Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216970 | AES91756.2 | 89.370 | 254 | 27 | 0 | 1 | 254 | 597 | 850 | 3.67e-155 | 463 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216970 | sp|F4JZJ2|NSH4_ARATH | 53.279 | 244 | 112 | 2 | 1 | 243 | 301 | 543 | 4.45e-79 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1216760 | Msa1216970 | 0.909620 | 4.656608e-82 | -8.615850e-47 |
| Msa1216960 | Msa1216970 | 0.824443 | 8.048522e-54 | -8.615850e-47 |
| Msa1216970 | Msa1217100 | 0.856329 | 3.463477e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216970 | MtrunA17_Chr4g0066541 | 89.370 | 254 | 27 | 0 | 1 | 254 | 640 | 893 | 1.90e-158 | 462 |
| Msa1216970 | MtrunA17_Chr4g0066571 | 83.333 | 252 | 42 | 0 | 1 | 252 | 679 | 930 | 2.42e-145 | 430 |
| Msa1216970 | MtrunA17_Chr2g0286771 | 71.784 | 241 | 67 | 1 | 1 | 240 | 58 | 298 | 8.08e-124 | 354 |
| Msa1216970 | MtrunA17_Chr2g0286751 | 73.029 | 241 | 64 | 1 | 1 | 240 | 637 | 877 | 1.67e-110 | 338 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1216970 | AT5G18890.1 | 53.279 | 244 | 112 | 2 | 1 | 243 | 301 | 543 | 4.52e-80 | 251 |
| Msa1216970 | AT5G18860.1 | 52.720 | 239 | 112 | 1 | 1 | 238 | 650 | 888 | 8.30e-74 | 241 |
| Msa1216970 | AT5G18860.2 | 52.720 | 239 | 112 | 1 | 1 | 238 | 650 | 888 | 8.30e-74 | 241 |
Find 209 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATCTCCTTTGTGATTAT+TGG | 0.164889 | 8_1:+79150106 | None:intergenic |
| ATGGGCTTCACCTCAAATTT+TGG | 0.178837 | 8_1:+79147223 | None:intergenic |
| TAACGGACCCTTGACTAATT+TGG | 0.185692 | 8_1:-79148224 | Msa1216970:CDS |
| CTCGATTCTGACACTCTTTA+TGG | 0.191374 | 8_1:-79148635 | Msa1216970:five_prime_UTR |
| TTATCTCCTTTGTGATTATT+GGG | 0.230423 | 8_1:+79150107 | None:intergenic |
| TGTGGAACATATTTATATAA+TGG | 0.242560 | 8_1:-79151336 | Msa1216970:five_prime_UTR |
| GGCTCCAATCCATTATTTAA+TGG | 0.244145 | 8_1:-79150014 | Msa1216970:five_prime_UTR |
| TATATGTAGGTGATTCATTC+TGG | 0.269470 | 8_1:-79150477 | Msa1216970:intron |
| TCAGATGTGGATTATTCATT+AGG | 0.278418 | 8_1:+79151366 | None:intergenic |
| TTTCATGTGGGACTCTTTCA+TGG | 0.283903 | 8_1:-79150159 | Msa1216970:five_prime_UTR |
| TGTAAAGTAAGTCATAAATT+TGG | 0.284749 | 8_1:+79152665 | None:intergenic |
| GCCACTAGCTAGGACTTTAA+TGG | 0.294291 | 8_1:+79147204 | None:intergenic |
| TATGCAGAATACAACATCTT+TGG | 0.294839 | 8_1:-79151197 | Msa1216970:five_prime_UTR |
| ACATGTTGAATTCTGCATAT+TGG | 0.301217 | 8_1:+79147683 | None:intergenic |
| TCCACCAACATTTGGGAGTA+TGG | 0.305702 | 8_1:+79152579 | None:intergenic |
| AGCCACTAGCTATGGAAGTT+TGG | 0.307112 | 8_1:-79148297 | Msa1216970:exon |
| AGTTCGTTTGCAACGGTTAT+AGG | 0.307141 | 8_1:-79147577 | Msa1216970:CDS |
| GATCATGGTATCAGGGAAAA+AGG | 0.308534 | 8_1:-79151499 | Msa1216970:intron |
| ACTAATGCTTACCTGAATTC+TGG | 0.309508 | 8_1:+79148171 | None:intergenic |
| GTTAGTTAATACTGTAATAT+TGG | 0.329550 | 8_1:+79148243 | None:intergenic |
| TTCTGATTCGAACACTGTTT+TGG | 0.332851 | 8_1:+79147642 | None:intergenic |
| GGAAGATATCCACCAACATT+TGG | 0.335768 | 8_1:+79152571 | None:intergenic |
| TCGATGCAAACTACGGTATC+AGG | 0.337158 | 8_1:-79152183 | Msa1216970:five_prime_UTR |
| CAACACTTCACAATTTCAAT+TGG | 0.341212 | 8_1:-79152861 | Msa1216970:five_prime_UTR |
| ACTGTTACCTGATCTATAAT+TGG | 0.341265 | 8_1:+79152550 | None:intergenic |
| TGCTCAATTCCACGTCTATA+AGG | 0.342614 | 8_1:-79146975 | Msa1216970:CDS |
| CGGTTATAGGTAGGCTGAAC+AGG | 0.342860 | 8_1:-79147564 | Msa1216970:CDS |
| CCACTAGCTAGGACTTTAAT+GGG | 0.346166 | 8_1:+79147205 | None:intergenic |
| AAACATAAGCTCCAGAATTC+AGG | 0.350181 | 8_1:-79148182 | Msa1216970:intron |
| GCCCCTGGGTATGCTGCAAA+AGG | 0.359079 | 8_1:+79151170 | None:intergenic |
| AGATAATGAATTTGCTGAAA+TGG | 0.360031 | 8_1:-79150090 | Msa1216970:five_prime_UTR |
| GCAGTGTTGTTGATTATAGA+AGG | 0.360858 | 8_1:-79152989 | Msa1216970:five_prime_UTR |
| CCTCATTGCTTTGTGAAGAA+TGG | 0.369762 | 8_1:-79149918 | Msa1216970:five_prime_UTR |
| GCGTTTGCAGGACACATTCC+TGG | 0.372148 | 8_1:-79147296 | Msa1216970:intron |
| GTGGAACATATTTATATAAT+GGG | 0.373048 | 8_1:-79151335 | Msa1216970:five_prime_UTR |
| AAGATGTTGTATTCTGCATA+AGG | 0.374605 | 8_1:+79151200 | None:intergenic |
| TCAAAGAATTCCTTAGTGAT+AGG | 0.375854 | 8_1:+79150411 | None:intergenic |
| GTTTGATGACGAATTCTATT+CGG | 0.376055 | 8_1:-79150313 | Msa1216970:intron |
| AATTCTGCATATTGGTTTGA+AGG | 0.384962 | 8_1:+79147691 | None:intergenic |
| GCCACTAGCTATGGAAGTTT+GGG | 0.385918 | 8_1:-79148296 | Msa1216970:exon |
| ATTGTGTTTGATGCATCAAT+AGG | 0.393304 | 8_1:+79150435 | None:intergenic |
| ACATTCCTGGGAGAAATTCT+AGG | 0.398540 | 8_1:-79147283 | Msa1216970:CDS |
| GAAGATATCCACCAACATTT+GGG | 0.400853 | 8_1:+79152572 | None:intergenic |
| TGAAAATAACTCGTGATACT+TGG | 0.404022 | 8_1:-79150335 | Msa1216970:five_prime_UTR |
| ATGTGGGACTCTTTCATGGC+TGG | 0.407457 | 8_1:-79150155 | Msa1216970:five_prime_UTR |
| ACTCCATGTATTGGCATTGA+TGG | 0.408695 | 8_1:+79152708 | None:intergenic |
| GCGATCATTGTGAGTCCTAC+TGG | 0.410252 | 8_1:-79148833 | Msa1216970:five_prime_UTR |
| TTTGGGAGTATGGTACCATT+AGG | 0.411158 | 8_1:+79152589 | None:intergenic |
| TCAATAGGAACAAGGGTGAT+AGG | 0.411596 | 8_1:+79150450 | None:intergenic |
| GCTAGTGGCTGTCTAAGTTC+AGG | 0.412037 | 8_1:+79148310 | None:intergenic |
| AAGTCTGAAGCCAAAATTTG+AGG | 0.418280 | 8_1:-79147233 | Msa1216970:CDS |
| TTCTGACACTCTTTATGGTC+TGG | 0.429513 | 8_1:-79148630 | Msa1216970:five_prime_UTR |
| CGTTATGAATTTGCTTCAAA+CGG | 0.429659 | 8_1:+79147488 | None:intergenic |
| TGTTCAAGTAATCGACCTTA+AGG | 0.431076 | 8_1:-79149122 | Msa1216970:intron |
| GTTACTAAAATGCACCTTCT+CGG | 0.431338 | 8_1:+79148587 | None:intergenic |
| TTAAGGTCGATTACTTGAAC+AGG | 0.436542 | 8_1:+79149124 | None:intergenic |
| TTGCAGGAGGTTTATGTAGT+GGG | 0.440177 | 8_1:-79147763 | Msa1216970:intron |
| GAGCCATCAGATATTCCATA+TGG | 0.441356 | 8_1:+79150032 | None:intergenic |
| ACCTGCACTACTCCATGTAT+TGG | 0.446608 | 8_1:+79152699 | None:intergenic |
| ATTACTTCAAATAAACCATA+TGG | 0.452481 | 8_1:-79150047 | Msa1216970:five_prime_UTR |
| AAAACATCTCCTAGACCAAC+TGG | 0.452684 | 8_1:+79148743 | None:intergenic |
| CACTTCACAATTTCAATTGG+AGG | 0.455153 | 8_1:-79152858 | Msa1216970:intron |
| ATGTTGAAAGTTCACTTGAC+AGG | 0.460051 | 8_1:-79149546 | Msa1216970:five_prime_UTR |
| CCCAAGTTCAATCTTGAAAA+CGG | 0.460525 | 8_1:-79149981 | Msa1216970:five_prime_UTR |
| TAGGCCATTAAATAATGGAT+TGG | 0.462074 | 8_1:+79150010 | None:intergenic |
| TTACTAAAATGCACCTTCTC+GGG | 0.462449 | 8_1:+79148588 | None:intergenic |
| AATCAGGGAATGACAACAAC+AGG | 0.465338 | 8_1:-79152259 | Msa1216970:intron |
| ATTATTGGGTTTACTCATGA+TGG | 0.468597 | 8_1:+79150121 | None:intergenic |
| CAGACCATTCCTGTAGGGCT+TGG | 0.469809 | 8_1:-79152220 | Msa1216970:five_prime_UTR |
| TGCTTTGTGAAGAATGGAAA+AGG | 0.471454 | 8_1:-79149912 | Msa1216970:five_prime_UTR |
| ACCATTCCTGTAGGGCTTGG+AGG | 0.472739 | 8_1:-79152217 | Msa1216970:five_prime_UTR |
| TCTCCAACGACTGGGAGTAT+TGG | 0.475464 | 8_1:+79148701 | None:intergenic |
| CGTTTGCAGGACACATTCCT+GGG | 0.475578 | 8_1:-79147295 | Msa1216970:intron |
| CGCTTGGAAAACAGAACCTC+TGG | 0.476180 | 8_1:+79147529 | None:intergenic |
| GATGATATTGCTGTTGGAGT+TGG | 0.477895 | 8_1:-79152631 | Msa1216970:five_prime_UTR |
| TATGACTTACTTTACATGAT+GGG | 0.479443 | 8_1:-79152658 | Msa1216970:five_prime_UTR |
| CTTGAACAGGCACTTTAAGA+AGG | 0.479468 | 8_1:+79149137 | None:intergenic |
| AGATGTTGTATTCTGCATAA+GGG | 0.479524 | 8_1:+79151201 | None:intergenic |
| TTATGACTTACTTTACATGA+TGG | 0.484601 | 8_1:-79152659 | Msa1216970:five_prime_UTR |
| TGAGCTGTTGGTTGCTCTAG+TGG | 0.487703 | 8_1:+79151467 | None:intergenic |
