Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1218830 | sp|O22900|WRK23_ARATH | 65.455 | 110 | 38 | 0 | 176 | 285 | 140 | 249 | 1.59e-42 | 155 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1218830 | G7JNY7 | 90.307 | 423 | 33 | 4 | 1 | 422 | 5 | 420 | 0.0 | 630 |
Gene ID | Type | Classification |
---|---|---|
Msa1218830 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1218830 | Msa1332940 | 0.884425 | 1.938180e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1218830 | MtrunA17_Chr4g0068541 | 90.307 | 423 | 33 | 4 | 1 | 422 | 5 | 420 | 0.0 | 630 |
Msa1218830 | MtrunA17_Chr2g0294231 | 39.904 | 416 | 162 | 15 | 8 | 410 | 26 | 366 | 2.12e-48 | 169 |
Msa1218830 | MtrunA17_Chr1g0194481 | 36.772 | 378 | 143 | 16 | 38 | 410 | 31 | 317 | 1.80e-41 | 149 |
Msa1218830 | MtrunA17_Chr7g0270191 | 47.059 | 170 | 54 | 4 | 109 | 275 | 74 | 210 | 2.93e-39 | 142 |
Msa1218830 | MtrunA17_Chr5g0418781 | 59.434 | 106 | 40 | 1 | 184 | 289 | 98 | 200 | 4.92e-36 | 133 |
Msa1218830 | MtrunA17_Chr5g0443131 | 69.231 | 78 | 24 | 0 | 197 | 274 | 144 | 221 | 7.87e-34 | 128 |
Msa1218830 | MtrunA17_Chr4g0051881 | 66.667 | 78 | 26 | 0 | 197 | 274 | 165 | 242 | 8.86e-32 | 123 |
Msa1218830 | MtrunA17_Chr8g0335811 | 62.651 | 83 | 31 | 0 | 184 | 266 | 128 | 210 | 1.37e-30 | 117 |
Msa1218830 | MtrunA17_Chr1g0150801 | 65.789 | 76 | 26 | 0 | 191 | 266 | 83 | 158 | 2.17e-29 | 112 |
Msa1218830 | MtrunA17_Chr3g0129321 | 63.514 | 74 | 27 | 0 | 197 | 270 | 105 | 178 | 4.36e-29 | 112 |
Msa1218830 | MtrunA17_Chr3g0129361 | 64.865 | 74 | 26 | 0 | 193 | 266 | 127 | 200 | 1.30e-28 | 112 |
Msa1218830 | MtrunA17_Chr7g0224801 | 65.672 | 67 | 23 | 0 | 200 | 266 | 83 | 149 | 2.71e-27 | 107 |
Msa1218830 | MtrunA17_Chr3g0106491 | 41.176 | 136 | 63 | 1 | 144 | 279 | 316 | 434 | 2.83e-27 | 113 |
Msa1218830 | MtrunA17_Chr3g0106491 | 55.738 | 61 | 26 | 1 | 210 | 270 | 198 | 257 | 5.00e-15 | 77.0 |
Msa1218830 | MtrunA17_Chr8g0383351 | 64.000 | 75 | 26 | 1 | 193 | 266 | 142 | 216 | 3.36e-27 | 108 |
Msa1218830 | MtrunA17_Chr8g0383251 | 35.057 | 174 | 107 | 3 | 112 | 280 | 6 | 178 | 1.61e-26 | 105 |
Msa1218830 | MtrunA17_Chr3g0101131 | 36.842 | 171 | 98 | 3 | 145 | 305 | 341 | 511 | 3.23e-26 | 111 |
Msa1218830 | MtrunA17_Chr3g0101131 | 54.930 | 71 | 31 | 1 | 210 | 280 | 243 | 312 | 1.18e-15 | 79.0 |
Msa1218830 | MtrunA17_Chr4g0042831 | 43.802 | 121 | 61 | 2 | 150 | 270 | 225 | 338 | 3.40e-26 | 108 |
Msa1218830 | MtrunA17_Chr4g0042831 | 55.000 | 60 | 27 | 0 | 210 | 269 | 145 | 204 | 4.28e-17 | 82.4 |
Msa1218830 | MtrunA17_Chr5g0432161 | 36.478 | 159 | 84 | 1 | 112 | 270 | 340 | 481 | 6.77e-26 | 110 |
Msa1218830 | MtrunA17_Chr5g0432161 | 53.333 | 60 | 27 | 1 | 210 | 269 | 244 | 302 | 7.39e-14 | 73.6 |
Msa1218830 | MtrunA17_Chr8g0386241 | 47.475 | 99 | 46 | 1 | 174 | 266 | 61 | 159 | 9.17e-26 | 103 |
Msa1218830 | MtrunA17_Chr5g0445311 | 43.548 | 124 | 58 | 2 | 153 | 270 | 307 | 424 | 4.15e-25 | 107 |
Msa1218830 | MtrunA17_Chr5g0445311 | 60.000 | 60 | 23 | 1 | 210 | 269 | 200 | 258 | 1.53e-15 | 78.6 |
Msa1218830 | MtrunA17_Chr7g0249301 | 55.000 | 80 | 36 | 0 | 191 | 270 | 273 | 352 | 4.56e-25 | 105 |
Msa1218830 | MtrunA17_Chr7g0249301 | 54.098 | 61 | 27 | 1 | 209 | 269 | 61 | 120 | 2.72e-15 | 77.0 |
Msa1218830 | MtrunA17_Chr7g0248721 | 45.038 | 131 | 41 | 5 | 149 | 271 | 102 | 209 | 6.28e-25 | 102 |
Msa1218830 | MtrunA17_Chr3g0079691 | 56.250 | 80 | 35 | 0 | 191 | 270 | 476 | 555 | 6.67e-25 | 107 |
Msa1218830 | MtrunA17_Chr3g0079691 | 50.725 | 69 | 33 | 1 | 210 | 278 | 280 | 347 | 5.62e-16 | 80.1 |
Msa1218830 | MtrunA17_Chr7g0218081 | 56.757 | 74 | 32 | 0 | 197 | 270 | 397 | 470 | 7.54e-25 | 106 |
Msa1218830 | MtrunA17_Chr7g0218081 | 60.000 | 60 | 23 | 1 | 210 | 269 | 228 | 286 | 8.36e-17 | 82.4 |
Msa1218830 | MtrunA17_Chr7g0249311 | 38.000 | 150 | 80 | 3 | 134 | 270 | 303 | 452 | 7.88e-25 | 107 |
Msa1218830 | MtrunA17_Chr7g0249311 | 42.424 | 99 | 52 | 3 | 210 | 308 | 179 | 272 | 1.09e-16 | 82.4 |
Msa1218830 | MtrunA17_Chr5g0418191 | 48.837 | 86 | 44 | 0 | 185 | 270 | 295 | 380 | 1.23e-24 | 105 |
Msa1218830 | MtrunA17_Chr5g0418191 | 61.667 | 60 | 22 | 1 | 210 | 269 | 151 | 209 | 1.19e-17 | 84.7 |
Msa1218830 | MtrunA17_Chr4g0004911 | 37.241 | 145 | 84 | 2 | 126 | 270 | 259 | 396 | 8.62e-24 | 103 |
Msa1218830 | MtrunA17_Chr4g0004911 | 51.471 | 68 | 32 | 1 | 210 | 276 | 184 | 251 | 2.41e-15 | 77.8 |
Msa1218830 | MtrunA17_Chr7g0243891 | 48.315 | 89 | 46 | 0 | 191 | 279 | 355 | 443 | 1.89e-23 | 102 |
Msa1218830 | MtrunA17_Chr7g0243891 | 50.746 | 67 | 32 | 1 | 210 | 276 | 216 | 281 | 4.89e-14 | 73.9 |
Msa1218830 | MtrunA17_Chr7g0263531 | 41.463 | 123 | 63 | 1 | 148 | 270 | 308 | 421 | 6.12e-23 | 100 |
Msa1218830 | MtrunA17_Chr7g0263531 | 36.975 | 119 | 52 | 3 | 211 | 327 | 190 | 287 | 6.77e-16 | 79.3 |
Msa1218830 | MtrunA17_Chr2g0322391 | 48.718 | 78 | 39 | 1 | 193 | 269 | 332 | 409 | 7.63e-22 | 98.2 |
Msa1218830 | MtrunA17_Chr4g0075201 | 39.098 | 133 | 72 | 5 | 144 | 269 | 197 | 327 | 8.37e-22 | 97.4 |
Msa1218830 | MtrunA17_Chr3g0099641 | 47.436 | 78 | 40 | 1 | 193 | 269 | 234 | 311 | 1.35e-21 | 96.7 |
Msa1218830 | MtrunA17_Chr2g0288871 | 48.718 | 78 | 39 | 1 | 193 | 269 | 288 | 365 | 5.79e-21 | 95.1 |
Msa1218830 | MtrunA17_Chr4g0060271 | 40.741 | 108 | 50 | 2 | 177 | 270 | 209 | 316 | 1.04e-20 | 94.7 |
Msa1218830 | MtrunA17_Chr2g0302391 | 32.663 | 199 | 94 | 9 | 194 | 364 | 195 | 381 | 1.20e-20 | 93.6 |
Msa1218830 | MtrunA17_Chr7g0270831 | 36.000 | 150 | 68 | 4 | 121 | 269 | 154 | 276 | 1.88e-20 | 92.8 |
Msa1218830 | MtrunA17_Chr7g0216891 | 40.984 | 122 | 56 | 5 | 150 | 266 | 166 | 276 | 2.73e-20 | 93.2 |
Msa1218830 | MtrunA17_Chr5g0447701 | 50.667 | 75 | 37 | 0 | 196 | 270 | 238 | 312 | 3.64e-20 | 91.7 |
Msa1218830 | MtrunA17_Chr5g0447701 | 52.542 | 59 | 27 | 1 | 211 | 269 | 93 | 150 | 9.17e-12 | 66.2 |
Msa1218830 | MtrunA17_Chr1g0188941 | 47.368 | 76 | 40 | 0 | 194 | 269 | 35 | 110 | 4.64e-20 | 85.1 |
Msa1218830 | MtrunA17_Chr7g0238921 | 54.795 | 73 | 32 | 1 | 197 | 268 | 110 | 182 | 5.39e-20 | 90.1 |
Msa1218830 | MtrunA17_Chr6g0485431 | 44.872 | 78 | 42 | 1 | 197 | 273 | 141 | 218 | 6.52e-20 | 90.5 |
Msa1218830 | MtrunA17_Chr4g0051181 | 48.718 | 78 | 39 | 1 | 194 | 270 | 227 | 304 | 7.82e-20 | 91.7 |
Msa1218830 | MtrunA17_Chr2g0333851 | 49.383 | 81 | 38 | 2 | 192 | 269 | 149 | 229 | 2.15e-19 | 88.6 |
Msa1218830 | MtrunA17_Chr1g0147881 | 39.583 | 96 | 57 | 1 | 186 | 280 | 238 | 333 | 2.70e-19 | 88.6 |
Msa1218830 | MtrunA17_Chr7g0270051 | 34.667 | 150 | 71 | 5 | 182 | 304 | 16 | 165 | 5.43e-19 | 86.3 |
Msa1218830 | MtrunA17_Chr1g0189391 | 48.684 | 76 | 37 | 2 | 197 | 271 | 84 | 158 | 8.16e-19 | 87.0 |
Msa1218830 | MtrunA17_Chr4g0074001 | 40.650 | 123 | 54 | 4 | 148 | 270 | 316 | 419 | 1.70e-18 | 87.4 |
Msa1218830 | MtrunA17_Chr4g0001361 | 43.820 | 89 | 47 | 3 | 184 | 269 | 134 | 222 | 3.04e-18 | 85.1 |
