Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329610 | sp|Q42736|PPDK_FLAPR | 82.030 | 857 | 140 | 2 | 1 | 843 | 100 | 956 | 0.0 | 1473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329610 | A0A1S2YQH1 | 90.665 | 857 | 66 | 2 | 1 | 843 | 95 | 951 | 0.0 | 1609 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1216710 | Msa1329610 | 0.825556 | 4.396048e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329610 | MtrunA17_Chr4g0066381 | 90.855 | 842 | 68 | 2 | 1 | 833 | 92 | 933 | 0.0 | 1594 |
| Msa1329610 | MtrunA17_Chr4g0066391 | 95.811 | 549 | 17 | 1 | 1 | 543 | 28 | 576 | 0.0 | 1092 |
| Msa1329610 | MtrunA17_Chr4g0066401 | 94.237 | 295 | 9 | 1 | 557 | 843 | 1 | 295 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329610 | AT4G15530.1 | 79.230 | 857 | 163 | 3 | 1 | 843 | 100 | 955 | 0.0 | 1434 |
| Msa1329610 | AT4G15530.4 | 79.230 | 857 | 163 | 3 | 1 | 843 | 100 | 955 | 0.0 | 1434 |
| Msa1329610 | AT4G15530.6 | 79.230 | 857 | 163 | 3 | 1 | 843 | 107 | 962 | 0.0 | 1433 |
| Msa1329610 | AT4G15530.5 | 79.230 | 857 | 163 | 3 | 1 | 843 | 107 | 962 | 0.0 | 1433 |
| Msa1329610 | AT4G15530.7 | 79.230 | 857 | 163 | 3 | 1 | 843 | 1 | 856 | 0.0 | 1432 |
| Msa1329610 | AT4G15530.3 | 79.230 | 857 | 163 | 3 | 1 | 843 | 1 | 856 | 0.0 | 1432 |
| Msa1329610 | AT4G15530.2 | 79.230 | 857 | 163 | 3 | 1 | 843 | 19 | 874 | 0.0 | 1431 |
Find 208 sgRNAs with CRISPR-Local
Find 421 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATGGTGTTTGGTAATA+TGG | 0.097141 | 8_4:+48308978 | Msa1329610:CDS |
| GCAAAATAATTGTGGTTTAT+TGG | 0.168159 | 8_4:+48313283 | Msa1329610:three_prime_UTR |
| GCTAATTCTAGTTGCTTCTT+TGG | 0.182850 | 8_4:-48308856 | None:intergenic |
| TTAGTTGACCCACACCTTTC+TGG | 0.196958 | 8_4:-48312836 | None:intergenic |
| ACAAGGAAAGAGTGCAATTT+TGG | 0.237894 | 8_4:+48310068 | Msa1329610:CDS |
| TGATGATAGGTGGTTGTAAT+TGG | 0.242997 | 8_4:+48310827 | Msa1329610:intron |
| TGTTAAGTTACCTTCAAATT+TGG | 0.245919 | 8_4:-48312894 | None:intergenic |
| CGAAACATTAATCAGATAAC+TGG | 0.274659 | 8_4:+48308928 | Msa1329610:CDS |
| ACTTTGTTCTTGTACTTAGA+TGG | 0.277004 | 8_4:-48309961 | None:intergenic |
| ACTGGTGAAAAGAAACTTTA+TGG | 0.279457 | 8_4:+48309045 | Msa1329610:CDS |
| GACATCAAGTGAGTTTAATA+AGG | 0.284688 | 8_4:+48312189 | Msa1329610:CDS |
| GGTGGTTGTAATTGGGGATA+TGG | 0.285414 | 8_4:+48310835 | Msa1329610:intron |
| CTAGCTGTTATTGCATCTTC+AGG | 0.294021 | 8_4:-48311117 | None:intergenic |
| TCTAATAATCGGATTGTTAC+TGG | 0.295719 | 8_4:-48311526 | None:intergenic |
| TAATCAGATAACTGGGCTAA+TGG | 0.301146 | 8_4:+48308936 | Msa1329610:CDS |
| TCCGGCATTAAGCGAGGATT+TGG | 0.306858 | 8_4:+48310934 | Msa1329610:CDS |
| AGACTCGTTTACTTCAATAT+TGG | 0.307162 | 8_4:-48310720 | None:intergenic |
| TACTGTAGCCAAATGTCATT+TGG | 0.311417 | 8_4:-48312499 | None:intergenic |
| GCCTGCATCTCAGTCAATTC+TGG | 0.316425 | 8_4:-48311873 | None:intergenic |
| TTGCATGCCAGATGCTTATA+AGG | 0.318819 | 8_4:+48309267 | Msa1329610:CDS |
| ATGTCTCGTGTTCTCCGTTC+AGG | 0.319494 | 8_4:+48313084 | Msa1329610:CDS |
| CTTCCTTCATACCTTTCTGC+TGG | 0.323308 | 8_4:+48312542 | Msa1329610:CDS |
| ATGGACACAGTTCTTAATCT+TGG | 0.333394 | 8_4:+48308307 | Msa1329610:CDS |
| TGCTGTGAATATTCAATCTA+TGG | 0.335352 | 8_4:+48308963 | Msa1329610:CDS |
| GGTAATATGGGAAATACTTC+AGG | 0.336156 | 8_4:+48308991 | Msa1329610:CDS |
| GGGAGCAAACTTGGCAGAAA+TGG | 0.342906 | 8_4:+48307111 | Msa1329610:CDS |
| CACAAGGAATTGGACTTTGC+AGG | 0.346976 | 8_4:+48311151 | Msa1329610:CDS |
| CTCATGGTCTCTAGAACTTC+AGG | 0.349864 | 8_4:-48309241 | None:intergenic |
| TGTCTTGGGCTGATCAAATA+AGG | 0.349941 | 8_4:+48310966 | Msa1329610:CDS |
| ACTGGTTTGCCTGCATCCCC+TGG | 0.352559 | 8_4:+48309991 | Msa1329610:CDS |
| GGGTTCTTCTCTAAGCTATA+AGG | 0.352742 | 8_4:+48312241 | Msa1329610:CDS |
| AGACGTTTCTTAGACATGTT+TGG | 0.353523 | 8_4:+48308397 | Msa1329610:CDS |
| TGGGGAAAGTGTTGTGTGTC+TGG | 0.364893 | 8_4:+48310692 | Msa1329610:CDS |
| ATTTGGAAACTTTCATGTCT+TGG | 0.365782 | 8_4:+48310951 | Msa1329610:CDS |
| AGAAATGGTGCACAAGGAAT+TGG | 0.365998 | 8_4:+48311141 | Msa1329610:CDS |
| TTTGGAAACTTTCATGTCTT+GGG | 0.370890 | 8_4:+48310952 | Msa1329610:CDS |
| AGACAAGTCCAGAGGACATT+GGG | 0.372968 | 8_4:+48310594 | Msa1329610:CDS |
| GCATCCCCTGGAGCTGCGGT+TGG | 0.374079 | 8_4:+48310003 | Msa1329610:CDS |
| TCAAAATCTGATTGTTGATA+AGG | 0.379114 | 8_4:-48311475 | None:intergenic |
| TGTAGTTCTACCAGAGATAA+TGG | 0.383769 | 8_4:+48311941 | Msa1329610:CDS |
| TTATTGGAGAAAACATTGTT+TGG | 0.386507 | 8_4:+48313299 | Msa1329610:three_prime_UTR |
| GACCTTACCCAAATGACATT+TGG | 0.388729 | 8_4:+48312491 | Msa1329610:CDS |
| GATGATAGGTGGTTGTAATT+GGG | 0.390892 | 8_4:+48310828 | Msa1329610:intron |
| TAACAGCGGGTGTTCACCTT+TGG | 0.392290 | 8_4:+48306854 | None:intergenic |
| TGTCATTTGGGTAAGGTCAT+TGG | 0.393525 | 8_4:-48312486 | None:intergenic |
| AAGATGTAGTTGCTGGAATC+AGG | 0.402459 | 8_4:+48309215 | Msa1329610:CDS |
| TTGGCAGAAATGGCAACAAT+TGG | 0.404140 | 8_4:+48307121 | Msa1329610:CDS |
| TTTCCTTTGTTCTTGCGTAA+TGG | 0.410992 | 8_4:-48311431 | None:intergenic |
| TTGATATTCTCGACATGCTT+CGG | 0.411636 | 8_4:-48307176 | None:intergenic |
| GCAATAACAGCTAGAAGAAA+TGG | 0.412787 | 8_4:+48311126 | Msa1329610:CDS |
| ACATGTGCCAAGTCACCTTC+AGG | 0.414462 | 8_4:-48311571 | None:intergenic |
| AATCAGATAACTGGGCTAAT+GGG | 0.414551 | 8_4:+48308937 | Msa1329610:CDS |
| ACCTGCCCAACCGCAGCTCC+AGG | 0.415042 | 8_4:-48310009 | None:intergenic |
| ATTGCATTCTTTGCTCAACT+TGG | 0.423442 | 8_4:+48313053 | Msa1329610:CDS |
| CATCCCCTGGAGCTGCGGTT+GGG | 0.424425 | 8_4:+48310004 | Msa1329610:CDS |
| TTCCTTCATACCTTTCTGCT+GGG | 0.426273 | 8_4:+48312543 | Msa1329610:CDS |
| TTTCGATACTTAATAGCCCT+TGG | 0.429413 | 8_4:-48308910 | None:intergenic |
| TTGAATGATGAAGTGGTTGC+TGG | 0.429675 | 8_4:+48308331 | Msa1329610:CDS |
| AATCAAAATGTGCACAGAAA+AGG | 0.430403 | 8_4:+48312857 | Msa1329610:CDS |
| ATCTCCTCCCACAAACCATT+TGG | 0.430655 | 8_4:-48307217 | None:intergenic |
| TCCTTGTGCATGCCATTCCT+CGG | 0.432091 | 8_4:-48310052 | None:intergenic |
| TCCACAGGCGAGGTGATTCT+AGG | 0.432668 | 8_4:+48310893 | Msa1329610:CDS |
| TACTGCTAAACCAAATTTGA+AGG | 0.436038 | 8_4:+48312884 | Msa1329610:CDS |
| TCTATGGTGTTTGGTAATAT+GGG | 0.436697 | 8_4:+48308979 | Msa1329610:CDS |
| TAGGGAGAAGATGTAGTTGC+TGG | 0.436970 | 8_4:+48309208 | Msa1329610:intron |
| GATTTCCATGCCTGGAATGA+TGG | 0.438634 | 8_4:+48308288 | Msa1329610:intron |
| GGGAGGAAAGGGAGCAAACT+TGG | 0.438786 | 8_4:+48307102 | Msa1329610:CDS |
| ATCAAAATGTGCACAGAAAA+GGG | 0.440025 | 8_4:+48312858 | Msa1329610:CDS |
| TCAAGTTCCTTATAAGCATC+TGG | 0.440088 | 8_4:-48309274 | None:intergenic |
| ATGGGAAATACTTCAGGAAC+TGG | 0.442975 | 8_4:+48308997 | Msa1329610:CDS |
| ACCGCAGCTCCAGGGGATGC+AGG | 0.446945 | 8_4:-48310000 | None:intergenic |
| TTATGTGTAGTTGGGAGGAA+AGG | 0.450313 | 8_4:+48307090 | Msa1329610:intron |
| TGCTTCAGATGAAAGGCTAA+AGG | 0.456051 | 8_4:+48311387 | Msa1329610:CDS |
| TGATGAAGTGGTTGCTGGGT+TGG | 0.459454 | 8_4:+48308336 | Msa1329610:CDS |
| GGCTGTGAGAAGGATGATAA+TGG | 0.461097 | 8_4:+48311408 | Msa1329610:CDS |
| CTTCATGAATTTCTTCCTGA+AGG | 0.463137 | 8_4:+48311556 | Msa1329610:CDS |
| GAATGTCTATGTTGAAGCTA+AGG | 0.464580 | 8_4:+48308717 | Msa1329610:CDS |
| AATATTCAATCTATGGTGTT+TGG | 0.464716 | 8_4:+48308970 | Msa1329610:CDS |
| ACTGTAGCCAAATGTCATTT+GGG | 0.469166 | 8_4:-48312498 | None:intergenic |
| CTGCTGTTGTAGCTCGTGGA+TGG | 0.470770 | 8_4:+48310672 | Msa1329610:CDS |
