AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1218800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218800 MtrunA17_Chr4g0068451 96.935 261 8 0 1 261 1 261 0.0 517
Msa1218800 MtrunA17_Chr3g0122861 33.333 219 134 4 6 212 8 226 4.75e-29 110
Msa1218800 MtrunA17_Chr8g0365881 35.321 218 125 4 15 223 77 287 2.83e-27 107
Msa1218800 MtrunA17_Chr6g0485841 35.533 197 121 4 14 205 13 208 3.02e-24 101
Msa1218800 MtrunA17_Chr4g0055741 28.226 248 170 4 14 256 52 296 4.69e-22 92.8
Msa1218800 MtrunA17_Chr4g0067521 28.934 197 124 3 8 194 9 199 2.90e-20 90.1
Msa1218800 MtrunA17_Chr2g0295671 33.333 186 118 3 14 194 13 197 3.03e-17 81.3
Msa1218800 MtrunA17_Chr8g0337981 30.220 182 118 4 7 181 12 191 7.15e-14 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1218800 AT4G16210.1 81.712 257 47 0 3 259 6 262 7.01e-158 439
Msa1218800 AT1G60550.1 35.780 218 124 4 15 223 86 296 1.75e-28 111
Msa1218800 AT5G43280.1 31.280 211 127 3 19 212 23 232 2.43e-25 101
Msa1218800 AT5G43280.2 31.818 176 103 2 19 178 23 197 1.09e-24 98.6
Msa1218800 AT4G16800.1 29.680 219 150 2 14 228 53 271 3.55e-23 96.3
Msa1218800 AT4G29010.1 34.555 191 119 5 14 199 14 203 1.23e-20 91.7
Msa1218800 AT3G06860.1 31.551 187 121 2 14 194 16 201 2.27e-20 90.9
Msa1218800 AT2G30660.1 29.381 194 126 5 1 186 1 191 2.66e-15 75.1
Msa1218800 AT5G65940.2 29.016 193 128 4 1 186 5 195 1.46e-14 72.8
Msa1218800 AT5G65940.3 29.016 193 128 4 1 186 5 195 1.68e-14 72.8
Msa1218800 AT5G65940.1 29.016 193 128 4 1 186 5 195 2.36e-14 72.4
Msa1218800 AT5G65940.4 29.016 193 128 4 1 186 5 195 2.36e-14 72.4
Msa1218800 AT2G30650.2 27.053 207 142 5 1 200 1 205 5.05e-13 68.2
Msa1218800 AT2G30650.1 27.053 207 142 5 1 200 1 205 8.95e-13 67.8
Msa1218800 AT1G06550.1 24.339 189 131 4 7 187 12 196 3.81e-11 63.2

Find 87 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGTCATTCCTTTATAAT+AGG 0.208113 8_1:-81458655 None:intergenic
CCGATAATTGGAGCGATTAA+AGG 0.217612 8_1:+81457108 Msa1218800:CDS
TGCGCTTGCTTGTGATATTT+TGG 0.236137 8_1:+81457158 Msa1218800:CDS
AGCATGAGTGTCCATGAATT+TGG 0.273255 8_1:-81457196 None:intergenic
CCTTTAATCGCTCCAATTAT+CGG 0.278625 8_1:-81457108 None:intergenic
CACCGCTCCATTTGCACAAC+CGG 0.282409 8_1:-81457078 None:intergenic
CTATAGTTTGGACTGTTTCT+TGG 0.293259 8_1:-81458721 None:intergenic
GATTTGGGATATTTCCTTCA+TGG 0.337364 8_1:+81457816 Msa1218800:intron
CAAATAAAAGACCTATAGTT+TGG 0.340619 8_1:-81458733 None:intergenic
ATCTTTACAGTTTCAGAGAT+TGG 0.345805 8_1:-81458758 None:intergenic
CGGTGTCGTAAACCGATAAT+TGG 0.358730 8_1:+81457096 Msa1218800:CDS
CGCAGAGGTGGCTGAAAAGT+TGG 0.386040 8_1:+81457916 Msa1218800:CDS
GTCACCACCGCGATTCCGTT+TGG 0.392759 8_1:-81456856 None:intergenic
AGCAGACAATGTTTATCATA+TGG 0.400128 8_1:+81458834 Msa1218800:three_prime_UTR
CCGCGATTCCGTTTGGTTCG+CGG 0.414612 8_1:-81456849 None:intergenic
GTTCAGTTGCTACTTTGATC+TGG 0.416183 8_1:-81456772 None:intergenic
TCAGCCACCTCTGCGGTCAA+TGG 0.418389 8_1:-81457908 None:intergenic
AGGGGCCATGCCTATTATAA+AGG 0.419253 8_1:+81458645 Msa1218800:CDS
AGACCGGGACGAATCGGTTC+GGG 0.422302 8_1:+81456954 Msa1218800:CDS
ATTTGGGATATTTCCTTCAT+GGG 0.430042 8_1:+81457817 Msa1218800:CDS
CTGTTCCGGCGTTGACCTTA+CGG 0.432274 8_1:+81457008 Msa1218800:CDS
GAATCTAGACCGGGACGAAT+CGG 0.433081 8_1:+81456948 Msa1218800:CDS
CAGAAGTTGTCGCGCATCAT+AGG 0.436131 8_1:+81457848 Msa1218800:CDS
ACGGGTAGATCGTTCTGTTC+CGG 0.437262 8_1:+81456994 Msa1218800:CDS
GAGTGACCCGGTTGTGCAAA+TGG 0.438312 8_1:+81457071 Msa1218800:CDS
GATGGCATCAAGCTGGATCT+TGG 0.455362 8_1:+81458055 Msa1218800:CDS
CCATGCTCTTTCCCTCGAAA+AGG 0.455758 8_1:+81458078 Msa1218800:CDS
GCAGAGGTGGCTGAAAAGTT+GGG 0.456586 8_1:+81457917 Msa1218800:CDS
AAAGGATTCGCTGTTACAGC+TGG 0.459087 8_1:+81457126 Msa1218800:CDS
AGTTAGCGAGTTAAGAGAAC+CGG 0.463305 8_1:-81456890 None:intergenic
ACAGAACGATCTACCCGTTC+CGG 0.466284 8_1:-81456989 None:intergenic
TAGACCGGGACGAATCGGTT+CGG 0.471210 8_1:+81456953 Msa1218800:CDS
TGCTAAAGGAGCCAAATTCA+TGG 0.473611 8_1:+81457185 Msa1218800:CDS
CAAGGGTGATGTGAAGGATC+CGG 0.474232 8_1:+81457047 Msa1218800:CDS
CTCGTCAACCGCGAACCAAA+CGG 0.483517 8_1:+81456841 Msa1218800:CDS
GTTCGGGTGATTATATTAAC+CGG 0.485972 8_1:+81456970 Msa1218800:CDS