Msa1218830 | MtrunA17_Chr4g0025051 | 46.667 | 75 | 39 | 1 | 196 | 269 | 321 | 395 | 4.17e-18 | 86.7 |
Msa1218830 | MtrunA17_Chr4g0025061 | 46.835 | 79 | 41 | 1 | 193 | 270 | 343 | 421 | 8.74e-18 | 85.5 |
Msa1218830 | MtrunA17_Chr3g0139021 | 41.379 | 87 | 50 | 1 | 181 | 266 | 285 | 371 | 3.89e-17 | 82.8 |
Msa1218830 | MtrunA17_Chr4g0053281 | 43.373 | 83 | 43 | 2 | 188 | 266 | 241 | 323 | 6.05e-17 | 81.6 |
Msa1218830 | MtrunA17_Chr5g0401821 | 43.011 | 93 | 51 | 2 | 186 | 277 | 175 | 266 | 7.45e-17 | 80.1 |
Msa1218830 | MtrunA17_Chr3g0136961 | 48.333 | 60 | 30 | 1 | 208 | 266 | 136 | 195 | 7.97e-17 | 80.5 |
Msa1218830 | MtrunA17_Chr1g0150281 | 45.205 | 73 | 37 | 2 | 197 | 266 | 125 | 197 | 8.48e-17 | 80.5 |
Msa1218830 | MtrunA17_Chr4g0071521 | 38.462 | 91 | 55 | 1 | 186 | 275 | 221 | 311 | 2.20e-16 | 79.7 |
Msa1218830 | MtrunA17_Chr8g0379461 | 47.541 | 61 | 31 | 1 | 211 | 270 | 77 | 137 | 3.83e-16 | 77.8 |
Msa1218830 | MtrunA17_Chr7g0228941 | 49.153 | 59 | 29 | 1 | 211 | 268 | 53 | 111 | 8.29e-16 | 73.6 |
Msa1218830 | MtrunA17_Chr2g0319961 | 35.294 | 102 | 59 | 2 | 176 | 270 | 40 | 141 | 8.41e-16 | 77.0 |
Msa1218830 | MtrunA17_Chr8g0387501 | 48.387 | 62 | 31 | 1 | 209 | 269 | 128 | 189 | 9.23e-16 | 77.0 |
Msa1218830 | MtrunA17_Chr8g0348311 | 48.333 | 60 | 30 | 1 | 211 | 269 | 156 | 215 | 1.16e-15 | 77.8 |
Msa1218830 | MtrunA17_Chr1g0150271 | 41.772 | 79 | 43 | 2 | 194 | 269 | 83 | 161 | 1.57e-15 | 76.3 |
Msa1218830 | MtrunA17_Chr2g0284321 | 46.667 | 60 | 31 | 1 | 211 | 269 | 36 | 95 | 1.76e-15 | 75.1 |
Msa1218830 | MtrunA17_Chr1g0202461 | 38.372 | 86 | 50 | 2 | 185 | 269 | 238 | 321 | 6.48e-15 | 75.9 |
Msa1218830 | MtrunA17_Chr2g0289181 | 45.000 | 60 | 32 | 1 | 211 | 269 | 15 | 74 | 9.59e-15 | 73.6 |
Msa1218830 | MtrunA17_Chr2g0293481 | 45.902 | 61 | 32 | 1 | 211 | 270 | 268 | 328 | 1.32e-14 | 75.5 |
Msa1218830 | MtrunA17_Chr7g0248691 | 37.209 | 86 | 48 | 2 | 186 | 270 | 135 | 215 | 1.55e-14 | 74.3 |
Msa1218830 | MtrunA17_Chr1g0184691 | 38.750 | 80 | 48 | 1 | 188 | 266 | 271 | 350 | 2.56e-14 | 73.9 |
Msa1218830 | MtrunA17_Chr4g0024391 | 40.000 | 70 | 41 | 1 | 193 | 261 | 212 | 281 | 2.85e-13 | 71.2 |
Msa1218830 | MtrunA17_Chr5g0432071 | 48.333 | 60 | 30 | 1 | 210 | 269 | 104 | 162 | 3.32e-13 | 68.6 |
Msa1218830 | MtrunA17_Chr5g0447711 | 41.667 | 72 | 42 | 0 | 198 | 269 | 218 | 289 | 6.09e-13 | 69.3 |
Msa1218830 | MtrunA17_Chr2g0315361 | 39.604 | 101 | 51 | 3 | 173 | 265 | 108 | 206 | 1.61e-12 | 68.2 |
Msa1218830 | MtrunA17_Chr8g0347251 | 45.000 | 60 | 30 | 1 | 209 | 265 | 135 | 194 | 2.03e-12 | 68.2 |
Msa1218830 | MtrunA17_Chr3g0126391 | 48.333 | 60 | 28 | 1 | 209 | 265 | 132 | 191 | 2.41e-12 | 67.8 |
Msa1218830 | MtrunA17_Chr2g0315381 | 38.000 | 100 | 54 | 3 | 173 | 265 | 104 | 202 | 2.61e-12 | 67.4 |
Msa1218830 | MtrunA17_Chr8g0387981 | 37.234 | 94 | 55 | 2 | 175 | 265 | 98 | 190 | 2.73e-12 | 67.8 |
Msa1218830 | MtrunA17_Chr7g0275531 | 46.667 | 60 | 29 | 1 | 209 | 265 | 117 | 176 | 3.31e-12 | 67.4 |
Msa1218830 | MtrunA17_Chr5g0419241 | 52.174 | 46 | 22 | 0 | 193 | 238 | 60 | 105 | 4.72e-12 | 62.4 |
Msa1218830 | MtrunA17_Chr7g0244981 | 44.068 | 59 | 30 | 1 | 210 | 265 | 122 | 180 | 3.18e-11 | 63.9 |
Msa1218830 | MtrunA17_Chr8g0334541 | 31.193 | 109 | 71 | 2 | 160 | 265 | 54 | 161 | 5.89e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1218830 | AT2G47260.1 | 65.455 | 110 | 38 | 0 | 176 | 285 | 140 | 249 | 1.61e-43 | 155 |
Msa1218830 | AT4G18170.1 | 49.143 | 175 | 75 | 5 | 105 | 274 | 71 | 236 | 4.06e-40 | 145 |
Msa1218830 | AT5G49520.1 | 41.202 | 233 | 92 | 6 | 180 | 410 | 191 | 380 | 9.27e-37 | 139 |
Msa1218830 | AT1G69310.4 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.94e-36 | 134 |
Msa1218830 | AT1G69310.2 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.94e-36 | 134 |
Msa1218830 | AT1G69310.1 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.94e-36 | 134 |
Msa1218830 | AT1G29860.1 | 67.073 | 82 | 27 | 0 | 194 | 275 | 120 | 201 | 1.77e-34 | 130 |
Msa1218830 | AT3G62340.1 | 65.116 | 86 | 29 | 1 | 187 | 272 | 96 | 180 | 8.06e-34 | 128 |
Msa1218830 | AT5G46350.1 | 45.833 | 144 | 74 | 1 | 132 | 275 | 109 | 248 | 6.65e-33 | 126 |
Msa1218830 | AT2G44745.1 | 62.353 | 85 | 32 | 0 | 183 | 267 | 118 | 202 | 6.84e-32 | 121 |
Msa1218830 | AT1G69310.3 | 65.476 | 84 | 25 | 1 | 183 | 266 | 120 | 199 | 1.12e-30 | 119 |
Msa1218830 | AT2G46130.1 | 56.044 | 91 | 32 | 1 | 189 | 271 | 9 | 99 | 6.88e-30 | 112 |
Msa1218830 | AT4G39410.1 | 63.529 | 85 | 30 | 1 | 183 | 266 | 195 | 279 | 3.33e-29 | 116 |
Msa1218830 | AT3G01970.1 | 63.380 | 71 | 26 | 0 | 196 | 266 | 51 | 121 | 2.21e-28 | 109 |
Msa1218830 | AT5G13080.1 | 62.857 | 70 | 26 | 0 | 197 | 266 | 54 | 123 | 8.34e-28 | 107 |
Msa1218830 | AT1G64000.1 | 54.255 | 94 | 35 | 1 | 186 | 271 | 90 | 183 | 1.31e-27 | 108 |
Msa1218830 | AT5G41570.1 | 50.000 | 102 | 50 | 1 | 175 | 276 | 64 | 164 | 4.76e-27 | 107 |
Msa1218830 | AT5G26170.1 | 60.274 | 73 | 29 | 0 | 196 | 268 | 99 | 171 | 1.64e-26 | 105 |
Msa1218830 | AT4G26640.5 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.20e-26 | 108 |
Msa1218830 | AT4G26640.5 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1218830 | AT4G26640.6 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.20e-26 | 108 |
Msa1218830 | AT4G26640.6 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1218830 | AT4G26640.4 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.20e-26 | 108 |
Msa1218830 | AT4G26640.4 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1218830 | AT4G26640.3 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.20e-26 | 108 |
Msa1218830 | AT4G26640.3 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1218830 | AT2G21900.1 | 51.111 | 90 | 41 | 1 | 186 | 272 | 82 | 171 | 5.43e-26 | 104 |
Msa1218830 | AT5G07100.2 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.86e-26 | 104 |
Msa1218830 | AT5G07100.2 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1218830 | AT5G07100.4 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.86e-26 | 104 |
Msa1218830 | AT5G07100.4 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1218830 | AT5G07100.5 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.86e-26 | 104 |
Msa1218830 | AT5G07100.5 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1218830 | AT5G07100.3 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.86e-26 | 104 |
Msa1218830 | AT5G07100.3 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1218830 | AT4G26640.1 | 52.747 | 91 | 43 | 0 | 191 | 281 | 290 | 380 | 1.55e-25 | 108 |
Msa1218830 | AT4G26640.1 | 55.714 | 70 | 30 | 1 | 210 | 279 | 139 | 207 | 7.38e-16 | 79.7 |
Msa1218830 | AT2G03340.1 | 36.686 | 169 | 79 | 3 | 130 | 298 | 353 | 493 | 1.59e-25 | 108 |
Msa1218830 | AT2G03340.1 | 60.000 | 60 | 23 | 1 | 210 | 269 | 250 | 308 | 1.20e-16 | 82.4 |
Msa1218830 | AT4G26640.7 | 52.747 | 91 | 43 | 0 | 191 | 281 | 322 | 412 | 1.69e-25 | 108 |