| TCTGAGGTTAATCCCATGCT+TGG | 0.472369 | 8_4:+48311661 | Msa1329610:CDS |
| TGCTGTTGTAGCTCGTGGAT+GGG | 0.472949 | 8_4:+48310673 | Msa1329610:CDS |
| ATTTCTTCCTGAAGGTGACT+TGG | 0.473967 | 8_4:+48311564 | Msa1329610:CDS |
| ATCTATCAGATTTCCATGCC+TGG | 0.475192 | 8_4:+48308280 | Msa1329610:intron |
| TTAGACTGCTTCCTGTCTTG+TGG | 0.475560 | 8_4:+48313243 | Msa1329610:three_prime_UTR |
| TGGATGTTGCAATGTCGAAT+TGG | 0.477597 | 8_4:+48309469 | Msa1329610:CDS |
| AGAACTGTGTCCATCATTCC+AGG | 0.483639 | 8_4:-48308298 | None:intergenic |
| TCCAGAATTGACTGAGATGC+AGG | 0.485250 | 8_4:+48311872 | Msa1329610:CDS |
| ATTGGAAAGCGTACTGGTAA+AGG | 0.485922 | 8_4:+48309487 | Msa1329610:CDS |
| TCCAAATCCTCGCTTAATGC+CGG | 0.488847 | 8_4:-48310935 | None:intergenic |
| ATCTGGCATGCAAGTTCTCA+TGG | 0.489479 | 8_4:-48309257 | None:intergenic |
| TATGTGTAGTTGGGAGGAAA+GGG | 0.490148 | 8_4:+48307091 | Msa1329610:intron |
| TTGTGGGAGGAGATACTTGA+AGG | 0.490236 | 8_4:+48307226 | Msa1329610:CDS |
| GCTGCCGCAAGCCTAGCAAT+TGG | 0.491619 | 8_4:-48313194 | None:intergenic |
| TATTCCACACTCATTGTTTG+AGG | 0.493180 | 8_4:+48308603 | Msa1329610:CDS |
| GAAGTGGAGGATCTAATAAT+CGG | 0.493733 | 8_4:-48311537 | None:intergenic |
| GAAAAGCTAAAGCAATCAAA+AGG | 0.493897 | 8_4:+48308634 | Msa1329610:CDS |
| CTGCTTCCTGTCTTGTGGCA+TGG | 0.497061 | 8_4:+48313248 | Msa1329610:three_prime_UTR |
| ATTGGATTATCTGTGCCTCC+TGG | 0.497182 | 8_4:+48307139 | Msa1329610:CDS |
| TCAACTCTTGGGATAGTCCA+AGG | 0.500415 | 8_4:+48308893 | Msa1329610:CDS |
| CTGCCCAACCGCAGCTCCAG+GGG | 0.505966 | 8_4:-48310007 | None:intergenic |
| TCAGCAACTAGTGCAGCTCT+TGG | 0.509292 | 8_4:-48312284 | None:intergenic |
| AAAGCAAGCACTTTCTCCTC+CGG | 0.510730 | 8_4:+48310916 | Msa1329610:CDS |
| TGGTAATATCAGAAGGAGAA+TGG | 0.511559 | 8_4:+48310855 | Msa1329610:CDS |
| TGTCGAATTGGAAAGCGTAC+TGG | 0.513357 | 8_4:+48309481 | Msa1329610:CDS |
| TTTGCAGGATTCCAATTGCT+AGG | 0.514085 | 8_4:+48313183 | Msa1329610:intron |
| GCCTGCATCCCCTGGAGCTG+CGG | 0.515502 | 8_4:+48309999 | Msa1329610:CDS |
| AGAGTTTCTCACTAATGCTC+AGG | 0.517854 | 8_4:+48309068 | Msa1329610:CDS |
| ACAAGTGGAACCATTATCTC+TGG | 0.520897 | 8_4:-48311951 | None:intergenic |
| TGAATGATGAAGTGGTTGCT+GGG | 0.521032 | 8_4:+48308332 | Msa1329610:CDS |
| TGAGAAAGTGTTCTGTGAGA+TGG | 0.521216 | 8_4:+48312220 | Msa1329610:CDS |
| CCTGCCCAACCGCAGCTCCA+GGG | 0.522388 | 8_4:-48310008 | None:intergenic |
| AAACAAAGCAATGAAGTCCT+TGG | 0.522922 | 8_4:+48306895 | Msa1329610:exon |
| AGAACCTACCAAATGGTTTG+TGG | 0.525495 | 8_4:+48307209 | Msa1329610:CDS |
| ATCTCGCTGAATGGATCCAC+AGG | 0.525927 | 8_4:+48310878 | Msa1329610:CDS |
| CTACAGCTGCAAAATAATTG+TGG | 0.527223 | 8_4:+48313275 | Msa1329610:three_prime_UTR |
| TGAAGTAAACGAGTCTAGAA+AGG | 0.527639 | 8_4:+48310727 | Msa1329610:CDS |
| CTATGCAACTAACCTCGAAT+GGG | 0.528808 | 8_4:-48312580 | None:intergenic |
| GAACCTACCAAATGGTTTGT+GGG | 0.530784 | 8_4:+48307210 | Msa1329610:CDS |
| GGAGAATGGATCTCGCTGAA+TGG | 0.532856 | 8_4:+48310869 | Msa1329610:CDS |
| AGAGAGCCATGCCACAAGAC+AGG | 0.533063 | 8_4:-48313254 | None:intergenic |
| ATCCCAGCAGAAAGGTATGA+AGG | 0.533887 | 8_4:-48312545 | None:intergenic |
| ACTATGCAACTAACCTCGAA+TGG | 0.533959 | 8_4:-48312581 | None:intergenic |
| GCAGCCGCGAAAACCAAGCA+TGG | 0.537070 | 8_4:-48311674 | None:intergenic |
| CTGCTGAAGATGCCGAGGAA+TGG | 0.542700 | 8_4:+48310040 | Msa1329610:CDS |
| CAACTCTTGGGATAGTCCAA+GGG | 0.543248 | 8_4:+48308894 | Msa1329610:CDS |
| GCTGTTGTAGCTCGTGGATG+GGG | 0.543789 | 8_4:+48310674 | Msa1329610:CDS |
| TCTTCTCTAAGCTATAAGGT+TGG | 0.545042 | 8_4:+48312245 | Msa1329610:CDS |
| CTAATAATCGGATTGTTACT+GGG | 0.546088 | 8_4:-48311525 | None:intergenic |
| CGGGTGTTCACCTTTGGCAA+AGG | 0.546332 | 8_4:+48306860 | Msa1329610:five_prime_UTR |
| GAGAAAGTGTTCTGTGAGAT+GGG | 0.547694 | 8_4:+48312221 | Msa1329610:CDS |
| AGCTACAGACATGGTCAATG+AGG | 0.549342 | 8_4:+48309522 | Msa1329610:CDS |
| AAGAACAAAGTGGTTGCCAC+TGG | 0.552284 | 8_4:+48309973 | Msa1329610:CDS |
| GACTCACTGAAACAGCGGCT+TGG | 0.553809 | 8_4:-48311908 | None:intergenic |
| TTTGGCAAAGGTAGAAGTGA+TGG | 0.554474 | 8_4:+48306872 | Msa1329610:five_prime_UTR |
| TATTCGTTCTGCAATCAAGA+TGG | 0.555466 | 8_4:+48309555 | Msa1329610:CDS |
| TTCACTAGAAATCCAAGCAC+TGG | 0.555536 | 8_4:+48309027 | Msa1329610:CDS |
| AATGTGAAGAACCTACCAAA+TGG | 0.556468 | 8_4:+48307202 | Msa1329610:CDS |
| AATGTCTATGTTGAAGCTAA+GGG | 0.556560 | 8_4:+48308718 | Msa1329610:CDS |
| ATCACTTCTACCTTTGCCAA+AGG | 0.558590 | 8_4:-48306870 | None:intergenic |
| AGCTGCACTAGTTGCTGATG+AGG | 0.561217 | 8_4:+48312289 | Msa1329610:CDS |
| TCCTAGAATCACCTCGCCTG+TGG | 0.564037 | 8_4:-48310894 | None:intergenic |
| AGCCAAATGTCATTTGGGTA+AGG | 0.565475 | 8_4:-48312493 | None:intergenic |
| AAGAAGCAGAAATATTCTCT+AGG | 0.566284 | 8_4:+48311626 | Msa1329610:CDS |
| CATGCTGCTGTTGTAGCTCG+TGG | 0.566313 | 8_4:+48310668 | Msa1329610:CDS |
| GTTGGAATATGCGGAGAGCA+TGG | 0.567765 | 8_4:+48313014 | Msa1329610:CDS |
| TCGGTTGATATAGTGAGTCC+AGG | 0.567950 | 8_4:-48307157 | None:intergenic |
| GCTACAGACATGGTCAATGA+GGG | 0.571478 | 8_4:+48309523 | Msa1329610:CDS |
| TAATCAGTTCCTACATCCAC+AGG | 0.573251 | 8_4:+48309594 | Msa1329610:CDS |
| TTTGCAGCATGACCCATTCG+AGG | 0.573401 | 8_4:+48312568 | Msa1329610:CDS |
| CACCAGAGCGAACAGAGACA+AGG | 0.574055 | 8_4:-48307306 | None:intergenic |
| TGTGTCCATCATTCCAGGCA+TGG | 0.575045 | 8_4:-48308293 | None:intergenic |
| TTTCTTTATGTGTAGTTGGG+AGG | 0.575150 | 8_4:+48307085 | Msa1329610:intron |
| CTGGGAGGCCATCCATTGCA+TGG | 0.575642 | 8_4:-48311507 | None:intergenic |
| AAGGGAGAAAAGTTTCCCTC+AGG | 0.576363 | 8_4:+48308736 | Msa1329610:CDS |
| ATGATAGGTGGTTGTAATTG+GGG | 0.576454 | 8_4:+48310829 | Msa1329610:intron |
| TCAGGAAGAAATTCATGAAG+TGG | 0.578057 | 8_4:-48311553 | None:intergenic |
| GATTCCAATTGCTAGGCTTG+CGG | 0.579903 | 8_4:+48313190 | Msa1329610:CDS |
| GAGACAAGTCCAGAGGACAT+TGG | 0.583747 | 8_4:+48310593 | Msa1329610:CDS |
| GAATCACTACAAGGATATGA+TGG | 0.584035 | 8_4:+48309318 | Msa1329610:CDS |
| CAGCCGCGAAAACCAAGCAT+GGG | 0.584352 | 8_4:-48311673 | None:intergenic |
| TTCTCCTCCGGCATTAAGCG+AGG | 0.585326 | 8_4:+48310928 | Msa1329610:CDS |
| GCTGCAAAATCCCAGCAGAA+AGG | 0.590533 | 8_4:-48312553 | None:intergenic |
| GGGGATATGGTAATATCAGA+AGG | 0.593273 | 8_4:+48310848 | Msa1329610:CDS |
| ATGTATATACCTGTGGATGT+AGG | 0.597911 | 8_4:-48309603 | None:intergenic |
| AGTGAACTAACTTCTCAGAC+AGG | 0.598492 | 8_4:+48311598 | Msa1329610:CDS |
| CTGTTCAAGAAAATAGATTG+TGG | 0.598558 | 8_4:+48309449 | Msa1329610:CDS |
| GGCTACAGTAGAGATGATGT+TGG | 0.600752 | 8_4:+48312512 | Msa1329610:CDS |
| CCTCCCACAAACCATTTGGT+AGG | 0.601228 | 8_4:-48307213 | None:intergenic |
| TCTTGGATTGAATGATGAAG+TGG | 0.606505 | 8_4:+48308324 | Msa1329610:CDS |
| GCCGAGGAATGGCATGCACA+AGG | 0.608068 | 8_4:+48310051 | Msa1329610:CDS |
| TTGTCCTCAAACAATGAGTG+TGG | 0.609601 | 8_4:-48308607 | None:intergenic |
| ATTGGCATCTTGACAGCTAG+AGG | 0.610170 | 8_4:+48310632 | Msa1329610:CDS |
| AGATGCTTATAAGGAACTTG+AGG | 0.611268 | 8_4:+48309276 | Msa1329610:CDS |
| GGAAGAAATTCATGAAGTGG+AGG | 0.614194 | 8_4:-48311550 | None:intergenic |
| GATTATCAGGTTGGAATATG+CGG | 0.615365 | 8_4:+48313005 | Msa1329610:intron |
| GCAAAGAATGCAATAGAAGA+CGG | 0.618305 | 8_4:-48313044 | None:intergenic |
| GACAAGTCCAGAGGACATTG+GGG | 0.626278 | 8_4:+48310595 | Msa1329610:CDS |
| AAAGGCTAAAGGCTGTGAGA+AGG | 0.633234 | 8_4:+48311398 | Msa1329610:CDS |
