Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218160 | XP_003609709.2 | 98.125 | 160 | 3 | 0 | 1 | 160 | 1 | 160 | 6.68e-111 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218160 | sp|P17642|PRS2_SOLTU | 56.875 | 160 | 64 | 3 | 1 | 160 | 1 | 155 | 3.17e-61 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218160 | G7JLL1 | 98.125 | 160 | 3 | 0 | 1 | 160 | 1 | 160 | 3.19e-111 | 322 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa1218160 | 0.860510 | 1.964997e-63 | -8.615850e-47 |
| Msa0004480 | Msa1218160 | 0.897589 | 1.213980e-76 | -8.615850e-47 |
| Msa0005260 | Msa1218160 | 0.821953 | 3.069608e-53 | -8.615850e-47 |
| Msa0011050 | Msa1218160 | 0.803128 | 4.040459e-49 | -8.615850e-47 |
| Msa0026630 | Msa1218160 | 0.812145 | 4.912737e-51 | -8.615850e-47 |
| Msa0043850 | Msa1218160 | 0.844244 | 8.523201e-59 | -8.615850e-47 |
| Msa0052780 | Msa1218160 | 0.836381 | 9.676579e-57 | -8.615850e-47 |
| Msa0059900 | Msa1218160 | 0.823275 | 1.511665e-53 | -8.615850e-47 |
| Msa0061220 | Msa1218160 | 0.848333 | 6.550953e-60 | -8.615850e-47 |
| Msa0071470 | Msa1218160 | 0.811213 | 7.834023e-51 | -8.615850e-47 |
| Msa0071480 | Msa1218160 | 0.801509 | 8.709075e-49 | -8.615850e-47 |
| Msa0077370 | Msa1218160 | 0.829200 | 5.880059e-55 | -8.615850e-47 |
| Msa0082420 | Msa1218160 | 0.818084 | 2.357309e-52 | -8.615850e-47 |
| Msa0090380 | Msa1218160 | 0.894522 | 2.279210e-75 | -8.615850e-47 |
| Msa0090510 | Msa1218160 | 0.828085 | 1.093798e-54 | -8.615850e-47 |
| Msa0094710 | Msa1218160 | 0.806629 | 7.498048e-50 | -8.615850e-47 |
| Msa0097570 | Msa1218160 | 0.844754 | 6.216823e-59 | -8.615850e-47 |
| Msa0104810 | Msa1218160 | 0.855212 | 7.341769e-62 | -8.615850e-47 |
| Msa0119430 | Msa1218160 | 0.824579 | 7.476543e-54 | -8.615850e-47 |
| Msa0119440 | Msa1218160 | 0.810979 | 8.806218e-51 | -8.615850e-47 |
| Msa0604570 | Msa1218160 | 0.816923 | 4.306345e-52 | -8.615850e-47 |
| Msa0611060 | Msa1218160 | 0.844227 | 8.614440e-59 | -8.615850e-47 |
| Msa0615210 | Msa1218160 | 0.814406 | 1.565973e-51 | -8.615850e-47 |
| Msa0626920 | Msa1218160 | 0.800115 | 1.676956e-48 | -8.615850e-47 |
| Msa0628810 | Msa1218160 | 0.818183 | 2.238579e-52 | -8.615850e-47 |
| Msa0631320 | Msa1218160 | 0.869094 | 4.006255e-66 | -8.615850e-47 |
| Msa0635270 | Msa1218160 | 0.800180 | 1.626114e-48 | -8.615850e-47 |
| Msa0639110 | Msa1218160 | 0.805449 | 1.327900e-49 | -8.615850e-47 |
| Msa0641130 | Msa1218160 | 0.814750 | 1.313853e-51 | -8.615850e-47 |
| Msa0654900 | Msa1218160 | 0.808661 | 2.775163e-50 | -8.615850e-47 |
| Msa0669700 | Msa1218160 | 0.822872 | 1.877893e-53 | -8.615850e-47 |
| Msa0669740 | Msa1218160 | 0.806445 | 8.196811e-50 | -8.615850e-47 |
| Msa0679670 | Msa1218160 | 0.837149 | 6.162577e-57 | -8.615850e-47 |
| Msa0693750 | Msa1218160 | 0.829938 | 3.889025e-55 | -8.615850e-47 |
| Msa0697680 | Msa1218160 | 0.806331 | 8.663509e-50 | -8.615850e-47 |
| Msa0698450 | Msa1218160 | 0.825728 | 4.001347e-54 | -8.615850e-47 |
| Msa0698460 | Msa1218160 | 0.842146 | 3.089558e-58 | -8.615850e-47 |
| Msa0703810 | Msa1218160 | 0.800783 | 1.225689e-48 | -8.615850e-47 |
| Msa0713060 | Msa1218160 | 0.866166 | 3.478595e-65 | -8.615850e-47 |
| Msa0720640 | Msa1218160 | 0.813478 | 2.508044e-51 | -8.615850e-47 |
| Msa0729350 | Msa1218160 | 0.836034 | 1.185411e-56 | -8.615850e-47 |
| Msa0734940 | Msa1218160 | 0.800546 | 1.370279e-48 | -8.615850e-47 |
| Msa0744640 | Msa1218160 | 0.864548 | 1.123496e-64 | -8.615850e-47 |
| Msa0769720 | Msa1218160 | 0.862113 | 6.378443e-64 | -8.615850e-47 |
| Msa0787790 | Msa1218160 | 0.838197 | 3.318395e-57 | -8.615850e-47 |
| Msa0794350 | Msa1218160 | 0.801310 | 9.563015e-49 | -8.615850e-47 |
| Msa0796580 | Msa1218160 | -0.814813 | 1.272526e-51 | -8.615850e-47 |
| Msa0804870 | Msa1218160 | 0.810948 | 8.940599e-51 | -8.615850e-47 |
| Msa0807670 | Msa1218160 | 0.837701 | 4.450654e-57 | -8.615850e-47 |
| Msa0807680 | Msa1218160 | 0.840980 | 6.269165e-58 | -8.615850e-47 |
| Msa0812530 | Msa1218160 | 0.838221 | 3.271335e-57 | -8.615850e-47 |
| Msa0816630 | Msa1218160 | 0.839610 | 1.429187e-57 | -8.615850e-47 |
| Msa0824930 | Msa1218160 | 0.807851 | 4.131186e-50 | -8.615850e-47 |
| Msa0826380 | Msa1218160 | 0.802815 | 4.690522e-49 | -8.615850e-47 |
| Msa0841730 | Msa1218160 | 0.864038 | 1.620689e-64 | -8.615850e-47 |
| Msa0136630 | Msa1218160 | 0.828205 | 1.023378e-54 | -8.615850e-47 |
| Msa0137860 | Msa1218160 | 0.890195 | 1.227395e-73 | -8.615850e-47 |
| Msa0137980 | Msa1218160 | 0.845024 | 5.253973e-59 | -8.615850e-47 |
| Msa0138900 | Msa1218160 | 0.956385 | 3.342224e-114 | -8.615850e-47 |
| Msa0145430 | Msa1218160 | 0.824415 | 8.172423e-54 | -8.615850e-47 |
| Msa0147790 | Msa1218160 | 0.835502 | 1.616923e-56 | -8.615850e-47 |
| Msa0151170 | Msa1218160 | 0.821833 | 3.271901e-53 | -8.615850e-47 |