Msa1218830 | AT4G26640.7 | 55.714 | 70 | 30 | 1 | 210 | 279 | 171 | 239 | 8.00e-16 | 79.7 |
Msa1218830 | AT4G26640.2 | 52.747 | 91 | 43 | 0 | 191 | 281 | 362 | 452 | 2.28e-25 | 108 |
Msa1218830 | AT4G26640.2 | 55.714 | 70 | 30 | 1 | 210 | 279 | 211 | 279 | 8.44e-16 | 79.7 |
Msa1218830 | AT5G07100.1 | 48.958 | 96 | 49 | 0 | 188 | 283 | 212 | 307 | 3.08e-25 | 105 |
Msa1218830 | AT5G07100.1 | 50.000 | 60 | 30 | 0 | 210 | 269 | 117 | 176 | 1.33e-13 | 71.6 |
Msa1218830 | AT5G56270.1 | 57.500 | 80 | 34 | 0 | 191 | 270 | 468 | 547 | 3.65e-25 | 108 |
Msa1218830 | AT5G56270.1 | 50.000 | 70 | 34 | 1 | 210 | 279 | 273 | 341 | 6.98e-16 | 80.5 |
Msa1218830 | AT4G26440.1 | 55.294 | 85 | 38 | 0 | 194 | 278 | 356 | 440 | 4.46e-25 | 108 |
Msa1218830 | AT4G26440.1 | 52.174 | 69 | 32 | 1 | 210 | 278 | 178 | 245 | 4.67e-16 | 80.5 |
Msa1218830 | AT1G13960.2 | 58.904 | 73 | 30 | 0 | 197 | 269 | 243 | 315 | 4.70e-25 | 105 |
Msa1218830 | AT1G13960.2 | 55.224 | 67 | 29 | 1 | 210 | 276 | 76 | 141 | 7.30e-17 | 82.0 |
Msa1218830 | AT2G30250.1 | 56.471 | 85 | 37 | 0 | 191 | 275 | 309 | 393 | 8.20e-25 | 105 |
Msa1218830 | AT2G30250.1 | 44.444 | 72 | 39 | 1 | 210 | 281 | 166 | 236 | 3.14e-12 | 68.2 |
Msa1218830 | AT1G13960.1 | 58.904 | 73 | 30 | 0 | 197 | 269 | 396 | 468 | 9.66e-25 | 106 |
Msa1218830 | AT1G13960.1 | 55.224 | 67 | 29 | 1 | 210 | 276 | 229 | 294 | 9.47e-17 | 82.8 |
Msa1218830 | AT2G38470.1 | 55.000 | 80 | 36 | 0 | 191 | 270 | 343 | 422 | 1.09e-24 | 106 |
Msa1218830 | AT2G38470.1 | 53.333 | 60 | 27 | 1 | 210 | 269 | 184 | 242 | 3.15e-13 | 71.6 |
Msa1218830 | AT3G01080.2 | 33.775 | 151 | 79 | 2 | 140 | 269 | 253 | 403 | 1.37e-24 | 105 |
Msa1218830 | AT3G01080.2 | 58.333 | 60 | 24 | 1 | 210 | 269 | 205 | 263 | 2.60e-17 | 84.3 |
Msa1218830 | AT2G46130.2 | 51.648 | 91 | 32 | 2 | 189 | 271 | 9 | 95 | 1.59e-24 | 97.4 |
Msa1218830 | AT3G01080.1 | 57.534 | 73 | 31 | 0 | 197 | 269 | 293 | 365 | 4.48e-24 | 103 |
Msa1218830 | AT3G01080.1 | 58.333 | 60 | 24 | 1 | 210 | 269 | 167 | 225 | 2.71e-17 | 84.0 |
Msa1218830 | AT5G64810.1 | 52.778 | 72 | 34 | 0 | 197 | 268 | 97 | 168 | 1.06e-23 | 98.2 |
Msa1218830 | AT2G04880.2 | 54.054 | 74 | 34 | 0 | 196 | 269 | 269 | 342 | 3.92e-23 | 101 |
Msa1218830 | AT2G04880.2 | 54.839 | 62 | 27 | 1 | 209 | 270 | 110 | 170 | 3.87e-15 | 77.4 |
Msa1218830 | AT2G04880.1 | 54.054 | 74 | 34 | 0 | 196 | 269 | 293 | 366 | 4.27e-23 | 101 |
Msa1218830 | AT2G04880.1 | 54.839 | 62 | 27 | 1 | 209 | 270 | 110 | 170 | 4.14e-15 | 77.4 |
Msa1218830 | AT4G04450.2 | 48.235 | 85 | 42 | 2 | 193 | 275 | 181 | 265 | 2.34e-21 | 96.3 |
Msa1218830 | AT1G55600.1 | 53.425 | 73 | 34 | 0 | 197 | 269 | 294 | 366 | 4.65e-21 | 95.5 |
Msa1218830 | AT4G04450.1 | 48.235 | 85 | 42 | 2 | 193 | 275 | 275 | 359 | 6.53e-21 | 95.5 |
Msa1218830 | AT4G22070.4 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.74e-21 | 95.5 |
Msa1218830 | AT4G22070.3 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.74e-21 | 95.5 |
Msa1218830 | AT4G22070.2 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.74e-21 | 95.5 |
Msa1218830 | AT4G22070.1 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.74e-21 | 95.5 |
Msa1218830 | AT1G62300.1 | 50.000 | 78 | 38 | 1 | 193 | 269 | 295 | 372 | 8.45e-21 | 95.1 |
Msa1218830 | AT5G15130.2 | 48.101 | 79 | 40 | 1 | 193 | 270 | 168 | 246 | 1.56e-20 | 94.0 |
Msa1218830 | AT5G15130.1 | 48.101 | 79 | 40 | 1 | 193 | 270 | 210 | 288 | 1.73e-20 | 94.4 |
Msa1218830 | AT2G37260.2 | 40.367 | 109 | 60 | 2 | 164 | 269 | 223 | 329 | 2.95e-20 | 91.7 |
Msa1218830 | AT2G37260.2 | 50.000 | 80 | 34 | 3 | 211 | 288 | 84 | 159 | 4.17e-15 | 76.6 |
Msa1218830 | AT2G37260.3 | 40.367 | 109 | 60 | 2 | 164 | 269 | 225 | 331 | 2.96e-20 | 92.0 |
Msa1218830 | AT2G37260.3 | 50.000 | 80 | 34 | 3 | 211 | 288 | 86 | 161 | 4.27e-15 | 76.6 |
Msa1218830 | AT4G01720.1 | 44.000 | 100 | 43 | 2 | 171 | 269 | 212 | 299 | 3.17e-20 | 93.2 |
Msa1218830 | AT2G37260.1 | 40.367 | 109 | 60 | 2 | 164 | 269 | 305 | 411 | 3.88e-20 | 92.4 |
Msa1218830 | AT2G37260.1 | 50.000 | 80 | 34 | 3 | 211 | 288 | 166 | 241 | 6.98e-15 | 76.6 |
Msa1218830 | AT1G68150.1 | 48.718 | 78 | 39 | 1 | 194 | 270 | 219 | 296 | 5.87e-20 | 91.3 |
Msa1218830 | AT5G43290.1 | 51.282 | 78 | 36 | 2 | 197 | 272 | 100 | 177 | 3.57e-19 | 87.4 |
Msa1218830 | AT1G18860.1 | 46.154 | 78 | 41 | 1 | 193 | 269 | 222 | 299 | 5.02e-19 | 89.7 |
Msa1218830 | AT4G30935.1 | 38.356 | 146 | 70 | 4 | 126 | 270 | 265 | 391 | 7.17e-19 | 89.0 |
Msa1218830 | AT4G31800.2 | 53.226 | 62 | 28 | 1 | 209 | 269 | 110 | 171 | 1.85e-18 | 84.7 |
Msa1218830 | AT1G80840.1 | 43.000 | 100 | 49 | 4 | 175 | 269 | 110 | 206 | 2.19e-18 | 85.5 |
Msa1218830 | AT4G31800.1 | 53.226 | 62 | 28 | 1 | 209 | 269 | 175 | 236 | 3.64e-18 | 85.1 |
Msa1218830 | AT2G23320.1 | 47.561 | 82 | 42 | 1 | 186 | 266 | 216 | 297 | 5.91e-18 | 84.7 |
Msa1218830 | AT4G31550.2 | 45.122 | 82 | 44 | 1 | 186 | 266 | 221 | 302 | 6.79e-18 | 84.7 |
Msa1218830 | AT3G01080.3 | 58.333 | 60 | 24 | 1 | 210 | 269 | 205 | 263 | 1.12e-17 | 84.0 |
Msa1218830 | AT2G24570.1 | 45.122 | 82 | 44 | 1 | 186 | 266 | 219 | 300 | 1.38e-17 | 83.6 |
Msa1218830 | AT2G25000.2 | 51.613 | 62 | 29 | 1 | 209 | 269 | 102 | 163 | 2.66e-17 | 81.3 |
Msa1218830 | AT2G25000.4 | 51.613 | 62 | 29 | 1 | 209 | 269 | 102 | 163 | 2.66e-17 | 81.3 |
Msa1218830 | AT2G25000.3 | 51.613 | 62 | 29 | 1 | 209 | 269 | 124 | 185 | 4.02e-17 | 80.9 |
Msa1218830 | AT4G31550.1 | 43.902 | 82 | 45 | 1 | 186 | 266 | 222 | 303 | 4.05e-17 | 82.4 |
Msa1218830 | AT2G25000.1 | 51.613 | 62 | 29 | 1 | 209 | 269 | 145 | 206 | 6.08e-17 | 80.9 |
Msa1218830 | AT1G69810.2 | 35.088 | 114 | 64 | 4 | 167 | 278 | 108 | 213 | 1.35e-16 | 80.9 |
Msa1218830 | AT1G69810.1 | 35.088 | 114 | 64 | 4 | 167 | 278 | 166 | 271 | 2.15e-16 | 80.9 |
Msa1218830 | AT2G30590.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 289 | 370 | 2.23e-16 | 80.9 |
Msa1218830 | AT5G52830.1 | 41.860 | 86 | 45 | 3 | 186 | 270 | 145 | 226 | 3.61e-16 | 79.7 |
Msa1218830 | AT1G30650.1 | 40.217 | 92 | 51 | 3 | 183 | 270 | 187 | 278 | 4.78e-16 | 80.1 |
Msa1218830 | AT5G28650.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 238 | 319 | 5.01e-16 | 79.3 |
Msa1218830 | AT1G29280.1 | 43.662 | 71 | 39 | 1 | 201 | 270 | 65 | 135 | 6.74e-16 | 77.8 |
Msa1218830 | AT4G24240.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 257 | 338 | 7.01e-16 | 79.0 |
Msa1218830 | AT3G58710.2 | 40.217 | 92 | 48 | 2 | 185 | 269 | 39 | 130 | 1.08e-15 | 77.4 |
Msa1218830 | AT3G04670.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 238 | 319 | 1.52e-15 | 77.8 |
Msa1218830 | AT3G58710.1 | 32.520 | 123 | 76 | 2 | 154 | 269 | 9 | 131 | 5.00e-15 | 75.5 |
Msa1218830 | AT2G34830.2 | 38.043 | 92 | 53 | 3 | 183 | 270 | 194 | 285 | 5.68e-15 | 77.0 |
Msa1218830 | AT2G34830.1 | 38.043 | 92 | 53 | 3 | 183 | 270 | 185 | 276 | 5.73e-15 | 76.6 |
Msa1218830 | AT4G01250.1 | 36.905 | 84 | 50 | 2 | 187 | 269 | 107 | 188 | 1.18e-14 | 74.7 |