| GCTGTTTCAGTGAGTCGCAA+TGG | 0.633248 | 8_4:+48311915 | Msa1329610:CDS |
| TGGCCATTACGCAAGAACAA+AGG | 0.634944 | 8_4:+48311428 | Msa1329610:CDS |
| AATTCTTGAGAATCACTACA+AGG | 0.637925 | 8_4:+48309309 | Msa1329610:CDS |
| TGATCAAATAAGGAAGCTGA+AGG | 0.638289 | 8_4:+48310976 | Msa1329610:CDS |
| ACTTTGCAGGACTGAACACA+TGG | 0.638986 | 8_4:+48311164 | Msa1329610:CDS |
| GCAGCTCAAGTTGCAGTGTG+AGG | 0.641089 | 8_4:+48313212 | Msa1329610:CDS |
| ATTGCGACTCACTGAAACAG+CGG | 0.642670 | 8_4:-48311913 | None:intergenic |
| AGGGGATGCAGGCAAACCAG+TGG | 0.643058 | 8_4:-48309989 | None:intergenic |
| AGGAACTGATTAAGATGTTG+TGG | 0.643869 | 8_4:-48309583 | None:intergenic |
| GCTAGAAGAAATGGTGCACA+AGG | 0.646679 | 8_4:+48311135 | Msa1329610:CDS |
| GGTACTTGACCAGAAAGGTG+TGG | 0.646929 | 8_4:+48312827 | Msa1329610:intron |
| TTACAGGTACTTGACCAGAA+AGG | 0.649625 | 8_4:+48312822 | Msa1329610:intron |
| AAATCCTCGCTTAATGCCGG+AGG | 0.651577 | 8_4:-48310932 | None:intergenic |
| GAAACATTAATCAGATAACT+GGG | 0.658984 | 8_4:+48308929 | Msa1329610:CDS |
| GTACTTGACCAGAAAGGTGT+GGG | 0.660833 | 8_4:+48312828 | Msa1329610:CDS |
| ATCTAAGTACAAGAACAAAG+TGG | 0.663856 | 8_4:+48309963 | Msa1329610:CDS |
| AAAGGCATTAAACATGACAC+AGG | 0.677867 | 8_4:+48308652 | Msa1329610:CDS |
| CTACAGACATGGTCAATGAG+GGG | 0.682158 | 8_4:+48309524 | Msa1329610:CDS |
| GGCATCTTGACAGCTAGAGG+TGG | 0.682873 | 8_4:+48310635 | Msa1329610:CDS |
| GAGCGAACAGAGACAAGGAG+AGG | 0.687792 | 8_4:-48307301 | None:intergenic |
| GCTGAATGGATCCACAGGCG+AGG | 0.692849 | 8_4:+48310883 | Msa1329610:CDS |
| AAGGACAGAGACAAGTCCAG+AGG | 0.697658 | 8_4:+48310586 | Msa1329610:CDS |
| CCTACCAAATGGTTTGTGGG+AGG | 0.699192 | 8_4:+48307213 | Msa1329610:CDS |
| AATCAAAATAGCTACAGACA+TGG | 0.710159 | 8_4:+48309513 | Msa1329610:CDS |
| GGAATATGCGGAGAGCATGG+TGG | 0.718425 | 8_4:+48313017 | Msa1329610:CDS |
| GTTCACTGCTGAAGATGCCG+AGG | 0.719827 | 8_4:+48310035 | Msa1329610:CDS |
| ATAATCGGATTGTTACTGGG+AGG | 0.738128 | 8_4:-48311522 | None:intergenic |
| GTTGATATAGTGAGTCCAGG+AGG | 0.743820 | 8_4:-48307154 | None:intergenic |
| ACAAGTCCAGAGGACATTGG+GGG | 0.760716 | 8_4:+48310596 | Msa1329610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACAAAAATCATAAT+AGG | + | chr8_4:48309189-48309208 | Msa1329610:intron | 10.0% |
| !! | AAAAAACAAAAATCATAATA+GGG | + | chr8_4:48309190-48309209 | Msa1329610:intron | 10.0% |
| !! | GTTAATGAAAAATAAATAAA+TGG | - | chr8_4:48309872-48309891 | None:intergenic | 10.0% |
| !! | TAATGTCTTTAAATTAAAAA+AGG | + | chr8_4:48310331-48310350 | Msa1329610:intron | 10.0% |
| !! | ATACTTTATATATTAAGAAA+AGG | - | chr8_4:48312773-48312792 | None:intergenic | 10.0% |
| !! | AATATAGTTTCATATATTAC+TGG | + | chr8_4:48307790-48307809 | Msa1329610:intron | 15.0% |
| !!! | TTTAAATTTGATTCCTTTTA+TGG | + | chr8_4:48308212-48308231 | Msa1329610:intron | 15.0% |
| !!! | TTTTATTGTATGTTATACTT+AGG | + | chr8_4:48308573-48308592 | Msa1329610:intron | 15.0% |
| !! | TATTTACAAAAGAAAGTTAA+AGG | - | chr8_4:48309661-48309680 | None:intergenic | 15.0% |
| !! | ACTTGAAAAAAGATTATAAA+AGG | + | chr8_4:48309757-48309776 | Msa1329610:intron | 15.0% |
| !!! | TACTAATTTGTCAATAATAT+AGG | - | chr8_4:48310759-48310778 | None:intergenic | 15.0% |
| !! | ATAAATGGATATTATTATAC+TGG | - | chr8_4:48310808-48310827 | None:intergenic | 15.0% |
| !! | TAAAGATTTAAGTAAGAAAA+AGG | - | chr8_4:48311997-48312016 | None:intergenic | 15.0% |
| !!! | TTTTTTTTGACAAAGAAAAT+AGG | + | chr8_4:48313324-48313343 | Msa1329610:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGACAAAGAAAATA+GGG | + | chr8_4:48313325-48313344 | Msa1329610:three_prime_UTR | 15.0% |
| !!! | TAATTTTGTGCAAAATGAAA+TGG | + | chr8_4:48307252-48307271 | Msa1329610:CDS | 20.0% |
| !!! | AATTTTGTGCAAAATGAAAT+GGG | + | chr8_4:48307253-48307272 | Msa1329610:CDS | 20.0% |
| !! | AAACATCTTATGACAAATAA+CGG | - | chr8_4:48307473-48307492 | None:intergenic | 20.0% |
| !! | AAAAGTTCCATTGAATTTAT+AGG | + | chr8_4:48308170-48308189 | Msa1329610:intron | 20.0% |
| !! | TCAAATTGAAATGATATTGT+AGG | + | chr8_4:48309414-48309433 | Msa1329610:intron | 20.0% |
| !! | ATACTCATTCAAAACTTTAA+GGG | - | chr8_4:48310407-48310426 | None:intergenic | 20.0% |
| !! | ATACATACTTGCATTATTAA+AGG | + | chr8_4:48310562-48310581 | Msa1329610:intron | 20.0% |
| !!! | TAATTTGTCAATAATATAGG+AGG | - | chr8_4:48310756-48310775 | None:intergenic | 20.0% |
| !! | TAATATCCATTTATGATGAT+AGG | + | chr8_4:48310814-48310833 | Msa1329610:intron | 20.0% |
| !! | TGAATGCACTAAAATTTAAA+AGG | + | chr8_4:48311230-48311249 | Msa1329610:intron | 20.0% |
| !! | ATTTTGTGCAAAATGAAATG+GGG | + | chr8_4:48307254-48307273 | Msa1329610:CDS | 25.0% |
| ! | CAAAGTGAAATATAAGGAAT+AGG | - | chr8_4:48307344-48307363 | None:intergenic | 25.0% |
| ! | ATTAAAGAAATCGCAAACAA+TGG | + | chr8_4:48307707-48307726 | Msa1329610:intron | 25.0% |
| !!! | TATTTGCTATATAATCACAG+CGG | - | chr8_4:48307774-48307793 | None:intergenic | 25.0% |
| ! | ATATATATAGTACTAGTGGA+GGG | + | chr8_4:48307843-48307862 | Msa1329610:intron | 25.0% |
| ! | AACGGTTTATATACTTAAGA+AGG | + | chr8_4:48307940-48307959 | Msa1329610:intron | 25.0% |
| ! | ATAACTTGAAGTTAAAAACC+TGG | - | chr8_4:48308046-48308065 | None:intergenic | 25.0% |
| ! | ATGCTAAATACAACCATAAA+AGG | - | chr8_4:48308228-48308247 | None:intergenic | 25.0% |
| !! | TTTAGTATCTTCCATTGATT+TGG | + | chr8_4:48308543-48308562 | Msa1329610:intron | 25.0% |
| ! | AAAAGTTTCAACCAAATCAA+TGG | - | chr8_4:48308557-48308576 | None:intergenic | 25.0% |
| ! | TGTATGTTATACTTAGGTAA+TGG | + | chr8_4:48308579-48308598 | Msa1329610:intron | 25.0% |
| !!! | AACCAAATTTTTGAGATCAT+TGG | - | chr8_4:48308686-48308705 | None:intergenic | 25.0% |
| ! | GAAACATTAATCAGATAACT+GGG | + | chr8_4:48308929-48308948 | Msa1329610:CDS | 25.0% |
| ! | AATATTCAATCTATGGTGTT+TGG | + | chr8_4:48308970-48308989 | Msa1329610:CDS | 25.0% |
| ! | TAATTAACGTAATCCATGTA+CGG | + | chr8_4:48309631-48309650 | Msa1329610:intron | 25.0% |
| !! | TCATTTTGCTAAATAATGCA+CGG | + | chr8_4:48309787-48309806 | Msa1329610:intron | 25.0% |
| !!! | AAGTTTACTTGTTTAGTTTG+AGG | + | chr8_4:48309936-48309955 | Msa1329610:intron | 25.0% |
| ! | AAAAGAGATAAGGAAAATGA+TGG | - | chr8_4:48310115-48310134 | None:intergenic | 25.0% |
| ! | AAGACATTGGATATAATGAA+GGG | - | chr8_4:48310143-48310162 | None:intergenic | 25.0% |
| ! | TAAGACATTGGATATAATGA+AGG | - | chr8_4:48310144-48310163 | None:intergenic | 25.0% |
| ! | TTCATTATATCCAATGTCTT+AGG | + | chr8_4:48310143-48310162 | Msa1329610:intron | 25.0% |
| ! | TCATTATATCCAATGTCTTA+GGG | + | chr8_4:48310144-48310163 | Msa1329610:intron | 25.0% |
| ! | GATACTCATTCAAAACTTTA+AGG | - | chr8_4:48310408-48310427 | None:intergenic | 25.0% |
| ! | TAGAGATACTTTATACATAC+TGG | - | chr8_4:48310474-48310493 | None:intergenic | 25.0% |
| ! | TACTTGCATTATTAAAGGTA+AGG | + | chr8_4:48310567-48310586 | Msa1329610:intron | 25.0% |
| ! | CAATGATATGAGTGAAATTA+CGG | - | chr8_4:48311065-48311084 | None:intergenic | 25.0% |
| ! | AATTTAAAAGGCTTGTATTG+TGG | + | chr8_4:48311242-48311261 | Msa1329610:intron | 25.0% |
| ! | CAAACTTATAGCATATAAAG+AGG | - | chr8_4:48311351-48311370 | None:intergenic | 25.0% |
| ! | CTCTTTATATGCTATAAGTT+TGG | + | chr8_4:48311349-48311368 | Msa1329610:intron | 25.0% |
| ! | TCAAAATCTGATTGTTGATA+AGG | - | chr8_4:48311478-48311497 | None:intergenic | 25.0% |
| !! | TTATCAACAATCAGATTTTG+AGG | + | chr8_4:48311477-48311496 | Msa1329610:CDS | 25.0% |