TGCACAACCGGGTCACTCTC+CGG 0.487515 8_1:-81457066 None:intergenic
GTGATTATATTAACCGGAAC+GGG 0.488459 8_1:+81456976 Msa1218800:CDS
AGCCCGTGAGGTATCTCTTA+CGG 0.492716 8_1:+81457880 Msa1218800:CDS
CAAGAAACAGTCCAAACTAT+AGG 0.499749 8_1:+81458722 Msa1218800:CDS
TCGTGCAATGAACGTGGACC+TGG 0.500472 8_1:+81456912 Msa1218800:CDS
TGAACCGGACAAAATCGAAT+CGG 0.507039 8_1:+81456790 Msa1218800:five_prime_UTR
GGTGGCTGAAAAGTTGGGTT+TGG 0.512976 8_1:+81457922 Msa1218800:CDS
GTGCGTGATGCGCAAGGGTA+TGG 0.518005 8_1:-81456696 None:intergenic
GATCAAAGTAGCAACTGAAC+CGG 0.522771 8_1:+81456775 Msa1218800:five_prime_UTR
GATTCTTGAAAGCTTGAGCC+AGG 0.526158 8_1:-81456930 None:intergenic
TACAAGTCAGTGATAAATGA+TGG 0.528869 8_1:+81458037 Msa1218800:CDS
TCATTCCTTTATAATAGGCA+TGG 0.530631 8_1:-81458650 None:intergenic
GATAAATGATGGCATCAAGC+TGG 0.535540 8_1:+81458048 Msa1218800:CDS
AAGCTTTCAAGAATCTAGAC+CGG 0.546865 8_1:+81456938 Msa1218800:CDS
GAACCGGACAAAATCGAATC+GGG 0.549174 8_1:+81456791 Msa1218800:five_prime_UTR
GAACATTTAATTTGATAACA+AGG 0.553161 8_1:-81458881 None:intergenic
CACGCCATTGACCGCAGAGG+TGG 0.556934 8_1:+81457904 Msa1218800:CDS
AGCTTTCAAGAATCTAGACC+GGG 0.573728 8_1:+81456939 Msa1218800:CDS
TTTGGGATATTTCCTTCATG+GGG 0.573846 8_1:+81457818 Msa1218800:CDS
AAAATGCAGGAATTCATAGC+AGG 0.574394 8_1:+81458690 Msa1218800:CDS
CACCTCTGCGGTCAATGGCG+TGG 0.575697 8_1:-81457903 None:intergenic
GTTCACCGTCTTCAACAAGA+TGG 0.576684 8_1:-81457949 None:intergenic
AAACATCCTCCGCTGCCGTA+AGG 0.580087 8_1:-81457023 None:intergenic
AATTCATGGACACTCATGCT+AGG 0.587169 8_1:+81457199 Msa1218800:CDS
GGAGCAATTCAAGAAAATGC+AGG 0.596529 8_1:+81458677 Msa1218800:CDS
ACCGCTCCATTTGCACAACC+GGG 0.599495 8_1:-81457077 None:intergenic
TTCTGAGACAAACCCCATGA+AGG 0.600564 8_1:-81457830 None:intergenic
TCACCCGAACCGATTCGTCC+CGG 0.601302 8_1:-81456957 None:intergenic
TGATGCGCAAGGGTATGGTA+AGG 0.601977 8_1:-81456691 None:intergenic
GTGGTGACTATTAACCGTCC+CGG 0.603318 8_1:+81456871 Msa1218800:CDS
CGTTGACCTTACGGCAGCGG+AGG 0.606251 8_1:+81457017 Msa1218800:CDS
GGTGATTATATTAACCGGAA+CGG 0.610789 8_1:+81456975 Msa1218800:CDS
CGCTGCCGTAAGGTCAACGC+CGG 0.612184 8_1:-81457013 None:intergenic
GTTGAAGTGCGTGATGCGCA+AGG 0.623102 8_1:-81456702 None:intergenic
AATCGGGTCGAACATGACAT+CGG 0.623182 8_1:+81456807 Msa1218800:exon
GAAGGATCCGGAGAGTGACC+CGG 0.627080 8_1:+81457059 Msa1218800:CDS
GTGAACCATCTTGTTGAAGA+CGG 0.627452 8_1:+81457944 Msa1218800:CDS
CCGCGAACCAAACGGAATCG+CGG 0.633717 8_1:+81456849 Msa1218800:CDS
TGGCCGTAAGAGATACCTCA+CGG 0.641591 8_1:-81457883 None:intergenic
GCTAACTCGTGCAATGAACG+TGG 0.642463 8_1:+81456906 Msa1218800:CDS
GGCCGTAAGAGATACCTCAC+GGG 0.650157 8_1:-81457882 None:intergenic
TTGAAGTGCGTGATGCGCAA+GGG 0.655574 8_1:-81456701 None:intergenic
GTGTACGAAATTTAGGAGAG+GGG 0.658085 8_1:+81458627 Msa1218800:intron
ATAGTCAAGACATGGTGTTG+AGG 0.659522 8_1:+81458014 Msa1218800:CDS
ACCCGGTTGTGCAAATGGAG+CGG 0.671005 8_1:+81457076 Msa1218800:CDS
GTTAGCGAGTTAAGAGAACC+GGG 0.676058 8_1:-81456889 None:intergenic
GCGAGTTAAGAGAACCGGGA+CGG 0.686101 8_1:-81456885 None:intergenic
CGAACCAAACGGAATCGCGG+TGG 0.692597 8_1:+81456852 Msa1218800:CDS
AGGAGTAAATAAAGCCCGTG+AGG 0.700718 8_1:+81457868 Msa1218800:CDS
CTATTATAAAGGAATGACGA+AGG 0.717382 8_1:+81458656 Msa1218800:CDS
GGCCACGCCATTGACCGCAG+AGG 0.747510 8_1:+81457901 Msa1218800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAAATTAGAAATAAAAA+AGG - chr8_1:81457236-81457255 None:intergenic 10.0%
!! ACTAAAATTAGAAATAAAAA+AGG - chr8_1:81457236-81457255 None:intergenic 10.0%
!! AATTTAATCTAAAAAAGCAA+AGG - chr8_1:81457749-81457768 None:intergenic 15.0%
!!! TTTTTTTAAAGATTAGTTGT+CGG + chr8_1:81457775-81457794 Msa1218800:intron 15.0%
!!! TCTGTTTTTTTTTTTTTTTG+AGG + chr8_1:81458902-81458921 Msa1218800:three_prime_UTR 15.0%
!!! CTGTTTTTTTTTTTTTTTGA+GGG + chr8_1:81458903-81458922 Msa1218800:three_prime_UTR 15.0%
!!! TGTTTTTTTTTTTTTTTGAG+GGG + chr8_1:81458904-81458923 Msa1218800:three_prime_UTR 15.0%
!! AATTTAATCTAAAAAAGCAA+AGG - chr8_1:81457749-81457768 None:intergenic 15.0%
!!! TTTTTTTAAAGATTAGTTGT+CGG + chr8_1:81457775-81457794 Msa1218800:intron 15.0%
!!! TCTGTTTTTTTTTTTTTTTG+AGG + chr8_1:81458902-81458921 Msa1218800:three_prime_UTR 15.0%