Msa1218830 | AT5G45050.2 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1130 | 1214 | 1.83e-14 | 76.3 |
Msa1218830 | AT5G45050.1 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1158 | 1242 | 1.84e-14 | 76.3 |
Msa1218830 | AT5G45050.4 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1019 | 1103 | 1.89e-14 | 76.3 |
Msa1218830 | AT5G24110.1 | 36.220 | 127 | 70 | 5 | 174 | 295 | 77 | 197 | 6.85e-14 | 72.4 |
Msa1218830 | AT4G23550.1 | 41.333 | 75 | 42 | 2 | 197 | 270 | 128 | 201 | 2.91e-13 | 70.9 |
Msa1218830 | AT4G23810.1 | 35.185 | 108 | 57 | 3 | 165 | 265 | 115 | 216 | 2.39e-12 | 68.2 |
Msa1218830 | AT2G46400.1 | 37.079 | 89 | 53 | 1 | 180 | 265 | 74 | 162 | 2.75e-12 | 67.4 |
Msa1218830 | AT4G11070.2 | 38.202 | 89 | 46 | 3 | 180 | 265 | 85 | 167 | 3.77e-12 | 67.0 |
Msa1218830 | AT1G66560.1 | 45.763 | 59 | 29 | 1 | 210 | 265 | 103 | 161 | 3.90e-12 | 66.6 |
Msa1218830 | AT4G11070.1 | 38.202 | 89 | 46 | 3 | 180 | 265 | 117 | 199 | 4.91e-12 | 67.0 |
Msa1218830 | AT4G12020.6 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.48e-12 | 68.6 |
Msa1218830 | AT4G12020.6 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.08e-11 | 67.8 |
Msa1218830 | AT4G12020.8 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.48e-12 | 68.6 |
Msa1218830 | AT4G12020.8 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.08e-11 | 67.8 |
Msa1218830 | AT4G12020.3 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.48e-12 | 68.6 |
Msa1218830 | AT4G12020.3 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.09e-11 | 67.8 |
Msa1218830 | AT4G12020.7 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.78e-12 | 68.2 |
Msa1218830 | AT4G12020.7 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.19e-11 | 67.4 |
Msa1218830 | AT4G12020.10 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.89e-12 | 68.2 |
Msa1218830 | AT4G12020.10 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.08e-11 | 67.8 |
Msa1218830 | AT4G12020.1 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.91e-12 | 68.2 |
Msa1218830 | AT4G12020.1 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.16e-11 | 67.4 |
Msa1218830 | AT4G12020.9 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.91e-12 | 68.2 |
Msa1218830 | AT4G12020.9 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.16e-11 | 67.4 |
Msa1218830 | AT4G12020.4 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.08e-12 | 68.2 |
Msa1218830 | AT4G12020.4 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.09e-11 | 67.8 |
Msa1218830 | AT4G12020.2 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.09e-12 | 68.2 |
Msa1218830 | AT4G12020.2 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.16e-11 | 67.4 |
Msa1218830 | AT4G12020.5 | 43.678 | 87 | 37 | 3 | 148 | 230 | 516 | 594 | 8.18e-12 | 68.2 |
Msa1218830 | AT4G12020.5 | 46.774 | 62 | 32 | 1 | 208 | 269 | 399 | 459 | 1.25e-11 | 67.4 |
Msa1218830 | AT4G12020.11 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 8.54e-12 | 67.8 |
Msa1218830 | AT4G12020.11 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.47e-11 | 67.0 |
Msa1218830 | AT1G66600.1 | 37.500 | 88 | 50 | 2 | 183 | 265 | 74 | 161 | 1.18e-11 | 65.1 |
Msa1218830 | AT5G45260.1 | 37.500 | 96 | 53 | 3 | 179 | 269 | 1177 | 1270 | 2.23e-11 | 66.6 |
Msa1218830 | AT5G01900.1 | 34.234 | 111 | 64 | 3 | 184 | 289 | 82 | 188 | 2.62e-11 | 64.3 |
Msa1218830 | AT3G56400.1 | 27.322 | 183 | 97 | 4 | 94 | 265 | 21 | 178 | 6.14e-11 | 63.5 |
Msa1218830 | AT2G40750.1 | 37.634 | 93 | 47 | 3 | 180 | 265 | 122 | 210 | 7.74e-11 | 63.5 |
Find 100 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTGTTCTTCTTCTTCTT+TGG | 0.208653 | 8_1:-81532470 | None:intergenic |
TTTCCCTTGTTCTTCTTGTT+TGG | 0.224161 | 8_1:-81531621 | None:intergenic |
GTTCAAAATCAAGACAATTA+TGG | 0.244462 | 8_1:+81533355 | Msa1218830:CDS |
ATGAACTCTTCAACATCTTT+TGG | 0.249819 | 8_1:+81533325 | Msa1218830:CDS |
TCAGCTTCATATTCATTCTT+TGG | 0.251845 | 8_1:-81533491 | None:intergenic |
GGGATCATGCCTGATACTTC+TGG | 0.288980 | 8_1:+81533064 | Msa1218830:CDS |
TCTTCTGCTTCATCTCCTTC+AGG | 0.297610 | 8_1:-81532038 | None:intergenic |
CAACAATCTTCTTCCTTTGC+TGG | 0.300661 | 8_1:+81531732 | Msa1218830:CDS |
GTTGTTGGTAGTTCTATTCT+TGG | 0.310119 | 8_1:+81533130 | Msa1218830:CDS |
GGTTATAGGTGGCGCAAATA+TGG | 0.310546 | 8_1:+81532551 | Msa1218830:CDS |
GTCTTGAAAGTAACTCTTGC+TGG | 0.321436 | 8_1:-81532500 | None:intergenic |
GATGTTGGTGGACCTGTTCT+TGG | 0.334569 | 8_1:-81533090 | None:intergenic |
GTCTGCAACAACAGCTTCAT+TGG | 0.352883 | 8_1:-81531967 | None:intergenic |
GTATGTATATACCTGGGAAA+TGG | 0.359230 | 8_1:-81532596 | None:intergenic |
GAGGAACAATGGACTTCTTC+AGG | 0.361888 | 8_1:+81533432 | Msa1218830:CDS |
CTTCTTCTACTTTATTCGAT+TGG | 0.383790 | 8_1:+81531793 | Msa1218830:CDS |
ATCACTTGGATGATGGTTAT+AGG | 0.391942 | 8_1:+81532537 | Msa1218830:CDS |
TACTTCTGGTTTCCAAGAAC+AGG | 0.411828 | 8_1:+81533078 | Msa1218830:CDS |
TCTTGGAAACCAGAAGTATC+AGG | 0.414512 | 8_1:-81533073 | None:intergenic |
TGTTGAAGGAGTTGTTATAA+TGG | 0.415426 | 8_1:-81533261 | None:intergenic |
GATGACAAATACTAATGATA+TGG | 0.419528 | 8_1:+81533408 | Msa1218830:CDS |
ACAACAATATCAAAGATTTC+AGG | 0.427809 | 8_1:+81533177 | Msa1218830:CDS |
TTAGCAGCACGCAATAGAAC+CGG | 0.432507 | 8_1:-81533037 | None:intergenic |
CCAGCTCCTCCCATCTCCAT+TGG | 0.441565 | 8_1:-81533466 | None:intergenic |
CTATTGCGTGCTGCTAACCT+TGG | 0.442428 | 8_1:+81533043 | Msa1218830:CDS |
TGAAGAAATTGAAGAAGAAA+CGG | 0.446413 | 8_1:-81531940 | None:intergenic |
GAAGAGAAAGATGAAGATGA+TGG | 0.447085 | 8_1:+81532056 | Msa1218830:CDS |
GCCGGGGACTGTACCGGTAA+AGG | 0.449845 | 8_1:-81531879 | None:intergenic |
TCAGGATATGATTGCTCCAA+TGG | 0.449887 | 8_1:+81533450 | Msa1218830:CDS |
AACAAGAAGAACAAGGGAAA+GGG | 0.454015 | 8_1:+81531624 | Msa1218830:CDS |
TATTGCGTGCTGCTAACCTT+GGG | 0.464715 | 8_1:+81533044 | Msa1218830:CDS |
AGGAGGCAGCTGGGTGGTGA+AGG | 0.469762 | 8_1:-81531859 | None:intergenic |
TCCTTTACCGGTACAGTCCC+CGG | 0.470396 | 8_1:+81531878 | Msa1218830:CDS |
CCAATGGAGATGGGAGGAGC+TGG | 0.477280 | 8_1:+81533466 | Msa1218830:CDS |
GAAGAAGCGTATTGAGCGTT+CGG | 0.479281 | 8_1:+81532958 | Msa1218830:CDS |
GATGGTAAAGCAGGCGAGAA+AGG | 0.479606 | 8_1:-81531666 | None:intergenic |
CAGCTGGGTGGTGAAGGTGG+TGG | 0.481535 | 8_1:-81531853 | None:intergenic |
ATTGAAGAAGAAACGGAGAC+AGG | 0.485157 | 8_1:-81531933 | None:intergenic |
TGGGTGGTGAAGGTGGTGGA+AGG | 0.485262 | 8_1:-81531849 | None:intergenic |
AACACAACTAGCGGTGTTGT+TGG | 0.487241 | 8_1:+81533115 | Msa1218830:CDS |
AGGCAGCTGGGTGGTGAAGG+TGG | 0.493908 | 8_1:-81531856 | None:intergenic |
TATGTATATACCTGGGAAAT+GGG | 0.497210 | 8_1:-81532595 | None:intergenic |
GTGGTGAAGGTGGTGGAAGG+TGG | 0.497652 | 8_1:-81531846 | None:intergenic |
CGCTAGTTGTGTTGTGATGT+TGG | 0.499668 | 8_1:-81533105 | None:intergenic |
TCAAGACCTCAGACGCGGCC+GGG | 0.504762 | 8_1:-81531896 | None:intergenic |