| !! | TATCAACAATCAGATTTTGA+GGG | + | chr8_4:48311478-48311497 | Msa1329610:CDS | 25.0% |
| ! | CTACTGATAAATTATGAACT+TGG | - | chr8_4:48311777-48311796 | None:intergenic | 25.0% |
| ! | CAAGTTCATAATTTATCAGT+AGG | + | chr8_4:48311775-48311794 | Msa1329610:intron | 25.0% |
| ! | TCAAACATCAGTAAATCATA+GGG | - | chr8_4:48311815-48311834 | None:intergenic | 25.0% |
| ! | ATGATAGATGTGAAACAAAT+CGG | - | chr8_4:48312029-48312048 | None:intergenic | 25.0% |
| !!! | TAACATGAAGCAACATTTTT+TGG | + | chr8_4:48312097-48312116 | Msa1329610:intron | 25.0% |
| !!! | GAAGCAGATTTTTTTTCATT+TGG | + | chr8_4:48312461-48312480 | Msa1329610:CDS | 25.0% |
| ! | GGAAATAACGATAAAAGTAA+TGG | - | chr8_4:48312717-48312736 | None:intergenic | 25.0% |
| ! | TATTTCCATTATTGCATAGT+TGG | + | chr8_4:48312730-48312749 | Msa1329610:intron | 25.0% |
| ! | ACATTATTGACAACAATTAC+AGG | + | chr8_4:48312806-48312825 | Msa1329610:intron | 25.0% |
| ! | TGTTAAGTTACCTTCAAATT+TGG | - | chr8_4:48312897-48312916 | None:intergenic | 25.0% |
| ! | CATCTTGGTTATTCTTAATA+TGG | + | chr8_4:48312948-48312967 | Msa1329610:intron | 25.0% |
| !! | GATTAATTACGTTGATTATC+AGG | + | chr8_4:48312992-48313011 | Msa1329610:intron | 25.0% |
| ! | GTAGTCAAATTGAAAATTTG+AGG | + | chr8_4:48313155-48313174 | Msa1329610:intron | 25.0% |
| ! | GCAAAATAATTGTGGTTTAT+TGG | + | chr8_4:48313283-48313302 | Msa1329610:three_prime_UTR | 25.0% |
| ! | TTATTGGAGAAAACATTGTT+TGG | + | chr8_4:48313299-48313318 | Msa1329610:three_prime_UTR | 25.0% |
| TAGATAAAGAATGCTTACCA+AGG | - | chr8_4:48306915-48306934 | None:intergenic | 30.0% | |
| CTAAAACACTAAACACAGTA+TGG | + | chr8_4:48307002-48307021 | Msa1329610:intron | 30.0% | |
| TAAAGAAAGCAGCAATTCAA+AGG | - | chr8_4:48307073-48307092 | None:intergenic | 30.0% | |
| TGCTTTCTTTATGTGTAGTT+GGG | + | chr8_4:48307082-48307101 | Msa1329610:intron | 30.0% | |
| ! | TTTTGTGCAAAATGAAATGG+GGG | + | chr8_4:48307255-48307274 | Msa1329610:CDS | 30.0% |
| CTTCACACATGACATAATAA+AGG | - | chr8_4:48307634-48307653 | None:intergenic | 30.0% | |
| CTTTATTATGTCATGTGTGA+AGG | + | chr8_4:48307632-48307651 | Msa1329610:intron | 30.0% | |
| ATATATTACTGGAGTGAAGT+AGG | + | chr8_4:48307801-48307820 | Msa1329610:intron | 30.0% | |
| TATATTACTGGAGTGAAGTA+GGG | + | chr8_4:48307802-48307821 | Msa1329610:intron | 30.0% | |
| AGCCATATATATAGTACTAG+TGG | + | chr8_4:48307839-48307858 | Msa1329610:intron | 30.0% | |
| CTCCACTAGTACTATATATA+TGG | - | chr8_4:48307844-48307863 | None:intergenic | 30.0% | |
| CATATATATAGTACTAGTGG+AGG | + | chr8_4:48307842-48307861 | Msa1329610:intron | 30.0% | |
| AGTATATAAACCGTTGAGTA+TGG | - | chr8_4:48307935-48307954 | None:intergenic | 30.0% | |
| AGTATTGCTTAGCTCAATTT+AGG | + | chr8_4:48308011-48308030 | Msa1329610:intron | 30.0% | |
| ! | CAATTTAGGATGTATATTCC+AGG | + | chr8_4:48308025-48308044 | Msa1329610:intron | 30.0% |
| !!! | GGAACTTTTTAGTTTTCAAG+TGG | - | chr8_4:48308159-48308178 | None:intergenic | 30.0% |
| ACGTACACCTATAAATTCAA+TGG | - | chr8_4:48308180-48308199 | None:intergenic | 30.0% | |
| CTAAAAGATGACGTTCATTA+AGG | - | chr8_4:48308528-48308547 | None:intergenic | 30.0% | |
| GAAAAGCTAAAGCAATCAAA+AGG | + | chr8_4:48308634-48308653 | Msa1329610:CDS | 30.0% | |
| AGCCAATGATCTCAAAAATT+TGG | + | chr8_4:48308681-48308700 | Msa1329610:CDS | 30.0% | |
| AATGTCTATGTTGAAGCTAA+GGG | + | chr8_4:48308718-48308737 | Msa1329610:CDS | 30.0% | |
| ! | ATAAATCAAGAGAGGTTTTG+TGG | - | chr8_4:48308825-48308844 | None:intergenic | 30.0% |
| TGCAATTGATAAATCAAGAG+AGG | - | chr8_4:48308833-48308852 | None:intergenic | 30.0% | |
| !! | TTAAAGCTGTTTTCAACTCT+TGG | + | chr8_4:48308881-48308900 | Msa1329610:CDS | 30.0% |
| !! | TAAAGCTGTTTTCAACTCTT+GGG | + | chr8_4:48308882-48308901 | Msa1329610:CDS | 30.0% |
| CGAAACATTAATCAGATAAC+TGG | + | chr8_4:48308928-48308947 | Msa1329610:CDS | 30.0% | |
| TGCTGTGAATATTCAATCTA+TGG | + | chr8_4:48308963-48308982 | Msa1329610:CDS | 30.0% | |
| ! | ATCTATGGTGTTTGGTAATA+TGG | + | chr8_4:48308978-48308997 | Msa1329610:CDS | 30.0% |
| ! | TCTATGGTGTTTGGTAATAT+GGG | + | chr8_4:48308979-48308998 | Msa1329610:CDS | 30.0% |
| ACTGGTGAAAAGAAACTTTA+TGG | + | chr8_4:48309045-48309064 | Msa1329610:CDS | 30.0% | |
| CTACTAAATGCAAATCATAG+TGG | - | chr8_4:48309137-48309156 | None:intergenic | 30.0% | |
| AATTCTTGAGAATCACTACA+AGG | + | chr8_4:48309309-48309328 | Msa1329610:CDS | 30.0% | |
| CTGTTCAAGAAAATAGATTG+TGG | + | chr8_4:48309449-48309468 | Msa1329610:CDS | 30.0% | |
| AATCAAAATAGCTACAGACA+TGG | + | chr8_4:48309513-48309532 | Msa1329610:CDS | 30.0% | |
| TACAACAATGTATATACCTG+TGG | - | chr8_4:48309613-48309632 | None:intergenic | 30.0% | |
| AAATACTATATAATCGTGCG+AGG | - | chr8_4:48309718-48309737 | None:intergenic | 30.0% | |
| TCGCACGATTATATAGTATT+TGG | + | chr8_4:48309717-48309736 | Msa1329610:intron | 30.0% | |
| ACTTTGTTCTTGTACTTAGA+TGG | - | chr8_4:48309964-48309983 | None:intergenic | 30.0% | |
| ATCTAAGTACAAGAACAAAG+TGG | + | chr8_4:48309963-48309982 | Msa1329610:CDS | 30.0% | |
| AGACATTGGATATAATGAAG+GGG | - | chr8_4:48310142-48310161 | None:intergenic | 30.0% | |
| ! | AAAACTTTAAGGGTGTGTTT+GGG | - | chr8_4:48310397-48310416 | None:intergenic | 30.0% |
| AGTATCAATCCATTTGTGTT+TGG | + | chr8_4:48310422-48310441 | Msa1329610:intron | 30.0% | |
| CTAGTCATGAAACTAAATCT+AGG | - | chr8_4:48310505-48310524 | None:intergenic | 30.0% | |
| ! | CTAGATTTAGTTTCATGACT+AGG | + | chr8_4:48310503-48310522 | Msa1329610:intron | 30.0% |
| AGACTCGTTTACTTCAATAT+TGG | - | chr8_4:48310723-48310742 | None:intergenic | 30.0% | |
| TATCCATTTATGATGATAGG+TGG | + | chr8_4:48310817-48310836 | Msa1329610:intron | 30.0% | |
| ATTTGGAAACTTTCATGTCT+TGG | + | chr8_4:48310951-48310970 | Msa1329610:CDS | 30.0% | |
| TTTGGAAACTTTCATGTCTT+GGG | + | chr8_4:48310952-48310971 | Msa1329610:CDS | 30.0% | |
| TCATATCATTGTTGTGTATC+AGG | + | chr8_4:48311074-48311093 | Msa1329610:intron | 30.0% | |
| !!! | AGTTTTTTGCTTCAGATGAA+AGG | + | chr8_4:48311380-48311399 | Msa1329610:intron | 30.0% |
| CTAATAATCGGATTGTTACT+GGG | - | chr8_4:48311528-48311547 | None:intergenic | 30.0% | |
| TCTAATAATCGGATTGTTAC+TGG | - | chr8_4:48311529-48311548 | None:intergenic | 30.0% | |
| AAGAAGCAGAAATATTCTCT+AGG | + | chr8_4:48311626-48311645 | Msa1329610:CDS | 30.0% | |
| GTCAAACATCAGTAAATCAT+AGG | - | chr8_4:48311816-48311835 | None:intergenic | 30.0% | |
| ! | CAATTTGAAATCATGTGAAC+AGG | + | chr8_4:48311835-48311854 | Msa1329610:intron | 30.0% |
| GACATCAAGTGAGTTTAATA+AGG | + | chr8_4:48312189-48312208 | Msa1329610:CDS | 30.0% | |
| ! | AGAAAGTGTAAAGACTAAAG+AGG | - | chr8_4:48312409-48312428 | None:intergenic | 30.0% |
| TCATTTGCAATCTACACAAA+TGG | - | chr8_4:48312443-48312462 | None:intergenic | 30.0% | |
| AATCAAAATGTGCACAGAAA+AGG | + | chr8_4:48312857-48312876 | Msa1329610:CDS | 30.0% | |
| ATCAAAATGTGCACAGAAAA+GGG | + | chr8_4:48312858-48312877 | Msa1329610:CDS | 30.0% | |
| TACTGCTAAACCAAATTTGA+AGG | + | chr8_4:48312884-48312903 | Msa1329610:CDS | 30.0% | |
| CAAAATTTGATCACACATCT+TGG | + | chr8_4:48312933-48312952 | Msa1329610:intron | 30.0% | |
| ! | AATTACGTTGATTATCAGGT+TGG | + | chr8_4:48312996-48313015 | Msa1329610:intron | 30.0% |
| AACCAAAAATCTAACCTGAA+CGG | - | chr8_4:48313101-48313120 | None:intergenic | 30.0% | |
| AAACAAAGCAATGAAGTCCT+TGG | + | chr8_4:48306895-48306914 | Msa1329610:exon | 35.0% | |
| AAACACAGTATGGCAAAACA+AGG | + | chr8_4:48307012-48307031 | Msa1329610:intron | 35.0% | |