| Msa0151220 | Msa1218160 | 0.830142 | 3.468437e-55 | -8.615850e-47 |
| Msa0170770 | Msa1218160 | 0.822542 | 2.240619e-53 | -8.615850e-47 |
| Msa0176260 | Msa1218160 | 0.860811 | 1.592167e-63 | -8.615850e-47 |
| Msa0183910 | Msa1218160 | 0.829567 | 4.788886e-55 | -8.615850e-47 |
| Msa0187310 | Msa1218160 | 0.835137 | 1.998493e-56 | -8.615850e-47 |
| Msa0196880 | Msa1218160 | 0.846833 | 1.693917e-59 | -8.615850e-47 |
| Msa0198730 | Msa1218160 | 0.827229 | 1.755919e-54 | -8.615850e-47 |
| Msa0213430 | Msa1218160 | 0.827304 | 1.684096e-54 | -8.615850e-47 |
| Msa0213540 | Msa1218160 | 0.802561 | 5.292273e-49 | -8.615850e-47 |
| Msa0223140 | Msa1218160 | 0.849705 | 2.724561e-60 | -8.615850e-47 |
| Msa0224130 | Msa1218160 | 0.876595 | 1.232725e-68 | -8.615850e-47 |
| Msa0233970 | Msa1218160 | 0.831155 | 1.959824e-55 | -8.615850e-47 |
| Msa0364790 | Msa1218160 | 0.846238 | 2.462941e-59 | -8.615850e-47 |
| Msa0365950 | Msa1218160 | 0.841151 | 5.653269e-58 | -8.615850e-47 |
| Msa0380600 | Msa1218160 | 0.840906 | 6.556871e-58 | -8.615850e-47 |
| Msa0393100 | Msa1218160 | 0.826174 | 3.134491e-54 | -8.615850e-47 |
| Msa0402800 | Msa1218160 | 0.835007 | 2.156032e-56 | -8.615850e-47 |
| Msa0412260 | Msa1218160 | 0.837831 | 4.121037e-57 | -8.615850e-47 |
| Msa0413870 | Msa1218160 | 0.840144 | 1.037684e-57 | -8.615850e-47 |
| Msa0427310 | Msa1218160 | 0.801540 | 8.580280e-49 | -8.615850e-47 |
| Msa0430240 | Msa1218160 | 0.841902 | 3.585291e-58 | -8.615850e-47 |
| Msa0443450 | Msa1218160 | 0.821368 | 4.189680e-53 | -8.615850e-47 |
| Msa0456770 | Msa1218160 | 0.849689 | 2.752685e-60 | -8.615850e-47 |
| Msa0460670 | Msa1218160 | -0.823809 | 1.133994e-53 | -8.615850e-47 |
| Msa0982090 | Msa1218160 | -0.806992 | 6.283902e-50 | -8.615850e-47 |
| Msa1011250 | Msa1218160 | 0.809784 | 1.594746e-50 | -8.615850e-47 |
| Msa1015880 | Msa1218160 | 0.806404 | 8.361493e-50 | -8.615850e-47 |
| Msa1016960 | Msa1218160 | 0.854921 | 8.917317e-62 | -8.615850e-47 |
| Msa1023310 | Msa1218160 | 0.805868 | 1.084329e-49 | -8.615850e-47 |
| Msa1025750 | Msa1218160 | 0.802997 | 4.300377e-49 | -8.615850e-47 |
| Msa1034450 | Msa1218160 | 0.819108 | 1.381061e-52 | -8.615850e-47 |
| Msa1058200 | Msa1218160 | 0.852784 | 3.677973e-61 | -8.615850e-47 |
| Msa1062040 | Msa1218160 | 0.852509 | 4.405543e-61 | -8.615850e-47 |
| Msa1068380 | Msa1218160 | 0.804560 | 2.037118e-49 | -8.615850e-47 |
| Msa1069340 | Msa1218160 | 0.801007 | 1.103215e-48 | -8.615850e-47 |
| Msa1070540 | Msa1218160 | 0.818226 | 2.188685e-52 | -8.615850e-47 |
| Msa1074200 | Msa1218160 | 0.819342 | 1.221277e-52 | -8.615850e-47 |
| Msa1086490 | Msa1218160 | -0.806620 | 7.530276e-50 | -8.615850e-47 |
| Msa1089190 | Msa1218160 | 0.862229 | 5.875896e-64 | -8.615850e-47 |
| Msa1101240 | Msa1218160 | 0.817243 | 3.647622e-52 | -8.615850e-47 |
| Msa0241480 | Msa1218160 | 0.845918 | 3.008851e-59 | -8.615850e-47 |
| Msa0254470 | Msa1218160 | 0.804264 | 2.348737e-49 | -8.615850e-47 |
| Msa0259440 | Msa1218160 | 0.813259 | 2.801773e-51 | -8.615850e-47 |
| Msa0259580 | Msa1218160 | 0.803785 | 2.954120e-49 | -8.615850e-47 |
| Msa0264500 | Msa1218160 | 0.805545 | 1.267869e-49 | -8.615850e-47 |
| Msa0264520 | Msa1218160 | 0.833953 | 3.964987e-56 | -8.615850e-47 |
| Msa0264680 | Msa1218160 | 0.878341 | 3.037682e-69 | -8.615850e-47 |
| Msa0265270 | Msa1218160 | 0.874352 | 7.221416e-68 | -8.615850e-47 |
| Msa0272400 | Msa1218160 | 0.832485 | 9.204884e-56 | -8.615850e-47 |
| Msa0276430 | Msa1218160 | 0.871715 | 5.531361e-67 | -8.615850e-47 |
| Msa0279430 | Msa1218160 | 0.836824 | 7.462611e-57 | -8.615850e-47 |
| Msa0293720 | Msa1218160 | 0.807074 | 6.036545e-50 | -8.615850e-47 |
| Msa0302510 | Msa1218160 | 0.827487 | 1.522461e-54 | -8.615850e-47 |
| Msa0302730 | Msa1218160 | 0.883161 | 5.672085e-71 | -8.615850e-47 |
| Msa0305620 | Msa1218160 | 0.822376 | 2.448045e-53 | -8.615850e-47 |
| Msa0306310 | Msa1218160 | 0.835982 | 1.221946e-56 | -8.615850e-47 |
| Msa0312590 | Msa1218160 | 0.825218 | 5.285536e-54 | -8.615850e-47 |
| Msa0316470 | Msa1218160 | 0.871754 | 5.368745e-67 | -8.615850e-47 |
| Msa0319020 | Msa1218160 | 0.854629 | 1.083522e-61 | -8.615850e-47 |
| Msa0331020 | Msa1218160 | 0.823184 | 1.587914e-53 | -8.615850e-47 |
| Msa0332190 | Msa1218160 | 0.823085 | 1.674227e-53 | -8.615850e-47 |
| Msa0332200 | Msa1218160 | 0.806877 | 6.645564e-50 | -8.615850e-47 |
| Msa0339720 | Msa1218160 | 0.844988 | 5.374741e-59 | -8.615850e-47 |
| Msa0345980 | Msa1218160 | 0.818786 | 1.634371e-52 | -8.615850e-47 |
| Msa1107200 | Msa1218160 | 0.838070 | 3.577961e-57 | -8.615850e-47 |
| Msa1109670 | Msa1218160 | 0.818075 | 2.368028e-52 | -8.615850e-47 |
| Msa1109810 | Msa1218160 | 0.842272 | 2.862210e-58 | -8.615850e-47 |
| Msa1111610 | Msa1218160 | 0.801532 | 8.613711e-49 | -8.615850e-47 |
| Msa1113100 | Msa1218160 | 0.842305 | 2.804957e-58 | -8.615850e-47 |