CAAAAGTGGAGAAATGTTGA+AGG | 0.511250 | 8_1:-81533275 | None:intergenic |
GACGCGGCCGGGGACTGTAC+CGG | 0.513396 | 8_1:-81531885 | None:intergenic |
GAAACGGAGACAGGGGTGGC+CGG | 0.514502 | 8_1:-81531924 | None:intergenic |
TTCAAGACCTCAGACGCGGC+CGG | 0.517112 | 8_1:-81531897 | None:intergenic |
TGCTGACATGTCAGTATCAA+TGG | 0.518443 | 8_1:-81531823 | None:intergenic |
TATGATTGCTCCAATGGAGA+TGG | 0.522436 | 8_1:+81533456 | Msa1218830:CDS |
GTCTGAGGTCTTGAATAATC+CGG | 0.530333 | 8_1:+81531905 | Msa1218830:CDS |
GTACCGGTAAAGGAGGCAGC+TGG | 0.531164 | 8_1:-81531869 | None:intergenic |
AAAGAGCGATGTTGATCACT+TGG | 0.537217 | 8_1:+81532523 | Msa1218830:CDS |
TAGCAGCACGCAATAGAACC+GGG | 0.537381 | 8_1:-81533036 | None:intergenic |
ATCGTGCTAACCAGCTATGA+AGG | 0.539477 | 8_1:+81532995 | Msa1218830:CDS |
TGGCTATTATATAACAAAGA+TGG | 0.540939 | 8_1:-81533241 | None:intergenic |
CAAGACCTCAGACGCGGCCG+GGG | 0.541690 | 8_1:-81531895 | None:intergenic |
ATGGTAAAGCAGGCGAGAAA+GGG | 0.542073 | 8_1:-81531665 | None:intergenic |
GATGTTGATCACTTGGATGA+TGG | 0.548334 | 8_1:+81532530 | Msa1218830:CDS |
ATGCTGCATGATGGTAAAGC+AGG | 0.549344 | 8_1:-81531675 | None:intergenic |
TTGAAGAAGAAACGGAGACA+GGG | 0.550922 | 8_1:-81531932 | None:intergenic |
CACAGCTCGCGGCGGTGCAA+CGG | 0.551216 | 8_1:-81532931 | None:intergenic |
AATCAAGACAATTATGGTGG+AGG | 0.551997 | 8_1:+81533361 | Msa1218830:CDS |
AGTGTGTTGACCTTCATAGC+TGG | 0.555566 | 8_1:-81533005 | None:intergenic |
GAGTTAACAACATTCAAAAG+TGG | 0.557077 | 8_1:-81533289 | None:intergenic |
AATGATATGGTGAGGAACAA+TGG | 0.574084 | 8_1:+81533421 | Msa1218830:CDS |
TACCGGTAAAGGAGGCAGCT+GGG | 0.581455 | 8_1:-81531868 | None:intergenic |
ATGATTGCTCCAATGGAGAT+GGG | 0.584840 | 8_1:+81533457 | Msa1218830:CDS |
AAACAAGAAGAACAAGGGAA+AGG | 0.586833 | 8_1:+81531623 | Msa1218830:CDS |
CAAATCGATGTAACCAGCAA+AGG | 0.591633 | 8_1:-81531745 | None:intergenic |
TGATCATCAGATTGTGATGG+TGG | 0.592260 | 8_1:-81531711 | None:intergenic |
AAGTATCAGGCATGATCCCA+AGG | 0.599595 | 8_1:-81533060 | None:intergenic |
GGGGACTGTACCGGTAAAGG+AGG | 0.603300 | 8_1:-81531876 | None:intergenic |
CAAAATCAAGACAATTATGG+TGG | 0.615149 | 8_1:+81533358 | Msa1218830:CDS |
CACGCAATAGAACCGGGGAT+AGG | 0.618953 | 8_1:-81533030 | None:intergenic |
GATTCCAAACAAGAAGAACA+AGG | 0.625236 | 8_1:+81531617 | Msa1218830:CDS |
TTGCACCGCCGCGAGCTGTG+AGG | 0.633888 | 8_1:+81532934 | Msa1218830:CDS |
TCAACACACTCACCTATCCC+CGG | 0.641094 | 8_1:+81533018 | Msa1218830:CDS |
CTTCTTCACCTCACAGCTCG+CGG | 0.648825 | 8_1:-81532942 | None:intergenic |
TAGTTGTGTTGTGATGTTGG+TGG | 0.651734 | 8_1:-81533102 | None:intergenic |
ATGTCAAAGATGCTGCATGA+TGG | 0.652263 | 8_1:-81531684 | None:intergenic |
CTTCACCTCACAGCTCGCGG+CGG | 0.653337 | 8_1:-81532939 | None:intergenic |
TGTTGATCATCAGATTGTGA+TGG | 0.660250 | 8_1:-81531714 | None:intergenic |
ATTCCAAACAAGAAGAACAA+GGG | 0.661863 | 8_1:+81531618 | Msa1218830:CDS |
CAACATCACAACACAACTAG+CGG | 0.662877 | 8_1:+81533106 | Msa1218830:CDS |
ATAGCTGGTTAGCACGATCG+AGG | 0.663350 | 8_1:-81532990 | None:intergenic |
TAAGCGTTCAAGAAAGAACA+TGG | 0.664199 | 8_1:+81531563 | Msa1218830:exon |
GAACATGAAGAAGAACCTGA+AGG | 0.667636 | 8_1:+81532023 | Msa1218830:CDS |
CAAATACTAATGATATGGTG+AGG | 0.667790 | 8_1:+81533413 | Msa1218830:CDS |
GACATGTCAGTATCAATGGT+GGG | 0.669023 | 8_1:-81531819 | None:intergenic |
TGAAGAAGAAACGGAGACAG+GGG | 0.670576 | 8_1:-81531931 | None:intergenic |
ACTTGGATGATGGTTATAGG+TGG | 0.678436 | 8_1:+81532540 | Msa1218830:CDS |
GATCATCAGATTGTGATGGT+GGG | 0.680288 | 8_1:-81531710 | None:intergenic |
AGAAGAAACGGAGACAGGGG+TGG | 0.684451 | 8_1:-81531928 | None:intergenic |
ATTGCTCCAATGGAGATGGG+AGG | 0.700394 | 8_1:+81533460 | Msa1218830:CDS |
TGACATGTCAGTATCAATGG+TGG | 0.704204 | 8_1:-81531820 | None:intergenic |
CGGTAAAGGAGGCAGCTGGG+TGG | 0.705876 | 8_1:-81531865 | None:intergenic |
ATTATTCAAGACCTCAGACG+CGG | 0.727700 | 8_1:-81531901 | None:intergenic |
AGCAGCACGCAATAGAACCG+GGG | 0.748027 | 8_1:-81533035 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATAATCTAAAGAAA+GGG | - | chr8_1:81532746-81532765 | None:intergenic | 10.0% |
!! | TATATATATAATCTAAAGAA+AGG | - | chr8_1:81532747-81532766 | None:intergenic | 10.0% |
!! | ATATATATAATCTAAAGAAA+GGG | - | chr8_1:81532746-81532765 | None:intergenic | 10.0% |
!! | TATATATATAATCTAAAGAA+AGG | - | chr8_1:81532747-81532766 | None:intergenic | 10.0% |
!!! | AAAAAAAGTTCAATTTTAGA+GGG | - | chr8_1:81532714-81532733 | None:intergenic | 15.0% |
!!! | AAAAAAAAGTTCAATTTTAG+AGG | - | chr8_1:81532715-81532734 | None:intergenic | 15.0% |
!!! | AAAAAAAGTTCAATTTTAGA+GGG | - | chr8_1:81532714-81532733 | None:intergenic | 15.0% |
!!! | AAAAAAAAGTTCAATTTTAG+AGG | - | chr8_1:81532715-81532734 | None:intergenic | 15.0% |
!! | CTAACATACATTAAACAAAA+CGG | - | chr8_1:81532349-81532368 | None:intergenic | 20.0% |
!! | TTTGACAATAAGAAAAGTAA+TGG | + | chr8_1:81532369-81532388 | Msa1218830:intron | 20.0% |
!! | CTAACATACATTAAACAAAA+CGG | - | chr8_1:81532349-81532368 | None:intergenic | 20.0% |
!! | TTTGACAATAAGAAAAGTAA+TGG | + | chr8_1:81532369-81532388 | Msa1218830:intron | 20.0% |
! | TGAAGAAATTGAAGAAGAAA+CGG | - | chr8_1:81531943-81531962 | None:intergenic | 25.0% |
!! | ATTAATCTGTTTGGTGATAT+AGG | + | chr8_1:81532441-81532460 | Msa1218830:intron | 25.0% |
!! | GTAATAGTATCTTGATTTGA+TGG | - | chr8_1:81532627-81532646 | None:intergenic | 25.0% |
! | AAGAAAAAAGTGAGCTAAAT+TGG | - | chr8_1:81532857-81532876 | None:intergenic | 25.0% |
! | ACAACAATATCAAAGATTTC+AGG | + | chr8_1:81533177-81533196 | Msa1218830:CDS | 25.0% |
! | TGGCTATTATATAACAAAGA+TGG | - | chr8_1:81533244-81533263 | None:intergenic | 25.0% |
! | GTTCAAAATCAAGACAATTA+TGG | + | chr8_1:81533355-81533374 | Msa1218830:CDS | 25.0% |
! | GATGACAAATACTAATGATA+TGG | + | chr8_1:81533408-81533427 | Msa1218830:CDS | 25.0% |
! | TGAAGAAATTGAAGAAGAAA+CGG | - | chr8_1:81531943-81531962 | None:intergenic | 25.0% |
!! | ATTAATCTGTTTGGTGATAT+AGG | + | chr8_1:81532441-81532460 | Msa1218830:intron | 25.0% |
!! | GTAATAGTATCTTGATTTGA+TGG | - | chr8_1:81532627-81532646 | None:intergenic | 25.0% |
! | AAGAAAAAAGTGAGCTAAAT+TGG | - | chr8_1:81532857-81532876 | None:intergenic | 25.0% |
! | ACAACAATATCAAAGATTTC+AGG | + | chr8_1:81533177-81533196 | Msa1218830:CDS | 25.0% |
! | TGGCTATTATATAACAAAGA+TGG | - | chr8_1:81533244-81533263 | None:intergenic | 25.0% |
! | GTTCAAAATCAAGACAATTA+TGG | + | chr8_1:81533355-81533374 | Msa1218830:CDS | 25.0% |
! | GATGACAAATACTAATGATA+TGG | + | chr8_1:81533408-81533427 | Msa1218830:CDS | 25.0% |
ATTCCAAACAAGAAGAACAA+GGG | + | chr8_1:81531618-81531637 | Msa1218830:CDS | 30.0% | |
CTTCTTCTACTTTATTCGAT+TGG | + | chr8_1:81531793-81531812 | Msa1218830:CDS | 30.0% | |
GTGTATTCAATTACTTTGAG+CGG | + | chr8_1:81532275-81532294 | Msa1218830:intron | 30.0% | |
TGTATTCAATTACTTTGAGC+GGG | + | chr8_1:81532276-81532295 | Msa1218830:intron | 30.0% | |
CTGAAACTGATTAATCTGTT+TGG | + | chr8_1:81532432-81532451 | Msa1218830:intron | 30.0% | |