| CTGCTTTCTTTATGTGTAGT+TGG | + | chr8_4:48307081-48307100 | Msa1329610:intron | 35.0% | |
| TTTCTTTATGTGTAGTTGGG+AGG | + | chr8_4:48307085-48307104 | Msa1329610:intron | 35.0% | |
| TTGATATTCTCGACATGCTT+CGG | - | chr8_4:48307179-48307198 | None:intergenic | 35.0% | |
| AATGTGAAGAACCTACCAAA+TGG | + | chr8_4:48307202-48307221 | Msa1329610:CDS | 35.0% | |
| !! | TTTTGAAGGATTCCCAAGAA+AGG | - | chr8_4:48307281-48307300 | None:intergenic | 35.0% |
| TCGGGACAAAGTGAAATATA+AGG | - | chr8_4:48307350-48307369 | None:intergenic | 35.0% | |
| AACCCAATTCAAACAAGTGT+CGG | - | chr8_4:48307369-48307388 | None:intergenic | 35.0% | |
| TATGCCTAATGCATAAGCAT+TGG | + | chr8_4:48307404-48307423 | Msa1329610:intron | 35.0% | |
| !!! | TAAGCATTGGTGACACTTTT+TGG | + | chr8_4:48307417-48307436 | Msa1329610:intron | 35.0% |
| !!! | AAGCATTGGTGACACTTTTT+GGG | + | chr8_4:48307418-48307437 | Msa1329610:intron | 35.0% |
| AGGTTGAAACACTCATTGTT+TGG | - | chr8_4:48307592-48307611 | None:intergenic | 35.0% | |
| TCAACCTCTGATCACATTTA+AGG | + | chr8_4:48307605-48307624 | Msa1329610:intron | 35.0% | |
| GTGTGAAGGAACTAGAAAAA+TGG | + | chr8_4:48307646-48307665 | Msa1329610:intron | 35.0% | |
| GGAACTAGAAAAATGGTGTA+AGG | + | chr8_4:48307653-48307672 | Msa1329610:intron | 35.0% | |
| GATCATTTGTTTCCGTTGTT+TGG | + | chr8_4:48307735-48307754 | Msa1329610:intron | 35.0% | |
| AGACAAAATTGGCCAAACAA+CGG | - | chr8_4:48307750-48307769 | None:intergenic | 35.0% | |
| TCACATATAGACACAGAAGA+GGG | - | chr8_4:48307911-48307930 | None:intergenic | 35.0% | |
| TATATGTGAGCCATACTCAA+CGG | + | chr8_4:48307922-48307941 | Msa1329610:intron | 35.0% | |
| !! | TAGGTGTACGTATTTTTGTC+TGG | + | chr8_4:48308189-48308208 | Msa1329610:intron | 35.0% |
| TGGAAATCTGATAGATGTAG+AGG | - | chr8_4:48308276-48308295 | None:intergenic | 35.0% | |
| ATGGACACAGTTCTTAATCT+TGG | + | chr8_4:48308307-48308326 | Msa1329610:CDS | 35.0% | |
| TCTTGGATTGAATGATGAAG+TGG | + | chr8_4:48308324-48308343 | Msa1329610:CDS | 35.0% | |
| AGACGTTTCTTAGACATGTT+TGG | + | chr8_4:48308397-48308416 | Msa1329610:CDS | 35.0% | |
| !! | TATTGCTTAGAGAAGTGTTG+CGG | - | chr8_4:48308473-48308492 | None:intergenic | 35.0% |
| ! | CGTTCATTAAGGAAGTGTAT+TGG | - | chr8_4:48308517-48308536 | None:intergenic | 35.0% |
| TATTCCACACTCATTGTTTG+AGG | + | chr8_4:48308603-48308622 | Msa1329610:CDS | 35.0% | |
| !! | AAAGGCATTAAACATGACAC+AGG | + | chr8_4:48308652-48308671 | Msa1329610:CDS | 35.0% |
| GAATGTCTATGTTGAAGCTA+AGG | + | chr8_4:48308717-48308736 | Msa1329610:CDS | 35.0% | |
| ! | GCTAATTCTAGTTGCTTCTT+TGG | - | chr8_4:48308859-48308878 | None:intergenic | 35.0% |
| TTTCGATACTTAATAGCCCT+TGG | - | chr8_4:48308913-48308932 | None:intergenic | 35.0% | |
| TAATCAGATAACTGGGCTAA+TGG | + | chr8_4:48308936-48308955 | Msa1329610:CDS | 35.0% | |
| AATCAGATAACTGGGCTAAT+GGG | + | chr8_4:48308937-48308956 | Msa1329610:CDS | 35.0% | |
| GGTAATATGGGAAATACTTC+AGG | + | chr8_4:48308991-48309010 | Msa1329610:CDS | 35.0% | |
| TCAAGTTCCTTATAAGCATC+TGG | - | chr8_4:48309277-48309296 | None:intergenic | 35.0% | |
| AGATGCTTATAAGGAACTTG+AGG | + | chr8_4:48309276-48309295 | Msa1329610:CDS | 35.0% | |
| GAATCACTACAAGGATATGA+TGG | + | chr8_4:48309318-48309337 | Msa1329610:CDS | 35.0% | |
| TATTCGTTCTGCAATCAAGA+TGG | + | chr8_4:48309555-48309574 | Msa1329610:CDS | 35.0% | |
| AGGAACTGATTAAGATGTTG+TGG | - | chr8_4:48309586-48309605 | None:intergenic | 35.0% | |
| ATGTATATACCTGTGGATGT+AGG | - | chr8_4:48309606-48309625 | None:intergenic | 35.0% | |
| AGTTAAAGGAAAACCGTACA+TGG | - | chr8_4:48309647-48309666 | None:intergenic | 35.0% | |
| !! | ACAAGGAAAGAGTGCAATTT+TGG | + | chr8_4:48310068-48310087 | Msa1329610:CDS | 35.0% |
| AAGGGGGAAAAAAAGAGATA+AGG | - | chr8_4:48310125-48310144 | None:intergenic | 35.0% | |
| GACATTGGATATAATGAAGG+GGG | - | chr8_4:48310141-48310160 | None:intergenic | 35.0% | |
| ! | CAAAACTTTAAGGGTGTGTT+TGG | - | chr8_4:48310398-48310417 | None:intergenic | 35.0% |
| !! | ACTGGTTTGATCTCTATGAT+GGG | - | chr8_4:48310456-48310475 | None:intergenic | 35.0% |
| !! | TACTGGTTTGATCTCTATGA+TGG | - | chr8_4:48310457-48310476 | None:intergenic | 35.0% |
| TGAAGTAAACGAGTCTAGAA+AGG | + | chr8_4:48310727-48310746 | Msa1329610:CDS | 35.0% | |
| CAACCACCTATCATCATAAA+TGG | - | chr8_4:48310823-48310842 | None:intergenic | 35.0% | |
| TGATGATAGGTGGTTGTAAT+TGG | + | chr8_4:48310827-48310846 | Msa1329610:intron | 35.0% | |
| GATGATAGGTGGTTGTAATT+GGG | + | chr8_4:48310828-48310847 | Msa1329610:intron | 35.0% | |
| ATGATAGGTGGTTGTAATTG+GGG | + | chr8_4:48310829-48310848 | Msa1329610:intron | 35.0% | |
| TGGTAATATCAGAAGGAGAA+TGG | + | chr8_4:48310855-48310874 | Msa1329610:CDS | 35.0% | |
| TGATCAAATAAGGAAGCTGA+AGG | + | chr8_4:48310976-48310995 | Msa1329610:CDS | 35.0% | |
| ! | CATTGTTGTGTATCAGGTTT+TGG | + | chr8_4:48311080-48311099 | Msa1329610:intron | 35.0% |
| GCAATAACAGCTAGAAGAAA+TGG | + | chr8_4:48311126-48311145 | Msa1329610:CDS | 35.0% | |
| TTTCCTTTGTTCTTGCGTAA+TGG | - | chr8_4:48311434-48311453 | None:intergenic | 35.0% | |
| GAAGTGGAGGATCTAATAAT+CGG | - | chr8_4:48311540-48311559 | None:intergenic | 35.0% | |
| TCAGGAAGAAATTCATGAAG+TGG | - | chr8_4:48311556-48311575 | None:intergenic | 35.0% | |
| CTTCATGAATTTCTTCCTGA+AGG | + | chr8_4:48311556-48311575 | Msa1329610:CDS | 35.0% | |
| TAGGATTGAAAAACTCTCTG+AGG | + | chr8_4:48311645-48311664 | Msa1329610:CDS | 35.0% | |
| ! | TGTAGTTCTACCAGAGATAA+TGG | + | chr8_4:48311941-48311960 | Msa1329610:CDS | 35.0% |
| !! | CCTGCTAGTTAAAGAGTATT+GGG | - | chr8_4:48312163-48312182 | None:intergenic | 35.0% |
| ! | TCCTGCTAGTTAAAGAGTAT+TGG | - | chr8_4:48312164-48312183 | None:intergenic | 35.0% |
| TCTTCTCTAAGCTATAAGGT+TGG | + | chr8_4:48312245-48312264 | Msa1329610:CDS | 35.0% | |
| ! | ACTGTAGCCAAATGTCATTT+GGG | - | chr8_4:48312501-48312520 | None:intergenic | 35.0% |
| TACTGTAGCCAAATGTCATT+TGG | - | chr8_4:48312502-48312521 | None:intergenic | 35.0% | |
| !! | GATTATCAGGTTGGAATATG+CGG | + | chr8_4:48313005-48313024 | Msa1329610:intron | 35.0% |
| GCAAAGAATGCAATAGAAGA+CGG | - | chr8_4:48313047-48313066 | None:intergenic | 35.0% | |
| ATTGCATTCTTTGCTCAACT+TGG | + | chr8_4:48313053-48313072 | Msa1329610:CDS | 35.0% | |
| ! | AAATTTGAGGACTCTTTTGC+AGG | + | chr8_4:48313168-48313187 | Msa1329610:intron | 35.0% |
| CTACAGCTGCAAAATAATTG+TGG | + | chr8_4:48313275-48313294 | Msa1329610:three_prime_UTR | 35.0% | |
| ATCACTTCTACCTTTGCCAA+AGG | - | chr8_4:48306873-48306892 | None:intergenic | 40.0% | |
| TTTGGCAAAGGTAGAAGTGA+TGG | + | chr8_4:48306872-48306891 | Msa1329610:five_prime_UTR | 40.0% | |
| TTATGTGTAGTTGGGAGGAA+AGG | + | chr8_4:48307090-48307109 | Msa1329610:intron | 40.0% | |
| TATGTGTAGTTGGGAGGAAA+GGG | + | chr8_4:48307091-48307110 | Msa1329610:intron | 40.0% | |
| TTGGCAGAAATGGCAACAAT+TGG | + | chr8_4:48307121-48307140 | Msa1329610:CDS | 40.0% | |
| AGAACCTACCAAATGGTTTG+TGG | + | chr8_4:48307209-48307228 | Msa1329610:CDS | 40.0% | |
| ! | GAACCTACCAAATGGTTTGT+GGG | + | chr8_4:48307210-48307229 | Msa1329610:CDS | 40.0% |
| TCCCGACACTTGTTTGAATT+GGG | + | chr8_4:48307364-48307383 | Msa1329610:intron | 40.0% | |
| ACCCAATTCAAACAAGTGTC+GGG | - | chr8_4:48307368-48307387 | None:intergenic | 40.0% | |
| GTCACCAATGCTTATGCATT+AGG | - | chr8_4:48307411-48307430 | None:intergenic | 40.0% | |
| GTGACCTTAAATGTGATCAG+AGG | - | chr8_4:48307612-48307631 | None:intergenic | 40.0% | |