| Msa1114670 | Msa1218160 | 0.820804 | 5.652977e-53 | -8.615850e-47 |
| Msa1131430 | Msa1218160 | 0.829023 | 6.492378e-55 | -8.615850e-47 |
| Msa1131790 | Msa1218160 | 0.870389 | 1.514624e-66 | -8.615850e-47 |
| Msa1133700 | Msa1218160 | 0.801152 | 1.030450e-48 | -8.615850e-47 |
| Msa1150780 | Msa1218160 | 0.835330 | 1.787304e-56 | -8.615850e-47 |
| Msa1156820 | Msa1218160 | 0.812544 | 4.018971e-51 | -8.615850e-47 |
| Msa1159170 | Msa1218160 | 0.839361 | 1.659538e-57 | -8.615850e-47 |
| Msa1165430 | Msa1218160 | 0.802461 | 5.547884e-49 | -8.615850e-47 |
| Msa1173150 | Msa1218160 | 0.842961 | 1.877912e-58 | -8.615850e-47 |
| Msa1180720 | Msa1218160 | 0.824772 | 6.733733e-54 | -8.615850e-47 |
| Msa1181060 | Msa1218160 | 0.822962 | 1.788636e-53 | -8.615850e-47 |
| Msa1183140 | Msa1218160 | 0.848869 | 4.654558e-60 | -8.615850e-47 |
| Msa1187490 | Msa1218160 | 0.808168 | 3.535689e-50 | -8.615850e-47 |
| Msa1188350 | Msa1218160 | 0.814992 | 1.161378e-51 | -8.615850e-47 |
| Msa1199870 | Msa1218160 | 0.832809 | 7.646600e-56 | -8.615850e-47 |
| Msa1208990 | Msa1218160 | 0.813633 | 2.318633e-51 | -8.615850e-47 |
| Msa1212470 | Msa1218160 | 0.818333 | 2.070987e-52 | -8.615850e-47 |
| Msa1218160 | Msa1218800 | 0.805610 | 1.228349e-49 | -8.615850e-47 |
| Msa1218160 | Msa1221220 | 0.844523 | 7.171467e-59 | -8.615850e-47 |
| Msa1218160 | Msa1221240 | 0.832757 | 7.880099e-56 | -8.615850e-47 |
| Msa1218160 | Msa1221960 | 0.818378 | 2.022813e-52 | -8.615850e-47 |
| Msa1218160 | Msa1225580 | 0.881633 | 2.041700e-70 | -8.615850e-47 |
| Msa1218160 | Msa1229480 | 0.838092 | 3.531706e-57 | -8.615850e-47 |
| Msa1218160 | Msa1231710 | 0.801899 | 7.240933e-49 | -8.615850e-47 |
| Msa1218160 | Msa1238680 | 0.841910 | 3.566786e-58 | -8.615850e-47 |
| Msa1218160 | Msa1246780 | 0.864822 | 9.223313e-65 | -8.615850e-47 |
| Msa1218160 | Msa1246790 | 0.838372 | 2.990787e-57 | -8.615850e-47 |
| Msa1218160 | Msa1252000 | 0.825216 | 5.289395e-54 | -8.615850e-47 |
| Msa1218160 | Msa1252810 | 0.868767 | 5.110524e-66 | -8.615850e-47 |
| Msa1218160 | Msa1260060 | 0.801733 | 7.833407e-49 | -8.615850e-47 |
| Msa1218160 | Msa1265020 | 0.816150 | 6.413324e-52 | -8.615850e-47 |
| Msa1218160 | Msa1274380 | 0.816421 | 5.577449e-52 | -8.615850e-47 |
| Msa1218160 | Msa1277780 | 0.815912 | 7.248111e-52 | -8.615850e-47 |
| Msa1218160 | Msa1280170 | 0.822615 | 2.154662e-53 | -8.615850e-47 |
| Msa1218160 | Msa1284090 | 0.803417 | 3.521265e-49 | -8.615850e-47 |
| Msa1218160 | Msa1286210 | 0.863751 | 1.991078e-64 | -8.615850e-47 |
| Msa1218160 | Msa1286220 | 0.865583 | 5.315918e-65 | -8.615850e-47 |
| Msa1218160 | Msa1296240 | 0.809146 | 2.185718e-50 | -8.615850e-47 |
| Msa1218160 | Msa1307160 | 0.817241 | 3.652550e-52 | -8.615850e-47 |
| Msa1218160 | Msa1309760 | 0.847516 | 1.101054e-59 | -8.615850e-47 |
| Msa1218160 | Msa1312440 | 0.818468 | 1.929235e-52 | -8.615850e-47 |
| Msa1218160 | Msa1329900 | 0.800137 | 1.659918e-48 | -8.615850e-47 |
| Msa1218160 | Msa1334840 | 0.818010 | 2.449435e-52 | -8.615850e-47 |
| Msa1218160 | Msa1355510 | 0.879567 | 1.121643e-69 | -8.615850e-47 |
| Msa1218160 | Msa1359610 | 0.802968 | 4.361177e-49 | -8.615850e-47 |
| Msa1218160 | Msa1364080 | 0.868578 | 5.884173e-66 | -8.615850e-47 |
| Msa1218160 | Msa1367790 | 0.804312 | 2.294887e-49 | -8.615850e-47 |
| Msa1218160 | Msa1369320 | 0.809876 | 1.523691e-50 | -8.615850e-47 |
| Msa1218160 | Msa1370420 | 0.806127 | 9.565271e-50 | -8.615850e-47 |
| Msa1218160 | Msa1370810 | 0.816663 | 4.923928e-52 | -8.615850e-47 |
| Msa1218160 | Msa1382380 | -0.807454 | 5.014526e-50 | -8.615850e-47 |
| Msa1218160 | Msa1386000 | 0.835011 | 2.150608e-56 | -8.615850e-47 |
| Msa1218160 | Msa1389640 | 0.804847 | 1.775118e-49 | -8.615850e-47 |
| Msa1218160 | Msa1389760 | 0.801955 | 7.053376e-49 | -8.615850e-47 |
| Msa1218160 | Msa1397390 | 0.811829 | 5.754871e-51 | -8.615850e-47 |
| Msa1218160 | Msa1402350 | 0.804512 | 2.084344e-49 | -8.615850e-47 |
| Msa1218160 | Msa1403690 | 0.818505 | 1.893004e-52 | -8.615850e-47 |
| Msa1218160 | Msa1407760 | 0.810061 | 1.389872e-50 | -8.615850e-47 |
| Msa1218160 | Msa1413800 | 0.807080 | 6.018140e-50 | -8.615850e-47 |
| Msa1218160 | Msa1433410 | 0.893310 | 7.080887e-75 | -8.615850e-47 |
| Msa1218160 | Msa1435320 | 0.840441 | 8.678904e-58 | -8.615850e-47 |
| Msa1218160 | Msa1436090 | 0.806133 | 9.539518e-50 | -8.615850e-47 |
| Msa1218160 | Msa1443400 | 0.840366 | 9.082130e-58 | -8.615850e-47 |
| Msa1218160 | Msa1443620 | 0.885530 | 7.507715e-72 | -8.615850e-47 |
| Msa1218160 | Msa1443640 | 0.817791 | 2.745888e-52 | -8.615850e-47 |
| Msa1218160 | Msa1448040 | 0.841309 | 5.137757e-58 | -8.615850e-47 |
| Msa0484800 | Msa1218160 | 0.822637 | 2.129577e-53 | -8.615850e-47 |
| Msa0488580 | Msa1218160 | 0.836969 | 6.850557e-57 | -8.615850e-47 |