| AATTCTAGGTGCAGTAGTCT+TGG | 0.493361 | 8_1:-79147269 | Msa1216970:CDS |
| ATTAACACTTCCTGAGCTGT+TGG | 0.495875 | 8_1:+79151455 | None:intergenic |
| AAGCCATTCCTCATGGGAGT+GGG | 0.497973 | 8_1:-79148664 | Msa1216970:five_prime_UTR |
| GATGATATACCAGTTGGTCT+AGG | 0.500674 | 8_1:-79148752 | Msa1216970:five_prime_UTR |
| AATTTGTATGTAAACAAGCT+TGG | 0.501659 | 8_1:-79147091 | Msa1216970:CDS |
| TACTTGCAATCTCCAACGAC+TGG | 0.503053 | 8_1:+79148692 | None:intergenic |
| ATATCTTCCAATTATAGATC+AGG | 0.504613 | 8_1:-79152557 | Msa1216970:intron |
| GCCAATACATGGAGTAGTGC+AGG | 0.505020 | 8_1:-79152700 | Msa1216970:five_prime_UTR |
| TTTGTAGTATGGAAACTGTA+TGG | 0.505590 | 8_1:+79149258 | None:intergenic |
| ATGTCCATGTCAAACACAAC+AGG | 0.506003 | 8_1:+79149190 | None:intergenic |
| CTAGTGGCTGTCTAAGTTCA+GGG | 0.506545 | 8_1:+79148311 | None:intergenic |
| CCCATCACAAACAGAGTTGT+GGG | 0.508036 | 8_1:+79151413 | None:intergenic |
| CTTGTTGAATATGACCACTA+TGG | 0.508643 | 8_1:+79149952 | None:intergenic |
| GTAAGATCAAACAATCCAAC+TGG | 0.508675 | 8_1:-79151305 | Msa1216970:five_prime_UTR |
| CTCAAGCAACCACAACAAGC+AGG | 0.509367 | 8_1:-79149295 | Msa1216970:five_prime_UTR |
| CAACAGGAGGATGTAGATAC+AGG | 0.509795 | 8_1:-79152243 | Msa1216970:five_prime_UTR |
| TTGTACCTCCCTGCTTGTTG+TGG | 0.513065 | 8_1:+79149286 | None:intergenic |
| GACGGTGGAATGCTACCTAA+TGG | 0.516306 | 8_1:-79152604 | Msa1216970:five_prime_UTR |
| GAATTTGCTTCAAACGGTGT+AGG | 0.518416 | 8_1:+79147494 | None:intergenic |
| CGGTGAAGTTTGGGGCTCCA+CGG | 0.519553 | 8_1:-79148345 | Msa1216970:five_prime_UTR |
| GGTGAAGTTTGGGGCTCCAC+GGG | 0.520276 | 8_1:-79148344 | Msa1216970:five_prime_UTR |
| AACCTTTGCCAAATTAGTCA+AGG | 0.520889 | 8_1:+79148216 | None:intergenic |
| GAATGGAAAAGGAAAATGTC+AGG | 0.523227 | 8_1:-79149901 | Msa1216970:intron |
| TGTAGCAACAAGTACCCTTA+CGG | 0.523414 | 8_1:+79149588 | None:intergenic |
| AAACGTCCTCCAAGCCCTAC+AGG | 0.525996 | 8_1:+79152211 | None:intergenic |
| ACTTAGACAGCCACTAGCTA+TGG | 0.526279 | 8_1:-79148305 | Msa1216970:exon |
| TGCAGGAGGTTTATGTAGTG+GGG | 0.528985 | 8_1:-79147762 | Msa1216970:intron |
| GCCATTCCTCATGGGAGTGG+GGG | 0.529965 | 8_1:-79148662 | Msa1216970:five_prime_UTR |
| TGACCATCAATGCCAATACA+TGG | 0.531055 | 8_1:-79152711 | Msa1216970:five_prime_UTR |
| CGTTTGCAACGGTTATAGGT+AGG | 0.532665 | 8_1:-79147573 | Msa1216970:CDS |
| CAGGAAAGCTTTCCTGCCAC+AGG | 0.538927 | 8_1:-79152164 | Msa1216970:intron |
| TTATGACATACTTCACATGA+TGG | 0.539063 | 8_1:-79148780 | Msa1216970:five_prime_UTR |
| GAACTTTCAACATCTCGGTT+AGG | 0.539182 | 8_1:+79149556 | None:intergenic |
| TATGTTAAAGCCATTCCTCA+TGG | 0.541178 | 8_1:-79148671 | Msa1216970:five_prime_UTR |
| TTGATTCAATGCCACTAGCT+AGG | 0.541440 | 8_1:+79147194 | None:intergenic |
| TCCCACAACTCTGTTTGTGA+TGG | 0.542981 | 8_1:-79151414 | Msa1216970:five_prime_UTR |
| GCTGCATTTGCCCATCCAGT+AGG | 0.543690 | 8_1:+79148818 | None:intergenic |
| TCTAACAGAGTTATTTCATG+TGG | 0.547832 | 8_1:-79150172 | Msa1216970:intron |
| GATATTGCTGTTGGAGTTGG+AGG | 0.550310 | 8_1:-79152628 | Msa1216970:five_prime_UTR |
| TCCTCCAAGCCCTACAGGAA+TGG | 0.550814 | 8_1:+79152216 | None:intergenic |
| AAACACAATACCTATCACTA+AGG | 0.550888 | 8_1:-79150421 | Msa1216970:five_prime_UTR |
| AAAGCCATTCCTCATGGGAG+TGG | 0.551840 | 8_1:-79148665 | Msa1216970:five_prime_UTR |
| GGGAGAGATGATATTGCTGT+TGG | 0.552131 | 8_1:-79152637 | Msa1216970:five_prime_UTR |
| CGTTTGAAGCAAATTCATAA+CGG | 0.553639 | 8_1:-79147487 | Msa1216970:CDS |
| CCCCTGGGTATGCTGCAAAA+GGG | 0.553739 | 8_1:+79151171 | None:intergenic |
| GGTAGTATTATACCTGTGGC+AGG | 0.556015 | 8_1:+79152152 | None:intergenic |
| CAAGTGAACTTTCAACATCT+CGG | 0.556193 | 8_1:+79149551 | None:intergenic |
| TCATTGTGAGTCCTACTGGA+TGG | 0.557672 | 8_1:-79148829 | Msa1216970:five_prime_UTR |
| ACCCTTGACTAATTTGGCAA+AGG | 0.563639 | 8_1:-79148218 | Msa1216970:CDS |
| GCAGGAGGTTTATGTAGTGG+GGG | 0.564514 | 8_1:-79147761 | Msa1216970:intron |
| GTTGCAGGAGGTTTATGTAG+TGG | 0.564553 | 8_1:-79147764 | Msa1216970:intron |
| TGCAGTAGTCTTGGCTGAGA+AGG | 0.564692 | 8_1:-79147260 | Msa1216970:CDS |
| ATCTACCTCGCAGCCCGAGA+AGG | 0.565466 | 8_1:-79148601 | Msa1216970:intron |
| CAGAATATTAAGCAATGTTG+AGG | 0.565594 | 8_1:-79147128 | Msa1216970:CDS |
| TAGGCTTGACAATAGACGCT+TGG | 0.565621 | 8_1:+79147513 | None:intergenic |
| TCCCATCACAAACAGAGTTG+TGG | 0.566807 | 8_1:+79151412 | None:intergenic |
| CCATTCTTCACAAAGCAATG+AGG | 0.568005 | 8_1:+79149918 | None:intergenic |
| TACGCGGTGAAGACTCCGTA+AGG | 0.568105 | 8_1:-79149603 | Msa1216970:five_prime_UTR |
| ATGACTTACTTTACATGATG+GGG | 0.568266 | 8_1:-79152657 | Msa1216970:five_prime_UTR |
| CATATTTATATAATGGGTGG+AGG | 0.569513 | 8_1:-79151329 | Msa1216970:five_prime_UTR |
| AAACCATATGGAATATCTGA+TGG | 0.570401 | 8_1:-79150035 | Msa1216970:five_prime_UTR |
| CAGTATCAGTCAGCTAAGGT+AGG | 0.570640 | 8_1:-79147064 | Msa1216970:CDS |
| TTGATTATAGAAGGTGTGAT+CGG | 0.573603 | 8_1:-79152980 | Msa1216970:five_prime_UTR |
| ACCTTTGCCAAATTAGTCAA+GGG | 0.574002 | 8_1:+79148217 | None:intergenic |
| ACTAGAGCAACCAACAGCTC+AGG | 0.574162 | 8_1:-79151465 | Msa1216970:five_prime_UTR |
| CCCACAACTCTGTTTGTGAT+GGG | 0.576625 | 8_1:-79151413 | Msa1216970:five_prime_UTR |
| TAGAGTGAGTTCGTTTGCAA+CGG | 0.577173 | 8_1:-79147584 | Msa1216970:CDS |
| CATTGTGAGTCCTACTGGAT+GGG | 0.577818 | 8_1:-79148828 | Msa1216970:five_prime_UTR |
| ATAGGATGGTTACACAAAAG+AGG | 0.578087 | 8_1:-79149626 | Msa1216970:intron |
| AATCTGTAAACAAATTTCCA+CGG | 0.580305 | 8_1:+79151234 | None:intergenic |
| ACCATACTCCCAAATGTTGG+TGG | 0.580841 | 8_1:-79152580 | Msa1216970:five_prime_UTR |
| TTAGATGTCGATGCAAACTA+CGG | 0.582555 | 8_1:-79152190 | Msa1216970:five_prime_UTR |
| CTAACAGAGTTATTTCATGT+GGG | 0.582853 | 8_1:-79150171 | Msa1216970:intron |
| TATGACATACTTCACATGAT+GGG | 0.584376 | 8_1:-79148779 | Msa1216970:five_prime_UTR |
| GATCCAATACTCCCAGTCGT+TGG | 0.585555 | 8_1:-79148704 | Msa1216970:five_prime_UTR |
| GATCGGAGTAGCAGCTGTAG+TGG | 0.587078 | 8_1:-79152963 | Msa1216970:five_prime_UTR |
| CCATTCCTCATGGGAGTGGG+GGG | 0.589090 | 8_1:-79148661 | Msa1216970:five_prime_UTR |
| AAAGAGTCAAGACACATATG+AGG | 0.592475 | 8_1:-79150379 | Msa1216970:five_prime_UTR |
| ATGTTAAAGCCATTCCTCAT+GGG | 0.595290 | 8_1:-79148670 | Msa1216970:five_prime_UTR |
| GAACATATTTATATAATGGG+TGG | 0.596251 | 8_1:-79151332 | Msa1216970:five_prime_UTR |
| TGTTGAAAGTTCACTTGACA+GGG | 0.599064 | 8_1:-79149545 | Msa1216970:five_prime_UTR |
| ACAGGCAGACCATTCCTGTA+GGG | 0.604781 | 8_1:-79152225 | Msa1216970:five_prime_UTR |
| GAAAACGGTGGTGTCCATAG+TGG | 0.605592 | 8_1:-79149966 | Msa1216970:five_prime_UTR |
| GCTGTTGGAGTTGGAGGAGA+CGG | 0.607819 | 8_1:-79152622 | Msa1216970:five_prime_UTR |
| CCCATTAAAGTCCTAGCTAG+TGG | 0.608174 | 8_1:-79147205 | Msa1216970:CDS |
| CTGCACCTAGAATTTCTCCC+AGG | 0.612278 | 8_1:+79147278 | None:intergenic |
| GTGAAGTGTTGAGCTTGAGA+AGG | 0.612698 | 8_1:+79152873 | None:intergenic |
| AGTGGCATTGAATCAAGTGA+TGG | 0.624374 | 8_1:-79147187 | Msa1216970:CDS |
| AATATTACAGTATTAACTAA+CGG | 0.625572 | 8_1:-79148241 | Msa1216970:CDS |
| GGTCGTGATGATATACCAGT+TGG | 0.625658 | 8_1:-79148758 | Msa1216970:five_prime_UTR |
| ACTTGCAATCTCCAACGACT+GGG | 0.629842 | 8_1:+79148693 | None:intergenic |
| TTAAAGAACAGACAAGAATG+TGG | 0.629966 | 8_1:-79147036 | Msa1216970:CDS |
| TTGATGCATCAATAGGAACA+AGG | 0.630448 | 8_1:+79150442 | None:intergenic |
| GGTACCATACTCCCAAATGT+TGG | 0.630506 | 8_1:-79152583 | Msa1216970:five_prime_UTR |
| TGATCAGTATCAGTCAGCTA+AGG | 0.632406 | 8_1:-79147068 | Msa1216970:CDS |
| TCCCAAACTTCCATAGCTAG+TGG | 0.635202 | 8_1:+79148295 | None:intergenic |