!!! CTGTTTTTTTTTTTTTTTGA+GGG + chr8_1:81458903-81458922 Msa1218800:three_prime_UTR 15.0%
!!! TGTTTTTTTTTTTTTTTGAG+GGG + chr8_1:81458904-81458923 Msa1218800:three_prime_UTR 15.0%
!!! TGTTTTTCACTAACTTATAA+CGG - chr8_1:81457541-81457560 None:intergenic 20.0%
!!! TTTTTTAAAGATTAGTTGTC+GGG + chr8_1:81457776-81457795 Msa1218800:intron 20.0%
!! AAGCTTAAAATGCAAATATA+AGG - chr8_1:81458554-81458573 None:intergenic 20.0%
!!! ATAACAAGGAACTTTTATTA+GGG - chr8_1:81458870-81458889 None:intergenic 20.0%
!!! GAACATTTAATTTGATAACA+AGG - chr8_1:81458884-81458903 None:intergenic 20.0%
!!! TGTTTTTCACTAACTTATAA+CGG - chr8_1:81457541-81457560 None:intergenic 20.0%
!!! TTTTTTAAAGATTAGTTGTC+GGG + chr8_1:81457776-81457795 Msa1218800:intron 20.0%
!! AAGCTTAAAATGCAAATATA+AGG - chr8_1:81458554-81458573 None:intergenic 20.0%
!!! ATAACAAGGAACTTTTATTA+GGG - chr8_1:81458870-81458889 None:intergenic 20.0%
!!! GAACATTTAATTTGATAACA+AGG - chr8_1:81458884-81458903 None:intergenic 20.0%
!!! GTTATTTTGTTCGTTTGTTT+TGG - chr8_1:81456753-81456772 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr8_1:81457422-81457441 Msa1218800:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr8_1:81457423-81457442 Msa1218800:intron 25.0%
!! TTTTATATTTAAGCCCTGTT+TGG - chr8_1:81457439-81457458 None:intergenic 25.0%
! CCATACAATCAAAGTTATAA+CGG - chr8_1:81457597-81457616 None:intergenic 25.0%
! AAGTGAAATAGAGATATCTA+TGG - chr8_1:81457692-81457711 None:intergenic 25.0%
!! TTTTTAACACACTAATGCTA+CGG - chr8_1:81458110-81458129 None:intergenic 25.0%
! ACGCATATCATTACATAATA+TGG + chr8_1:81458151-81458170 Msa1218800:intron 25.0%
! AATTTCTCAGCAAATTATGT+AGG + chr8_1:81458178-81458197 Msa1218800:intron 25.0%
! ATTTCTCAGCAAATTATGTA+GGG + chr8_1:81458179-81458198 Msa1218800:intron 25.0%
! ACAATGATGAAGTTCATAAA+AGG - chr8_1:81458235-81458254 None:intergenic 25.0%
! GAACTTCATCATTGTAATTT+AGG + chr8_1:81458240-81458259 Msa1218800:intron 25.0%
!!! AGCATAGTTGATAGAAATAA+AGG + chr8_1:81458339-81458358 Msa1218800:intron 25.0%
!!! GCATAGTTGATAGAAATAAA+GGG + chr8_1:81458340-81458359 Msa1218800:intron 25.0%
! AAAACTGTAGTTTATAACAC+TGG + chr8_1:81458416-81458435 Msa1218800:intron 25.0%
! AAGGATGAAAATATATGCAA+AGG - chr8_1:81458535-81458554 None:intergenic 25.0%
! CAAATAAAAGACCTATAGTT+TGG - chr8_1:81458736-81458755 None:intergenic 25.0%
!! TAACAAGGAACTTTTATTAG+GGG - chr8_1:81458869-81458888 None:intergenic 25.0%
!! GATAACAAGGAACTTTTATT+AGG - chr8_1:81458871-81458890 None:intergenic 25.0%
!!! GTTATTTTGTTCGTTTGTTT+TGG - chr8_1:81456753-81456772 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr8_1:81457422-81457441 Msa1218800:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr8_1:81457423-81457442 Msa1218800:intron 25.0%
!! TTTTATATTTAAGCCCTGTT+TGG - chr8_1:81457439-81457458 None:intergenic 25.0%
! CCATACAATCAAAGTTATAA+CGG - chr8_1:81457597-81457616 None:intergenic 25.0%
! AAGTGAAATAGAGATATCTA+TGG - chr8_1:81457692-81457711 None:intergenic 25.0%
!! TTTTTAACACACTAATGCTA+CGG - chr8_1:81458110-81458129 None:intergenic 25.0%
! ACGCATATCATTACATAATA+TGG + chr8_1:81458151-81458170 Msa1218800:intron 25.0%
! AATTTCTCAGCAAATTATGT+AGG + chr8_1:81458178-81458197 Msa1218800:intron 25.0%
! ATTTCTCAGCAAATTATGTA+GGG + chr8_1:81458179-81458198 Msa1218800:intron 25.0%
! ACAATGATGAAGTTCATAAA+AGG - chr8_1:81458235-81458254 None:intergenic 25.0%
! GAACTTCATCATTGTAATTT+AGG + chr8_1:81458240-81458259 Msa1218800:intron 25.0%
!!! AGCATAGTTGATAGAAATAA+AGG + chr8_1:81458339-81458358 Msa1218800:intron 25.0%
!!! GCATAGTTGATAGAAATAAA+GGG + chr8_1:81458340-81458359 Msa1218800:intron 25.0%
! AAAACTGTAGTTTATAACAC+TGG + chr8_1:81458416-81458435 Msa1218800:intron 25.0%
! AAGGATGAAAATATATGCAA+AGG - chr8_1:81458535-81458554 None:intergenic 25.0%
! CAAATAAAAGACCTATAGTT+TGG - chr8_1:81458736-81458755 None:intergenic 25.0%
!! TAACAAGGAACTTTTATTAG+GGG - chr8_1:81458869-81458888 None:intergenic 25.0%
!! GATAACAAGGAACTTTTATT+AGG - chr8_1:81458871-81458890 None:intergenic 25.0%
!!! GTTCGTTTGTTTTGGAATAT+GGG - chr8_1:81456745-81456764 None:intergenic 30.0%
!!! TGTTCGTTTGTTTTGGAATA+TGG - chr8_1:81456746-81456765 None:intergenic 30.0%
CCGTTATAACTTTGATTGTA+TGG + chr8_1:81457594-81457613 Msa1218800:intron 30.0%