| Msa0490320 | Msa1218160 | 0.803768 | 2.976934e-49 | -8.615850e-47 |
| Msa0497860 | Msa1218160 | 0.832056 | 1.175248e-55 | -8.615850e-47 |
| Msa0500400 | Msa1218160 | 0.821436 | 4.041635e-53 | -8.615850e-47 |
| Msa0521130 | Msa1218160 | 0.821974 | 3.034458e-53 | -8.615850e-47 |
| Msa0529000 | Msa1218160 | 0.830595 | 2.688382e-55 | -8.615850e-47 |
| Msa0534870 | Msa1218160 | 0.870642 | 1.250293e-66 | -8.615850e-47 |
| Msa0536350 | Msa1218160 | 0.809647 | 1.706391e-50 | -8.615850e-47 |
| Msa0542530 | Msa1218160 | 0.805082 | 1.584546e-49 | -8.615850e-47 |
| Msa0545050 | Msa1218160 | 0.816393 | 5.660003e-52 | -8.615850e-47 |
| Msa0549140 | Msa1218160 | 0.816356 | 5.767546e-52 | -8.615850e-47 |
| Msa0560460 | Msa1218160 | 0.805934 | 1.050205e-49 | -8.615850e-47 |
| Msa0561360 | Msa1218160 | 0.832966 | 6.991978e-56 | -8.615850e-47 |
| Msa0567370 | Msa1218160 | 0.815995 | 6.945650e-52 | -8.615850e-47 |
| Msa0574930 | Msa1218160 | 0.833284 | 5.825063e-56 | -8.615850e-47 |
| Msa0579670 | Msa1218160 | 0.810037 | 1.406617e-50 | -8.615850e-47 |
| Msa0584580 | Msa1218160 | 0.863551 | 2.297169e-64 | -8.615850e-47 |
| Msa0584600 | Msa1218160 | 0.851410 | 9.038366e-61 | -8.615850e-47 |
| Msa0588670 | Msa1218160 | 0.814640 | 1.390075e-51 | -8.615850e-47 |
| Msa0588710 | Msa1218160 | 0.810724 | 9.999566e-51 | -8.615850e-47 |
| Msa0590390 | Msa1218160 | 0.833702 | 4.581320e-56 | -8.615850e-47 |
| Msa0592330 | Msa1218160 | 0.828739 | 7.605100e-55 | -8.615850e-47 |
| Msa0600590 | Msa1218160 | 0.838928 | 2.148048e-57 | -8.615850e-47 |
| Msa0852790 | Msa1218160 | 0.833707 | 4.568159e-56 | -8.615850e-47 |
| Msa0863940 | Msa1218160 | 0.818839 | 1.589824e-52 | -8.615850e-47 |
| Msa0863990 | Msa1218160 | 0.876364 | 1.481248e-68 | -8.615850e-47 |
| Msa0870510 | Msa1218160 | 0.843597 | 1.270793e-58 | -8.615850e-47 |
| Msa0930740 | Msa1218160 | 0.865994 | 3.942377e-65 | -8.615850e-47 |
| Msa0945130 | Msa1218160 | 0.890087 | 1.352828e-73 | -8.615850e-47 |
| Msa0968050 | Msa1218160 | 0.810499 | 1.118239e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1218160 | MtrunA17_Chr4g0067841 | 98.125 | 160 | 3 | 0 | 1 | 160 | 1 | 160 | 6.15e-115 | 322 |
| Msa1218160 | MtrunA17_Chr2g0295211 | 74.214 | 159 | 41 | 0 | 1 | 159 | 1 | 159 | 3.91e-89 | 257 |
| Msa1218160 | MtrunA17_Chr2g0295021 | 41.026 | 156 | 91 | 1 | 1 | 156 | 1 | 155 | 4.73e-38 | 127 |
| Msa1218160 | MtrunA17_Chr2g0295001 | 41.026 | 156 | 91 | 1 | 1 | 156 | 1 | 155 | 4.73e-38 | 127 |
| Msa1218160 | MtrunA17_Chr2g0295041 | 38.217 | 157 | 96 | 1 | 1 | 157 | 1 | 156 | 9.91e-36 | 121 |
| Msa1218160 | MtrunA17_Chr2g0295064 | 39.744 | 156 | 93 | 1 | 1 | 156 | 68 | 222 | 3.63e-35 | 122 |
| Msa1218160 | MtrunA17_Chr2g0295051 | 38.217 | 157 | 96 | 1 | 1 | 157 | 1 | 156 | 4.00e-35 | 120 |
| Msa1218160 | MtrunA17_Chr6g0462311 | 38.217 | 157 | 96 | 1 | 1 | 157 | 1 | 156 | 2.55e-34 | 118 |
| Msa1218160 | MtrunA17_Chr4g0067951 | 38.217 | 157 | 96 | 1 | 1 | 157 | 1 | 156 | 6.34e-34 | 117 |
| Msa1218160 | MtrunA17_Chr2g0295104 | 34.395 | 157 | 102 | 1 | 1 | 157 | 1 | 156 | 4.71e-31 | 109 |
| Msa1218160 | MtrunA17_Chr2g0295124 | 34.395 | 157 | 102 | 1 | 1 | 157 | 1 | 156 | 5.42e-31 | 109 |
| Msa1218160 | MtrunA17_Chr2g0295141 | 33.974 | 156 | 102 | 1 | 1 | 156 | 1 | 155 | 9.98e-30 | 106 |
| Msa1218160 | MtrunA17_Chr2g0295081 | 33.333 | 156 | 103 | 1 | 1 | 156 | 1 | 155 | 2.20e-29 | 105 |
| Msa1218160 | MtrunA17_Chr2g0295091 | 33.121 | 157 | 104 | 1 | 1 | 157 | 1 | 156 | 8.69e-29 | 103 |
| Msa1218160 | MtrunA17_Chr6g0462291 | 39.130 | 138 | 83 | 1 | 1 | 138 | 1 | 137 | 1.09e-28 | 103 |
| Msa1218160 | MtrunA17_Chr4g0067921 | 36.709 | 158 | 96 | 3 | 1 | 156 | 1 | 156 | 9.76e-28 | 101 |
| Msa1218160 | MtrunA17_Chr3g0100201 | 29.221 | 154 | 101 | 3 | 6 | 155 | 5 | 154 | 3.16e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 53 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAATCTCTAGCCATTTA+TGG | 0.194905 | 8_1:+80724376 | None:intergenic |
| ATAGCATGTGTGGCCATAAA+TGG | 0.272259 | 8_1:-80724389 | Msa1218160:three_prime_UTR |
| ACAAACTGTGGTAAGAGCTT+TGG | 0.325990 | 8_1:+80725532 | None:intergenic |
| TGATTGAAGGGGATCCATTA+GGG | 0.331913 | 8_1:-80724791 | Msa1218160:CDS |
| CAAACTGTGGTAAGAGCTTT+GGG | 0.338115 | 8_1:+80725533 | None:intergenic |
| CATGCTATAAGAACTTATTA+AGG | 0.375284 | 8_1:+80724404 | None:intergenic |
| TTCTAAGAAATTTCGTTTCA+AGG | 0.377486 | 8_1:-80725743 | Msa1218160:five_prime_UTR |
| ATGATTGAAGGGGATCCATT+AGG | 0.378730 | 8_1:-80724792 | Msa1218160:CDS |
| ATTGAAGGAGATGGAGGAGC+TGG | 0.382904 | 8_1:-80725493 | Msa1218160:CDS |
| ATGGCTAGAGATTGGTGGTT+TGG | 0.393597 | 8_1:-80724370 | Msa1218160:three_prime_UTR |
| GATTCAAGCTTGTCCCCTAA+TGG | 0.397124 | 8_1:+80724777 | None:intergenic |
| GCTTGAATCTATTGCTTATG+AGG | 0.397842 | 8_1:-80724763 | Msa1218160:CDS |
| TGGAGGTTGTCTATGTAAAA+TGG | 0.399526 | 8_1:-80724718 | Msa1218160:CDS |