| ATCACAGCGGTAGACAAAAT+TGG | - | chr8_4:48307761-48307780 | None:intergenic | 40.0% | |
| CACATATAGACACAGAAGAG+GGG | - | chr8_4:48307910-48307929 | None:intergenic | 40.0% | |
| CTCACATATAGACACAGAAG+AGG | - | chr8_4:48307912-48307931 | None:intergenic | 40.0% | |
| GAAGGAAAGTAACGCAACTT+AGG | + | chr8_4:48307958-48307977 | Msa1329610:intron | 40.0% | |
| ATCTATCAGATTTCCATGCC+TGG | + | chr8_4:48308280-48308299 | Msa1329610:intron | 40.0% | |
| TTGAATGATGAAGTGGTTGC+TGG | + | chr8_4:48308331-48308350 | Msa1329610:CDS | 40.0% | |
| TGAATGATGAAGTGGTTGCT+GGG | + | chr8_4:48308332-48308351 | Msa1329610:CDS | 40.0% | |
| TTGTCCTCAAACAATGAGTG+TGG | - | chr8_4:48308610-48308629 | None:intergenic | 40.0% | |
| !! | ATCAAGAGAGGTTTTGTGGA+TGG | - | chr8_4:48308821-48308840 | None:intergenic | 40.0% |
| ATGGGAAATACTTCAGGAAC+TGG | + | chr8_4:48308997-48309016 | Msa1329610:CDS | 40.0% | |
| TTCACTAGAAATCCAAGCAC+TGG | + | chr8_4:48309027-48309046 | Msa1329610:CDS | 40.0% | |
| ! | AGTTTCTTTTCACCAGTGCT+TGG | - | chr8_4:48309042-48309061 | None:intergenic | 40.0% |
| AGAGTTTCTCACTAATGCTC+AGG | + | chr8_4:48309068-48309087 | Msa1329610:CDS | 40.0% | |
| AAGATGTAGTTGCTGGAATC+AGG | + | chr8_4:48309215-48309234 | Msa1329610:CDS | 40.0% | |
| TTGCATGCCAGATGCTTATA+AGG | + | chr8_4:48309267-48309286 | Msa1329610:CDS | 40.0% | |
| TGGATGTTGCAATGTCGAAT+TGG | + | chr8_4:48309469-48309488 | Msa1329610:CDS | 40.0% | |
| ! | ATTGGAAAGCGTACTGGTAA+AGG | + | chr8_4:48309487-48309506 | Msa1329610:CDS | 40.0% |
| TAATCAGTTCCTACATCCAC+AGG | + | chr8_4:48309594-48309613 | Msa1329610:CDS | 40.0% | |
| CAATGTCTTAGGGTGTGTTT+GGG | + | chr8_4:48310154-48310173 | Msa1329610:intron | 40.0% | |
| TTTGGGAAGAGGGTTTAGTA+GGG | + | chr8_4:48310171-48310190 | Msa1329610:intron | 40.0% | |
| TTTGGGAAAAGGGTTTAGGA+GGG | - | chr8_4:48310380-48310399 | None:intergenic | 40.0% | |
| TGTGTTTGGGAAAAGGGTTT+AGG | - | chr8_4:48310384-48310403 | None:intergenic | 40.0% | |
| ! | TAAGGGTGTGTTTGGGAAAA+GGG | - | chr8_4:48310390-48310409 | None:intergenic | 40.0% |
| ! | TTAAGGGTGTGTTTGGGAAA+AGG | - | chr8_4:48310391-48310410 | None:intergenic | 40.0% |
| GCTAAGAGACCAAACACAAA+TGG | - | chr8_4:48310434-48310453 | None:intergenic | 40.0% | |
| TGTCTTGGGCTGATCAAATA+AGG | + | chr8_4:48310966-48310985 | Msa1329610:CDS | 40.0% | |
| CTAGCTGTTATTGCATCTTC+AGG | - | chr8_4:48311120-48311139 | None:intergenic | 40.0% | |
| AGAAATGGTGCACAAGGAAT+TGG | + | chr8_4:48311141-48311160 | Msa1329610:CDS | 40.0% | |
| TGCTTCAGATGAAAGGCTAA+AGG | + | chr8_4:48311387-48311406 | Msa1329610:CDS | 40.0% | |
| ! | TGAGGGAATTTTCCATGCAA+TGG | + | chr8_4:48311495-48311514 | Msa1329610:CDS | 40.0% |
| ! | GGAATTTTCCATGCAATGGA+TGG | + | chr8_4:48311499-48311518 | Msa1329610:CDS | 40.0% |
| ATAATCGGATTGTTACTGGG+AGG | - | chr8_4:48311525-48311544 | None:intergenic | 40.0% | |
| GGAAGAAATTCATGAAGTGG+AGG | - | chr8_4:48311553-48311572 | None:intergenic | 40.0% | |
| ATTTCTTCCTGAAGGTGACT+TGG | + | chr8_4:48311564-48311583 | Msa1329610:CDS | 40.0% | |
| AGTGAACTAACTTCTCAGAC+AGG | + | chr8_4:48311598-48311617 | Msa1329610:CDS | 40.0% | |
| GCAAGCATCATATTAAGAGG+AGG | - | chr8_4:48311708-48311727 | None:intergenic | 40.0% | |
| GCAGCAAGCATCATATTAAG+AGG | - | chr8_4:48311711-48311730 | None:intergenic | 40.0% | |
| TTGAAATCATGTGAACAGGC+TGG | + | chr8_4:48311839-48311858 | Msa1329610:intron | 40.0% | |
| TGAAATCATGTGAACAGGCT+GGG | + | chr8_4:48311840-48311859 | Msa1329610:intron | 40.0% | |
| ACAAGTGGAACCATTATCTC+TGG | - | chr8_4:48311954-48311973 | None:intergenic | 40.0% | |
| ! | GAGATAATGGTTCCACTTGT+TGG | + | chr8_4:48311954-48311973 | Msa1329610:intron | 40.0% |
| AAGAAAAAGGAACATGCCTG+TGG | - | chr8_4:48311984-48312003 | None:intergenic | 40.0% | |
| CCCAATACTCTTTAACTAGC+AGG | + | chr8_4:48312160-48312179 | Msa1329610:intron | 40.0% | |
| !! | TGAGAAAGTGTTCTGTGAGA+TGG | + | chr8_4:48312220-48312239 | Msa1329610:CDS | 40.0% |
| !! | GAGAAAGTGTTCTGTGAGAT+GGG | + | chr8_4:48312221-48312240 | Msa1329610:CDS | 40.0% |
| GGGTTCTTCTCTAAGCTATA+AGG | + | chr8_4:48312241-48312260 | Msa1329610:CDS | 40.0% | |
| ! | TGTCATTTGGGTAAGGTCAT+TGG | - | chr8_4:48312489-48312508 | None:intergenic | 40.0% |
| GACCTTACCCAAATGACATT+TGG | + | chr8_4:48312491-48312510 | Msa1329610:CDS | 40.0% | |
| ! | AGCCAAATGTCATTTGGGTA+AGG | - | chr8_4:48312496-48312515 | None:intergenic | 40.0% |
| TTCCTTCATACCTTTCTGCT+GGG | + | chr8_4:48312543-48312562 | Msa1329610:CDS | 40.0% | |
| CTATGCAACTAACCTCGAAT+GGG | - | chr8_4:48312583-48312602 | None:intergenic | 40.0% | |
| ACTATGCAACTAACCTCGAA+TGG | - | chr8_4:48312584-48312603 | None:intergenic | 40.0% | |
| ! | AGGTTAGTTGCATAGTTGTG+TGG | + | chr8_4:48312588-48312607 | Msa1329610:intron | 40.0% |
| TCGCACCAACTATGCAATAA+TGG | - | chr8_4:48312738-48312757 | None:intergenic | 40.0% | |
| ! | TTATTGCATAGTTGGTGCGA+TGG | + | chr8_4:48312738-48312757 | Msa1329610:intron | 40.0% |
| TTACAGGTACTTGACCAGAA+AGG | + | chr8_4:48312822-48312841 | Msa1329610:intron | 40.0% | |
| !! | CTCCGTTCAGGTTAGATTTT+TGG | + | chr8_4:48313096-48313115 | Msa1329610:intron | 40.0% |
| TTTGCAGGATTCCAATTGCT+AGG | + | chr8_4:48313183-48313202 | Msa1329610:intron | 40.0% | |
| ATTGGATTATCTGTGCCTCC+TGG | + | chr8_4:48307139-48307158 | Msa1329610:CDS | 45.0% | |
| GTTGATATAGTGAGTCCAGG+AGG | - | chr8_4:48307157-48307176 | None:intergenic | 45.0% | |
| ! | TCGGTTGATATAGTGAGTCC+AGG | - | chr8_4:48307160-48307179 | None:intergenic | 45.0% |
| ATCTCCTCCCACAAACCATT+TGG | - | chr8_4:48307220-48307239 | None:intergenic | 45.0% | |
| TTGTGGGAGGAGATACTTGA+AGG | + | chr8_4:48307226-48307245 | Msa1329610:CDS | 45.0% | |
| AATGAAATGGGGGCCTTTCT+TGG | + | chr8_4:48307265-48307284 | Msa1329610:CDS | 45.0% | |
| ATGAAATGGGGGCCTTTCTT+GGG | + | chr8_4:48307266-48307285 | Msa1329610:CDS | 45.0% | |
| !! | GAGACAAGGAGAGGTTTTGA+AGG | - | chr8_4:48307295-48307314 | None:intergenic | 45.0% |
| GTCCCGACACTTGTTTGAAT+TGG | + | chr8_4:48307363-48307382 | Msa1329610:intron | 45.0% | |
| GATTTCCATGCCTGGAATGA+TGG | + | chr8_4:48308288-48308307 | Msa1329610:intron | 45.0% | |
| AGAACTGTGTCCATCATTCC+AGG | - | chr8_4:48308301-48308320 | None:intergenic | 45.0% | |
| TGGCTTCAAAAAGTGGAGAG+CGG | + | chr8_4:48308356-48308375 | Msa1329610:CDS | 45.0% | |
| AAGGGAGAAAAGTTTCCCTC+AGG | + | chr8_4:48308736-48308755 | Msa1329610:CDS | 45.0% | |
| GTGTTGAAGTTAGCACCTGA+GGG | - | chr8_4:48308754-48308773 | None:intergenic | 45.0% | |
| ! | AGTGTTGAAGTTAGCACCTG+AGG | - | chr8_4:48308755-48308774 | None:intergenic | 45.0% |
| TCAACTCTTGGGATAGTCCA+AGG | + | chr8_4:48308893-48308912 | Msa1329610:CDS | 45.0% | |
| CAACTCTTGGGATAGTCCAA+GGG | + | chr8_4:48308894-48308913 | Msa1329610:CDS | 45.0% | |
| TAGGGAGAAGATGTAGTTGC+TGG | + | chr8_4:48309208-48309227 | Msa1329610:intron | 45.0% | |
| !! | CTCATGGTCTCTAGAACTTC+AGG | - | chr8_4:48309244-48309263 | None:intergenic | 45.0% |
| ATCTGGCATGCAAGTTCTCA+TGG | - | chr8_4:48309260-48309279 | None:intergenic | 45.0% | |
| ! | TGTCGAATTGGAAAGCGTAC+TGG | + | chr8_4:48309481-48309500 | Msa1329610:CDS | 45.0% |
| AGCTACAGACATGGTCAATG+AGG | + | chr8_4:48309522-48309541 | Msa1329610:CDS | 45.0% | |
| GCTACAGACATGGTCAATGA+GGG | + | chr8_4:48309523-48309542 | Msa1329610:CDS | 45.0% | |
| CTACAGACATGGTCAATGAG+GGG | + | chr8_4:48309524-48309543 | Msa1329610:CDS | 45.0% | |
| AAGAACAAAGTGGTTGCCAC+TGG | + | chr8_4:48309973-48309992 | Msa1329610:CDS | 45.0% | |