| TCAAGCAACCACAACAAGCA+GGG | 0.636738 | 8_1:-79149294 | Msa1216970:five_prime_UTR |
| TACAGGCAGACCATTCCTGT+AGG | 0.639391 | 8_1:-79152226 | Msa1216970:five_prime_UTR |
| GAAAGAAACTAAAACAAGCA+CGG | 0.641734 | 8_1:+79153059 | None:intergenic |
| TCAGGGTGATCTGTATCCCG+TGG | 0.642201 | 8_1:+79148328 | None:intergenic |
| CATAGTGGTCATATTCAACA+AGG | 0.643535 | 8_1:-79149951 | Msa1216970:five_prime_UTR |
| TCATAACGGATATCACCATA+CGG | 0.644305 | 8_1:-79147473 | Msa1216970:intron |
| AGTAAACCCAATAATCACAA+AGG | 0.646458 | 8_1:-79150113 | Msa1216970:five_prime_UTR |
| TTTGACATGGACATGAGTGC+AGG | 0.649664 | 8_1:-79149181 | Msa1216970:five_prime_UTR |
| GATAAAACGCCTTATAGACG+TGG | 0.651685 | 8_1:+79146966 | None:intergenic |
| ATGCACCTTCTCGGGCTGCG+AGG | 0.651691 | 8_1:+79148596 | None:intergenic |
| CAGGAGGTTTATGTAGTGGG+GGG | 0.652107 | 8_1:-79147760 | Msa1216970:CDS |
| GGGTTTACTCATGATGGACA+CGG | 0.655485 | 8_1:+79150127 | None:intergenic |
| GAGATCGAATAATGCTGCCG+AGG | 0.656728 | 8_1:-79153030 | Msa1216970:five_prime_UTR |
| AATACTGTAATATTGGACGC+TGG | 0.657220 | 8_1:+79148250 | None:intergenic |
| CATAAAGAGTGTCAGAATCG+AGG | 0.658776 | 8_1:+79148636 | None:intergenic |
| TGATGCATCAATAGGAACAA+GGG | 0.660215 | 8_1:+79150443 | None:intergenic |
| GACTTTCATAATAAAAGACT+AGG | 0.660793 | 8_1:-79149217 | Msa1216970:five_prime_UTR |
| AGCAGGAATACAGAAGACAA+AGG | 0.660955 | 8_1:-79147730 | Msa1216970:CDS |
| CCTCAGCAGTGTGGTGACCG+TGG | 0.661977 | 8_1:-79151251 | Msa1216970:five_prime_UTR |
| AAAACCTGTTGTGTTTGACA+TGG | 0.662500 | 8_1:-79149194 | Msa1216970:five_prime_UTR |
| TCACTAGGCTTATCATCACG+AGG | 0.665115 | 8_1:+79147007 | None:intergenic |
| CCACGGTCACCACACTGCTG+AGG | 0.665981 | 8_1:+79151251 | None:intergenic |
| CAGGGAATGACAACAACAGG+AGG | 0.676364 | 8_1:-79152256 | Msa1216970:five_prime_UTR |
| GTTGGAGTTGGAGGAGACGG+TGG | 0.676919 | 8_1:-79152619 | Msa1216970:five_prime_UTR |
| GAGCAGAGCGAATAAATCGT+CGG | 0.685611 | 8_1:+79152898 | None:intergenic |
| AAGTTCAATCTTGAAAACGG+TGG | 0.694006 | 8_1:-79149978 | Msa1216970:five_prime_UTR |
| ACTACAGCTGCAGCTAACCT+CGG | 0.701795 | 8_1:+79153013 | None:intergenic |
| ACTCTACGCTGAATTCTCAG+TGG | 0.706503 | 8_1:+79147601 | None:intergenic |
| GTATCAACAACAATCCGATG+AGG | 0.708134 | 8_1:+79152932 | None:intergenic |
| TCTTGTGTACCTCAGCAGTG+TGG | 0.732106 | 8_1:-79151260 | Msa1216970:five_prime_UTR |
| ACGCGGTGAAGACTCCGTAA+GGG | 0.734334 | 8_1:-79149602 | Msa1216970:five_prime_UTR |
| AGCAACCACAACAAGCAGGG+AGG | 0.741845 | 8_1:-79149291 | Msa1216970:five_prime_UTR |
| GGTTACACAAAAGAGGTACG+CGG | 0.780387 | 8_1:-79149619 | Msa1216970:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAATATATATAAAATTC+AGG | - | chr8_1:79148071-79148090 | Msa1216970:intron | 10.0% |
| !!! | ATAAATTTTCAATAACATAT+AGG | + | chr8_1:79149226-79149245 | None:intergenic | 10.0% |
| !!! | TTCTTTTTTCTTTTTAATGT+GGG | + | chr8_1:79147546-79147565 | None:intergenic | 15.0% |
| !! | TCAATAATAATTCTTGTTAA+TGG | - | chr8_1:79147716-79147735 | Msa1216970:CDS | 15.0% |
| !!! | TTTTTTCATACAATATGATT+AGG | - | chr8_1:79147971-79147990 | Msa1216970:intron | 15.0% |
| !!! | TTAAACCTTATTTATATTGT+TGG | - | chr8_1:79148114-79148133 | Msa1216970:intron | 15.0% |
| !!! | TGATGGATTTTTATTTATAA+AGG | - | chr8_1:79149807-79149826 | Msa1216970:intron | 15.0% |
| !! | TGCATTATAAATTATTGAAA+CGG | - | chr8_1:79151501-79151520 | Msa1216970:intron | 15.0% |
| !! | AATATTACAGTATTAACTAA+CGG | - | chr8_1:79151786-79151805 | Msa1216970:intron | 15.0% |
| !! | AAAAACACTTAAATTGAATA+AGG | - | chr8_1:79151976-79151995 | Msa1216970:intron | 15.0% |
| !! | TAATTAACTCTAATTTATGT+CGG | + | chr8_1:79152669-79152688 | None:intergenic | 15.0% |
| !!! | TACTATTTTTTGAACGATTT+TGG | - | chr8_1:79147254-79147273 | Msa1216970:CDS | 20.0% |
| !! | TGTAAAGTAAGTCATAAATT+TGG | + | chr8_1:79147365-79147384 | None:intergenic | 20.0% |
| !!! | CTTCTTTTTTCTTTTTAATG+TGG | + | chr8_1:79147547-79147566 | None:intergenic | 20.0% |
| !! | ATGTTGAAATATAATGTGAT+TGG | + | chr8_1:79147944-79147963 | None:intergenic | 20.0% |
| !!! | TGAATCTCTGAAAAAATTTA+TGG | + | chr8_1:79148053-79148072 | None:intergenic | 20.0% |
| !!! | ATATATAAAATTCAGGTTCA+AGG | - | chr8_1:79148078-79148097 | Msa1216970:intron | 20.0% |
| !! | ATAAGGTTTAACTATATCAA+AGG | + | chr8_1:79148105-79148124 | None:intergenic | 20.0% |
| !! | TTGTTCCAACAATATAAATA+AGG | + | chr8_1:79148122-79148141 | None:intergenic | 20.0% |
| !! | TGTGGAACATATTTATATAA+TGG | - | chr8_1:79148691-79148710 | Msa1216970:five_prime_UTR | 20.0% |
| !! | GTGGAACATATTTATATAAT+GGG | - | chr8_1:79148692-79148711 | Msa1216970:five_prime_UTR | 20.0% |
| !! | AATAATTAAATTCCAAGCAT+GGG | + | chr8_1:79149341-79149360 | None:intergenic | 20.0% |
| !! | AAATAATTAAATTCCAAGCA+TGG | + | chr8_1:79149342-79149361 | None:intergenic | 20.0% |
| !!! | ATAAAACGATGTTTACTTTT+CGG | + | chr8_1:79149533-79149552 | None:intergenic | 20.0% |
| !! | AAGTAGTAACTTAATATCAT+AGG | + | chr8_1:79149773-79149792 | None:intergenic | 20.0% |
| !! | ATTACTTCAAATAAACCATA+TGG | - | chr8_1:79149980-79149999 | Msa1216970:five_prime_UTR | 20.0% |
| !!! | AATTCTATTTTTTCTAGAAG+TGG | - | chr8_1:79150345-79150364 | Msa1216970:five_prime_UTR | 20.0% |
| !!! | TTAAATGTGTTCACTTTTTT+TGG | - | chr8_1:79150522-79150541 | Msa1216970:intron | 20.0% |
| !!! | TAAATGTGTTCACTTTTTTT+GGG | - | chr8_1:79150523-79150542 | Msa1216970:intron | 20.0% |
| !! | AAGAAAAATACATACTTACA+TGG | - | chr8_1:79150583-79150602 | Msa1216970:intron | 20.0% |
| !!! | TGAATTTGACTTTGATATTT+TGG | - | chr8_1:79150696-79150715 | Msa1216970:intron | 20.0% |
| !!! | TAAGTTACTTTTTTGTAGTA+TGG | + | chr8_1:79150783-79150802 | None:intergenic | 20.0% |
| !! | AGAAAAATAAGAATACCTTA+AGG | + | chr8_1:79150923-79150942 | None:intergenic | 20.0% |
| !! | AGTAATTGAAAGAAACAATT+AGG | + | chr8_1:79150948-79150967 | None:intergenic | 20.0% |
| !! | AAAAGTAGAAGTTTCTAATT+GGG | + | chr8_1:79151050-79151069 | None:intergenic | 20.0% |
| !! | TAAAAGTAGAAGTTTCTAAT+TGG | + | chr8_1:79151051-79151070 | None:intergenic | 20.0% |
| !! | GTTAGTTAATACTGTAATAT+TGG | + | chr8_1:79151787-79151806 | None:intergenic | 20.0% |
| !!! | CAATGACAATAAACTTTTAA+TGG | + | chr8_1:79151938-79151957 | None:intergenic | 20.0% |
| !!! | TGAAAAATTTCAATCGTTTT+TGG | + | chr8_1:79152059-79152078 | None:intergenic | 20.0% |
| !!! | TGTGTTATTAAGCATTTTTT+AGG | - | chr8_1:79152204-79152223 | Msa1216970:five_prime_UTR | 20.0% |
| !! | TTGAGCTAGAAAATTAATTA+TGG | + | chr8_1:79152593-79152612 | None:intergenic | 20.0% |
| !! | ATACTTATGTTTAGATACAA+AGG | - | chr8_1:79152636-79152655 | Msa1216970:five_prime_UTR | 20.0% |
| ! | AATCGTTCAAAAAATAGTAC+AGG | + | chr8_1:79147253-79147272 | None:intergenic | 25.0% |
| ! | CATAAAGGAGAAAAAATAAG+AGG | + | chr8_1:79147280-79147299 | None:intergenic | 25.0% |
| ! | TTATGACTTACTTTACATGA+TGG | - | chr8_1:79147368-79147387 | Msa1216970:intron | 25.0% |
| ! | TATGACTTACTTTACATGAT+GGG | - | chr8_1:79147369-79147388 | Msa1216970:intron | 25.0% |
| ! | ATATCTTCCAATTATAGATC+AGG | - | chr8_1:79147470-79147489 | Msa1216970:intron | 25.0% |
| ! | AAATGTCTTATGACTCAAAT+GGG | + | chr8_1:79147647-79147666 | None:intergenic | 25.0% |
| ! | AAAATGTCTTATGACTCAAA+TGG | + | chr8_1:79147648-79147667 | None:intergenic | 25.0% |
| ! | AAGTAAATAAATGCAACAGT+TGG | - | chr8_1:79147672-79147691 | Msa1216970:CDS | 25.0% |
| ! | AGTAAATAAATGCAACAGTT+GGG | - | chr8_1:79147673-79147692 | Msa1216970:CDS | 25.0% |
| !!! | GTGATAACGTTTTTTAGTTT+TGG | + | chr8_1:79148320-79148339 | None:intergenic | 25.0% |
| ! | TACTCTATTCTTAGCATATA+TGG | - | chr8_1:79148431-79148450 | Msa1216970:intron | 25.0% |