| TGTGCAACCATAGGGACATT+TGG | 0.430897 | 8_1:-80724449 | Msa1218160:three_prime_UTR |
| AGGAAGATGTAAAGGAAGGA+AGG | 0.431562 | 8_1:-80724656 | Msa1218160:CDS |
| TGCAAATACACTATGATTGA+AGG | 0.436438 | 8_1:-80724804 | Msa1218160:CDS |
| GCAAGCAGTTACAAGACTAT+TGG | 0.438215 | 8_1:-80724696 | Msa1218160:CDS |
| TGCTTATGAGGTGAAGTTTG+AGG | 0.442957 | 8_1:-80724751 | Msa1218160:CDS |
| AAAGATGTTAGTATAATTGA+AGG | 0.444869 | 8_1:-80725508 | Msa1218160:CDS |
| ATAAGTTAGAAGCTATGTAT+TGG | 0.452726 | 8_1:-80724334 | Msa1218160:three_prime_UTR |
| AAAGATTGATGTGCTTGATA+AGG | 0.454495 | 8_1:-80724838 | Msa1218160:CDS |
| ACGCGATGGTGCAACGGTTG+AGG | 0.456171 | 8_1:+80725594 | None:intergenic |
| AAGTTTGAGGCTACAAATGA+TGG | 0.474637 | 8_1:-80724738 | Msa1218160:CDS |
| AGACCAAGAGGGAGAGACTT+TGG | 0.478186 | 8_1:+80725700 | None:intergenic |
| TCTAAGAAATTTCGTTTCAA+GGG | 0.482824 | 8_1:-80725742 | Msa1218160:five_prime_UTR |
| AGACCAAAGTCTCTCCCTCT+TGG | 0.498721 | 8_1:-80725703 | Msa1218160:five_prime_UTR |
| GTTAGTATAATTGAAGGAGA+TGG | 0.504523 | 8_1:-80725502 | Msa1218160:CDS |
| TGTTAAAGAGGAAGATGTAA+AGG | 0.506693 | 8_1:-80724664 | Msa1218160:CDS |
| AACCATTCCAAATGTCCCTA+TGG | 0.508956 | 8_1:+80724442 | None:intergenic |
| TAATAAGTGTGTGCAACCAT+AGG | 0.510404 | 8_1:-80724458 | Msa1218160:three_prime_UTR |
| GAAGGAAGGGAAAGTACCAT+TGG | 0.512113 | 8_1:-80724642 | Msa1218160:CDS |
| CATTGGAATTTACAAAGTTG+TGG | 0.512917 | 8_1:-80724625 | Msa1218160:CDS |
| GGAAGATGTAAAGGAAGGAA+GGG | 0.521833 | 8_1:-80724655 | Msa1218160:CDS |
| GAACAAGTCAACTTCAATGA+AGG | 0.526221 | 8_1:-80725463 | Msa1218160:intron |
| GCAAATACACTATGATTGAA+GGG | 0.531266 | 8_1:-80724803 | Msa1218160:CDS |
| AAAGAGGAAGATGTAAAGGA+AGG | 0.539687 | 8_1:-80724660 | Msa1218160:CDS |
| CACAACTTTGTAAATTCCAA+TGG | 0.553300 | 8_1:+80724626 | None:intergenic |
| AATAAGTGTGTGCAACCATA+GGG | 0.557043 | 8_1:-80724457 | Msa1218160:three_prime_UTR |
| AGTATAATTGAAGGAGATGG+AGG | 0.558565 | 8_1:-80725499 | Msa1218160:CDS |
| ATAAGTTCTTATAGCATGTG+TGG | 0.566334 | 8_1:-80724399 | Msa1218160:three_prime_UTR |
| AACCATAGGGACATTTGGAA+TGG | 0.577205 | 8_1:-80724444 | Msa1218160:three_prime_UTR |
| GGCCATAAATGGCTAGAGAT+TGG | 0.582190 | 8_1:-80724378 | Msa1218160:three_prime_UTR |
| TTTGTTTCAGATATTTGAAG+GGG | 0.583251 | 8_1:+80724859 | None:intergenic |
| TGAGGAATACTCATGTGTAA+AGG | 0.583283 | 8_1:+80725612 | None:intergenic |
| CAAATACACTATGATTGAAG+GGG | 0.588174 | 8_1:-80724802 | Msa1218160:CDS |
| CATAAATGGCTAGAGATTGG+TGG | 0.589589 | 8_1:-80724375 | Msa1218160:three_prime_UTR |
| GAACATACGCGATGGTGCAA+CGG | 0.605469 | 8_1:+80725588 | None:intergenic |
| CTAACATCTTTAACAAACTG+TGG | 0.611198 | 8_1:+80725520 | None:intergenic |
| TTTGAGGCTACAAATGATGG+AGG | 0.641637 | 8_1:-80724735 | Msa1218160:CDS |
| TGTGAATGATATAGACCAAG+AGG | 0.653527 | 8_1:+80725688 | None:intergenic |
| GTGAATGATATAGACCAAGA+GGG | 0.661189 | 8_1:+80725689 | None:intergenic |
| GATTGAAGGGGATCCATTAG+GGG | 0.664801 | 8_1:-80724790 | Msa1218160:CDS |
| AAAGCTGTGAACATACGCGA+TGG | 0.674937 | 8_1:+80725580 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTTTTTATAAAAAAAAAG+TGG | + | chr8_1:80724905-80724924 | None:intergenic | 10.0% |
| !! | AAAAATATTACAAATTTGAA+TGG | + | chr8_1:80725579-80725598 | None:intergenic | 10.0% |
| !!! | AAGTTTTTATAAAAAAAAAG+TGG | + | chr8_1:80724905-80724924 | None:intergenic | 10.0% |
| !! | AAAAATATTACAAATTTGAA+TGG | + | chr8_1:80725579-80725598 | None:intergenic | 10.0% |
| !! | AATCTAAAAAAATTCACTAT+GGG | - | chr8_1:80724438-80724457 | Msa1218160:three_prime_UTR | 15.0% |
| !! | CTAAGATAAAATTTCTATTT+AGG | + | chr8_1:80724844-80724863 | None:intergenic | 15.0% |
| !! | AATCTAAAAAAATTCACTAT+GGG | - | chr8_1:80724438-80724457 | Msa1218160:three_prime_UTR | 15.0% |
| !! | CTAAGATAAAATTTCTATTT+AGG | + | chr8_1:80724844-80724863 | None:intergenic | 15.0% |
| !!! | TTTTAGATTGAAGATTTACA+AGG | + | chr8_1:80724427-80724446 | None:intergenic | 20.0% |
| !! | CAATCTAAAAAAATTCACTA+TGG | - | chr8_1:80724437-80724456 | Msa1218160:three_prime_UTR | 20.0% |
| !! | AAAGATGTTAGTATAATTGA+AGG | - | chr8_1:80724573-80724592 | Msa1218160:exon | 20.0% |
| !! | AATTCTTTAACCAATATTTC+GGG | + | chr8_1:80724821-80724840 | None:intergenic | 20.0% |
| !! | GAATTCTTTAACCAATATTT+CGG | + | chr8_1:80724822-80724841 | None:intergenic | 20.0% |
| !!! | AAAATATTTTTGGATTGCTT+CGG | - | chr8_1:80725109-80725128 | Msa1218160:intron | 20.0% |
| !!! | TTTTGTTTCAGATATTTGAA+GGG | + | chr8_1:80725226-80725245 | None:intergenic | 20.0% |
| !!! | TTTTAGATTGAAGATTTACA+AGG | + | chr8_1:80724427-80724446 | None:intergenic | 20.0% |
| !! | CAATCTAAAAAAATTCACTA+TGG | - | chr8_1:80724437-80724456 | Msa1218160:three_prime_UTR | 20.0% |
| !! | AAAGATGTTAGTATAATTGA+AGG | - | chr8_1:80724573-80724592 | Msa1218160:exon | 20.0% |
