGAGGGGCGAGGGGCG+GGG | - | chr8_1:78636159-78636178 | None:intergenic | 75.0% | |
| CCCTGGAGCTGCGGTTGGGC+AGG | + | chr8_1:78638269-78638288 | Msa1216710:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 78635113 | 78641638 | 78635113 | ID=Msa1216710;Name=Msa1216710 |
| chr8_1 | mRNA | 78635113 | 78641638 | 78635113 | ID=Msa1216710-mRNA-1;Parent=Msa1216710;Name=Msa1216710-mRNA-1;_AED=0.09;_eAED=0.09;_QI=50|0.82|0.83|1|1|1|18|157|844 |
| chr8_1 | exon | 78635113 | 78635174 | 78635113 | ID=Msa1216710-mRNA-1:exon:27195;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78635358 | 78635573 | 78635358 | ID=Msa1216710-mRNA-1:exon:27196;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78636550 | 78636687 | 78636550 | ID=Msa1216710-mRNA-1:exon:27197;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78636856 | 78637018 | 78636856 | ID=Msa1216710-mRNA-1:exon:27198;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78637115 | 78637350 | 78637115 | ID=Msa1216710-mRNA-1:exon:27199;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78637472 | 78637600 | 78637472 | ID=Msa1216710-mRNA-1:exon:27200;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78637697 | 78637876 | 78637697 | ID=Msa1216710-mRNA-1:exon:27201;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78638213 | 78638350 | 78638213 | ID=Msa1216710-mRNA-1:exon:27202;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78638845 | 78639009 | 78638845 | ID=Msa1216710-mRNA-1:exon:27203;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78639097 | 78639261 | 78639097 | ID=Msa1216710-mRNA-1:exon:27204;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78639360 | 78639449 | 78639360 | ID=Msa1216710-mRNA-1:exon:27205;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78639618 | 78639934 | 78639618 | ID=Msa1216710-mRNA-1:exon:27206;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78640092 | 78640197 | 78640092 | ID=Msa1216710-mRNA-1:exon:27207;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78640416 | 78640544 | 78640416 | ID=Msa1216710-mRNA-1:exon:27208;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78640679 | 78640816 | 78640679 | ID=Msa1216710-mRNA-1:exon:27209;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78641077 | 78641154 | 78641077 | ID=Msa1216710-mRNA-1:exon:27210;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78641263 | 78641354 | 78641263 | ID=Msa1216710-mRNA-1:exon:27211;Parent=Msa1216710-mRNA-1 |
| chr8_1 | exon | 78641439 | 78641638 | 78641439 | ID=Msa1216710-mRNA-1:exon:27212;Parent=Msa1216710-mRNA-1 |
| chr8_1 | five_prime_UTR | 78635113 | 78635162 | 78635113 | ID=Msa1216710-mRNA-1:five_prime_utr;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78635163 | 78635174 | 78635163 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78635358 | 78635573 | 78635358 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78636550 | 78636687 | 78636550 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78636856 | 78637018 | 78636856 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78637115 | 78637350 | 78637115 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78637472 | 78637600 | 78637472 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78637697 | 78637876 | 78637697 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78638213 | 78638350 | 78638213 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78638845 | 78639009 | 78638845 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78639097 | 78639261 | 78639097 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78639360 | 78639449 | 78639360 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78639618 | 78639934 | 78639618 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78640092 | 78640197 | 78640092 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78640416 | 78640544 | 78640416 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78640679 | 78640816 | 78640679 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78641077 | 78641154 | 78641077 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78641263 | 78641354 | 78641263 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | CDS | 78641439 | 78641481 | 78641439 | ID=Msa1216710-mRNA-1:cds;Parent=Msa1216710-mRNA-1 |
| chr8_1 | three_prime_UTR | 78641482 | 78641638 | 78641482 | ID=Msa1216710-mRNA-1:three_prime_utr;Parent=Msa1216710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