! ATTTGGGATATTTCCTTCAT+GGG + chr8_1:81457817-81457836 Msa1218800:CDS 30.0%
TACAAGTCAGTGATAAATGA+TGG + chr8_1:81458037-81458056 Msa1218800:CDS 30.0%
! AGGAATGATTAATGGCTTTA+TGG - chr8_1:81458210-81458229 None:intergenic 30.0%
AAAAGGACAGGAATGATTAA+TGG - chr8_1:81458218-81458237 None:intergenic 30.0%
TAGTAGTTATGTAGCATGAT+TGG + chr8_1:81458440-81458459 Msa1218800:intron 30.0%
TCATTCCTTTATAATAGGCA+TGG - chr8_1:81458653-81458672 None:intergenic 30.0%
CTTCGTCATTCCTTTATAAT+AGG - chr8_1:81458658-81458677 None:intergenic 30.0%
CTATTATAAAGGAATGACGA+AGG + chr8_1:81458656-81458675 Msa1218800:CDS 30.0%
ATCTTTACAGTTTCAGAGAT+TGG - chr8_1:81458761-81458780 None:intergenic 30.0%
AGCAGACAATGTTTATCATA+TGG + chr8_1:81458834-81458853 Msa1218800:three_prime_UTR 30.0%
! AACAAGGAACTTTTATTAGG+GGG - chr8_1:81458868-81458887 None:intergenic 30.0%
! TTCTGCATTATTTTCTCACA+GGG - chr8_1:81458989-81459008 None:intergenic 30.0%
!!! GTTCGTTTGTTTTGGAATAT+GGG - chr8_1:81456745-81456764 None:intergenic 30.0%
!!! TGTTCGTTTGTTTTGGAATA+TGG - chr8_1:81456746-81456765 None:intergenic 30.0%
CCGTTATAACTTTGATTGTA+TGG + chr8_1:81457594-81457613 Msa1218800:intron 30.0%
! ATTTGGGATATTTCCTTCAT+GGG + chr8_1:81457817-81457836 Msa1218800:CDS 30.0%
TACAAGTCAGTGATAAATGA+TGG + chr8_1:81458037-81458056 Msa1218800:CDS 30.0%
! AGGAATGATTAATGGCTTTA+TGG - chr8_1:81458210-81458229 None:intergenic 30.0%
AAAAGGACAGGAATGATTAA+TGG - chr8_1:81458218-81458237 None:intergenic 30.0%
TAGTAGTTATGTAGCATGAT+TGG + chr8_1:81458440-81458459 Msa1218800:intron 30.0%
TCATTCCTTTATAATAGGCA+TGG - chr8_1:81458653-81458672 None:intergenic 30.0%
CTTCGTCATTCCTTTATAAT+AGG - chr8_1:81458658-81458677 None:intergenic 30.0%
CTATTATAAAGGAATGACGA+AGG + chr8_1:81458656-81458675 Msa1218800:CDS 30.0%
ATCTTTACAGTTTCAGAGAT+TGG - chr8_1:81458761-81458780 None:intergenic 30.0%
AGCAGACAATGTTTATCATA+TGG + chr8_1:81458834-81458853 Msa1218800:three_prime_UTR 30.0%
! AACAAGGAACTTTTATTAGG+GGG - chr8_1:81458868-81458887 None:intergenic 30.0%
! TTCTGCATTATTTTCTCACA+GGG - chr8_1:81458989-81459008 None:intergenic 30.0%
AAGCTTTCAAGAATCTAGAC+CGG + chr8_1:81456938-81456957 Msa1218800:CDS 35.0%
GTTCGGGTGATTATATTAAC+CGG + chr8_1:81456970-81456989 Msa1218800:CDS 35.0%
GGTGATTATATTAACCGGAA+CGG + chr8_1:81456975-81456994 Msa1218800:CDS 35.0%
GTGATTATATTAACCGGAAC+GGG + chr8_1:81456976-81456995 Msa1218800:CDS 35.0%
CCTTTAATCGCTCCAATTAT+CGG - chr8_1:81457111-81457130 None:intergenic 35.0%
!!! GATATTTTGGTTGCTGCTAA+AGG + chr8_1:81457171-81457190 Msa1218800:CDS 35.0%
! AAAGCGCTAACAAATAGTAG+TGG - chr8_1:81457634-81457653 None:intergenic 35.0%
! ACTACTATTTGTTAGCGCTT+TGG + chr8_1:81457633-81457652 Msa1218800:intron 35.0%
TTGTTGGGTATATGCAGATT+TGG + chr8_1:81457800-81457819 Msa1218800:intron 35.0%
TGTTGGGTATATGCAGATTT+GGG + chr8_1:81457801-81457820 Msa1218800:intron 35.0%
! GATTTGGGATATTTCCTTCA+TGG + chr8_1:81457816-81457835 Msa1218800:intron 35.0%
! TTTGGGATATTTCCTTCATG+GGG + chr8_1:81457818-81457837 Msa1218800:CDS 35.0%
!! GTCTTGACTATTTTTCGCAA+TGG - chr8_1:81458005-81458024 None:intergenic 35.0%
TGCGAAAAATAGTCAAGACA+TGG + chr8_1:81458006-81458025 Msa1218800:CDS 35.0%
GATGAAGTTCATAAAAGGAC+AGG - chr8_1:81458230-81458249 None:intergenic 35.0%
TCTACCTGTGTACGAAATTT+AGG + chr8_1:81458620-81458639 Msa1218800:intron 35.0%
TGTGTACGAAATTTAGGAGA+GGG + chr8_1:81458626-81458645 Msa1218800:intron 35.0%
AAAATGCAGGAATTCATAGC+AGG + chr8_1:81458690-81458709 Msa1218800:CDS 35.0%
! CTATAGTTTGGACTGTTTCT+TGG - chr8_1:81458724-81458743 None:intergenic 35.0%
CAAGAAACAGTCCAAACTAT+AGG + chr8_1:81458722-81458741 Msa1218800:CDS 35.0%
!!! TGTTTTGTTTCTCAGAGTTG+AGG + chr8_1:81458784-81458803 Msa1218800:three_prime_UTR 35.0%
! TTCTCAGAGTTGAGGTTTTA+TGG + chr8_1:81458792-81458811 Msa1218800:three_prime_UTR 35.0%
!! TCTCAGAGTTGAGGTTTTAT+GGG + chr8_1:81458793-81458812 Msa1218800:three_prime_UTR 35.0%
! TCTGCATTATTTTCTCACAG+GGG - chr8_1:81458988-81459007 None:intergenic 35.0%
! GTTCTGCATTATTTTCTCAC+AGG - chr8_1:81458990-81459009 None:intergenic 35.0%
AAGCTTTCAAGAATCTAGAC+CGG + chr8_1:81456938-81456957 Msa1218800:CDS 35.0%
GTTCGGGTGATTATATTAAC+CGG + chr8_1:81456970-81456989 Msa1218800:CDS 35.0%
