Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1332940 | sp|O22900|WRK23_ARATH | 67.925 | 106 | 34 | 0 | 180 | 285 | 144 | 249 | 1.64e-42 | 155 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1332940 | G7JNY7 | 90.071 | 423 | 34 | 4 | 1 | 422 | 5 | 420 | 0.0 | 629 |
Gene ID | Type | Classification |
---|---|---|
Msa1332940 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1218830 | Msa1332940 | 0.884425 | 1.938180e-71 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1332940 | MtrunA17_Chr4g0068541 | 90.071 | 423 | 34 | 4 | 1 | 422 | 5 | 420 | 0.0 | 629 |
Msa1332940 | MtrunA17_Chr2g0294231 | 39.663 | 416 | 163 | 15 | 8 | 410 | 26 | 366 | 8.78e-48 | 167 |
Msa1332940 | MtrunA17_Chr1g0194481 | 36.772 | 378 | 143 | 16 | 38 | 410 | 31 | 317 | 8.69e-42 | 150 |
Msa1332940 | MtrunA17_Chr7g0270191 | 47.059 | 170 | 54 | 4 | 109 | 275 | 74 | 210 | 2.90e-39 | 142 |
Msa1332940 | MtrunA17_Chr5g0418781 | 59.434 | 106 | 40 | 1 | 184 | 289 | 98 | 200 | 5.03e-36 | 133 |
Msa1332940 | MtrunA17_Chr5g0443131 | 69.231 | 78 | 24 | 0 | 197 | 274 | 144 | 221 | 8.20e-34 | 128 |
Msa1332940 | MtrunA17_Chr4g0051881 | 66.667 | 78 | 26 | 0 | 197 | 274 | 165 | 242 | 9.32e-32 | 123 |
Msa1332940 | MtrunA17_Chr8g0335811 | 62.651 | 83 | 31 | 0 | 184 | 266 | 128 | 210 | 1.45e-30 | 117 |
Msa1332940 | MtrunA17_Chr1g0150801 | 65.789 | 76 | 26 | 0 | 191 | 266 | 83 | 158 | 2.08e-29 | 112 |
Msa1332940 | MtrunA17_Chr3g0129321 | 63.514 | 74 | 27 | 0 | 197 | 270 | 105 | 178 | 4.73e-29 | 112 |
Msa1332940 | MtrunA17_Chr3g0129361 | 64.865 | 74 | 26 | 0 | 193 | 266 | 127 | 200 | 1.18e-28 | 112 |
Msa1332940 | MtrunA17_Chr7g0224801 | 65.672 | 67 | 23 | 0 | 200 | 266 | 83 | 149 | 2.68e-27 | 107 |
Msa1332940 | MtrunA17_Chr3g0106491 | 41.176 | 136 | 63 | 1 | 144 | 279 | 316 | 434 | 2.73e-27 | 113 |
Msa1332940 | MtrunA17_Chr3g0106491 | 55.738 | 61 | 26 | 1 | 210 | 270 | 198 | 257 | 5.09e-15 | 77.0 |
Msa1332940 | MtrunA17_Chr8g0383351 | 64.000 | 75 | 26 | 1 | 193 | 266 | 142 | 216 | 3.29e-27 | 108 |
Msa1332940 | MtrunA17_Chr3g0101131 | 37.427 | 171 | 97 | 3 | 145 | 305 | 341 | 511 | 9.61e-27 | 112 |
Msa1332940 | MtrunA17_Chr3g0101131 | 54.930 | 71 | 31 | 1 | 210 | 280 | 243 | 312 | 1.15e-15 | 79.0 |