| CCAAACACACCCTAAGACAT+TGG | - | chr8_4:48310156-48310175 | None:intergenic | 45.0% | |
| CCAATGTCTTAGGGTGTGTT+TGG | + | chr8_4:48310153-48310172 | Msa1329610:intron | 45.0% | |
| TTAGGGTGTGTTTGGGAAGA+GGG | + | chr8_4:48310161-48310180 | Msa1329610:intron | 45.0% | |
| GTTTGGGAAGAGGGTTTAGT+AGG | + | chr8_4:48310170-48310189 | Msa1329610:intron | 45.0% | |
| TTGGGAAGAGGGTTTAGTAG+GGG | + | chr8_4:48310172-48310191 | Msa1329610:intron | 45.0% | |
| AAGAGGGTTTAGTAGGGGAA+GGG | + | chr8_4:48310177-48310196 | Msa1329610:intron | 45.0% | |
| AAAAGGGTTTAGGAGGGGAA+GGG | - | chr8_4:48310374-48310393 | None:intergenic | 45.0% | |
| TTGGGAAAAGGGTTTAGGAG+GGG | - | chr8_4:48310379-48310398 | None:intergenic | 45.0% | |
| GTTTGGGAAAAGGGTTTAGG+AGG | - | chr8_4:48310381-48310400 | None:intergenic | 45.0% | |
| AGACAAGTCCAGAGGACATT+GGG | + | chr8_4:48310594-48310613 | Msa1329610:CDS | 45.0% | |
| ATTGGCATCTTGACAGCTAG+AGG | + | chr8_4:48310632-48310651 | Msa1329610:CDS | 45.0% | |
| AAAGCAAGCACTTTCTCCTC+CGG | + | chr8_4:48310916-48310935 | Msa1329610:CDS | 45.0% | |
| TCCAAATCCTCGCTTAATGC+CGG | - | chr8_4:48310938-48310957 | None:intergenic | 45.0% | |
| GCTAGAAGAAATGGTGCACA+AGG | + | chr8_4:48311135-48311154 | Msa1329610:CDS | 45.0% | |
| CACAAGGAATTGGACTTTGC+AGG | + | chr8_4:48311151-48311170 | Msa1329610:CDS | 45.0% | |
| ACTTTGCAGGACTGAACACA+TGG | + | chr8_4:48311164-48311183 | Msa1329610:CDS | 45.0% | |
| AAAGGCTAAAGGCTGTGAGA+AGG | + | chr8_4:48311398-48311417 | Msa1329610:CDS | 45.0% | |
| GGCTGTGAGAAGGATGATAA+TGG | + | chr8_4:48311408-48311427 | Msa1329610:CDS | 45.0% | |
| TGGCCATTACGCAAGAACAA+AGG | + | chr8_4:48311428-48311447 | Msa1329610:CDS | 45.0% | |
| ! | TCTGAGGTTAATCCCATGCT+TGG | + | chr8_4:48311661-48311680 | Msa1329610:CDS | 45.0% |
| !! | AATCCCATGCTTGGTTTTCG+CGG | + | chr8_4:48311670-48311689 | Msa1329610:CDS | 45.0% |
| TCCAGAATTGACTGAGATGC+AGG | + | chr8_4:48311872-48311891 | Msa1329610:CDS | 45.0% | |
| ATTGCGACTCACTGAAACAG+CGG | - | chr8_4:48311916-48311935 | None:intergenic | 45.0% | |
| GGCTACAGTAGAGATGATGT+TGG | + | chr8_4:48312512-48312531 | Msa1329610:CDS | 45.0% | |
| CTTCCTTCATACCTTTCTGC+TGG | + | chr8_4:48312542-48312561 | Msa1329610:CDS | 45.0% | |
| ! | ATCCCAGCAGAAAGGTATGA+AGG | - | chr8_4:48312548-48312567 | None:intergenic | 45.0% |
| GTTGTGTGGTGTGTGATTTC+TGG | + | chr8_4:48312602-48312621 | Msa1329610:intron | 45.0% | |
| ! | GTACTTGACCAGAAAGGTGT+GGG | + | chr8_4:48312828-48312847 | Msa1329610:CDS | 45.0% |
| TTAGTTGACCCACACCTTTC+TGG | - | chr8_4:48312839-48312858 | None:intergenic | 45.0% | |
| GATTCCAATTGCTAGGCTTG+CGG | + | chr8_4:48313190-48313209 | Msa1329610:CDS | 45.0% | |
| TTAGACTGCTTCCTGTCTTG+TGG | + | chr8_4:48313243-48313262 | Msa1329610:three_prime_UTR | 45.0% | |
| GGGAGCAAACTTGGCAGAAA+TGG | + | chr8_4:48307111-48307130 | Msa1329610:CDS | 50.0% | |
| CCTCCCACAAACCATTTGGT+AGG | - | chr8_4:48307216-48307235 | None:intergenic | 50.0% | |
| ! | CCTACCAAATGGTTTGTGGG+AGG | + | chr8_4:48307213-48307232 | Msa1329610:CDS | 50.0% |
| TGTGTCCATCATTCCAGGCA+TGG | - | chr8_4:48308296-48308315 | None:intergenic | 50.0% | |
| TGATGAAGTGGTTGCTGGGT+TGG | + | chr8_4:48308336-48308355 | Msa1329610:CDS | 50.0% | |
| !! | GCTGGGTTGGCTTCAAAAAG+TGG | + | chr8_4:48308349-48308368 | Msa1329610:CDS | 50.0% |
| TCCTTGTGCATGCCATTCCT+CGG | - | chr8_4:48310055-48310074 | None:intergenic | 50.0% | |
| CTTAGGGTGTGTTTGGGAAG+AGG | + | chr8_4:48310160-48310179 | Msa1329610:intron | 50.0% | |
| GAAGAGGGTTTAGTAGGGGA+AGG | + | chr8_4:48310176-48310195 | Msa1329610:intron | 50.0% | |
| GAAAAGGGTTTAGGAGGGGA+AGG | - | chr8_4:48310375-48310394 | None:intergenic | 50.0% | |
| AAGGACAGAGACAAGTCCAG+AGG | + | chr8_4:48310586-48310605 | Msa1329610:CDS | 50.0% | |
| GAGACAAGTCCAGAGGACAT+TGG | + | chr8_4:48310593-48310612 | Msa1329610:CDS | 50.0% | |
| GACAAGTCCAGAGGACATTG+GGG | + | chr8_4:48310595-48310614 | Msa1329610:CDS | 50.0% | |
| ACAAGTCCAGAGGACATTGG+GGG | + | chr8_4:48310596-48310615 | Msa1329610:CDS | 50.0% | |
| TGCTGTTGTAGCTCGTGGAT+GGG | + | chr8_4:48310673-48310692 | Msa1329610:CDS | 50.0% | |
| !! | TGGGGAAAGTGTTGTGTGTC+TGG | + | chr8_4:48310692-48310711 | Msa1329610:CDS | 50.0% |
| GGAGAATGGATCTCGCTGAA+TGG | + | chr8_4:48310869-48310888 | Msa1329610:CDS | 50.0% | |
| ATCTCGCTGAATGGATCCAC+AGG | + | chr8_4:48310878-48310897 | Msa1329610:CDS | 50.0% | |
| AAATCCTCGCTTAATGCCGG+AGG | - | chr8_4:48310935-48310954 | None:intergenic | 50.0% | |
| TCCGGCATTAAGCGAGGATT+TGG | + | chr8_4:48310934-48310953 | Msa1329610:CDS | 50.0% | |
| ACATGTGCCAAGTCACCTTC+AGG | - | chr8_4:48311574-48311593 | None:intergenic | 50.0% | |
| GCCTGCATCTCAGTCAATTC+TGG | - | chr8_4:48311876-48311895 | None:intergenic | 50.0% | |
| ! | GCTGTTTCAGTGAGTCGCAA+TGG | + | chr8_4:48311915-48311934 | Msa1329610:CDS | 50.0% |
| ! | TCCACTTGTTGGTACACCAC+AGG | + | chr8_4:48311965-48311984 | Msa1329610:intron | 50.0% |
| TCAGCAACTAGTGCAGCTCT+TGG | - | chr8_4:48312287-48312306 | None:intergenic | 50.0% | |
| AGCTGCACTAGTTGCTGATG+AGG | + | chr8_4:48312289-48312308 | Msa1329610:CDS | 50.0% | |
| GCTGCAAAATCCCAGCAGAA+AGG | - | chr8_4:48312556-48312575 | None:intergenic | 50.0% | |
| TTTGCAGCATGACCCATTCG+AGG | + | chr8_4:48312568-48312587 | Msa1329610:CDS | 50.0% | |
| GGTACTTGACCAGAAAGGTG+TGG | + | chr8_4:48312827-48312846 | Msa1329610:intron | 50.0% | |
| GTTGGAATATGCGGAGAGCA+TGG | + | chr8_4:48313014-48313033 | Msa1329610:CDS | 50.0% | |
| ATGTCTCGTGTTCTCCGTTC+AGG | + | chr8_4:48313084-48313103 | Msa1329610:CDS | 50.0% | |
| CGGGTGTTCACCTTTGGCAA+AGG | + | chr8_4:48306860-48306879 | Msa1329610:five_prime_UTR | 55.0% | |
| GGGAGGAAAGGGAGCAAACT+TGG | + | chr8_4:48307102-48307121 | Msa1329610:CDS | 55.0% | |
| GAGCGAACAGAGACAAGGAG+AGG | - | chr8_4:48307304-48307323 | None:intergenic | 55.0% | |
| CTCCTTGTCTCTGTTCGCTC+TGG | + | chr8_4:48307304-48307323 | Msa1329610:intron | 55.0% | |
| CACCAGAGCGAACAGAGACA+AGG | - | chr8_4:48307309-48307328 | None:intergenic | 55.0% | |
| TAGACACAGAAGAGGGGCGA+GGG | - | chr8_4:48307904-48307923 | None:intergenic | 55.0% | |
| ATAGACACAGAAGAGGGGCG+AGG | - | chr8_4:48307905-48307924 | None:intergenic | 55.0% | |
| GTTCACTGCTGAAGATGCCG+AGG | + | chr8_4:48310035-48310054 | Msa1329610:CDS | 55.0% | |
| CTGCTGAAGATGCCGAGGAA+TGG | + | chr8_4:48310040-48310059 | Msa1329610:CDS | 55.0% | |
| AGGGTTTAGTAGGGGAAGGG+AGG | + | chr8_4:48310180-48310199 | Msa1329610:intron | 55.0% | |
| GGGTTTAGTAGGGGAAGGGA+GGG | + | chr8_4:48310181-48310200 | Msa1329610:intron | 55.0% | |
| GGTTTAGTAGGGGAAGGGAG+GGG | + | chr8_4:48310182-48310201 | Msa1329610:intron | 55.0% | |
| ! | GGGGGCATGCATTCAGCTAT+TGG | + | chr8_4:48310614-48310633 | Msa1329610:CDS | 55.0% |
| GGCATCTTGACAGCTAGAGG+TGG | + | chr8_4:48310635-48310654 | Msa1329610:CDS | 55.0% | |
| CATGCTGCTGTTGTAGCTCG+TGG | + | chr8_4:48310668-48310687 | Msa1329610:CDS | 55.0% | |
| CTGCTGTTGTAGCTCGTGGA+TGG | + | chr8_4:48310672-48310691 | Msa1329610:CDS | 55.0% | |
| GCTGTTGTAGCTCGTGGATG+GGG | + | chr8_4:48310674-48310693 | Msa1329610:CDS | 55.0% | |
| TCCACAGGCGAGGTGATTCT+AGG | + | chr8_4:48310893-48310912 | Msa1329610:CDS | 55.0% | |
| TCCTAGAATCACCTCGCCTG+TGG | - | chr8_4:48310897-48310916 | None:intergenic | 55.0% | |
| TTCTCCTCCGGCATTAAGCG+AGG | + | chr8_4:48310928-48310947 | Msa1329610:CDS | 55.0% | |
| CAGCCGCGAAAACCAAGCAT+GGG | - | chr8_4:48311676-48311695 | None:intergenic | 55.0% | |