GGTGATTATATTAACCGGAA+CGG + chr8_1:81456975-81456994 Msa1218800:CDS 35.0%
GTGATTATATTAACCGGAAC+GGG + chr8_1:81456976-81456995 Msa1218800:CDS 35.0%
CCTTTAATCGCTCCAATTAT+CGG - chr8_1:81457111-81457130 None:intergenic 35.0%
!!! GATATTTTGGTTGCTGCTAA+AGG + chr8_1:81457171-81457190 Msa1218800:CDS 35.0%
! AAAGCGCTAACAAATAGTAG+TGG - chr8_1:81457634-81457653 None:intergenic 35.0%
! ACTACTATTTGTTAGCGCTT+TGG + chr8_1:81457633-81457652 Msa1218800:intron 35.0%
TTGTTGGGTATATGCAGATT+TGG + chr8_1:81457800-81457819 Msa1218800:intron 35.0%
TGTTGGGTATATGCAGATTT+GGG + chr8_1:81457801-81457820 Msa1218800:intron 35.0%
! GATTTGGGATATTTCCTTCA+TGG + chr8_1:81457816-81457835 Msa1218800:intron 35.0%
! TTTGGGATATTTCCTTCATG+GGG + chr8_1:81457818-81457837 Msa1218800:CDS 35.0%
!! GTCTTGACTATTTTTCGCAA+TGG - chr8_1:81458005-81458024 None:intergenic 35.0%
TGCGAAAAATAGTCAAGACA+TGG + chr8_1:81458006-81458025 Msa1218800:CDS 35.0%
GATGAAGTTCATAAAAGGAC+AGG - chr8_1:81458230-81458249 None:intergenic 35.0%
TCTACCTGTGTACGAAATTT+AGG + chr8_1:81458620-81458639 Msa1218800:intron 35.0%
TGTGTACGAAATTTAGGAGA+GGG + chr8_1:81458626-81458645 Msa1218800:intron 35.0%
AAAATGCAGGAATTCATAGC+AGG + chr8_1:81458690-81458709 Msa1218800:CDS 35.0%
! CTATAGTTTGGACTGTTTCT+TGG - chr8_1:81458724-81458743 None:intergenic 35.0%
CAAGAAACAGTCCAAACTAT+AGG + chr8_1:81458722-81458741 Msa1218800:CDS 35.0%
!!! TGTTTTGTTTCTCAGAGTTG+AGG + chr8_1:81458784-81458803 Msa1218800:three_prime_UTR 35.0%
! TTCTCAGAGTTGAGGTTTTA+TGG + chr8_1:81458792-81458811 Msa1218800:three_prime_UTR 35.0%
!! TCTCAGAGTTGAGGTTTTAT+GGG + chr8_1:81458793-81458812 Msa1218800:three_prime_UTR 35.0%
! TCTGCATTATTTTCTCACAG+GGG - chr8_1:81458988-81459007 None:intergenic 35.0%
! GTTCTGCATTATTTTCTCAC+AGG - chr8_1:81458990-81459009 None:intergenic 35.0%
!! GTTCAGTTGCTACTTTGATC+TGG - chr8_1:81456775-81456794 None:intergenic 40.0%
GATCAAAGTAGCAACTGAAC+CGG + chr8_1:81456775-81456794 Msa1218800:five_prime_UTR 40.0%
TGAACCGGACAAAATCGAAT+CGG + chr8_1:81456790-81456809 Msa1218800:five_prime_UTR 40.0%
AGTTAGCGAGTTAAGAGAAC+CGG - chr8_1:81456893-81456912 None:intergenic 40.0%
AGCTTTCAAGAATCTAGACC+GGG + chr8_1:81456939-81456958 Msa1218800:CDS 40.0%
!! TGTTTTCAAGGGTGATGTGA+AGG + chr8_1:81457041-81457060 Msa1218800:CDS 40.0%
CCGATAATTGGAGCGATTAA+AGG + chr8_1:81457108-81457127 Msa1218800:CDS 40.0%
! TGCGCTTGCTTGTGATATTT+TGG + chr8_1:81457158-81457177 Msa1218800:CDS 40.0%
TGCTAAAGGAGCCAAATTCA+TGG + chr8_1:81457185-81457204 Msa1218800:CDS 40.0%
AGCATGAGTGTCCATGAATT+TGG - chr8_1:81457199-81457218 None:intergenic 40.0%
AATTCATGGACACTCATGCT+AGG + chr8_1:81457199-81457218 Msa1218800:CDS 40.0%
! AGATTAGTTGTCGGGATTGT+TGG + chr8_1:81457784-81457803 Msa1218800:intron 40.0%
! GATTAGTTGTCGGGATTGTT+GGG + chr8_1:81457785-81457804 Msa1218800:intron 40.0%
GTGAACCATCTTGTTGAAGA+CGG + chr8_1:81457944-81457963 Msa1218800:CDS 40.0%
! ATAGTCAAGACATGGTGTTG+AGG + chr8_1:81458014-81458033 Msa1218800:CDS 40.0%
GATAAATGATGGCATCAAGC+TGG + chr8_1:81458048-81458067 Msa1218800:CDS 40.0%
CTCTCCTAAATTTCGTACAC+AGG - chr8_1:81458627-81458646 None:intergenic 40.0%
CTGTGTACGAAATTTAGGAG+AGG + chr8_1:81458625-81458644 Msa1218800:intron 40.0%
GTGTACGAAATTTAGGAGAG+GGG + chr8_1:81458627-81458646 Msa1218800:intron 40.0%
GGAGCAATTCAAGAAAATGC+AGG + chr8_1:81458677-81458696 Msa1218800:CDS 40.0%
!! GTTCAGTTGCTACTTTGATC+TGG - chr8_1:81456775-81456794 None:intergenic 40.0%
GATCAAAGTAGCAACTGAAC+CGG + chr8_1:81456775-81456794 Msa1218800:five_prime_UTR 40.0%
TGAACCGGACAAAATCGAAT+CGG + chr8_1:81456790-81456809 Msa1218800:five_prime_UTR 40.0%
AGTTAGCGAGTTAAGAGAAC+CGG - chr8_1:81456893-81456912 None:intergenic 40.0%
AGCTTTCAAGAATCTAGACC+GGG + chr8_1:81456939-81456958 Msa1218800:CDS 40.0%
!! TGTTTTCAAGGGTGATGTGA+AGG + chr8_1:81457041-81457060 Msa1218800:CDS 40.0%
CCGATAATTGGAGCGATTAA+AGG + chr8_1:81457108-81457127 Msa1218800:CDS 40.0%
! TGCGCTTGCTTGTGATATTT+TGG + chr8_1:81457158-81457177 Msa1218800:CDS 40.0%
TGCTAAAGGAGCCAAATTCA+TGG + chr8_1:81457185-81457204 Msa1218800:CDS 40.0%
AGCATGAGTGTCCATGAATT+TGG - chr8_1:81457199-81457218 None:intergenic 40.0%
AATTCATGGACACTCATGCT+AGG + chr8_1:81457199-81457218 Msa1218800:CDS 40.0%