| !!! | TTGCTATTTCAACTTATTTC+TGG | - | chr8_1:79148454-79148473 | Msa1216970:intron | 25.0% |
| !!! | TTAATTGAAAAAGTATCTGC+AGG | - | chr8_1:79148590-79148609 | Msa1216970:intron | 25.0% |
| !! | GAACATATTTATATAATGGG+TGG | - | chr8_1:79148695-79148714 | Msa1216970:five_prime_UTR | 25.0% |
| ! | AATCTGTAAACAAATTTCCA+CGG | + | chr8_1:79148796-79148815 | None:intergenic | 25.0% |
| ! | TCTGTTATTGTATGTTGTTA+TGG | - | chr8_1:79149193-79149212 | Msa1216970:five_prime_UTR | 25.0% |
| ! | CTGTTATTGTATGTTGTTAT+GGG | - | chr8_1:79149194-79149213 | Msa1216970:five_prime_UTR | 25.0% |
| !! | GGGTTATTAGAGTAAATTTT+GGG | + | chr8_1:79149278-79149297 | None:intergenic | 25.0% |
| !! | AGGGTTATTAGAGTAAATTT+TGG | + | chr8_1:79149279-79149298 | None:intergenic | 25.0% |
| ! | CAAAAATATACATAGCGTTA+TGG | - | chr8_1:79149491-79149510 | Msa1216970:intron | 25.0% |
| !! | GTAAACATCGTTTTATATGT+AGG | - | chr8_1:79149537-79149556 | Msa1216970:five_prime_UTR | 25.0% |
| ! | TTATCTCCTTTGTGATTATT+GGG | + | chr8_1:79149923-79149942 | None:intergenic | 25.0% |
| ! | ATTATCTCCTTTGTGATTAT+TGG | + | chr8_1:79149924-79149943 | None:intergenic | 25.0% |
| !!! | AGATAATGAATTTGCTGAAA+TGG | - | chr8_1:79149937-79149956 | Msa1216970:five_prime_UTR | 25.0% |
| !! | ACTTTTAGGCCATTAAATAA+TGG | + | chr8_1:79150025-79150044 | None:intergenic | 25.0% |
| ! | TAGAATTAGTAGCCAAAATT+GGG | + | chr8_1:79150332-79150351 | None:intergenic | 25.0% |
| ! | ATAGAATTAGTAGCCAAAAT+TGG | + | chr8_1:79150333-79150352 | None:intergenic | 25.0% |
| !!! | AAATGTGTTCACTTTTTTTG+GGG | - | chr8_1:79150524-79150543 | Msa1216970:intron | 25.0% |
| !!! | CTATCTTTTTAAGAATCCAA+TGG | + | chr8_1:79150662-79150681 | None:intergenic | 25.0% |
| !!! | ATTTGACTTTGATATTTTGG+TGG | - | chr8_1:79150699-79150718 | Msa1216970:intron | 25.0% |
| !!! | TTTGACTTTGATATTTTGGT+GGG | - | chr8_1:79150700-79150719 | Msa1216970:intron | 25.0% |
| !! | AGTCTTTTATTATGAAAGTC+TGG | + | chr8_1:79150810-79150829 | None:intergenic | 25.0% |
| ! | GACTTTCATAATAAAAGACT+AGG | - | chr8_1:79150810-79150829 | Msa1216970:intron | 25.0% |
| ! | AATATTATCACTTCCAAGAA+AGG | - | chr8_1:79150985-79151004 | Msa1216970:intron | 25.0% |
| !! | TATCAAGAGTTTTTGCAATT+GGG | + | chr8_1:79151020-79151039 | None:intergenic | 25.0% |
| ! | CAATATAGCCACATTTAATT+CGG | - | chr8_1:79151148-79151167 | Msa1216970:intron | 25.0% |
| ! | AATATAGCCACATTTAATTC+GGG | - | chr8_1:79151149-79151168 | Msa1216970:intron | 25.0% |
| ! | GATACACTAAGAATTATTTC+AGG | - | chr8_1:79151643-79151662 | Msa1216970:intron | 25.0% |
| ! | AACATCAATGAAATTTCTGT+AGG | - | chr8_1:79152102-79152121 | Msa1216970:intron | 25.0% |
| ! | ACATCAATGAAATTTCTGTA+GGG | - | chr8_1:79152103-79152122 | Msa1216970:intron | 25.0% |
| ! | AAAAAATTCCAAAATGTTGC+AGG | - | chr8_1:79152248-79152267 | Msa1216970:five_prime_UTR | 25.0% |
| ! | AATTTGTATGTAAACAAGCT+TGG | - | chr8_1:79152936-79152955 | Msa1216970:five_prime_UTR | 25.0% |
| GAAAGAAACTAAAACAAGCA+CGG | + | chr8_1:79146971-79146990 | None:intergenic | 30.0% | |
| ! | TTGATTATAGAAGGTGTGAT+CGG | - | chr8_1:79147047-79147066 | Msa1216970:CDS | 30.0% |
| CAACACTTCACAATTTCAAT+TGG | - | chr8_1:79147166-79147185 | Msa1216970:CDS | 30.0% | |
| AAATCACACATTTGTGACAT+TGG | + | chr8_1:79147227-79147246 | None:intergenic | 30.0% | |
| ! | ATGTCACAAATGTGTGATTT+TGG | - | chr8_1:79147227-79147246 | Msa1216970:CDS | 30.0% |
| ATGACTTACTTTACATGATG+GGG | - | chr8_1:79147370-79147389 | Msa1216970:intron | 30.0% | |
| ACTGTTACCTGATCTATAAT+TGG | + | chr8_1:79147480-79147499 | None:intergenic | 30.0% | |
| ! | GAAAAGACTAGTTCATTAGT+CGG | + | chr8_1:79147603-79147622 | None:intergenic | 30.0% |
| AAAAAAAGGCCTATGTAAGT+GGG | + | chr8_1:79148020-79148039 | None:intergenic | 30.0% | |
| TAAAAAAAGGCCTATGTAAG+TGG | + | chr8_1:79148021-79148040 | None:intergenic | 30.0% | |
| !! | ATGGTACTTGCTCTAAAAAA+AGG | + | chr8_1:79148034-79148053 | None:intergenic | 30.0% |
| ! | TACTTTGAAAGAGAAAAGAG+AGG | - | chr8_1:79148181-79148200 | Msa1216970:intron | 30.0% |
| CTAATTTGATCATGGTATCA+GGG | - | chr8_1:79148521-79148540 | Msa1216970:intron | 30.0% | |
| ! | TCAGATGTGGATTATTCATT+AGG | + | chr8_1:79148664-79148683 | None:intergenic | 30.0% |
| !! | CATATTTATATAATGGGTGG+AGG | - | chr8_1:79148698-79148717 | Msa1216970:five_prime_UTR | 30.0% |
| !! | ACACAAGATGAAGCATTTTT+AGG | + | chr8_1:79148755-79148774 | None:intergenic | 30.0% |
| AGATGTTGTATTCTGCATAA+GGG | + | chr8_1:79148829-79148848 | None:intergenic | 30.0% | |
| AAGATGTTGTATTCTGCATA+AGG | + | chr8_1:79148830-79148849 | None:intergenic | 30.0% | |
| TATGCAGAATACAACATCTT+TGG | - | chr8_1:79148830-79148849 | Msa1216970:five_prime_UTR | 30.0% | |
| CTAAAAAAATCAGCTTGGTT+TGG | + | chr8_1:79148918-79148937 | None:intergenic | 30.0% | |
| !!! | CAAACCAAGCTGATTTTTTT+AGG | - | chr8_1:79148916-79148935 | Msa1216970:intron | 30.0% |
| AAGAAAGGAAAAGTCTTTGT+AGG | - | chr8_1:79148946-79148965 | Msa1216970:intron | 30.0% | |
| !! | TAGTTCCTTTTCTTGTTGTA+TGG | - | chr8_1:79149148-79149167 | Msa1216970:five_prime_UTR | 30.0% |
| !! | AGTTCCTTTTCTTGTTGTAT+GGG | - | chr8_1:79149149-79149168 | Msa1216970:five_prime_UTR | 30.0% |
| AACAACATACAATAACAGAG+TGG | + | chr8_1:79149192-79149211 | None:intergenic | 30.0% | |
| AATAAAGAATGTGTATGACC+TGG | + | chr8_1:79149417-79149436 | None:intergenic | 30.0% | |
| TATATGTAGGTGATTCATTC+TGG | - | chr8_1:79149550-79149569 | Msa1216970:five_prime_UTR | 30.0% | |
| ATTGTGTTTGATGCATCAAT+AGG | + | chr8_1:79149595-79149614 | None:intergenic | 30.0% | |
| AAACACAATACCTATCACTA+AGG | - | chr8_1:79149606-79149625 | Msa1216970:five_prime_UTR | 30.0% | |
| TCAAAGAATTCCTTAGTGAT+AGG | + | chr8_1:79149619-79149638 | None:intergenic | 30.0% | |
| !! | AGTATCACGAGTTATTTTCA+AGG | + | chr8_1:79149692-79149711 | None:intergenic | 30.0% |
| TGAAAATAACTCGTGATACT+TGG | - | chr8_1:79149692-79149711 | Msa1216970:intron | 30.0% | |
| !! | GTTTGATGACGAATTCTATT+CGG | - | chr8_1:79149714-79149733 | Msa1216970:intron | 30.0% |
| CTTAAGTGTTACATGTTTGA+TGG | - | chr8_1:79149790-79149809 | Msa1216970:intron | 30.0% | |
| ! | TCTAACAGAGTTATTTCATG+TGG | - | chr8_1:79149855-79149874 | Msa1216970:intron | 30.0% |
| ! | CTAACAGAGTTATTTCATGT+GGG | - | chr8_1:79149856-79149875 | Msa1216970:intron | 30.0% |
| ATTATTGGGTTTACTCATGA+TGG | + | chr8_1:79149909-79149928 | None:intergenic | 30.0% | |
| AGTAAACCCAATAATCACAA+AGG | - | chr8_1:79149914-79149933 | Msa1216970:five_prime_UTR | 30.0% | |
| AAACCATATGGAATATCTGA+TGG | - | chr8_1:79149992-79150011 | Msa1216970:five_prime_UTR | 30.0% | |
| !! | TAGGCCATTAAATAATGGAT+TGG | + | chr8_1:79150020-79150039 | None:intergenic | 30.0% |
| ! | AGGTAGTTGTTTGTTCTTTT+AGG | - | chr8_1:79150146-79150165 | Msa1216970:five_prime_UTR | 30.0% |
| !!! | TTTTTTTCAGTCCCCAATTT+TGG | - | chr8_1:79150317-79150336 | Msa1216970:five_prime_UTR | 30.0% |
| AGAATTAGTAGCCAAAATTG+GGG | + | chr8_1:79150331-79150350 | None:intergenic | 30.0% | |
| CATTGTAACATGTGTTCTAT+AGG | - | chr8_1:79150383-79150402 | Msa1216970:five_prime_UTR | 30.0% | |
| ATTTATGATCTGACTTCCAT+TGG | - | chr8_1:79150643-79150662 | Msa1216970:intron | 30.0% | |
| TTTGTAGTATGGAAACTGTA+TGG | + | chr8_1:79150772-79150791 | None:intergenic | 30.0% | |
| ! | CTATCAAGAGTTTTTGCAAT+TGG | + | chr8_1:79151021-79151040 | None:intergenic | 30.0% |
| !! | TTTCATGCAAATTTGGTGTT+AGG | - | chr8_1:79151172-79151191 | Msa1216970:intron | 30.0% |
| TTATGACATACTTCACATGA+TGG | - | chr8_1:79151247-79151266 | Msa1216970:five_prime_UTR | 30.0% | |
| TATGACATACTTCACATGAT+GGG | - | chr8_1:79151248-79151267 | Msa1216970:five_prime_UTR | 30.0% | |
| !! | AGATGTTTTTGCAATGAATC+AGG | - | chr8_1:79151298-79151317 | Msa1216970:five_prime_UTR | 30.0% |