Msa1332940 | MtrunA17_Chr8g0383251 | 35.057 | 174 | 107 | 3 | 112 | 280 | 6 | 178 | 1.27e-26 | 105 |
Msa1332940 | MtrunA17_Chr4g0042831 | 43.802 | 121 | 61 | 2 | 150 | 270 | 225 | 338 | 3.30e-26 | 108 |
Msa1332940 | MtrunA17_Chr4g0042831 | 55.000 | 60 | 27 | 0 | 210 | 269 | 145 | 204 | 4.24e-17 | 82.4 |
Msa1332940 | MtrunA17_Chr5g0432161 | 36.478 | 159 | 84 | 1 | 112 | 270 | 340 | 481 | 6.52e-26 | 110 |
Msa1332940 | MtrunA17_Chr5g0432161 | 53.333 | 60 | 27 | 1 | 210 | 269 | 244 | 302 | 7.45e-14 | 73.6 |
Msa1332940 | MtrunA17_Chr8g0386241 | 47.475 | 99 | 46 | 1 | 174 | 266 | 61 | 159 | 8.63e-26 | 103 |
Msa1332940 | MtrunA17_Chr7g0249311 | 38.667 | 150 | 79 | 3 | 134 | 270 | 303 | 452 | 2.84e-25 | 108 |
Msa1332940 | MtrunA17_Chr7g0249311 | 42.424 | 99 | 52 | 3 | 210 | 308 | 179 | 272 | 1.12e-16 | 82.4 |
Msa1332940 | MtrunA17_Chr7g0249301 | 55.000 | 80 | 36 | 0 | 191 | 270 | 273 | 352 | 4.51e-25 | 105 |
Msa1332940 | MtrunA17_Chr7g0249301 | 54.098 | 61 | 27 | 1 | 209 | 269 | 61 | 120 | 2.69e-15 | 77.0 |
Msa1332940 | MtrunA17_Chr7g0248721 | 45.038 | 131 | 41 | 5 | 149 | 271 | 102 | 209 | 6.61e-25 | 101 |
Msa1332940 | MtrunA17_Chr3g0079691 | 56.250 | 80 | 35 | 0 | 191 | 270 | 476 | 555 | 6.61e-25 | 107 |
Msa1332940 | MtrunA17_Chr3g0079691 | 50.725 | 69 | 33 | 1 | 210 | 278 | 280 | 347 | 5.77e-16 | 80.1 |
Msa1332940 | MtrunA17_Chr5g0445311 | 55.000 | 80 | 36 | 0 | 191 | 270 | 345 | 424 | 7.28e-25 | 107 |
Msa1332940 | MtrunA17_Chr5g0445311 | 60.000 | 60 | 23 | 1 | 210 | 269 | 200 | 258 | 1.53e-15 | 78.6 |
Msa1332940 | MtrunA17_Chr7g0218081 | 56.757 | 74 | 32 | 0 | 197 | 270 | 397 | 470 | 7.76e-25 | 106 |
Msa1332940 | MtrunA17_Chr7g0218081 | 60.000 | 60 | 23 | 1 | 210 | 269 | 228 | 286 | 8.67e-17 | 82.4 |
Msa1332940 | MtrunA17_Chr5g0418191 | 48.837 | 86 | 44 | 0 | 185 | 270 | 295 | 380 | 1.19e-24 | 105 |
Msa1332940 | MtrunA17_Chr5g0418191 | 61.667 | 60 | 22 | 1 | 210 | 269 | 151 | 209 | 1.17e-17 | 84.7 |
Msa1332940 | MtrunA17_Chr4g0004911 | 37.241 | 145 | 84 | 2 | 126 | 270 | 259 | 396 | 5.09e-24 | 103 |
Msa1332940 | MtrunA17_Chr4g0004911 | 51.471 | 68 | 32 | 1 | 210 | 276 | 184 | 251 | 2.41e-15 | 77.8 |
Msa1332940 | MtrunA17_Chr7g0243891 | 48.315 | 89 | 46 | 0 | 191 | 279 | 355 | 443 | 1.84e-23 | 102 |