TTCTTGTTCTTCTTCTTCTT+TGG | - | chr8_1:81532473-81532492 | None:intergenic | 30.0% | |
TATGTATATACCTGGGAAAT+GGG | - | chr8_1:81532598-81532617 | None:intergenic | 30.0% | |
GTACATGTATGTATATACCT+GGG | - | chr8_1:81532605-81532624 | None:intergenic | 30.0% | |
!! | AAAAGTTCAATTTTAGAGGG+AGG | - | chr8_1:81532711-81532730 | None:intergenic | 30.0% |
TGTTGAAGGAGTTGTTATAA+TGG | - | chr8_1:81533264-81533283 | None:intergenic | 30.0% | |
GAGTTAACAACATTCAAAAG+TGG | - | chr8_1:81533292-81533311 | None:intergenic | 30.0% | |
! | ATGAACTCTTCAACATCTTT+TGG | + | chr8_1:81533325-81533344 | Msa1218830:CDS | 30.0% |
CAAAATCAAGACAATTATGG+TGG | + | chr8_1:81533358-81533377 | Msa1218830:CDS | 30.0% | |
CAAATACTAATGATATGGTG+AGG | + | chr8_1:81533413-81533432 | Msa1218830:CDS | 30.0% | |
ATTCCAAACAAGAAGAACAA+GGG | + | chr8_1:81531618-81531637 | Msa1218830:CDS | 30.0% | |
CTTCTTCTACTTTATTCGAT+TGG | + | chr8_1:81531793-81531812 | Msa1218830:CDS | 30.0% | |
GTGTATTCAATTACTTTGAG+CGG | + | chr8_1:81532275-81532294 | Msa1218830:intron | 30.0% | |
TGTATTCAATTACTTTGAGC+GGG | + | chr8_1:81532276-81532295 | Msa1218830:intron | 30.0% | |
CTGAAACTGATTAATCTGTT+TGG | + | chr8_1:81532432-81532451 | Msa1218830:intron | 30.0% | |
TTCTTGTTCTTCTTCTTCTT+TGG | - | chr8_1:81532473-81532492 | None:intergenic | 30.0% | |
TATGTATATACCTGGGAAAT+GGG | - | chr8_1:81532598-81532617 | None:intergenic | 30.0% | |
GTACATGTATGTATATACCT+GGG | - | chr8_1:81532605-81532624 | None:intergenic | 30.0% | |
!! | AAAAGTTCAATTTTAGAGGG+AGG | - | chr8_1:81532711-81532730 | None:intergenic | 30.0% |
TGTTGAAGGAGTTGTTATAA+TGG | - | chr8_1:81533264-81533283 | None:intergenic | 30.0% | |
GAGTTAACAACATTCAAAAG+TGG | - | chr8_1:81533292-81533311 | None:intergenic | 30.0% | |
! | ATGAACTCTTCAACATCTTT+TGG | + | chr8_1:81533325-81533344 | Msa1218830:CDS | 30.0% |
CAAAATCAAGACAATTATGG+TGG | + | chr8_1:81533358-81533377 | Msa1218830:CDS | 30.0% | |
CAAATACTAATGATATGGTG+AGG | + | chr8_1:81533413-81533432 | Msa1218830:CDS | 30.0% | |
TAAGCGTTCAAGAAAGAACA+TGG | + | chr8_1:81531563-81531582 | Msa1218830:exon | 35.0% | |
! | TCTTCAACAACAGCATTTTC+AGG | + | chr8_1:81531591-81531610 | Msa1218830:CDS | 35.0% |
GATTCCAAACAAGAAGAACA+AGG | + | chr8_1:81531617-81531636 | Msa1218830:CDS | 35.0% | |
TTTCCCTTGTTCTTCTTGTT+TGG | - | chr8_1:81531624-81531643 | None:intergenic | 35.0% | |
AAACAAGAAGAACAAGGGAA+AGG | + | chr8_1:81531623-81531642 | Msa1218830:CDS | 35.0% | |
AACAAGAAGAACAAGGGAAA+GGG | + | chr8_1:81531624-81531643 | Msa1218830:CDS | 35.0% | |
TGTTGATCATCAGATTGTGA+TGG | - | chr8_1:81531717-81531736 | None:intergenic | 35.0% | |
GAAGAGAAAGATGAAGATGA+TGG | + | chr8_1:81532056-81532075 | Msa1218830:CDS | 35.0% | |
GTATTCAATTACTTTGAGCG+GGG | + | chr8_1:81532277-81532296 | Msa1218830:intron | 35.0% | |
! | ATCACTTGGATGATGGTTAT+AGG | + | chr8_1:81532537-81532556 | Msa1218830:CDS | 35.0% |
GTATGTATATACCTGGGAAA+TGG | - | chr8_1:81532599-81532618 | None:intergenic | 35.0% | |
GGTACATGTATGTATATACC+TGG | - | chr8_1:81532606-81532625 | None:intergenic | 35.0% | |
! | ACTTTTGCACTCAGATCTAA+AGG | - | chr8_1:81532654-81532673 | None:intergenic | 35.0% |
TTATCTTGTGTGTGCAAAAC+AGG | + | chr8_1:81532900-81532919 | Msa1218830:intron | 35.0% | |
!! | GTTGTTGGTAGTTCTATTCT+TGG | + | chr8_1:81533130-81533149 | Msa1218830:CDS | 35.0% |
CAAAAGTGGAGAAATGTTGA+AGG | - | chr8_1:81533278-81533297 | None:intergenic | 35.0% | |
! | AACTCTTCAACATCTTTTGG+TGG | + | chr8_1:81533328-81533347 | Msa1218830:CDS | 35.0% |
AATCAAGACAATTATGGTGG+AGG | + | chr8_1:81533361-81533380 | Msa1218830:CDS | 35.0% | |
AATGATATGGTGAGGAACAA+TGG | + | chr8_1:81533421-81533440 | Msa1218830:CDS | 35.0% | |
TAAGCGTTCAAGAAAGAACA+TGG | + | chr8_1:81531563-81531582 | Msa1218830:exon | 35.0% | |
! | TCTTCAACAACAGCATTTTC+AGG | + | chr8_1:81531591-81531610 | Msa1218830:CDS | 35.0% |
GATTCCAAACAAGAAGAACA+AGG | + | chr8_1:81531617-81531636 | Msa1218830:CDS | 35.0% | |
TTTCCCTTGTTCTTCTTGTT+TGG | - | chr8_1:81531624-81531643 | None:intergenic | 35.0% | |
AAACAAGAAGAACAAGGGAA+AGG | + | chr8_1:81531623-81531642 | Msa1218830:CDS | 35.0% | |
AACAAGAAGAACAAGGGAAA+GGG | + | chr8_1:81531624-81531643 | Msa1218830:CDS | 35.0% | |
TGTTGATCATCAGATTGTGA+TGG | - | chr8_1:81531717-81531736 | None:intergenic | 35.0% | |
GAAGAGAAAGATGAAGATGA+TGG | + | chr8_1:81532056-81532075 | Msa1218830:CDS | 35.0% | |
GTATTCAATTACTTTGAGCG+GGG | + | chr8_1:81532277-81532296 | Msa1218830:intron | 35.0% | |
! | ATCACTTGGATGATGGTTAT+AGG | + | chr8_1:81532537-81532556 | Msa1218830:CDS | 35.0% |
GTATGTATATACCTGGGAAA+TGG | - | chr8_1:81532599-81532618 | None:intergenic | 35.0% | |
GGTACATGTATGTATATACC+TGG | - | chr8_1:81532606-81532625 | None:intergenic | 35.0% | |
! | ACTTTTGCACTCAGATCTAA+AGG | - | chr8_1:81532654-81532673 | None:intergenic | 35.0% |
TTATCTTGTGTGTGCAAAAC+AGG | + | chr8_1:81532900-81532919 | Msa1218830:intron | 35.0% | |
!! | GTTGTTGGTAGTTCTATTCT+TGG | + | chr8_1:81533130-81533149 | Msa1218830:CDS | 35.0% |
CAAAAGTGGAGAAATGTTGA+AGG | - | chr8_1:81533278-81533297 | None:intergenic | 35.0% | |
! | AACTCTTCAACATCTTTTGG+TGG | + | chr8_1:81533328-81533347 | Msa1218830:CDS | 35.0% |
AATCAAGACAATTATGGTGG+AGG | + | chr8_1:81533361-81533380 | Msa1218830:CDS | 35.0% | |
AATGATATGGTGAGGAACAA+TGG | + | chr8_1:81533421-81533440 | Msa1218830:CDS | 35.0% | |
ATGTCAAAGATGCTGCATGA+TGG | - | chr8_1:81531687-81531706 | None:intergenic | 40.0% | |
GATCATCAGATTGTGATGGT+GGG | - | chr8_1:81531713-81531732 | None:intergenic | 40.0% | |
TGATCATCAGATTGTGATGG+TGG | - | chr8_1:81531714-81531733 | None:intergenic | 40.0% | |
CAACAATCTTCTTCCTTTGC+TGG | + | chr8_1:81531732-81531751 | Msa1218830:CDS | 40.0% | |
CAAATCGATGTAACCAGCAA+AGG | - | chr8_1:81531748-81531767 | None:intergenic | 40.0% | |
GACATGTCAGTATCAATGGT+GGG | - | chr8_1:81531822-81531841 | None:intergenic | 40.0% | |
TGACATGTCAGTATCAATGG+TGG | - | chr8_1:81531823-81531842 | None:intergenic | 40.0% | |
TGCTGACATGTCAGTATCAA+TGG | - | chr8_1:81531826-81531845 | None:intergenic | 40.0% | |
ATTATTCAAGACCTCAGACG+CGG | - | chr8_1:81531904-81531923 | None:intergenic | 40.0% | |
! | GTCTGAGGTCTTGAATAATC+CGG | + | chr8_1:81531905-81531924 | Msa1218830:CDS | 40.0% |
TTGAAGAAGAAACGGAGACA+GGG | - | chr8_1:81531935-81531954 | None:intergenic | 40.0% | |
ATTGAAGAAGAAACGGAGAC+AGG | - | chr8_1:81531936-81531955 | None:intergenic | 40.0% | |
GAACATGAAGAAGAACCTGA+AGG | + | chr8_1:81532023-81532042 | Msa1218830:CDS | 40.0% | |
AGCAGTTACAAATGAAGACG+AGG | + | chr8_1:81532217-81532236 | Msa1218830:intron | 40.0% | |
ACTGACAACAGTGAATAACC+CGG | - | chr8_1:81532306-81532325 | None:intergenic | 40.0% | |
AACAAAACGGCAAGAACACA+TGG | - | chr8_1:81532336-81532355 | None:intergenic | 40.0% | |
GTCTTGAAAGTAACTCTTGC+TGG | - | chr8_1:81532503-81532522 | None:intergenic | 40.0% | |
AAAGAGCGATGTTGATCACT+TGG | + | chr8_1:81532523-81532542 | Msa1218830:CDS | 40.0% | |