| !! | AATTCTTTAACCAATATTTC+GGG | + | chr8_1:80724821-80724840 | None:intergenic | 20.0% |
| !! | GAATTCTTTAACCAATATTT+CGG | + | chr8_1:80724822-80724841 | None:intergenic | 20.0% |
| !!! | AAAATATTTTTGGATTGCTT+CGG | - | chr8_1:80725109-80725128 | Msa1218160:intron | 20.0% |
| !!! | TTTTGTTTCAGATATTTGAA+GGG | + | chr8_1:80725226-80725245 | None:intergenic | 20.0% |
| !! | TTCTAAGAAATTTCGTTTCA+AGG | - | chr8_1:80724338-80724357 | Msa1218160:three_prime_UTR | 25.0% |
| ! | TCTAAGAAATTTCGTTTCAA+GGG | - | chr8_1:80724339-80724358 | Msa1218160:three_prime_UTR | 25.0% |
| ! | ATTCTTTAACCAATATTTCG+GGG | + | chr8_1:80724820-80724839 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAACTTCTC+TGG | + | chr8_1:80725166-80725185 | None:intergenic | 25.0% |
| !! | GTATTTCTATTATGATATGC+AGG | - | chr8_1:80725196-80725215 | Msa1218160:intron | 25.0% |
| ! | TTTGTTTCAGATATTTGAAG+GGG | + | chr8_1:80725225-80725244 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTCAGATATTTGA+AGG | + | chr8_1:80725227-80725246 | None:intergenic | 25.0% |
| ! | CATGCTATAAGAACTTATTA+AGG | + | chr8_1:80725680-80725699 | None:intergenic | 25.0% |
| ! | ATAAGTTAGAAGCTATGTAT+TGG | - | chr8_1:80725747-80725766 | Msa1218160:five_prime_UTR | 25.0% |
| !! | TTCTAAGAAATTTCGTTTCA+AGG | - | chr8_1:80724338-80724357 | Msa1218160:three_prime_UTR | 25.0% |
| ! | TCTAAGAAATTTCGTTTCAA+GGG | - | chr8_1:80724339-80724358 | Msa1218160:three_prime_UTR | 25.0% |
| ! | ATTCTTTAACCAATATTTCG+GGG | + | chr8_1:80724820-80724839 | None:intergenic | 25.0% |
| ! | ATTCAAGAAATAAACTTCTC+TGG | + | chr8_1:80725166-80725185 | None:intergenic | 25.0% |
| !! | GTATTTCTATTATGATATGC+AGG | - | chr8_1:80725196-80725215 | Msa1218160:intron | 25.0% |
| ! | TTTGTTTCAGATATTTGAAG+GGG | + | chr8_1:80725225-80725244 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTCAGATATTTGA+AGG | + | chr8_1:80725227-80725246 | None:intergenic | 25.0% |
| ! | CATGCTATAAGAACTTATTA+AGG | + | chr8_1:80725680-80725699 | None:intergenic | 25.0% |
| ! | ATAAGTTAGAAGCTATGTAT+TGG | - | chr8_1:80725747-80725766 | Msa1218160:five_prime_UTR | 25.0% |
| CTAACATCTTTAACAAACTG+TGG | + | chr8_1:80724564-80724583 | None:intergenic | 30.0% | |
| GTTAGTATAATTGAAGGAGA+TGG | - | chr8_1:80724579-80724598 | Msa1218160:exon | 30.0% | |
| AAATGTTTAACCAATGTCGT+TGG | - | chr8_1:80724934-80724953 | Msa1218160:intron | 30.0% | |
| AATGTTTAACCAATGTCGTT+GGG | - | chr8_1:80724935-80724954 | Msa1218160:intron | 30.0% | |
| AAAGATTGATGTGCTTGATA+AGG | - | chr8_1:80725243-80725262 | Msa1218160:intron | 30.0% | |
| TGCAAATACACTATGATTGA+AGG | - | chr8_1:80725277-80725296 | Msa1218160:intron | 30.0% | |
| GCAAATACACTATGATTGAA+GGG | - | chr8_1:80725278-80725297 | Msa1218160:intron | 30.0% | |
| CAAATACACTATGATTGAAG+GGG | - | chr8_1:80725279-80725298 | Msa1218160:intron | 30.0% | |
| !! | TGGAGATTTTGATGTTAAAG+AGG | - | chr8_1:80725405-80725424 | Msa1218160:intron | 30.0% |
| TGTTAAAGAGGAAGATGTAA+AGG | - | chr8_1:80725417-80725436 | Msa1218160:intron | 30.0% | |
| CACAACTTTGTAAATTCCAA+TGG | + | chr8_1:80725458-80725477 | None:intergenic | 30.0% | |
| CATTGGAATTTACAAAGTTG+TGG | - | chr8_1:80725456-80725475 | Msa1218160:intron | 30.0% | |
| AAAAATCAAGCATAGACTTG+TGG | + | chr8_1:80725502-80725521 | None:intergenic | 30.0% | |
| ATAAGTTCTTATAGCATGTG+TGG | - | chr8_1:80725682-80725701 | Msa1218160:five_prime_UTR | 30.0% | |
| CTAACATCTTTAACAAACTG+TGG | + | chr8_1:80724564-80724583 | None:intergenic | 30.0% | |
| GTTAGTATAATTGAAGGAGA+TGG | - | chr8_1:80724579-80724598 | Msa1218160:exon | 30.0% | |
| AAATGTTTAACCAATGTCGT+TGG | - | chr8_1:80724934-80724953 | Msa1218160:intron | 30.0% | |
| AATGTTTAACCAATGTCGTT+GGG | - | chr8_1:80724935-80724954 | Msa1218160:intron | 30.0% | |
| AAAGATTGATGTGCTTGATA+AGG | - | chr8_1:80725243-80725262 | Msa1218160:intron | 30.0% | |
| TGCAAATACACTATGATTGA+AGG | - | chr8_1:80725277-80725296 | Msa1218160:intron | 30.0% | |
| GCAAATACACTATGATTGAA+GGG | - | chr8_1:80725278-80725297 | Msa1218160:intron | 30.0% | |
| CAAATACACTATGATTGAAG+GGG | - | chr8_1:80725279-80725298 | Msa1218160:intron | 30.0% | |
| !! | TGGAGATTTTGATGTTAAAG+AGG | - | chr8_1:80725405-80725424 | Msa1218160:intron | 30.0% |
| TGTTAAAGAGGAAGATGTAA+AGG | - | chr8_1:80725417-80725436 | Msa1218160:intron | 30.0% | |
| CACAACTTTGTAAATTCCAA+TGG | + | chr8_1:80725458-80725477 | None:intergenic | 30.0% | |
| CATTGGAATTTACAAAGTTG+TGG | - | chr8_1:80725456-80725475 | Msa1218160:intron | 30.0% | |
| AAAAATCAAGCATAGACTTG+TGG | + | chr8_1:80725502-80725521 | None:intergenic | 30.0% | |
| ATAAGTTCTTATAGCATGTG+TGG | - | chr8_1:80725682-80725701 | Msa1218160:five_prime_UTR | 30.0% | |
| GTGAATGATATAGACCAAGA+GGG | + | chr8_1:80724395-80724414 | None:intergenic | 35.0% | |
| TGTGAATGATATAGACCAAG+AGG | + | chr8_1:80724396-80724415 | None:intergenic | 35.0% | |