Msa1332940 | MtrunA17_Chr7g0243891 | 50.746 | 67 | 32 | 1 | 210 | 276 | 216 | 281 | 4.98e-14 | 73.9 |
Msa1332940 | MtrunA17_Chr7g0263531 | 41.463 | 123 | 63 | 1 | 148 | 270 | 308 | 421 | 5.36e-23 | 100 |
Msa1332940 | MtrunA17_Chr7g0263531 | 36.975 | 119 | 52 | 3 | 211 | 327 | 190 | 287 | 6.77e-16 | 79.3 |
Msa1332940 | MtrunA17_Chr2g0322391 | 48.718 | 78 | 39 | 1 | 193 | 269 | 332 | 409 | 7.84e-22 | 97.8 |
Msa1332940 | MtrunA17_Chr4g0075201 | 38.095 | 147 | 81 | 6 | 131 | 269 | 183 | 327 | 7.92e-22 | 97.4 |
Msa1332940 | MtrunA17_Chr3g0099641 | 47.436 | 78 | 40 | 1 | 193 | 269 | 234 | 311 | 1.37e-21 | 96.7 |
Msa1332940 | MtrunA17_Chr2g0288871 | 48.718 | 78 | 39 | 1 | 193 | 269 | 288 | 365 | 5.85e-21 | 95.1 |
Msa1332940 | MtrunA17_Chr4g0060271 | 45.361 | 97 | 45 | 2 | 175 | 270 | 227 | 316 | 1.12e-20 | 94.4 |
Msa1332940 | MtrunA17_Chr2g0302391 | 32.663 | 199 | 94 | 9 | 194 | 364 | 195 | 381 | 1.19e-20 | 93.6 |
Msa1332940 | MtrunA17_Chr7g0270831 | 36.000 | 150 | 68 | 4 | 121 | 269 | 154 | 276 | 1.71e-20 | 93.2 |
Msa1332940 | MtrunA17_Chr7g0216891 | 40.984 | 122 | 56 | 5 | 150 | 266 | 166 | 276 | 2.73e-20 | 93.2 |
Msa1332940 | MtrunA17_Chr5g0447701 | 50.667 | 75 | 37 | 0 | 196 | 270 | 238 | 312 | 3.68e-20 | 91.7 |
Msa1332940 | MtrunA17_Chr5g0447701 | 52.542 | 59 | 27 | 1 | 211 | 269 | 93 | 150 | 9.17e-12 | 66.2 |
Msa1332940 | MtrunA17_Chr1g0188941 | 47.368 | 76 | 40 | 0 | 194 | 269 | 35 | 110 | 4.64e-20 | 85.1 |
Msa1332940 | MtrunA17_Chr7g0238921 | 54.795 | 73 | 32 | 1 | 197 | 268 | 110 | 182 | 5.13e-20 | 90.1 |
Msa1332940 | MtrunA17_Chr6g0485431 | 44.872 | 78 | 42 | 1 | 197 | 273 | 141 | 218 | 6.21e-20 | 90.5 |
Msa1332940 | MtrunA17_Chr4g0051181 | 48.718 | 78 | 39 | 1 | 194 | 270 | 227 | 304 | 7.82e-20 | 91.7 |
Msa1332940 | MtrunA17_Chr2g0333851 | 49.383 | 81 | 38 | 2 | 192 | 269 | 149 | 229 | 2.11e-19 | 88.6 |
Msa1332940 | MtrunA17_Chr1g0147881 | 39.583 | 96 | 57 | 1 | 186 | 280 | 238 | 333 | 2.70e-19 | 88.6 |
Msa1332940 | MtrunA17_Chr7g0270051 | 34.667 | 150 | 71 | 5 | 182 | 304 | 16 | 165 | 5.54e-19 | 86.3 |
Msa1332940 | MtrunA17_Chr1g0189391 | 48.684 | 76 | 37 | 2 | 197 | 271 | 84 | 158 | 7.64e-19 | 87.0 |