GATGTTGATCACTTGGATGA+TGG | + | chr8_1:81532530-81532549 | Msa1218830:CDS | 40.0% | |
! | ACTTGGATGATGGTTATAGG+TGG | + | chr8_1:81532540-81532559 | Msa1218830:CDS | 40.0% |
!!! | GGCTGTTTTTGACTGGTTTT+TGG | - | chr8_1:81532577-81532596 | None:intergenic | 40.0% |
!! | TCTTGGAAACCAGAAGTATC+AGG | - | chr8_1:81533076-81533095 | None:intergenic | 40.0% |
!! | TACTTCTGGTTTCCAAGAAC+AGG | + | chr8_1:81533078-81533097 | Msa1218830:CDS | 40.0% |
TAGTTGTGTTGTGATGTTGG+TGG | - | chr8_1:81533105-81533124 | None:intergenic | 40.0% | |
CAACATCACAACACAACTAG+CGG | + | chr8_1:81533106-81533125 | Msa1218830:CDS | 40.0% | |
TCAGGATATGATTGCTCCAA+TGG | + | chr8_1:81533450-81533469 | Msa1218830:CDS | 40.0% | |
TATGATTGCTCCAATGGAGA+TGG | + | chr8_1:81533456-81533475 | Msa1218830:CDS | 40.0% | |
ATGATTGCTCCAATGGAGAT+GGG | + | chr8_1:81533457-81533476 | Msa1218830:CDS | 40.0% | |
ATGTCAAAGATGCTGCATGA+TGG | - | chr8_1:81531687-81531706 | None:intergenic | 40.0% | |
GATCATCAGATTGTGATGGT+GGG | - | chr8_1:81531713-81531732 | None:intergenic | 40.0% | |
TGATCATCAGATTGTGATGG+TGG | - | chr8_1:81531714-81531733 | None:intergenic | 40.0% | |
CAACAATCTTCTTCCTTTGC+TGG | + | chr8_1:81531732-81531751 | Msa1218830:CDS | 40.0% | |
CAAATCGATGTAACCAGCAA+AGG | - | chr8_1:81531748-81531767 | None:intergenic | 40.0% | |
GACATGTCAGTATCAATGGT+GGG | - | chr8_1:81531822-81531841 | None:intergenic | 40.0% | |
TGACATGTCAGTATCAATGG+TGG | - | chr8_1:81531823-81531842 | None:intergenic | 40.0% | |
TGCTGACATGTCAGTATCAA+TGG | - | chr8_1:81531826-81531845 | None:intergenic | 40.0% | |
ATTATTCAAGACCTCAGACG+CGG | - | chr8_1:81531904-81531923 | None:intergenic | 40.0% | |
! | GTCTGAGGTCTTGAATAATC+CGG | + | chr8_1:81531905-81531924 | Msa1218830:CDS | 40.0% |
TTGAAGAAGAAACGGAGACA+GGG | - | chr8_1:81531935-81531954 | None:intergenic | 40.0% | |
ATTGAAGAAGAAACGGAGAC+AGG | - | chr8_1:81531936-81531955 | None:intergenic | 40.0% | |
GAACATGAAGAAGAACCTGA+AGG | + | chr8_1:81532023-81532042 | Msa1218830:CDS | 40.0% | |
AGCAGTTACAAATGAAGACG+AGG | + | chr8_1:81532217-81532236 | Msa1218830:intron | 40.0% | |
ACTGACAACAGTGAATAACC+CGG | - | chr8_1:81532306-81532325 | None:intergenic | 40.0% | |
AACAAAACGGCAAGAACACA+TGG | - | chr8_1:81532336-81532355 | None:intergenic | 40.0% | |
GTCTTGAAAGTAACTCTTGC+TGG | - | chr8_1:81532503-81532522 | None:intergenic | 40.0% | |
AAAGAGCGATGTTGATCACT+TGG | + | chr8_1:81532523-81532542 | Msa1218830:CDS | 40.0% | |
GATGTTGATCACTTGGATGA+TGG | + | chr8_1:81532530-81532549 | Msa1218830:CDS | 40.0% | |
! | ACTTGGATGATGGTTATAGG+TGG | + | chr8_1:81532540-81532559 | Msa1218830:CDS | 40.0% |
!!! | GGCTGTTTTTGACTGGTTTT+TGG | - | chr8_1:81532577-81532596 | None:intergenic | 40.0% |
!! | TCTTGGAAACCAGAAGTATC+AGG | - | chr8_1:81533076-81533095 | None:intergenic | 40.0% |
!! | TACTTCTGGTTTCCAAGAAC+AGG | + | chr8_1:81533078-81533097 | Msa1218830:CDS | 40.0% |
TAGTTGTGTTGTGATGTTGG+TGG | - | chr8_1:81533105-81533124 | None:intergenic | 40.0% | |
CAACATCACAACACAACTAG+CGG | + | chr8_1:81533106-81533125 | Msa1218830:CDS | 40.0% | |
TCAGGATATGATTGCTCCAA+TGG | + | chr8_1:81533450-81533469 | Msa1218830:CDS | 40.0% | |
TATGATTGCTCCAATGGAGA+TGG | + | chr8_1:81533456-81533475 | Msa1218830:CDS | 40.0% | |
ATGATTGCTCCAATGGAGAT+GGG | + | chr8_1:81533457-81533476 | Msa1218830:CDS | 40.0% | |
ATGGTAAAGCAGGCGAGAAA+GGG | - | chr8_1:81531668-81531687 | None:intergenic | 45.0% | |
ATGCTGCATGATGGTAAAGC+AGG | - | chr8_1:81531678-81531697 | None:intergenic | 45.0% | |
TGAAGAAGAAACGGAGACAG+GGG | - | chr8_1:81531934-81531953 | None:intergenic | 45.0% | |
GTCTGCAACAACAGCTTCAT+TGG | - | chr8_1:81531970-81531989 | None:intergenic | 45.0% | |
TCTTCTGCTTCATCTCCTTC+AGG | - | chr8_1:81532041-81532060 | None:intergenic | 45.0% | |
ATTACTTTGAGCGGGGTTTC+CGG | + | chr8_1:81532284-81532303 | Msa1218830:intron | 45.0% | |
GGTTATAGGTGGCGCAAATA+TGG | + | chr8_1:81532551-81532570 | Msa1218830:CDS | 45.0% | |
!!! | GGAAATGGGCTGTTTTTGAC+TGG | - | chr8_1:81532584-81532603 | None:intergenic | 45.0% |
TCAAAAACAGCCCATTTCCC+AGG | + | chr8_1:81532585-81532604 | Msa1218830:CDS | 45.0% | |
! | GAAGAAGCGTATTGAGCGTT+CGG | + | chr8_1:81532958-81532977 | Msa1218830:CDS | 45.0% |
ATCGTGCTAACCAGCTATGA+AGG | + | chr8_1:81532995-81533014 | Msa1218830:CDS | 45.0% | |
! | AGTGTGTTGACCTTCATAGC+TGG | - | chr8_1:81533008-81533027 | None:intergenic | 45.0% |
TTAGCAGCACGCAATAGAAC+CGG | - | chr8_1:81533040-81533059 | None:intergenic | 45.0% | |
! | TATTGCGTGCTGCTAACCTT+GGG | + | chr8_1:81533044-81533063 | Msa1218830:CDS | 45.0% |
AAGTATCAGGCATGATCCCA+AGG | - | chr8_1:81533063-81533082 | None:intergenic | 45.0% | |
CGCTAGTTGTGTTGTGATGT+TGG | - | chr8_1:81533108-81533127 | None:intergenic | 45.0% | |
!! | AACACAACTAGCGGTGTTGT+TGG | + | chr8_1:81533115-81533134 | Msa1218830:CDS | 45.0% |
! | GAGGAACAATGGACTTCTTC+AGG | + | chr8_1:81533432-81533451 | Msa1218830:CDS | 45.0% |
ATGGTAAAGCAGGCGAGAAA+GGG | - | chr8_1:81531668-81531687 | None:intergenic | 45.0% | |
ATGCTGCATGATGGTAAAGC+AGG | - | chr8_1:81531678-81531697 | None:intergenic | 45.0% | |
TGAAGAAGAAACGGAGACAG+GGG | - | chr8_1:81531934-81531953 | None:intergenic | 45.0% | |
GTCTGCAACAACAGCTTCAT+TGG | - | chr8_1:81531970-81531989 | None:intergenic | 45.0% | |
TCTTCTGCTTCATCTCCTTC+AGG | - | chr8_1:81532041-81532060 | None:intergenic | 45.0% | |
ATTACTTTGAGCGGGGTTTC+CGG | + | chr8_1:81532284-81532303 | Msa1218830:intron | 45.0% | |
GGTTATAGGTGGCGCAAATA+TGG | + | chr8_1:81532551-81532570 | Msa1218830:CDS | 45.0% | |
!!! | GGAAATGGGCTGTTTTTGAC+TGG | - | chr8_1:81532584-81532603 | None:intergenic | 45.0% |
TCAAAAACAGCCCATTTCCC+AGG | + | chr8_1:81532585-81532604 | Msa1218830:CDS | 45.0% | |
! | GAAGAAGCGTATTGAGCGTT+CGG | + | chr8_1:81532958-81532977 | Msa1218830:CDS | 45.0% |
ATCGTGCTAACCAGCTATGA+AGG | + | chr8_1:81532995-81533014 | Msa1218830:CDS | 45.0% | |
! | AGTGTGTTGACCTTCATAGC+TGG | - | chr8_1:81533008-81533027 | None:intergenic | 45.0% |
TTAGCAGCACGCAATAGAAC+CGG | - | chr8_1:81533040-81533059 | None:intergenic | 45.0% | |
! | TATTGCGTGCTGCTAACCTT+GGG | + | chr8_1:81533044-81533063 | Msa1218830:CDS | 45.0% |
AAGTATCAGGCATGATCCCA+AGG | - | chr8_1:81533063-81533082 | None:intergenic | 45.0% | |
CGCTAGTTGTGTTGTGATGT+TGG | - | chr8_1:81533108-81533127 | None:intergenic | 45.0% | |
!! | AACACAACTAGCGGTGTTGT+TGG | + | chr8_1:81533115-81533134 | Msa1218830:CDS | 45.0% |
! | GAGGAACAATGGACTTCTTC+AGG | + | chr8_1:81533432-81533451 | Msa1218830:CDS | 45.0% |
GATGGTAAAGCAGGCGAGAA+AGG | - | chr8_1:81531669-81531688 | None:intergenic | 50.0% | |
TTACTTTGAGCGGGGTTTCC+GGG | + | chr8_1:81532285-81532304 | Msa1218830:intron | 50.0% | |
ATAGCTGGTTAGCACGATCG+AGG | - | chr8_1:81532993-81533012 | None:intergenic | 50.0% | |
TCAACACACTCACCTATCCC+CGG | + | chr8_1:81533018-81533037 | Msa1218830:CDS | 50.0% | |
TAGCAGCACGCAATAGAACC+GGG | - | chr8_1:81533039-81533058 | None:intergenic | 50.0% | |