| TGAGGAATACTCATGTGTAA+AGG | + | chr8_1:80724472-80724491 | None:intergenic | 35.0% | |
| AGTATAATTGAAGGAGATGG+AGG | - | chr8_1:80724582-80724601 | Msa1218160:exon | 35.0% | |
| GAACAAGTCAACTTCAATGA+AGG | - | chr8_1:80724618-80724637 | Msa1218160:CDS | 35.0% | |
| ! | TCTAAGACCTCAATATGTGT+TGG | + | chr8_1:80724680-80724699 | None:intergenic | 35.0% |
| ATGTTTAACCAATGTCGTTG+GGG | - | chr8_1:80724936-80724955 | Msa1218160:intron | 35.0% | |
| !!! | ATATTTTTGGATTGCTTCGG+TGG | - | chr8_1:80725112-80725131 | Msa1218160:intron | 35.0% |
| GCTTGAATCTATTGCTTATG+AGG | - | chr8_1:80725318-80725337 | Msa1218160:intron | 35.0% | |
| ! | AAGTTTGAGGCTACAAATGA+TGG | - | chr8_1:80725343-80725362 | Msa1218160:intron | 35.0% |
| TGGAGGTTGTCTATGTAAAA+TGG | - | chr8_1:80725363-80725382 | Msa1218160:intron | 35.0% | |
| AAAGAGGAAGATGTAAAGGA+AGG | - | chr8_1:80725421-80725440 | Msa1218160:intron | 35.0% | |
| TAATAAGTGTGTGCAACCAT+AGG | - | chr8_1:80725623-80725642 | Msa1218160:CDS | 35.0% | |
| AATAAGTGTGTGCAACCATA+GGG | - | chr8_1:80725624-80725643 | Msa1218160:CDS | 35.0% | |
| GTGAATGATATAGACCAAGA+GGG | + | chr8_1:80724395-80724414 | None:intergenic | 35.0% | |
| TGTGAATGATATAGACCAAG+AGG | + | chr8_1:80724396-80724415 | None:intergenic | 35.0% | |
| TGAGGAATACTCATGTGTAA+AGG | + | chr8_1:80724472-80724491 | None:intergenic | 35.0% | |
| AGTATAATTGAAGGAGATGG+AGG | - | chr8_1:80724582-80724601 | Msa1218160:exon | 35.0% | |
| GAACAAGTCAACTTCAATGA+AGG | - | chr8_1:80724618-80724637 | Msa1218160:CDS | 35.0% | |
| ! | TCTAAGACCTCAATATGTGT+TGG | + | chr8_1:80724680-80724699 | None:intergenic | 35.0% |
| ATGTTTAACCAATGTCGTTG+GGG | - | chr8_1:80724936-80724955 | Msa1218160:intron | 35.0% | |
| !!! | ATATTTTTGGATTGCTTCGG+TGG | - | chr8_1:80725112-80725131 | Msa1218160:intron | 35.0% |
| GCTTGAATCTATTGCTTATG+AGG | - | chr8_1:80725318-80725337 | Msa1218160:intron | 35.0% | |
| ! | AAGTTTGAGGCTACAAATGA+TGG | - | chr8_1:80725343-80725362 | Msa1218160:intron | 35.0% |
| TGGAGGTTGTCTATGTAAAA+TGG | - | chr8_1:80725363-80725382 | Msa1218160:intron | 35.0% | |
| AAAGAGGAAGATGTAAAGGA+AGG | - | chr8_1:80725421-80725440 | Msa1218160:intron | 35.0% | |
| TAATAAGTGTGTGCAACCAT+AGG | - | chr8_1:80725623-80725642 | Msa1218160:CDS | 35.0% | |
| AATAAGTGTGTGCAACCATA+GGG | - | chr8_1:80725624-80725643 | Msa1218160:CDS | 35.0% | |
| CAAACTGTGGTAAGAGCTTT+GGG | + | chr8_1:80724551-80724570 | None:intergenic | 40.0% | |
| ACAAACTGTGGTAAGAGCTT+TGG | + | chr8_1:80724552-80724571 | None:intergenic | 40.0% | |
| AGTCGATCCAACACATATTG+AGG | - | chr8_1:80724670-80724689 | Msa1218160:CDS | 40.0% | |
| TAATCACTGCCCCGAAATAT+TGG | - | chr8_1:80724808-80724827 | Msa1218160:CDS | 40.0% | |
| TGTTTAACCAATGTCGTTGG+GGG | - | chr8_1:80724937-80724956 | Msa1218160:intron | 40.0% | |
| TTTATCTGATGTCGACCCAA+TGG | + | chr8_1:80725143-80725162 | None:intergenic | 40.0% | |
| ATGATTGAAGGGGATCCATT+AGG | - | chr8_1:80725289-80725308 | Msa1218160:intron | 40.0% | |
| TGATTGAAGGGGATCCATTA+GGG | - | chr8_1:80725290-80725309 | Msa1218160:intron | 40.0% | |
| TGCTTATGAGGTGAAGTTTG+AGG | - | chr8_1:80725330-80725349 | Msa1218160:intron | 40.0% | |
| ! | TTTGAGGCTACAAATGATGG+AGG | - | chr8_1:80725346-80725365 | Msa1218160:intron | 40.0% |
| GCAAGCAGTTACAAGACTAT+TGG | - | chr8_1:80725385-80725404 | Msa1218160:intron | 40.0% | |
| AGGAAGATGTAAAGGAAGGA+AGG | - | chr8_1:80725425-80725444 | Msa1218160:intron | 40.0% | |
| GGAAGATGTAAAGGAAGGAA+GGG | - | chr8_1:80725426-80725445 | Msa1218160:intron | 40.0% | |
| AACCATAGGGACATTTGGAA+TGG | - | chr8_1:80725637-80725656 | Msa1218160:exon | 40.0% | |
| AACCATTCCAAATGTCCCTA+TGG | + | chr8_1:80725642-80725661 | None:intergenic | 40.0% | |
| ATAGCATGTGTGGCCATAAA+TGG | - | chr8_1:80725692-80725711 | Msa1218160:five_prime_UTR | 40.0% | |
| CACCAATCTCTAGCCATTTA+TGG | + | chr8_1:80725708-80725727 | None:intergenic | 40.0% | |
| CATAAATGGCTAGAGATTGG+TGG | - | chr8_1:80725706-80725725 | Msa1218160:five_prime_UTR | 40.0% | |
| CAAACTGTGGTAAGAGCTTT+GGG | + | chr8_1:80724551-80724570 | None:intergenic | 40.0% | |
| ACAAACTGTGGTAAGAGCTT+TGG | + | chr8_1:80724552-80724571 | None:intergenic | 40.0% | |
| AGTCGATCCAACACATATTG+AGG | - | chr8_1:80724670-80724689 | Msa1218160:CDS | 40.0% | |
| TAATCACTGCCCCGAAATAT+TGG | - | chr8_1:80724808-80724827 | Msa1218160:CDS | 40.0% | |
| TGTTTAACCAATGTCGTTGG+GGG | - | chr8_1:80724937-80724956 | Msa1218160:intron | 40.0% | |
| TTTATCTGATGTCGACCCAA+TGG | + | chr8_1:80725143-80725162 | None:intergenic | 40.0% | |
| ATGATTGAAGGGGATCCATT+AGG | - | chr8_1:80725289-80725308 | Msa1218160:intron | 40.0% | |
| TGATTGAAGGGGATCCATTA+GGG | - | chr8_1:80725290-80725309 | Msa1218160:intron | 40.0% | |
| TGCTTATGAGGTGAAGTTTG+AGG | - | chr8_1:80725330-80725349 | Msa1218160:intron | 40.0% | |
| ! | TTTGAGGCTACAAATGATGG+AGG | - | chr8_1:80725346-80725365 | Msa1218160:intron | 40.0% |