| TTAAGAGAAATAGTTAGGCA+CGG | + | chr8_1:79151468-79151487 | None:intergenic | 30.0% | |
| CTAGCTTAAGAGAAATAGTT+AGG | + | chr8_1:79151473-79151492 | None:intergenic | 30.0% | |
| ATAGAATGTGCATGAAAACA+CGG | + | chr8_1:79151600-79151619 | None:intergenic | 30.0% | |
| CAGGTATAACTGAGAAAAAT+CGG | - | chr8_1:79151662-79151681 | Msa1216970:intron | 30.0% | |
| !! | AATTCTGCATATTGGTTTGA+AGG | + | chr8_1:79152339-79152358 | None:intergenic | 30.0% |
| ACATGTTGAATTCTGCATAT+TGG | + | chr8_1:79152347-79152366 | None:intergenic | 30.0% | |
| ! | CGTTATGAATTTGCTTCAAA+CGG | + | chr8_1:79152542-79152561 | None:intergenic | 30.0% |
| ! | CGTTTGAAGCAAATTCATAA+CGG | - | chr8_1:79152540-79152559 | Msa1216970:intron | 30.0% |
| GGATAAAAACTTATACCGTA+TGG | + | chr8_1:79152572-79152591 | None:intergenic | 30.0% | |
| ! | TGAATCAAGTGATGGAAAAA+TGG | - | chr8_1:79152848-79152867 | Msa1216970:intron | 30.0% |
| CAGAATATTAAGCAATGTTG+AGG | - | chr8_1:79152899-79152918 | Msa1216970:five_prime_UTR | 30.0% | |
| TTAAAGAACAGACAAGAATG+TGG | - | chr8_1:79152991-79153010 | Msa1216970:five_prime_UTR | 30.0% | |
| ! | GCAGTGTTGTTGATTATAGA+AGG | - | chr8_1:79147038-79147057 | Msa1216970:CDS | 35.0% |
| CACTTCACAATTTCAATTGG+AGG | - | chr8_1:79147169-79147188 | Msa1216970:CDS | 35.0% | |
| GAAGATATCCACCAACATTT+GGG | + | chr8_1:79147458-79147477 | None:intergenic | 35.0% | |
| GACTCATAACACAATATTCG+GGG | + | chr8_1:79147524-79147543 | None:intergenic | 35.0% | |
| GGACTCATAACACAATATTC+GGG | + | chr8_1:79147525-79147544 | None:intergenic | 35.0% | |
| GGGACTCATAACACAATATT+CGG | + | chr8_1:79147526-79147545 | None:intergenic | 35.0% | |
| TTAGATGTCGATGCAAACTA+CGG | - | chr8_1:79147837-79147856 | Msa1216970:intron | 35.0% | |
| ACATGGTAGTATTATACCTG+TGG | + | chr8_1:79147882-79147901 | None:intergenic | 35.0% | |
| ATATTGTTGGAACAAGCGTT+TGG | - | chr8_1:79148127-79148146 | Msa1216970:intron | 35.0% | |
| TCACTAACTAACTTCCCTAA+CGG | - | chr8_1:79148336-79148355 | Msa1216970:five_prime_UTR | 35.0% | |
| !! | GTAGCTTGCTAATTTGATCA+TGG | - | chr8_1:79148513-79148532 | Msa1216970:intron | 35.0% |
| GCTAATTTGATCATGGTATC+AGG | - | chr8_1:79148520-79148539 | Msa1216970:intron | 35.0% | |
| TCCACATCTGAAGAAAAATG+TGG | - | chr8_1:79148673-79148692 | Msa1216970:five_prime_UTR | 35.0% | |
| ! | TCCACATTTTTCTTCAGATG+TGG | + | chr8_1:79148677-79148696 | None:intergenic | 35.0% |
| GTAAGATCAAACAATCCAAC+TGG | - | chr8_1:79148722-79148741 | Msa1216970:five_prime_UTR | 35.0% | |
| !!! | TTTTTAGGACAACAACCAGT+TGG | + | chr8_1:79148740-79148759 | None:intergenic | 35.0% |
| TGCACCTAAAAAAATCAGCT+TGG | + | chr8_1:79148923-79148942 | None:intergenic | 35.0% | |
| !!! | AAGCTGATTTTTTTAGGTGC+AGG | - | chr8_1:79148922-79148941 | Msa1216970:intron | 35.0% |
| !!! | TTTTTAGGTGCAGGTAAGAA+AGG | - | chr8_1:79148931-79148950 | Msa1216970:intron | 35.0% |
| !! | GTTCCTTTTCTTGTTGTATG+GGG | - | chr8_1:79149150-79149169 | Msa1216970:five_prime_UTR | 35.0% |
| !! | TTCCTTTTCTTGTTGTATGG+GGG | - | chr8_1:79149151-79149170 | Msa1216970:five_prime_UTR | 35.0% |
| ATTGTATGTTGTTATGGGCT+TGG | - | chr8_1:79149199-79149218 | Msa1216970:five_prime_UTR | 35.0% | |
| TTGTATGTTGTTATGGGCTT+GGG | - | chr8_1:79149200-79149219 | Msa1216970:five_prime_UTR | 35.0% | |
| TCGTCAGATAACTTGAATCA+GGG | + | chr8_1:79149298-79149317 | None:intergenic | 35.0% | |
| ATCGTCAGATAACTTGAATC+AGG | + | chr8_1:79149299-79149318 | None:intergenic | 35.0% | |
| AAAATGACTGTGCAACTTTG+TGG | + | chr8_1:79149456-79149475 | None:intergenic | 35.0% | |
| TGATGCATCAATAGGAACAA+GGG | + | chr8_1:79149587-79149606 | None:intergenic | 35.0% | |
| TTGATGCATCAATAGGAACA+AGG | + | chr8_1:79149588-79149607 | None:intergenic | 35.0% | |
| AAAGAGTCAAGACACATATG+AGG | - | chr8_1:79149648-79149667 | Msa1216970:intron | 35.0% | |
| !! | CACGAGTTATTTTCAAGGAT+TGG | + | chr8_1:79149687-79149706 | None:intergenic | 35.0% |
| GGCTCCAATCCATTATTTAA+TGG | - | chr8_1:79150013-79150032 | Msa1216970:five_prime_UTR | 35.0% | |
| ! | GATTGAACTTGGGAACTTTT+AGG | + | chr8_1:79150039-79150058 | None:intergenic | 35.0% |
| !! | CCGTTTTCAAGATTGAACTT+GGG | + | chr8_1:79150049-79150068 | None:intergenic | 35.0% |
| CCCAAGTTCAATCTTGAAAA+CGG | - | chr8_1:79150046-79150065 | Msa1216970:five_prime_UTR | 35.0% | |
| !! | ACCGTTTTCAAGATTGAACT+TGG | + | chr8_1:79150050-79150069 | None:intergenic | 35.0% |
| AAGTTCAATCTTGAAAACGG+TGG | - | chr8_1:79150049-79150068 | Msa1216970:five_prime_UTR | 35.0% | |
| CTTGTTGAATATGACCACTA+TGG | + | chr8_1:79150078-79150097 | None:intergenic | 35.0% | |
| CATAGTGGTCATATTCAACA+AGG | - | chr8_1:79150076-79150095 | Msa1216970:five_prime_UTR | 35.0% | |
| TGCTTTGTGAAGAATGGAAA+AGG | - | chr8_1:79150115-79150134 | Msa1216970:five_prime_UTR | 35.0% | |
| GAATGGAAAAGGAAAATGTC+AGG | - | chr8_1:79150126-79150145 | Msa1216970:five_prime_UTR | 35.0% | |
| GTAACATGTGTTCTATAGGA+TGG | - | chr8_1:79150387-79150406 | Msa1216970:five_prime_UTR | 35.0% | |
| ATAGGATGGTTACACAAAAG+AGG | - | chr8_1:79150401-79150420 | Msa1216970:five_prime_UTR | 35.0% | |
| CAAGTGAACTTTCAACATCT+CGG | + | chr8_1:79150479-79150498 | None:intergenic | 35.0% | |
| ATGTTGAAAGTTCACTTGAC+AGG | - | chr8_1:79150481-79150500 | Msa1216970:intron | 35.0% | |
| TGTTGAAAGTTCACTTGACA+GGG | - | chr8_1:79150482-79150501 | Msa1216970:intron | 35.0% | |
| !!! | TTGATATTTTGGTGGGTCAA+AGG | - | chr8_1:79150707-79150726 | Msa1216970:intron | 35.0% |
| AAAACCTGTTGTGTTTGACA+TGG | - | chr8_1:79150833-79150852 | Msa1216970:intron | 35.0% | |
| TTAAGGTCGATTACTTGAAC+AGG | + | chr8_1:79150906-79150925 | None:intergenic | 35.0% | |
| TGTTCAAGTAATCGACCTTA+AGG | - | chr8_1:79150905-79150924 | Msa1216970:intron | 35.0% | |
| TCACTTCCAAGAAAGGAAAA+AGG | - | chr8_1:79150992-79151011 | Msa1216970:intron | 35.0% | |
| CATGAAACCCGAATTAAATG+TGG | + | chr8_1:79151159-79151178 | None:intergenic | 35.0% | |
| ! | ATTCGGGTTTCATGCAAATT+TGG | - | chr8_1:79151165-79151184 | Msa1216970:intron | 35.0% |
| TATGTTAAAGCCATTCCTCA+TGG | - | chr8_1:79151356-79151375 | Msa1216970:five_prime_UTR | 35.0% | |
| ATGTTAAAGCCATTCCTCAT+GGG | - | chr8_1:79151357-79151376 | Msa1216970:five_prime_UTR | 35.0% | |
| TTACTAAAATGCACCTTCTC+GGG | + | chr8_1:79151442-79151461 | None:intergenic | 35.0% | |
| GTTACTAAAATGCACCTTCT+CGG | + | chr8_1:79151443-79151462 | None:intergenic | 35.0% | |
| ! | GTGTTTTCATGCACATTCTA+TGG | - | chr8_1:79151599-79151618 | Msa1216970:intron | 35.0% |
| !! | TATGGATTTGTTACCAGCAA+AGG | - | chr8_1:79151617-79151636 | Msa1216970:intron | 35.0% |
| TGAGAAAAATCGGTGAAGTT+TGG | - | chr8_1:79151672-79151691 | Msa1216970:intron | 35.0% | |
| GAGAAAAATCGGTGAAGTTT+GGG | - | chr8_1:79151673-79151692 | Msa1216970:intron | 35.0% | |
| AGAAAAATCGGTGAAGTTTG+GGG | - | chr8_1:79151674-79151693 | Msa1216970:intron | 35.0% | |
| AATACTGTAATATTGGACGC+TGG | + | chr8_1:79151780-79151799 | None:intergenic | 35.0% | |
| ACCTTTGCCAAATTAGTCAA+GGG | + | chr8_1:79151813-79151832 | None:intergenic | 35.0% | |
| AACCTTTGCCAAATTAGTCA+AGG | + | chr8_1:79151814-79151833 | None:intergenic | 35.0% | |
| AAACATAAGCTCCAGAATTC+AGG | - | chr8_1:79151845-79151864 | Msa1216970:intron | 35.0% | |
| ACTAATGCTTACCTGAATTC+TGG | + | chr8_1:79151859-79151878 | None:intergenic | 35.0% | |
| !! | GAAGACTAACGTTGATGATA+GGG | + | chr8_1:79152017-79152036 | None:intergenic | 35.0% |
| !! | TGAAGACTAACGTTGATGAT+AGG | + | chr8_1:79152018-79152037 | None:intergenic | 35.0% |
| !! | ATCAACGTTAGTCTTCAAGT+TGG | - | chr8_1:79152021-79152040 | Msa1216970:intron | 35.0% |
| !! | CTACACTTGATAGTGATAGA+AGG | - | chr8_1:79152127-79152146 | Msa1216970:intron | 35.0% |