! | CTATTGCGTGCTGCTAACCT+TGG | + | chr8_1:81533043-81533062 | Msa1218830:CDS | 50.0% |
GGGATCATGCCTGATACTTC+TGG | + | chr8_1:81533064-81533083 | Msa1218830:CDS | 50.0% | |
! | GATGTTGGTGGACCTGTTCT+TGG | - | chr8_1:81533093-81533112 | None:intergenic | 50.0% |
ATTGCTCCAATGGAGATGGG+AGG | + | chr8_1:81533460-81533479 | Msa1218830:CDS | 50.0% | |
GATGGTAAAGCAGGCGAGAA+AGG | - | chr8_1:81531669-81531688 | None:intergenic | 50.0% | |
TTACTTTGAGCGGGGTTTCC+GGG | + | chr8_1:81532285-81532304 | Msa1218830:intron | 50.0% | |
ATAGCTGGTTAGCACGATCG+AGG | - | chr8_1:81532993-81533012 | None:intergenic | 50.0% | |
TCAACACACTCACCTATCCC+CGG | + | chr8_1:81533018-81533037 | Msa1218830:CDS | 50.0% | |
TAGCAGCACGCAATAGAACC+GGG | - | chr8_1:81533039-81533058 | None:intergenic | 50.0% | |
! | CTATTGCGTGCTGCTAACCT+TGG | + | chr8_1:81533043-81533062 | Msa1218830:CDS | 50.0% |
GGGATCATGCCTGATACTTC+TGG | + | chr8_1:81533064-81533083 | Msa1218830:CDS | 50.0% | |
! | GATGTTGGTGGACCTGTTCT+TGG | - | chr8_1:81533093-81533112 | None:intergenic | 50.0% |
ATTGCTCCAATGGAGATGGG+AGG | + | chr8_1:81533460-81533479 | Msa1218830:CDS | 50.0% | |
TACCGGTAAAGGAGGCAGCT+GGG | - | chr8_1:81531871-81531890 | None:intergenic | 55.0% | |
TCCTTTACCGGTACAGTCCC+CGG | + | chr8_1:81531878-81531897 | Msa1218830:CDS | 55.0% | |
AGAAGAAACGGAGACAGGGG+TGG | - | chr8_1:81531931-81531950 | None:intergenic | 55.0% | |
CTTCTTCACCTCACAGCTCG+CGG | - | chr8_1:81532945-81532964 | None:intergenic | 55.0% | |
CACGCAATAGAACCGGGGAT+AGG | - | chr8_1:81533033-81533052 | None:intergenic | 55.0% | |
AGCAGCACGCAATAGAACCG+GGG | - | chr8_1:81533038-81533057 | None:intergenic | 55.0% | |
TACCGGTAAAGGAGGCAGCT+GGG | - | chr8_1:81531871-81531890 | None:intergenic | 55.0% | |
TCCTTTACCGGTACAGTCCC+CGG | + | chr8_1:81531878-81531897 | Msa1218830:CDS | 55.0% | |
AGAAGAAACGGAGACAGGGG+TGG | - | chr8_1:81531931-81531950 | None:intergenic | 55.0% | |
CTTCTTCACCTCACAGCTCG+CGG | - | chr8_1:81532945-81532964 | None:intergenic | 55.0% | |
CACGCAATAGAACCGGGGAT+AGG | - | chr8_1:81533033-81533052 | None:intergenic | 55.0% | |
AGCAGCACGCAATAGAACCG+GGG | - | chr8_1:81533038-81533057 | None:intergenic | 55.0% | |
!! | GTGGTGAAGGTGGTGGAAGG+TGG | - | chr8_1:81531849-81531868 | None:intergenic | 60.0% |
!! | TGGGTGGTGAAGGTGGTGGA+AGG | - | chr8_1:81531852-81531871 | None:intergenic | 60.0% |
CACCCAGCTGCCTCCTTTAC+CGG | + | chr8_1:81531866-81531885 | Msa1218830:CDS | 60.0% | |
! | GTACCGGTAAAGGAGGCAGC+TGG | - | chr8_1:81531872-81531891 | None:intergenic | 60.0% |
! | GGGGACTGTACCGGTAAAGG+AGG | - | chr8_1:81531879-81531898 | None:intergenic | 60.0% |
TTCAAGACCTCAGACGCGGC+CGG | - | chr8_1:81531900-81531919 | None:intergenic | 60.0% | |
CCAGCTCCTCCCATCTCCAT+TGG | - | chr8_1:81533469-81533488 | None:intergenic | 60.0% | |
CCAATGGAGATGGGAGGAGC+TGG | + | chr8_1:81533466-81533485 | Msa1218830:CDS | 60.0% | |
!! | GTGGTGAAGGTGGTGGAAGG+TGG | - | chr8_1:81531849-81531868 | None:intergenic | 60.0% |
!! | TGGGTGGTGAAGGTGGTGGA+AGG | - | chr8_1:81531852-81531871 | None:intergenic | 60.0% |
CACCCAGCTGCCTCCTTTAC+CGG | + | chr8_1:81531866-81531885 | Msa1218830:CDS | 60.0% | |
! | GTACCGGTAAAGGAGGCAGC+TGG | - | chr8_1:81531872-81531891 | None:intergenic | 60.0% |
! | GGGGACTGTACCGGTAAAGG+AGG | - | chr8_1:81531879-81531898 | None:intergenic | 60.0% |
TTCAAGACCTCAGACGCGGC+CGG | - | chr8_1:81531900-81531919 | None:intergenic | 60.0% | |
CCAGCTCCTCCCATCTCCAT+TGG | - | chr8_1:81533469-81533488 | None:intergenic | 60.0% | |
CCAATGGAGATGGGAGGAGC+TGG | + | chr8_1:81533466-81533485 | Msa1218830:CDS | 60.0% | |
CAGCTGGGTGGTGAAGGTGG+TGG | - | chr8_1:81531856-81531875 | None:intergenic | 65.0% | |
AGGCAGCTGGGTGGTGAAGG+TGG | - | chr8_1:81531859-81531878 | None:intergenic | 65.0% | |
AGGAGGCAGCTGGGTGGTGA+AGG | - | chr8_1:81531862-81531881 | None:intergenic | 65.0% | |
CGGTAAAGGAGGCAGCTGGG+TGG | - | chr8_1:81531868-81531887 | None:intergenic | 65.0% | |
! | GCCGGGGACTGTACCGGTAA+AGG | - | chr8_1:81531882-81531901 | None:intergenic | 65.0% |
TCAAGACCTCAGACGCGGCC+GGG | - | chr8_1:81531899-81531918 | None:intergenic | 65.0% | |
GAAACGGAGACAGGGGTGGC+CGG | - | chr8_1:81531927-81531946 | None:intergenic | 65.0% | |
CTTCACCTCACAGCTCGCGG+CGG | - | chr8_1:81532942-81532961 | None:intergenic | 65.0% | |
CAGCTGGGTGGTGAAGGTGG+TGG | - | chr8_1:81531856-81531875 | None:intergenic | 65.0% | |
AGGCAGCTGGGTGGTGAAGG+TGG | - | chr8_1:81531859-81531878 | None:intergenic | 65.0% | |
AGGAGGCAGCTGGGTGGTGA+AGG | - | chr8_1:81531862-81531881 | None:intergenic | 65.0% | |
CGGTAAAGGAGGCAGCTGGG+TGG | - | chr8_1:81531868-81531887 | None:intergenic | 65.0% | |
! | GCCGGGGACTGTACCGGTAA+AGG | - | chr8_1:81531882-81531901 | None:intergenic | 65.0% |
TCAAGACCTCAGACGCGGCC+GGG | - | chr8_1:81531899-81531918 | None:intergenic | 65.0% | |
GAAACGGAGACAGGGGTGGC+CGG | - | chr8_1:81531927-81531946 | None:intergenic | 65.0% | |
CTTCACCTCACAGCTCGCGG+CGG | - | chr8_1:81532942-81532961 | None:intergenic | 65.0% | |
CAAGACCTCAGACGCGGCCG+GGG | - | chr8_1:81531898-81531917 | None:intergenic | 70.0% | |
CACAGCTCGCGGCGGTGCAA+CGG | - | chr8_1:81532934-81532953 | None:intergenic | 70.0% | |
TTGCACCGCCGCGAGCTGTG+AGG | + | chr8_1:81532934-81532953 | Msa1218830:CDS | 70.0% | |
CAAGACCTCAGACGCGGCCG+GGG | - | chr8_1:81531898-81531917 | None:intergenic | 70.0% | |
CACAGCTCGCGGCGGTGCAA+CGG | - | chr8_1:81532934-81532953 | None:intergenic | 70.0% | |
TTGCACCGCCGCGAGCTGTG+AGG | + | chr8_1:81532934-81532953 | Msa1218830:CDS | 70.0% | |
GACGCGGCCGGGGACTGTAC+CGG | - | chr8_1:81531888-81531907 | None:intergenic | 75.0% | |
ACAGTCCCCGGCCGCGTCTG+AGG | + | chr8_1:81531890-81531909 | Msa1218830:CDS | 75.0% | |
GACGCGGCCGGGGACTGTAC+CGG | - | chr8_1:81531888-81531907 | None:intergenic | 75.0% | |
ACAGTCCCCGGCCGCGTCTG+AGG | + | chr8_1:81531890-81531909 | Msa1218830:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 81531560 | 81533501 | 81531560 | ID=Msa1218830;Name=Msa1218830 |
chr8_1 | mRNA | 81531560 | 81533501 | 81531560 | ID=Msa1218830-mRNA-1;Parent=Msa1218830;Name=Msa1218830-mRNA-1;_AED=0.01;_eAED=0.01;_QI=22|1|0.66|1|1|1|3|0|422 |
chr8_1 | exon | 81531560 | 81532126 | 81531560 | ID=Msa1218830-mRNA-1:exon:28863;Parent=Msa1218830-mRNA-1 |
chr8_1 | exon | 81532463 | 81532606 | 81532463 | ID=Msa1218830-mRNA-1:exon:28864;Parent=Msa1218830-mRNA-1 |
chr8_1 | exon | 81532922 | 81533501 | 81532922 | ID=Msa1218830-mRNA-1:exon:28865;Parent=Msa1218830-mRNA-1 |
chr8_1 | five_prime_UTR | 81531560 | 81531581 | 81531560 | ID=Msa1218830-mRNA-1:five_prime_utr;Parent=Msa1218830-mRNA-1 |
chr8_1 | CDS | 81531582 | 81532126 | 81531582 | ID=Msa1218830-mRNA-1:cds;Parent=Msa1218830-mRNA-1 |
chr8_1 | CDS | 81532463 | 81532606 | 81532463 | ID=Msa1218830-mRNA-1:cds;Parent=Msa1218830-mRNA-1 |
chr8_1 | CDS | 81532922 | 81533501 | 81532922 | ID=Msa1218830-mRNA-1:cds;Parent=Msa1218830-mRNA-1 |
Gene Sequence |
Protein sequence |