| GACTCACTGAAACAGCGGCT+TGG | - | chr8_4:48311911-48311930 | None:intergenic | 55.0% | |
| GCCTGTGGTGTACCAACAAG+TGG | - | chr8_4:48311969-48311988 | None:intergenic | 55.0% | |
| ! | GGAATATGCGGAGAGCATGG+TGG | + | chr8_4:48313017-48313036 | Msa1329610:CDS | 55.0% |
| ! | GCAGCTCAAGTTGCAGTGTG+AGG | + | chr8_4:48313212-48313231 | Msa1329610:CDS | 55.0% |
| CTGCTTCCTGTCTTGTGGCA+TGG | + | chr8_4:48313248-48313267 | Msa1329610:three_prime_UTR | 55.0% | |
| AGAGAGCCATGCCACAAGAC+AGG | - | chr8_4:48313257-48313276 | None:intergenic | 55.0% | |
| ! | CTCTGTTCGCTCTGGTGCTG+CGG | + | chr8_4:48307312-48307331 | Msa1329610:intron | 60.0% |
| AGACACAGAAGAGGGGCGAG+GGG | - | chr8_4:48307903-48307922 | None:intergenic | 60.0% | |
| AGGGGATGCAGGCAAACCAG+TGG | - | chr8_4:48309992-48310011 | None:intergenic | 60.0% | |
| !! | ACTGGTTTGCCTGCATCCCC+TGG | + | chr8_4:48309991-48310010 | Msa1329610:CDS | 60.0% |
| GCCGAGGAATGGCATGCACA+AGG | + | chr8_4:48310051-48310070 | Msa1329610:CDS | 60.0% | |
| TTAGTAGGGGAAGGGAGGGG+AGG | + | chr8_4:48310185-48310204 | Msa1329610:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr8_4:48310369-48310388 | None:intergenic | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr8_4:48310370-48310389 | None:intergenic | 60.0% | |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr8_4:48310371-48310390 | None:intergenic | 60.0% | |
| TGCATGCCCCCAATGTCCTC+TGG | - | chr8_4:48310605-48310624 | None:intergenic | 60.0% | |
| GCTGAATGGATCCACAGGCG+AGG | + | chr8_4:48310883-48310902 | Msa1329610:CDS | 60.0% | |
| CTGGGAGGCCATCCATTGCA+TGG | - | chr8_4:48311510-48311529 | None:intergenic | 60.0% | |
| GCAGCCGCGAAAACCAAGCA+TGG | - | chr8_4:48311677-48311696 | None:intergenic | 60.0% | |
| !! | TGCTTGGTTTTCGCGGCTGC+AGG | + | chr8_4:48311677-48311696 | Msa1329610:CDS | 60.0% |
| GCTGCCGCAAGCCTAGCAAT+TGG | - | chr8_4:48313197-48313216 | None:intergenic | 60.0% | |
| CATCCCCTGGAGCTGCGGTT+GGG | + | chr8_4:48310004-48310023 | Msa1329610:CDS | 65.0% | |
| TAGGAGGGGAAGGGAGGGGA+GGG | - | chr8_4:48310365-48310384 | None:intergenic | 65.0% | |
| TTAGGAGGGGAAGGGAGGGG+AGG | - | chr8_4:48310366-48310385 | None:intergenic | 65.0% | |
| ACAGAAGAGGGGCGAGGGGC+GGG | - | chr8_4:48307899-48307918 | None:intergenic | 70.0% | |
| CACAGAAGAGGGGCGAGGGG+CGG | - | chr8_4:48307900-48307919 | None:intergenic | 70.0% | |
| GCCTGCATCCCCTGGAGCTG+CGG | + | chr8_4:48309999-48310018 | Msa1329610:CDS | 70.0% | |
| ACCGCAGCTCCAGGGGATGC+AGG | - | chr8_4:48310003-48310022 | None:intergenic | 70.0% | |
| GCATCCCCTGGAGCTGCGGT+TGG | + | chr8_4:48310003-48310022 | Msa1329610:CDS | 70.0% | |
| CTGCCCAACCGCAGCTCCAG+GGG | - | chr8_4:48310010-48310029 | None:intergenic | 70.0% | |
| CCTGCCCAACCGCAGCTCCA+GGG | - | chr8_4:48310011-48310030 | None:intergenic | 70.0% | |
| ACCTGCCCAACCGCAGCTCC+AGG | - | chr8_4:48310012-48310031 | None:intergenic | 70.0% | |
| AGAAGAGGGGCGAGGGGCGG+GGG | - | chr8_4:48307897-48307916 | None:intergenic | 75.0% | |
| CAGAAGAGGGGCGAGGGGCG+GGG | - | chr8_4:48307898-48307917 | None:intergenic | 75.0% | |
| CCCTGGAGCTGCGGTTGGGC+AGG | + | chr8_4:48310008-48310027 | Msa1329610:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 48306855 | 48313388 | 48306855 | ID=Msa1329610;Name=Msa1329610 |
| chr8_4 | mRNA | 48306855 | 48313388 | 48306855 | ID=Msa1329610-mRNA-1;Parent=Msa1329610;Name=Msa1329610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=50|0.88|0.88|1|1|1|18|156|843 |
| chr8_4 | exon | 48306855 | 48306916 | 48306855 | ID=Msa1329610-mRNA-1:exon:13878;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48307100 | 48307315 | 48307100 | ID=Msa1329610-mRNA-1:exon:13879;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48308289 | 48308426 | 48308289 | ID=Msa1329610-mRNA-1:exon:13880;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48308595 | 48308757 | 48308595 | ID=Msa1329610-mRNA-1:exon:13881;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48308854 | 48309089 | 48308854 | ID=Msa1329610-mRNA-1:exon:13882;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48309211 | 48309339 | 48309211 | ID=Msa1329610-mRNA-1:exon:13883;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48309436 | 48309615 | 48309436 | ID=Msa1329610-mRNA-1:exon:13884;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48309952 | 48310089 | 48309952 | ID=Msa1329610-mRNA-1:exon:13885;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48310584 | 48310748 | 48310584 | ID=Msa1329610-mRNA-1:exon:13886;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48310836 | 48310997 | 48310836 | ID=Msa1329610-mRNA-1:exon:13887;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48311096 | 48311185 | 48311096 | ID=Msa1329610-mRNA-1:exon:13888;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48311382 | 48311698 | 48311382 | ID=Msa1329610-mRNA-1:exon:13889;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48311857 | 48311962 | 48311857 | ID=Msa1329610-mRNA-1:exon:13890;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48312182 | 48312310 | 48312182 | ID=Msa1329610-mRNA-1:exon:13891;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48312452 | 48312589 | 48312452 | ID=Msa1329610-mRNA-1:exon:13892;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48312828 | 48312905 | 48312828 | ID=Msa1329610-mRNA-1:exon:13893;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48313014 | 48313105 | 48313014 | ID=Msa1329610-mRNA-1:exon:13894;Parent=Msa1329610-mRNA-1 |
| chr8_4 | exon | 48313190 | 48313388 | 48313190 | ID=Msa1329610-mRNA-1:exon:13895;Parent=Msa1329610-mRNA-1 |
| chr8_4 | five_prime_UTR | 48306855 | 48306904 | 48306855 | ID=Msa1329610-mRNA-1:five_prime_utr;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48306905 | 48306916 | 48306905 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48307100 | 48307315 | 48307100 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48308289 | 48308426 | 48308289 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48308595 | 48308757 | 48308595 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48308854 | 48309089 | 48308854 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48309211 | 48309339 | 48309211 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48309436 | 48309615 | 48309436 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48309952 | 48310089 | 48309952 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48310584 | 48310748 | 48310584 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48310836 | 48310997 | 48310836 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48311096 | 48311185 | 48311096 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48311382 | 48311698 | 48311382 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48311857 | 48311962 | 48311857 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48312182 | 48312310 | 48312182 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48312452 | 48312589 | 48312452 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48312828 | 48312905 | 48312828 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48313014 | 48313105 | 48313014 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | CDS | 48313190 | 48313232 | 48313190 | ID=Msa1329610-mRNA-1:cds;Parent=Msa1329610-mRNA-1 |
| chr8_4 | three_prime_UTR | 48313233 | 48313388 | 48313233 | ID=Msa1329610-mRNA-1:three_prime_utr;Parent=Msa1329610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