! AGATTAGTTGTCGGGATTGT+TGG + chr8_1:81457784-81457803 Msa1218800:intron 40.0%
! GATTAGTTGTCGGGATTGTT+GGG + chr8_1:81457785-81457804 Msa1218800:intron 40.0%
GTGAACCATCTTGTTGAAGA+CGG + chr8_1:81457944-81457963 Msa1218800:CDS 40.0%
! ATAGTCAAGACATGGTGTTG+AGG + chr8_1:81458014-81458033 Msa1218800:CDS 40.0%
GATAAATGATGGCATCAAGC+TGG + chr8_1:81458048-81458067 Msa1218800:CDS 40.0%
CTCTCCTAAATTTCGTACAC+AGG - chr8_1:81458627-81458646 None:intergenic 40.0%
CTGTGTACGAAATTTAGGAG+AGG + chr8_1:81458625-81458644 Msa1218800:intron 40.0%
GTGTACGAAATTTAGGAGAG+GGG + chr8_1:81458627-81458646 Msa1218800:intron 40.0%
GGAGCAATTCAAGAAAATGC+AGG + chr8_1:81458677-81458696 Msa1218800:CDS 40.0%
GAACCGGACAAAATCGAATC+GGG + chr8_1:81456791-81456810 Msa1218800:five_prime_UTR 45.0%
AATCGGGTCGAACATGACAT+CGG + chr8_1:81456807-81456826 Msa1218800:exon 45.0%
GTTAGCGAGTTAAGAGAACC+GGG - chr8_1:81456892-81456911 None:intergenic 45.0%
GATTCTTGAAAGCTTGAGCC+AGG - chr8_1:81456933-81456952 None:intergenic 45.0%
!! CGGTGTCGTAAACCGATAAT+TGG + chr8_1:81457096-81457115 Msa1218800:CDS 45.0%
AAAGGATTCGCTGTTACAGC+TGG + chr8_1:81457126-81457145 Msa1218800:CDS 45.0%
!! TTCTGAGACAAACCCCATGA+AGG - chr8_1:81457833-81457852 None:intergenic 45.0%
AGGAGTAAATAAAGCCCGTG+AGG + chr8_1:81457868-81457887 Msa1218800:CDS 45.0%
GTTCACCGTCTTCAACAAGA+TGG - chr8_1:81457952-81457971 None:intergenic 45.0%
! TACGGCACTAACCTTTTCGA+GGG - chr8_1:81458092-81458111 None:intergenic 45.0%
AGGGGCCATGCCTATTATAA+AGG + chr8_1:81458645-81458664 Msa1218800:CDS 45.0%
GAACCGGACAAAATCGAATC+GGG + chr8_1:81456791-81456810 Msa1218800:five_prime_UTR 45.0%
AATCGGGTCGAACATGACAT+CGG + chr8_1:81456807-81456826 Msa1218800:exon 45.0%
GTTAGCGAGTTAAGAGAACC+GGG - chr8_1:81456892-81456911 None:intergenic 45.0%
GATTCTTGAAAGCTTGAGCC+AGG - chr8_1:81456933-81456952 None:intergenic 45.0%
!! CGGTGTCGTAAACCGATAAT+TGG + chr8_1:81457096-81457115 Msa1218800:CDS 45.0%
AAAGGATTCGCTGTTACAGC+TGG + chr8_1:81457126-81457145 Msa1218800:CDS 45.0%
!! TTCTGAGACAAACCCCATGA+AGG - chr8_1:81457833-81457852 None:intergenic 45.0%
AGGAGTAAATAAAGCCCGTG+AGG + chr8_1:81457868-81457887 Msa1218800:CDS 45.0%
GTTCACCGTCTTCAACAAGA+TGG - chr8_1:81457952-81457971 None:intergenic 45.0%
! TACGGCACTAACCTTTTCGA+GGG - chr8_1:81458092-81458111 None:intergenic 45.0%
AGGGGCCATGCCTATTATAA+AGG + chr8_1:81458645-81458664 Msa1218800:CDS 45.0%
!!! ATCATTTATTTTTTTTTTAA+GGG - chr8_1:81457357-81457376 None:intergenic 5.0%
!!! TATCATTTATTTTTTTTTTA+AGG - chr8_1:81457358-81457377 None:intergenic 5.0%
!!! ATCATTTATTTTTTTTTTAA+GGG - chr8_1:81457357-81457376 None:intergenic 5.0%
!!! TATCATTTATTTTTTTTTTA+AGG - chr8_1:81457358-81457377 None:intergenic 5.0%
! TGATGCGCAAGGGTATGGTA+AGG - chr8_1:81456694-81456713 None:intergenic 50.0%
TTGAAGTGCGTGATGCGCAA+GGG - chr8_1:81456704-81456723 None:intergenic 50.0%
!! CGACCCGATTCGATTTTGTC+CGG - chr8_1:81456797-81456816 None:intergenic 50.0%
GTGGTGACTATTAACCGTCC+CGG + chr8_1:81456871-81456890 Msa1218800:CDS 50.0%
GCTAACTCGTGCAATGAACG+TGG + chr8_1:81456906-81456925 Msa1218800:CDS 50.0%
GAATCTAGACCGGGACGAAT+CGG + chr8_1:81456948-81456967 Msa1218800:CDS 50.0%
ACAGAACGATCTACCCGTTC+CGG - chr8_1:81456992-81457011 None:intergenic 50.0%
ACGGGTAGATCGTTCTGTTC+CGG + chr8_1:81456994-81457013 Msa1218800:CDS 50.0%
! GCAGCGGAGGATGTTTTCAA+GGG + chr8_1:81457030-81457049 Msa1218800:CDS 50.0%
CAAGGGTGATGTGAAGGATC+CGG + chr8_1:81457047-81457066 Msa1218800:CDS 50.0%
CAGCTACGAACGTGACTAGT+TGG + chr8_1:81457319-81457338 Msa1218800:intron 50.0%
CAGAAGTTGTCGCGCATCAT+AGG + chr8_1:81457848-81457867 Msa1218800:CDS 50.0%
! AGCCCGTGAGGTATCTCTTA+CGG + chr8_1:81457880-81457899 Msa1218800:CDS 50.0%
TGGCCGTAAGAGATACCTCA+CGG - chr8_1:81457886-81457905 None:intergenic 50.0%
! CAACTTTTCAGCCACCTCTG+CGG - chr8_1:81457918-81457937 None:intergenic 50.0%
GCAGAGGTGGCTGAAAAGTT+GGG + chr8_1:81457917-81457936 Msa1218800:CDS 50.0%
GGTGGCTGAAAAGTTGGGTT+TGG + chr8_1:81457922-81457941 Msa1218800:CDS 50.0%
GATGGCATCAAGCTGGATCT+TGG + chr8_1:81458055-81458074 Msa1218800:CDS 50.0%
!! CCTTTTCGAGGGAAAGAGCA+TGG - chr8_1:81458081-81458100 None:intergenic 50.0%
CCATGCTCTTTCCCTCGAAA+AGG + chr8_1:81458078-81458097 Msa1218800:CDS 50.0%