| AAATTCCAAAATGTTGCAGG+AGG | - | chr8_1:79152251-79152270 | Msa1216970:five_prime_UTR | 35.0% | |
| ! | ATAAACCTCCTGCAACATTT+TGG | + | chr8_1:79152259-79152278 | None:intergenic | 35.0% |
| !! | TTCTGATTCGAACACTGTTT+TGG | + | chr8_1:79152388-79152407 | None:intergenic | 35.0% |
| !! | TCATAACGGATATCACCATA+CGG | - | chr8_1:79152554-79152573 | Msa1216970:intron | 35.0% |
| ! | AAGTCTGAAGCCAAAATTTG+AGG | - | chr8_1:79152794-79152813 | Msa1216970:intron | 35.0% |
| ! | ATCAAGTGATGGAAAAATGG+TGG | - | chr8_1:79152851-79152870 | Msa1216970:intron | 35.0% |
| ! | TGAGCACATTTTTCTTCACT+AGG | + | chr8_1:79153038-79153057 | None:intergenic | 35.0% |
| GTATCAACAACAATCCGATG+AGG | + | chr8_1:79147098-79147117 | None:intergenic | 40.0% | |
| CTCCTTTATGCTCAATATGC+AGG | - | chr8_1:79147290-79147309 | Msa1216970:intron | 40.0% | |
| TGCCTGCATATTGAGCATAA+AGG | + | chr8_1:79147295-79147314 | None:intergenic | 40.0% | |
| TGACCATCAATGCCAATACA+TGG | - | chr8_1:79147316-79147335 | Msa1216970:intron | 40.0% | |
| ! | ACTCCATGTATTGGCATTGA+TGG | + | chr8_1:79147322-79147341 | None:intergenic | 40.0% |
| ! | GATGATATTGCTGTTGGAGT+TGG | - | chr8_1:79147396-79147415 | Msa1216970:intron | 40.0% |
| ! | TTTGGGAGTATGGTACCATT+AGG | + | chr8_1:79147441-79147460 | None:intergenic | 40.0% |
| GGAAGATATCCACCAACATT+TGG | + | chr8_1:79147459-79147478 | None:intergenic | 40.0% | |
| TGTCTTATGACTCAAATGGG+AGG | + | chr8_1:79147644-79147663 | None:intergenic | 40.0% | |
| ! | ACATGCCACTTGATTGAATC+AGG | - | chr8_1:79147752-79147771 | Msa1216970:CDS | 40.0% |
| ! | CATGCCACTTGATTGAATCA+GGG | - | chr8_1:79147753-79147772 | Msa1216970:CDS | 40.0% |
| CATTCCCTGATTCAATCAAG+TGG | + | chr8_1:79147760-79147779 | None:intergenic | 40.0% | |
| AATCAGGGAATGACAACAAC+AGG | - | chr8_1:79147768-79147787 | Msa1216970:intron | 40.0% | |
| TAACCACGCGCTATATTACA+TGG | + | chr8_1:79147899-79147918 | None:intergenic | 40.0% | |
| AAGAGAAAAGAGAGGATGAG+AGG | - | chr8_1:79148189-79148208 | Msa1216970:CDS | 40.0% | |
| !! | ACTCAGTTTGTTGACCGTTA+GGG | + | chr8_1:79148353-79148372 | None:intergenic | 40.0% |
| !! | AACTCAGTTTGTTGACCGTT+AGG | + | chr8_1:79148354-79148373 | None:intergenic | 40.0% |
| GATCATGGTATCAGGGAAAA+AGG | - | chr8_1:79148528-79148547 | Msa1216970:intron | 40.0% | |
| ATTAACACTTCCTGAGCTGT+TGG | + | chr8_1:79148575-79148594 | None:intergenic | 40.0% | |
| !! | AAAATCAGCTTGGTTTGGTG+TGG | + | chr8_1:79148913-79148932 | None:intergenic | 40.0% |
| CAGAACTAAACTCACAGACA+AGG | + | chr8_1:79149020-79149039 | None:intergenic | 40.0% | |
| !! | TCCTTTTCTTGTTGTATGGG+GGG | - | chr8_1:79149152-79149171 | Msa1216970:five_prime_UTR | 40.0% |
| TATCTGACGATTGTTGCAAG+CGG | - | chr8_1:79149308-79149327 | Msa1216970:intron | 40.0% | |
| AAGTTGTGCCTCACCAATAT+TGG | - | chr8_1:79149368-79149387 | Msa1216970:intron | 40.0% | |
| AGTTGTGCCTCACCAATATT+GGG | - | chr8_1:79149369-79149388 | Msa1216970:intron | 40.0% | |
| TGTGTATGACCTGGTATTCA+GGG | + | chr8_1:79149408-79149427 | None:intergenic | 40.0% | |
| ATGTGTATGACCTGGTATTC+AGG | + | chr8_1:79149409-79149428 | None:intergenic | 40.0% | |
| TCAATAGGAACAAGGGTGAT+AGG | + | chr8_1:79149580-79149599 | None:intergenic | 40.0% | |
| TTTCATGTGGGACTCTTTCA+TGG | - | chr8_1:79149868-79149887 | Msa1216970:intron | 40.0% | |
| GAGCCATCAGATATTCCATA+TGG | + | chr8_1:79149998-79150017 | None:intergenic | 40.0% | |
| CCATTCTTCACAAAGCAATG+AGG | + | chr8_1:79150112-79150131 | None:intergenic | 40.0% | |
| CCTCATTGCTTTGTGAAGAA+TGG | - | chr8_1:79150109-79150128 | Msa1216970:five_prime_UTR | 40.0% | |
| CGTTTGTGCATGCAATTATG+AGG | + | chr8_1:79150190-79150209 | None:intergenic | 40.0% | |
| TTCAGTCACTAAATCTAGCG+AGG | + | chr8_1:79150279-79150298 | None:intergenic | 40.0% | |
| TGTAGCAACAAGTACCCTTA+CGG | + | chr8_1:79150442-79150461 | None:intergenic | 40.0% | |
| GAACTTTCAACATCTCGGTT+AGG | + | chr8_1:79150474-79150493 | None:intergenic | 40.0% | |
| ATGTCCATGTCAAACACAAC+AGG | + | chr8_1:79150840-79150859 | None:intergenic | 40.0% | |
| ! | CTTGAACAGGCACTTTAAGA+AGG | + | chr8_1:79150893-79150912 | None:intergenic | 40.0% |
| ! | TGGGAACCTTTTTCCTTTCT+TGG | + | chr8_1:79151001-79151020 | None:intergenic | 40.0% |
| ! | GATGATATACCAGTTGGTCT+AGG | - | chr8_1:79151275-79151294 | Msa1216970:five_prime_UTR | 40.0% |
| AAAACATCTCCTAGACCAAC+TGG | + | chr8_1:79151287-79151306 | None:intergenic | 40.0% | |
| !! | CATAAAGAGTGTCAGAATCG+AGG | + | chr8_1:79151394-79151413 | None:intergenic | 40.0% |
| CTCGATTCTGACACTCTTTA+TGG | - | chr8_1:79151392-79151411 | Msa1216970:five_prime_UTR | 40.0% | |
| TTCTGACACTCTTTATGGTC+TGG | - | chr8_1:79151397-79151416 | Msa1216970:five_prime_UTR | 40.0% | |
| TTAGTGTATCAGTCCTTTGC+TGG | + | chr8_1:79151633-79151652 | None:intergenic | 40.0% | |
| ! | TAACGGACCCTTGACTAATT+TGG | - | chr8_1:79151803-79151822 | Msa1216970:intron | 40.0% |
| ACCCTTGACTAATTTGGCAA+AGG | - | chr8_1:79151809-79151828 | Msa1216970:intron | 40.0% | |
| !!! | TTTCAATCGTTTTTGGTCCC+TGG | + | chr8_1:79152052-79152071 | None:intergenic | 40.0% |
| TTGCAGGAGGTTTATGTAGT+GGG | - | chr8_1:79152264-79152283 | Msa1216970:intron | 40.0% | |
| AGCAGGAATACAGAAGACAA+AGG | - | chr8_1:79152297-79152316 | Msa1216970:intron | 40.0% | |
| !! | TTTTGGCTGCTAAAGGATCT+AGG | + | chr8_1:79152371-79152390 | None:intergenic | 40.0% |
| !!! | AACACTGTTTTGGCTGCTAA+AGG | + | chr8_1:79152378-79152397 | None:intergenic | 40.0% |
| TAGAGTGAGTTCGTTTGCAA+CGG | - | chr8_1:79152443-79152462 | Msa1216970:intron | 40.0% | |
| AGTTCGTTTGCAACGGTTAT+AGG | - | chr8_1:79152450-79152469 | Msa1216970:intron | 40.0% | |
| ! | GAATTTGCTTCAAACGGTGT+AGG | + | chr8_1:79152536-79152555 | None:intergenic | 40.0% |
| ACATTCCTGGGAGAAATTCT+AGG | - | chr8_1:79152744-79152763 | Msa1216970:intron | 40.0% | |
| AATTCTAGGTGCAGTAGTCT+TGG | - | chr8_1:79152758-79152777 | Msa1216970:intron | 40.0% | |
| ! | ATGGGCTTCACCTCAAATTT+TGG | + | chr8_1:79152807-79152826 | None:intergenic | 40.0% |
| CCACTAGCTAGGACTTTAAT+GGG | + | chr8_1:79152825-79152844 | None:intergenic | 40.0% | |
| TTGATTCAATGCCACTAGCT+AGG | + | chr8_1:79152836-79152855 | None:intergenic | 40.0% | |
| ! | AGTGGCATTGAATCAAGTGA+TGG | - | chr8_1:79152840-79152859 | Msa1216970:intron | 40.0% |
| ! | AAGTGATGGAAAAATGGTGG+TGG | - | chr8_1:79152854-79152873 | Msa1216970:intron | 40.0% |
| TGATCAGTATCAGTCAGCTA+AGG | - | chr8_1:79152959-79152978 | Msa1216970:five_prime_UTR | 40.0% | |
| TGCTCAATTCCACGTCTATA+AGG | - | chr8_1:79153052-79153071 | Msa1216970:five_prime_UTR | 40.0% | |
| GATAAAACGCCTTATAGACG+TGG | + | chr8_1:79153064-79153083 | None:intergenic | 40.0% | |
| GAGCAGAGCGAATAAATCGT+CGG | + | chr8_1:79147132-79147151 | None:intergenic | 45.0% | |
| !! | GTGAAGTGTTGAGCTTGAGA+AGG | + | chr8_1:79147157-79147176 | None:intergenic | 45.0% |
| ACCTGCACTACTCCATGTAT+TGG | + | chr8_1:79147331-79147350 | None:intergenic | 45.0% | |
| GGGAGAGATGATATTGCTGT+TGG | - | chr8_1:79147390-79147409 | Msa1216970:intron | 45.0% | |
| ! | GATATTGCTGTTGGAGTTGG+AGG | - | chr8_1:79147399-79147418 | Msa1216970:intron | 45.0% |
| GGTACCATACTCCCAAATGT+TGG | - | chr8_1:79147444-79147463 | Msa1216970:intron | 45.0% | |
| ACCATACTCCCAAATGTTGG+TGG | - | chr8_1:79147447-79147466 | Msa1216970:intron | 45.0% | |
| TCCACCAACATTTGGGAGTA+TGG | + | chr8_1:79147451-79147470 | None:intergenic | 45.0% | |
| CAACAGGAGGATGTAGATAC+AGG | - | chr8_1:79147784-79147803 | Msa1216970:intron | 45.0% | |
| TCGATGCAAACTACGGTATC+AGG | - | chr8_1:79147844-79147863 | Msa1216970:intron | 45.0% | |
| GGTAGTATTATACCTGTGGC+AGG | + | chr8_1:79147878-79147897 | None:intergenic | 45.0% | |