| GCAAGCAGTTACAAGACTAT+TGG | - | chr8_1:80725385-80725404 | Msa1218160:intron | 40.0% | |
| AGGAAGATGTAAAGGAAGGA+AGG | - | chr8_1:80725425-80725444 | Msa1218160:intron | 40.0% | |
| GGAAGATGTAAAGGAAGGAA+GGG | - | chr8_1:80725426-80725445 | Msa1218160:intron | 40.0% | |
| AACCATAGGGACATTTGGAA+TGG | - | chr8_1:80725637-80725656 | Msa1218160:exon | 40.0% | |
| AACCATTCCAAATGTCCCTA+TGG | + | chr8_1:80725642-80725661 | None:intergenic | 40.0% | |
| ATAGCATGTGTGGCCATAAA+TGG | - | chr8_1:80725692-80725711 | Msa1218160:five_prime_UTR | 40.0% | |
| CACCAATCTCTAGCCATTTA+TGG | + | chr8_1:80725708-80725727 | None:intergenic | 40.0% | |
| CATAAATGGCTAGAGATTGG+TGG | - | chr8_1:80725706-80725725 | Msa1218160:five_prime_UTR | 40.0% | |
| AAAGCTGTGAACATACGCGA+TGG | + | chr8_1:80724504-80724523 | None:intergenic | 45.0% | |
| !! | TGCTTCGGTGGTTTTACCAT+TGG | - | chr8_1:80725124-80725143 | Msa1218160:intron | 45.0% |
| !! | GCTTCGGTGGTTTTACCATT+GGG | - | chr8_1:80725125-80725144 | Msa1218160:intron | 45.0% |
| GATTGAAGGGGATCCATTAG+GGG | - | chr8_1:80725291-80725310 | Msa1218160:intron | 45.0% | |
| GATTCAAGCTTGTCCCCTAA+TGG | + | chr8_1:80725307-80725326 | None:intergenic | 45.0% | |
| !! | GAAGGAAGGGAAAGTACCAT+TGG | - | chr8_1:80725439-80725458 | Msa1218160:intron | 45.0% |
| TGTGCAACCATAGGGACATT+TGG | - | chr8_1:80725632-80725651 | Msa1218160:exon | 45.0% | |
| GGCCATAAATGGCTAGAGAT+TGG | - | chr8_1:80725703-80725722 | Msa1218160:five_prime_UTR | 45.0% | |
| ! | ATGGCTAGAGATTGGTGGTT+TGG | - | chr8_1:80725711-80725730 | Msa1218160:five_prime_UTR | 45.0% |
| AAAGCTGTGAACATACGCGA+TGG | + | chr8_1:80724504-80724523 | None:intergenic | 45.0% | |
| !! | TGCTTCGGTGGTTTTACCAT+TGG | - | chr8_1:80725124-80725143 | Msa1218160:intron | 45.0% |
| !! | GCTTCGGTGGTTTTACCATT+GGG | - | chr8_1:80725125-80725144 | Msa1218160:intron | 45.0% |
| GATTGAAGGGGATCCATTAG+GGG | - | chr8_1:80725291-80725310 | Msa1218160:intron | 45.0% | |
| GATTCAAGCTTGTCCCCTAA+TGG | + | chr8_1:80725307-80725326 | None:intergenic | 45.0% | |
| !! | GAAGGAAGGGAAAGTACCAT+TGG | - | chr8_1:80725439-80725458 | Msa1218160:intron | 45.0% |
| TGTGCAACCATAGGGACATT+TGG | - | chr8_1:80725632-80725651 | Msa1218160:exon | 45.0% | |
| GGCCATAAATGGCTAGAGAT+TGG | - | chr8_1:80725703-80725722 | Msa1218160:five_prime_UTR | 45.0% | |
| ! | ATGGCTAGAGATTGGTGGTT+TGG | - | chr8_1:80725711-80725730 | Msa1218160:five_prime_UTR | 45.0% |
| !!! | CTAAAATTTAATAATTTTTT+TGG | + | chr8_1:80724740-80724759 | None:intergenic | 5.0% |
| !!! | AAATATTGATAAAATATTTT+TGG | - | chr8_1:80725099-80725118 | Msa1218160:intron | 5.0% |
| !!! | CTAAAATTTAATAATTTTTT+TGG | + | chr8_1:80724740-80724759 | None:intergenic | 5.0% |
| !!! | AAATATTGATAAAATATTTT+TGG | - | chr8_1:80725099-80725118 | Msa1218160:intron | 5.0% |
| AGACCAAAGTCTCTCCCTCT+TGG | - | chr8_1:80724378-80724397 | Msa1218160:three_prime_UTR | 50.0% | |
| AGACCAAGAGGGAGAGACTT+TGG | + | chr8_1:80724384-80724403 | None:intergenic | 50.0% | |
| GAACATACGCGATGGTGCAA+CGG | + | chr8_1:80724496-80724515 | None:intergenic | 50.0% | |
| ATTGAAGGAGATGGAGGAGC+TGG | - | chr8_1:80724588-80724607 | Msa1218160:CDS | 50.0% | |
| AAAGAGTCCCCCAACGACAT+TGG | + | chr8_1:80724947-80724966 | None:intergenic | 50.0% | |
| AGACCAAAGTCTCTCCCTCT+TGG | - | chr8_1:80724378-80724397 | Msa1218160:three_prime_UTR | 50.0% | |
| AGACCAAGAGGGAGAGACTT+TGG | + | chr8_1:80724384-80724403 | None:intergenic | 50.0% | |
| GAACATACGCGATGGTGCAA+CGG | + | chr8_1:80724496-80724515 | None:intergenic | 50.0% | |
| ATTGAAGGAGATGGAGGAGC+TGG | - | chr8_1:80724588-80724607 | Msa1218160:CDS | 50.0% | |
| AAAGAGTCCCCCAACGACAT+TGG | + | chr8_1:80724947-80724966 | None:intergenic | 50.0% | |
| ACGCGATGGTGCAACGGTTG+AGG | + | chr8_1:80724490-80724509 | None:intergenic | 60.0% | |
| ACGCGATGGTGCAACGGTTG+AGG | + | chr8_1:80724490-80724509 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 80724302 | 80725801 | 80724302 | ID=Msa1218160;Name=Msa1218160 |
| chr8_1 | mRNA | 80724302 | 80725801 | 80724302 | ID=Msa1218160-mRNA-1;Parent=Msa1218160;Name=Msa1218160-mRNA-1;_AED=0.32;_eAED=0.32;_QI=154|1|1|1|1|1|2|285|160 |
| chr8_1 | exon | 80724302 | 80724885 | 80724302 | ID=Msa1218160-mRNA-1:exon:28446;Parent=Msa1218160-mRNA-1 |
| chr8_1 | exon | 80725464 | 80725801 | 80725464 | ID=Msa1218160-mRNA-1:exon:28445;Parent=Msa1218160-mRNA-1 |
| chr8_1 | five_prime_UTR | 80725648 | 80725801 | 80725648 | ID=Msa1218160-mRNA-1:five_prime_utr;Parent=Msa1218160-mRNA-1 |
| chr8_1 | CDS | 80725464 | 80725647 | 80725464 | ID=Msa1218160-mRNA-1:cds;Parent=Msa1218160-mRNA-1 |
| chr8_1 | CDS | 80724587 | 80724885 | 80724587 | ID=Msa1218160-mRNA-1:cds;Parent=Msa1218160-mRNA-1 |
| chr8_1 | three_prime_UTR | 80724302 | 80724586 | 80724302 | ID=Msa1218160-mRNA-1:three_prime_utr;Parent=Msa1218160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