! CTACGGCACTAACCTTTTCG+AGG - chr8_1:81458093-81458112 None:intergenic 50.0%
! TGATGCGCAAGGGTATGGTA+AGG - chr8_1:81456694-81456713 None:intergenic 50.0%
TTGAAGTGCGTGATGCGCAA+GGG - chr8_1:81456704-81456723 None:intergenic 50.0%
!! CGACCCGATTCGATTTTGTC+CGG - chr8_1:81456797-81456816 None:intergenic 50.0%
GTGGTGACTATTAACCGTCC+CGG + chr8_1:81456871-81456890 Msa1218800:CDS 50.0%
GCTAACTCGTGCAATGAACG+TGG + chr8_1:81456906-81456925 Msa1218800:CDS 50.0%
GAATCTAGACCGGGACGAAT+CGG + chr8_1:81456948-81456967 Msa1218800:CDS 50.0%
ACAGAACGATCTACCCGTTC+CGG - chr8_1:81456992-81457011 None:intergenic 50.0%
ACGGGTAGATCGTTCTGTTC+CGG + chr8_1:81456994-81457013 Msa1218800:CDS 50.0%
! GCAGCGGAGGATGTTTTCAA+GGG + chr8_1:81457030-81457049 Msa1218800:CDS 50.0%
CAAGGGTGATGTGAAGGATC+CGG + chr8_1:81457047-81457066 Msa1218800:CDS 50.0%
CAGCTACGAACGTGACTAGT+TGG + chr8_1:81457319-81457338 Msa1218800:intron 50.0%
CAGAAGTTGTCGCGCATCAT+AGG + chr8_1:81457848-81457867 Msa1218800:CDS 50.0%
! AGCCCGTGAGGTATCTCTTA+CGG + chr8_1:81457880-81457899 Msa1218800:CDS 50.0%
TGGCCGTAAGAGATACCTCA+CGG - chr8_1:81457886-81457905 None:intergenic 50.0%
! CAACTTTTCAGCCACCTCTG+CGG - chr8_1:81457918-81457937 None:intergenic 50.0%
GCAGAGGTGGCTGAAAAGTT+GGG + chr8_1:81457917-81457936 Msa1218800:CDS 50.0%
GGTGGCTGAAAAGTTGGGTT+TGG + chr8_1:81457922-81457941 Msa1218800:CDS 50.0%
GATGGCATCAAGCTGGATCT+TGG + chr8_1:81458055-81458074 Msa1218800:CDS 50.0%
!! CCTTTTCGAGGGAAAGAGCA+TGG - chr8_1:81458081-81458100 None:intergenic 50.0%
CCATGCTCTTTCCCTCGAAA+AGG + chr8_1:81458078-81458097 Msa1218800:CDS 50.0%
! CTACGGCACTAACCTTTTCG+AGG - chr8_1:81458093-81458112 None:intergenic 50.0%
GTTGAAGTGCGTGATGCGCA+AGG - chr8_1:81456705-81456724 None:intergenic 55.0%
CTCGTCAACCGCGAACCAAA+CGG + chr8_1:81456841-81456860 Msa1218800:CDS 55.0%
GCGAGTTAAGAGAACCGGGA+CGG - chr8_1:81456888-81456907 None:intergenic 55.0%
TCGTGCAATGAACGTGGACC+TGG + chr8_1:81456912-81456931 Msa1218800:CDS 55.0%
TAGACCGGGACGAATCGGTT+CGG + chr8_1:81456953-81456972 Msa1218800:CDS 55.0%
!! CTGTTCCGGCGTTGACCTTA+CGG + chr8_1:81457008-81457027 Msa1218800:CDS 55.0%
AAACATCCTCCGCTGCCGTA+AGG - chr8_1:81457026-81457045 None:intergenic 55.0%
! GGCAGCGGAGGATGTTTTCA+AGG + chr8_1:81457029-81457048 Msa1218800:CDS 55.0%
GAGTGACCCGGTTGTGCAAA+TGG + chr8_1:81457071-81457090 Msa1218800:CDS 55.0%
ACCCGGTTGTGCAAATGGAG+CGG + chr8_1:81457076-81457095 Msa1218800:CDS 55.0%
ACCGCTCCATTTGCACAACC+GGG - chr8_1:81457080-81457099 None:intergenic 55.0%
CACCGCTCCATTTGCACAAC+CGG - chr8_1:81457081-81457100 None:intergenic 55.0%
GGCCGTAAGAGATACCTCAC+GGG - chr8_1:81457885-81457904 None:intergenic 55.0%
CGCAGAGGTGGCTGAAAAGT+TGG + chr8_1:81457916-81457935 Msa1218800:CDS 55.0%
GTTGAAGTGCGTGATGCGCA+AGG - chr8_1:81456705-81456724 None:intergenic 55.0%
CTCGTCAACCGCGAACCAAA+CGG + chr8_1:81456841-81456860 Msa1218800:CDS 55.0%
GCGAGTTAAGAGAACCGGGA+CGG - chr8_1:81456888-81456907 None:intergenic 55.0%
TCGTGCAATGAACGTGGACC+TGG + chr8_1:81456912-81456931 Msa1218800:CDS 55.0%
TAGACCGGGACGAATCGGTT+CGG + chr8_1:81456953-81456972 Msa1218800:CDS 55.0%
!! CTGTTCCGGCGTTGACCTTA+CGG + chr8_1:81457008-81457027 Msa1218800:CDS 55.0%
AAACATCCTCCGCTGCCGTA+AGG - chr8_1:81457026-81457045 None:intergenic 55.0%
! GGCAGCGGAGGATGTTTTCA+AGG + chr8_1:81457029-81457048 Msa1218800:CDS 55.0%
GAGTGACCCGGTTGTGCAAA+TGG + chr8_1:81457071-81457090 Msa1218800:CDS 55.0%
ACCCGGTTGTGCAAATGGAG+CGG + chr8_1:81457076-81457095 Msa1218800:CDS 55.0%
ACCGCTCCATTTGCACAACC+GGG - chr8_1:81457080-81457099 None:intergenic 55.0%
CACCGCTCCATTTGCACAAC+CGG - chr8_1:81457081-81457100 None:intergenic 55.0%
GGCCGTAAGAGATACCTCAC+GGG - chr8_1:81457885-81457904 None:intergenic 55.0%
CGCAGAGGTGGCTGAAAAGT+TGG + chr8_1:81457916-81457935 Msa1218800:CDS 55.0%
GTGCGTGATGCGCAAGGGTA+TGG - chr8_1:81456699-81456718 None:intergenic 60.0%
! CCGCGATTCCGTTTGGTTCG+CGG - chr8_1:81456852-81456871 None:intergenic 60.0%
CCGCGAACCAAACGGAATCG+CGG + chr8_1:81456849-81456868 Msa1218800:CDS 60.0%
CGAACCAAACGGAATCGCGG+TGG + chr8_1:81456852-81456871 Msa1218800:CDS 60.0%
GTCACCACCGCGATTCCGTT+TGG - chr8_1:81456859-81456878 None:intergenic 60.0%