| CTACCATGTAATATAGCGCG+TGG | - | chr8_1:79147893-79147912 | Msa1216970:intron | 45.0% | |
| CTATGTAAGTGGGACACTGA+TGG | + | chr8_1:79148010-79148029 | None:intergenic | 45.0% | |
| CATCAGTGTCCCACTTACAT+AGG | - | chr8_1:79148008-79148027 | Msa1216970:intron | 45.0% | |
| GAGGATGAGAGGAATGATTG+TGG | - | chr8_1:79148200-79148219 | Msa1216970:CDS | 45.0% | |
| GCAACGCAAGTAACTGTCAT+TGG | + | chr8_1:79148385-79148404 | None:intergenic | 45.0% | |
| TCCCACAACTCTGTTTGTGA+TGG | - | chr8_1:79148613-79148632 | Msa1216970:five_prime_UTR | 45.0% | |
| CCCATCACAAACAGAGTTGT+GGG | + | chr8_1:79148617-79148636 | None:intergenic | 45.0% | |
| CCCACAACTCTGTTTGTGAT+GGG | - | chr8_1:79148614-79148633 | Msa1216970:five_prime_UTR | 45.0% | |
| TCCCATCACAAACAGAGTTG+TGG | + | chr8_1:79148618-79148637 | None:intergenic | 45.0% | |
| GGAAAAGTCTTTGTAGGTGC+AGG | - | chr8_1:79148952-79148971 | Msa1216970:intron | 45.0% | |
| ! | TGTTTGCTGCTATCTGCCAT+CGG | - | chr8_1:79148979-79148998 | Msa1216970:intron | 45.0% |
| !! | TGTGAGTTTAGTTCTGCTGC+TGG | - | chr8_1:79149024-79149043 | Msa1216970:intron | 45.0% |
| !! | TTTTGGTGTATGACCTGCTG+CGG | - | chr8_1:79149101-79149120 | Msa1216970:intron | 45.0% |
| ACCCCCCATACAACAAGAAA+AGG | + | chr8_1:79149156-79149175 | None:intergenic | 45.0% | |
| GTGTATGACCTGGTATTCAG+GGG | + | chr8_1:79149407-79149426 | None:intergenic | 45.0% | |
| !! | GGGTTTACTCATGATGGACA+CGG | + | chr8_1:79149903-79149922 | None:intergenic | 45.0% |
| ! | GGTTACACAAAAGAGGTACG+CGG | - | chr8_1:79150408-79150427 | Msa1216970:five_prime_UTR | 45.0% |
| TCAAGCAACCACAACAAGCA+GGG | - | chr8_1:79150733-79150752 | Msa1216970:intron | 45.0% | |
| TTTGACATGGACATGAGTGC+AGG | - | chr8_1:79150846-79150865 | Msa1216970:intron | 45.0% | |
| TCATTGTGAGTCCTACTGGA+TGG | - | chr8_1:79151198-79151217 | Msa1216970:five_prime_UTR | 45.0% | |
| CATTGTGAGTCCTACTGGAT+GGG | - | chr8_1:79151199-79151218 | Msa1216970:five_prime_UTR | 45.0% | |
| GGTCGTGATGATATACCAGT+TGG | - | chr8_1:79151269-79151288 | Msa1216970:five_prime_UTR | 45.0% | |
| ACTTGCAATCTCCAACGACT+GGG | + | chr8_1:79151337-79151356 | None:intergenic | 45.0% | |
| TACTTGCAATCTCCAACGAC+TGG | + | chr8_1:79151338-79151357 | None:intergenic | 45.0% | |
| GTGCATGAAAACACGGTGTT+TGG | + | chr8_1:79151593-79151612 | None:intergenic | 45.0% | |
| CTAGTGGCTGTCTAAGTTCA+GGG | + | chr8_1:79151719-79151738 | None:intergenic | 45.0% | |
| ACTTAGACAGCCACTAGCTA+TGG | - | chr8_1:79151722-79151741 | Msa1216970:intron | 45.0% | |
| AGCCACTAGCTATGGAAGTT+TGG | - | chr8_1:79151730-79151749 | Msa1216970:intron | 45.0% | |
| GCCACTAGCTATGGAAGTTT+GGG | - | chr8_1:79151731-79151750 | Msa1216970:intron | 45.0% | |
| TCCCAAACTTCCATAGCTAG+TGG | + | chr8_1:79151735-79151754 | None:intergenic | 45.0% | |
| !! | TCTTCAAGTTGGTGAGTCCA+GGG | - | chr8_1:79152032-79152051 | Msa1216970:intron | 45.0% |
| GTTGCAGGAGGTTTATGTAG+TGG | - | chr8_1:79152263-79152282 | Msa1216970:intron | 45.0% | |
| TGCAGGAGGTTTATGTAGTG+GGG | - | chr8_1:79152265-79152284 | Msa1216970:intron | 45.0% | |
| ACTCTACGCTGAATTCTCAG+TGG | + | chr8_1:79152429-79152448 | None:intergenic | 45.0% | |
| CGTTTGCAACGGTTATAGGT+AGG | - | chr8_1:79152454-79152473 | Msa1216970:intron | 45.0% | |
| CAGGACAAGAAAAACACCAG+AGG | - | chr8_1:79152482-79152501 | Msa1216970:intron | 45.0% | |
| TAGGCTTGACAATAGACGCT+TGG | + | chr8_1:79152517-79152536 | None:intergenic | 45.0% | |
| TCCTGCAAACGCAATCACAA+AGG | + | chr8_1:79152723-79152742 | None:intergenic | 45.0% | |
| CCCATTAAAGTCCTAGCTAG+TGG | - | chr8_1:79152822-79152841 | Msa1216970:intron | 45.0% | |
| GCCACTAGCTAGGACTTTAA+TGG | + | chr8_1:79152826-79152845 | None:intergenic | 45.0% | |
| CAGTATCAGTCAGCTAAGGT+AGG | - | chr8_1:79152963-79152982 | Msa1216970:five_prime_UTR | 45.0% | |
| TCACTAGGCTTATCATCACG+AGG | + | chr8_1:79153023-79153042 | None:intergenic | 45.0% | |
| GAGATCGAATAATGCTGCCG+AGG | - | chr8_1:79146997-79147016 | Msa1216970:CDS | 50.0% | |
| ACTACAGCTGCAGCTAACCT+CGG | + | chr8_1:79147017-79147036 | None:intergenic | 50.0% | |
| GCCAATACATGGAGTAGTGC+AGG | - | chr8_1:79147327-79147346 | Msa1216970:intron | 50.0% | |
| GACGGTGGAATGCTACCTAA+TGG | - | chr8_1:79147423-79147442 | Msa1216970:intron | 50.0% | |
| TGACTCAAATGGGAGGACTG+AGG | + | chr8_1:79147637-79147656 | None:intergenic | 50.0% | |
| CAGGGAATGACAACAACAGG+AGG | - | chr8_1:79147771-79147790 | Msa1216970:intron | 50.0% | |
| TACAGGCAGACCATTCCTGT+AGG | - | chr8_1:79147801-79147820 | Msa1216970:intron | 50.0% | |
| ACAGGCAGACCATTCCTGTA+GGG | - | chr8_1:79147802-79147821 | Msa1216970:intron | 50.0% | |
| ! | TGAGCTGTTGGTTGCTCTAG+TGG | + | chr8_1:79148563-79148582 | None:intergenic | 50.0% |
| ACTAGAGCAACCAACAGCTC+AGG | - | chr8_1:79148562-79148581 | Msa1216970:intron | 50.0% | |
| TCTTGTGTACCTCAGCAGTG+TGG | - | chr8_1:79148767-79148786 | Msa1216970:five_prime_UTR | 50.0% | |
| ! | ACCCTTTTGCAGCATACCCA+GGG | - | chr8_1:79148855-79148874 | Msa1216970:intron | 50.0% |
| !!! | TTCTGCTGCTGGTGCTGTTT+TGG | - | chr8_1:79149035-79149054 | Msa1216970:intron | 50.0% |
| !!! | TCTGCTGCTGGTGCTGTTTT+GGG | - | chr8_1:79149036-79149055 | Msa1216970:intron | 50.0% |
| !!! | TTTTGGGGCTGCTGTGTGTA+TGG | - | chr8_1:79149052-79149071 | Msa1216970:intron | 50.0% |
| CTGCTGTGTGTATGGTGTGT+TGG | - | chr8_1:79149060-79149079 | Msa1216970:intron | 50.0% | |
| ! | TGTATGGTGTGTTGGCAGCT+TGG | - | chr8_1:79149068-79149087 | Msa1216970:intron | 50.0% |
| ! | GTATGGTGTGTTGGCAGCTT+GGG | - | chr8_1:79149069-79149088 | Msa1216970:intron | 50.0% |
| !! | AGCTTGGGTGCTATGGCTTT+TGG | - | chr8_1:79149084-79149103 | Msa1216970:intron | 50.0% |
| !!! | GCGGCTGTTATTGCTGGTTT+TGG | - | chr8_1:79149120-79149139 | Msa1216970:intron | 50.0% |
| AGCGGTAGTTAACCCATGCT+TGG | - | chr8_1:79149326-79149345 | Msa1216970:intron | 50.0% | |
| CTGGACTCCCAATATTGGTG+AGG | + | chr8_1:79149379-79149398 | None:intergenic | 50.0% | |
| CTCACCAATATTGGGAGTCC+AGG | - | chr8_1:79149377-79149396 | Msa1216970:intron | 50.0% | |
| TATGACCTGGTATTCAGGGG+CGG | + | chr8_1:79149404-79149423 | None:intergenic | 50.0% | |
| ATGTGGGACTCTTTCATGGC+TGG | - | chr8_1:79149872-79149891 | Msa1216970:intron | 50.0% | |
| GAAAACGGTGGTGTCCATAG+TGG | - | chr8_1:79150061-79150080 | Msa1216970:five_prime_UTR | 50.0% | |
| CTCAAGCAACCACAACAAGC+AGG | - | chr8_1:79150732-79150751 | Msa1216970:intron | 50.0% | |
| ! | TTGTACCTCCCTGCTTGTTG+TGG | + | chr8_1:79150744-79150763 | None:intergenic | 50.0% |
| GCGATCATTGTGAGTCCTAC+TGG | - | chr8_1:79151194-79151213 | Msa1216970:five_prime_UTR | 50.0% | |
| GATCCAATACTCCCAGTCGT+TGG | - | chr8_1:79151323-79151342 | Msa1216970:five_prime_UTR | 50.0% | |
| ! | TCTCCAACGACTGGGAGTAT+TGG | + | chr8_1:79151329-79151348 | None:intergenic | 50.0% |
| AAAGCCATTCCTCATGGGAG+TGG | - | chr8_1:79151362-79151381 | Msa1216970:five_prime_UTR | 50.0% | |
| AAGCCATTCCTCATGGGAGT+GGG | - | chr8_1:79151363-79151382 | Msa1216970:five_prime_UTR | 50.0% | |
| GCTAGTGGCTGTCTAAGTTC+AGG | + | chr8_1:79151720-79151739 | None:intergenic | 50.0% | |
| !! | GTCTTCAAGTTGGTGAGTCC+AGG | - | chr8_1:79152031-79152050 | Msa1216970:intron | 50.0% |
| GCAGGAGGTTTATGTAGTGG+GGG | - | chr8_1:79152266-79152285 | Msa1216970:intron | 50.0% | |
| ! | CAGGAGGTTTATGTAGTGGG+GGG | - | chr8_1:79152267-79152286 | Msa1216970:intron | 50.0% |
| CGGTTATAGGTAGGCTGAAC+AGG | - | chr8_1:79152463-79152482 | Msa1216970:intron | 50.0% | |
| CGCTTGGAAAACAGAACCTC+TGG | + | chr8_1:79152501-79152520 | None:intergenic | 50.0% | |
| GCCTTTGTGATTGCGTTTGC+AGG | - | chr8_1:79152719-79152738 | Msa1216970:intron | 50.0% | |
| CGTTTGCAGGACACATTCCT+GGG | - | chr8_1:79152732-79152751 | Msa1216970:intron | 50.0% | |