! AGACCGGGACGAATCGGTTC+GGG + chr8_1:81456954-81456973 Msa1218800:CDS 60.0%
!! TCACCCGAACCGATTCGTCC+CGG - chr8_1:81456960-81456979 None:intergenic 60.0%
GAAGGATCCGGAGAGTGACC+CGG + chr8_1:81457059-81457078 Msa1218800:CDS 60.0%
TGCACAACCGGGTCACTCTC+CGG - chr8_1:81457069-81457088 None:intergenic 60.0%
TCAGCCACCTCTGCGGTCAA+TGG - chr8_1:81457911-81457930 None:intergenic 60.0%
GTGCGTGATGCGCAAGGGTA+TGG - chr8_1:81456699-81456718 None:intergenic 60.0%
! CCGCGATTCCGTTTGGTTCG+CGG - chr8_1:81456852-81456871 None:intergenic 60.0%
CCGCGAACCAAACGGAATCG+CGG + chr8_1:81456849-81456868 Msa1218800:CDS 60.0%
CGAACCAAACGGAATCGCGG+TGG + chr8_1:81456852-81456871 Msa1218800:CDS 60.0%
GTCACCACCGCGATTCCGTT+TGG - chr8_1:81456859-81456878 None:intergenic 60.0%
! AGACCGGGACGAATCGGTTC+GGG + chr8_1:81456954-81456973 Msa1218800:CDS 60.0%
!! TCACCCGAACCGATTCGTCC+CGG - chr8_1:81456960-81456979 None:intergenic 60.0%
GAAGGATCCGGAGAGTGACC+CGG + chr8_1:81457059-81457078 Msa1218800:CDS 60.0%
TGCACAACCGGGTCACTCTC+CGG - chr8_1:81457069-81457088 None:intergenic 60.0%
TCAGCCACCTCTGCGGTCAA+TGG - chr8_1:81457911-81457930 None:intergenic 60.0%
CGCTGCCGTAAGGTCAACGC+CGG - chr8_1:81457016-81457035 None:intergenic 65.0%
!! CGGCGTTGACCTTACGGCAG+CGG + chr8_1:81457014-81457033 Msa1218800:CDS 65.0%
CGTTGACCTTACGGCAGCGG+AGG + chr8_1:81457017-81457036 Msa1218800:CDS 65.0%
CACCTCTGCGGTCAATGGCG+TGG - chr8_1:81457906-81457925 None:intergenic 65.0%
CACGCCATTGACCGCAGAGG+TGG + chr8_1:81457904-81457923 Msa1218800:CDS 65.0%
CGCTGCCGTAAGGTCAACGC+CGG - chr8_1:81457016-81457035 None:intergenic 65.0%
!! CGGCGTTGACCTTACGGCAG+CGG + chr8_1:81457014-81457033 Msa1218800:CDS 65.0%
CGTTGACCTTACGGCAGCGG+AGG + chr8_1:81457017-81457036 Msa1218800:CDS 65.0%
CACCTCTGCGGTCAATGGCG+TGG - chr8_1:81457906-81457925 None:intergenic 65.0%
CACGCCATTGACCGCAGAGG+TGG + chr8_1:81457904-81457923 Msa1218800:CDS 65.0%
GGCCACGCCATTGACCGCAG+AGG + chr8_1:81457901-81457920 Msa1218800:CDS 70.0%
GGCCACGCCATTGACCGCAG+AGG + chr8_1:81457901-81457920 Msa1218800:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 81456665 81459019 81456665 ID=Msa1218800;Name=Msa1218800
chr8_1 mRNA 81456665 81459019 81456665 ID=Msa1218800-mRNA-1;Parent=Msa1218800;Name=Msa1218800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=155|1|1|1|1|1|3|276|261
chr8_1 exon 81456665 81457220 81456665 ID=Msa1218800-mRNA-1:exon:28807;Parent=Msa1218800-mRNA-1
chr8_1 exon 81457817 81458099 81457817 ID=Msa1218800-mRNA-1:exon:28808;Parent=Msa1218800-mRNA-1
chr8_1 exon 81458642 81459019 81458642 ID=Msa1218800-mRNA-1:exon:28809;Parent=Msa1218800-mRNA-1
chr8_1 five_prime_UTR 81456665 81456819 81456665 ID=Msa1218800-mRNA-1:five_prime_utr;Parent=Msa1218800-mRNA-1
chr8_1 CDS 81456820 81457220 81456820 ID=Msa1218800-mRNA-1:cds;Parent=Msa1218800-mRNA-1
chr8_1 CDS 81457817 81458099 81457817 ID=Msa1218800-mRNA-1:cds;Parent=Msa1218800-mRNA-1
chr8_1 CDS 81458642 81458743 81458642 ID=Msa1218800-mRNA-1:cds;Parent=Msa1218800-mRNA-1
chr8_1 three_prime_UTR 81458744 81459019 81458744 ID=Msa1218800-mRNA-1:three_prime_utr;Parent=Msa1218800-mRNA-1
Gene Sequence

>Msa1218800

ATGACATCGGAGAAGCTGATACTCGTCAACCGCGAACCAAACGGAATCGCGGTGGTGACTATTAACCGTCCCGGTTCTCTTAACTCGCTAACTCGTGCAATGAACGTGGACCTGGCTCAAGCTTTCAAGAATCTAGACCGGGACGAATCGGTTCGGGTGATTATATTAACCGGAACGGGTAGATCGTTCTGTTCCGGCGTTGACCTTACGGCAGCGGAGGATGTTTTCAAGGGTGATGTGAAGGATCCGGAGAGTGACCCGGTTGTGCAAATGGAGCGGTGTCGTAAACCGATAATTGGAGCGATTAAAGGATTCGCTGTTACAGCTGGATTTGAGATTGCGCTTGCTTGTGATATTTTGGTTGCTGCTAAAGGAGCCAAATTCATGGACACTCATGCTAGATTTGGGATATTTCCTTCATGGGGTTTGTCTCAGAAGTTGTCGCGCATCATAGGAGTAAATAAAGCCCGTGAGGTATCTCTTACGGCCACGCCATTGACCGCAGAGGTGGCTGAAAAGTTGGGTTTGGTGAACCATCTTGTTGAAGACGGTGAACTGATGAAGAAAAGCAGAGAAATTGCAGAAGCCATTGCGAAAAATAGTCAAGACATGGTGTTGAGGTACAAGTCAGTGATAAATGATGGCATCAAGCTGGATCTTGGCCATGCTCTTTCCCTCGAAAAGGAGAGGGGCCATGCCTATTATAAAGGAATGACGAAGGAGCAATTCAAGAAAATGCAGGAATTCATAGCAGGAAGAAGTTCCAAGAAACAGTCCAAACTATAG
Protein sequence

>Msa1218800

MTSEKLILVNREPNGIAVVTINRPGSLNSLTRAMNVDLAQAFKNLDRDESVRVIILTGTGRSFCSGVDLTAAEDVFKGDVKDPESDPVVQMERCRKPIIGAIKGFAVTAGFEIALACDILVAAKGAKFMDTHARFGIFPSWGLSQKLSRIIGVNKAREVSLTATPLTAEVAEKLGLVNHLVEDGELMKKSREIAEAIAKNSQDMVLRYKSVINDGIKLDLGHALSLEKERGHAYYKGMTKEQFKKMQEFIAGRSSKKQSKL*