| CTGCACCTAGAATTTCTCCC+AGG | + | chr8_1:79152752-79152771 | None:intergenic | 50.0% | |
| ! | TGCAGTAGTCTTGGCTGAGA+AGG | - | chr8_1:79152767-79152786 | Msa1216970:intron | 50.0% |
| GATCGGAGTAGCAGCTGTAG+TGG | - | chr8_1:79147064-79147083 | Msa1216970:CDS | 55.0% | |
| ! | TAGTGGACAGCGAGCCTCAT+CGG | - | chr8_1:79147081-79147100 | Msa1216970:CDS | 55.0% |
| GCTGTTGGAGTTGGAGGAGA+CGG | - | chr8_1:79147405-79147424 | Msa1216970:intron | 55.0% | |
| CTCAAATGGGAGGACTGAGG+AGG | + | chr8_1:79147634-79147653 | None:intergenic | 55.0% | |
| CAGACCATTCCTGTAGGGCT+TGG | - | chr8_1:79147807-79147826 | Msa1216970:intron | 55.0% | |
| ACCATTCCTGTAGGGCTTGG+AGG | - | chr8_1:79147810-79147829 | Msa1216970:intron | 55.0% | |
| TCCTCCAAGCCCTACAGGAA+TGG | + | chr8_1:79147814-79147833 | None:intergenic | 55.0% | |
| AAACGTCCTCCAAGCCCTAC+AGG | + | chr8_1:79147819-79147838 | None:intergenic | 55.0% | |
| CAGGAAAGCTTTCCTGCCAC+AGG | - | chr8_1:79147863-79147882 | Msa1216970:intron | 55.0% | |
| ! | GACCCTTTTGCAGCATACCC+AGG | - | chr8_1:79148854-79148873 | Msa1216970:intron | 55.0% |
| CCCCTGGGTATGCTGCAAAA+GGG | + | chr8_1:79148859-79148878 | None:intergenic | 55.0% | |
| ! | CCCTTTTGCAGCATACCCAG+GGG | - | chr8_1:79148856-79148875 | Msa1216970:intron | 55.0% |
| ! | TTTTGCAGCATACCCAGGGG+CGG | - | chr8_1:79148859-79148878 | Msa1216970:intron | 55.0% |
| GTCTACTGCTAAGCAGCCGA+TGG | + | chr8_1:79148998-79149017 | None:intergenic | 55.0% | |
| !!! | CTGCTGCTGGTGCTGTTTTG+GGG | - | chr8_1:79149037-79149056 | Msa1216970:intron | 55.0% |
| TGTTGGCAGCTTGGGTGCTA+TGG | - | chr8_1:79149077-79149096 | Msa1216970:intron | 55.0% | |
| TAACAGAGTGGCTGTGCTGC+TGG | + | chr8_1:79149180-79149199 | None:intergenic | 55.0% | |
| CGGACCTGGACTCCCAATAT+TGG | + | chr8_1:79149384-79149403 | None:intergenic | 55.0% | |
| TACGCGGTGAAGACTCCGTA+AGG | - | chr8_1:79150424-79150443 | Msa1216970:five_prime_UTR | 55.0% | |
| ACGCGGTGAAGACTCCGTAA+GGG | - | chr8_1:79150425-79150444 | Msa1216970:five_prime_UTR | 55.0% | |
| AGCAACCACAACAAGCAGGG+AGG | - | chr8_1:79150736-79150755 | Msa1216970:intron | 55.0% | |
| GCTGCATTTGCCCATCCAGT+AGG | + | chr8_1:79151212-79151231 | None:intergenic | 55.0% | |
| AGCCATTCCTCATGGGAGTG+GGG | - | chr8_1:79151364-79151383 | Msa1216970:five_prime_UTR | 55.0% | |
| TCAGGGTGATCTGTATCCCG+TGG | + | chr8_1:79151702-79151721 | None:intergenic | 55.0% | |
| GCGTTTGCAGGACACATTCC+TGG | - | chr8_1:79152731-79152750 | Msa1216970:intron | 55.0% | |
| GTTGGAGTTGGAGGAGACGG+TGG | - | chr8_1:79147408-79147427 | Msa1216970:intron | 60.0% | |
| GCCCCTGGGTATGCTGCAAA+AGG | + | chr8_1:79148860-79148879 | None:intergenic | 60.0% | |
| GACCTGAACAGGTCCTGGTG+TGG | - | chr8_1:79148881-79148900 | Msa1216970:intron | 60.0% | |
| TGCCACACCAGGACCTGTTC+AGG | + | chr8_1:79148886-79148905 | None:intergenic | 60.0% | |
| CCAGCAATAACAGCCGCAGC+AGG | + | chr8_1:79149117-79149136 | None:intergenic | 60.0% | |
| CCTGCTGCGGCTGTTATTGC+TGG | - | chr8_1:79149114-79149133 | Msa1216970:intron | 60.0% | |
| GCCATTCCTCATGGGAGTGG+GGG | - | chr8_1:79151365-79151384 | Msa1216970:five_prime_UTR | 60.0% | |
| CCATTCCTCATGGGAGTGGG+GGG | - | chr8_1:79151366-79151385 | Msa1216970:five_prime_UTR | 60.0% | |
| ATCTACCTCGCAGCCCGAGA+AGG | - | chr8_1:79151426-79151445 | Msa1216970:five_prime_UTR | 60.0% | |
| ! | CGGTGAAGTTTGGGGCTCCA+CGG | - | chr8_1:79151682-79151701 | Msa1216970:intron | 60.0% |
| ! | GGTGAAGTTTGGGGCTCCAC+GGG | - | chr8_1:79151683-79151702 | Msa1216970:intron | 60.0% |
| TAGTGGGGGGACACATCAGC+AGG | - | chr8_1:79152280-79152299 | Msa1216970:intron | 60.0% | |
| CCACGGTCACCACACTGCTG+AGG | + | chr8_1:79148779-79148798 | None:intergenic | 65.0% | |
| CCTCAGCAGTGTGGTGACCG+TGG | - | chr8_1:79148776-79148795 | Msa1216970:five_prime_UTR | 65.0% | |
| ACCTGTTCAGGTCCGCCCCT+GGG | + | chr8_1:79148874-79148893 | None:intergenic | 65.0% | |
| GGTGTGGCACTTGCCACACC+AGG | + | chr8_1:79148897-79148916 | None:intergenic | 65.0% | |
| CTGGTATTCAGGGGCGGACC+TGG | + | chr8_1:79149398-79149417 | None:intergenic | 65.0% | |
| CAGGTCCGCCCCTGAATACC+AGG | - | chr8_1:79149396-79149415 | Msa1216970:intron | 65.0% | |
| CCCCCCACTCCCATGAGGAA+TGG | + | chr8_1:79151369-79151388 | None:intergenic | 65.0% | |
| AGGTACCCCCCACTCCCATG+AGG | + | chr8_1:79151374-79151393 | None:intergenic | 65.0% | |
| ATGCACCTTCTCGGGCTGCG+AGG | + | chr8_1:79151434-79151453 | None:intergenic | 65.0% | |
| ACCCAGGGGCGGACCTGAAC+AGG | - | chr8_1:79148870-79148889 | Msa1216970:intron | 70.0% | |
| GACCTGTTCAGGTCCGCCCC+TGG | + | chr8_1:79148875-79148894 | None:intergenic | 70.0% | |
| GGGCGGACCTGAACAGGTCC+TGG | - | chr8_1:79148876-79148895 | Msa1216970:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 79146958 | 79153091 | 79146958 | ID=Msa1216970;Name=Msa1216970 |
| chr8_1 | mRNA | 79146958 | 79153091 | 79146958 | ID=Msa1216970-mRNA-1;Parent=Msa1216970;Name=Msa1216970-mRNA-1;_AED=0.29;_eAED=0.29;_QI=1971|1|0.91|1|0.72|0.75|12|0|260 |
| chr8_1 | exon | 79146958 | 79147308 | 79146958 | ID=Msa1216970-mRNA-1:exon:27469;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79147474 | 79147779 | 79147474 | ID=Msa1216970-mRNA-1:exon:27468;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79148183 | 79148384 | 79148183 | ID=Msa1216970-mRNA-1:exon:27467;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79148602 | 79148855 | 79148602 | ID=Msa1216970-mRNA-1:exon:27466;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79149123 | 79149320 | 79149123 | ID=Msa1216970-mRNA-1:exon:27465;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79149522 | 79149644 | 79149522 | ID=Msa1216970-mRNA-1:exon:27464;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79149902 | 79150186 | 79149902 | ID=Msa1216970-mRNA-1:exon:27463;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79150314 | 79150490 | 79150314 | ID=Msa1216970-mRNA-1:exon:27462;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79151174 | 79151507 | 79151174 | ID=Msa1216970-mRNA-1:exon:27461;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79152165 | 79152275 | 79152165 | ID=Msa1216970-mRNA-1:exon:27460;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79152558 | 79152737 | 79152558 | ID=Msa1216970-mRNA-1:exon:27459;Parent=Msa1216970-mRNA-1 |
| chr8_1 | exon | 79152859 | 79153091 | 79152859 | ID=Msa1216970-mRNA-1:exon:27458;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79152859 | 79153091 | 79152859 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79152558 | 79152737 | 79152558 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79152165 | 79152275 | 79152165 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79151174 | 79151507 | 79151174 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79150314 | 79150490 | 79150314 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79149902 | 79150186 | 79149902 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79149522 | 79149644 | 79149522 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79149123 | 79149320 | 79149123 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79148602 | 79148855 | 79148602 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | five_prime_UTR | 79148309 | 79148384 | 79148309 | ID=Msa1216970-mRNA-1:five_prime_utr;Parent=Msa1216970-mRNA-1 |
| chr8_1 | CDS | 79148183 | 79148308 | 79148183 | ID=Msa1216970-mRNA-1:cds;Parent=Msa1216970-mRNA-1 |
| chr8_1 | CDS | 79147474 | 79147779 | 79147474 | ID=Msa1216970-mRNA-1:cds;Parent=Msa1216970-mRNA-1 |
| chr8_1 | CDS | 79146958 | 79147308 | 79146958 | ID=Msa1216970-mRNA-1:cds;Parent=Msa1216970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