Msa1332940 | MtrunA17_Chr4g0074001 | 40.650 | 123 | 54 | 4 | 148 | 270 | 316 | 419 | 1.58e-18 | 87.8 |
Msa1332940 | MtrunA17_Chr4g0001361 | 43.820 | 89 | 47 | 3 | 184 | 269 | 134 | 222 | 2.99e-18 | 85.1 |
Msa1332940 | MtrunA17_Chr4g0025051 | 46.667 | 75 | 39 | 1 | 196 | 269 | 321 | 395 | 4.17e-18 | 86.7 |
Msa1332940 | MtrunA17_Chr4g0025061 | 46.835 | 79 | 41 | 1 | 193 | 270 | 343 | 421 | 8.74e-18 | 85.5 |
Msa1332940 | MtrunA17_Chr3g0139021 | 41.379 | 87 | 50 | 1 | 181 | 266 | 285 | 371 | 3.93e-17 | 82.8 |
Msa1332940 | MtrunA17_Chr4g0053281 | 43.373 | 83 | 43 | 2 | 188 | 266 | 241 | 323 | 5.57e-17 | 81.6 |
Msa1332940 | MtrunA17_Chr5g0401821 | 43.011 | 93 | 51 | 2 | 186 | 277 | 175 | 266 | 7.38e-17 | 80.1 |
Msa1332940 | MtrunA17_Chr3g0136961 | 48.333 | 60 | 30 | 1 | 208 | 266 | 136 | 195 | 7.82e-17 | 80.5 |
Msa1332940 | MtrunA17_Chr1g0150281 | 45.205 | 73 | 37 | 2 | 197 | 266 | 125 | 197 | 8.09e-17 | 80.5 |
Msa1332940 | MtrunA17_Chr4g0071521 | 38.462 | 91 | 55 | 1 | 186 | 275 | 221 | 311 | 2.29e-16 | 79.7 |
Msa1332940 | MtrunA17_Chr8g0379461 | 47.541 | 61 | 31 | 1 | 211 | 270 | 77 | 137 | 3.68e-16 | 77.8 |
Msa1332940 | MtrunA17_Chr7g0228941 | 49.153 | 59 | 29 | 1 | 211 | 268 | 53 | 111 | 8.37e-16 | 73.6 |
Msa1332940 | MtrunA17_Chr8g0387501 | 48.387 | 62 | 31 | 1 | 209 | 269 | 128 | 189 | 9.23e-16 | 77.0 |
Msa1332940 | MtrunA17_Chr8g0348311 | 48.333 | 60 | 30 | 1 | 211 | 269 | 156 | 215 | 1.12e-15 | 77.8 |
Msa1332940 | MtrunA17_Chr1g0150271 | 41.772 | 79 | 43 | 2 | 194 | 269 | 83 | 161 | 1.53e-15 | 76.3 |
Msa1332940 | MtrunA17_Chr2g0319961 | 37.634 | 93 | 51 | 2 | 185 | 270 | 49 | 141 | 1.53e-15 | 76.3 |
Msa1332940 | MtrunA17_Chr2g0284321 | 46.667 | 60 | 31 | 1 | 211 | 269 | 36 | 95 | 1.71e-15 | 75.1 |
Msa1332940 | MtrunA17_Chr1g0202461 | 38.372 | 86 | 50 | 2 | 185 | 269 | 238 | 321 | 6.54e-15 | 75.9 |
Msa1332940 | MtrunA17_Chr2g0289181 | 45.000 | 60 | 32 | 1 | 211 | 269 | 15 | 74 | 9.41e-15 | 73.6 |
Msa1332940 | MtrunA17_Chr2g0293481 | 45.902 | 61 | 32 | 1 | 211 | 270 | 268 | 328 | 1.30e-14 | 75.5 |
Msa1332940 | MtrunA17_Chr7g0248691 | 37.209 | 86 | 48 | 2 | 186 | 270 | 135 | 215 | 1.56e-14 | 74.3 |
Msa1332940 | MtrunA17_Chr1g0184691 | 38.750 | 80 | 48 | 1 | 188 | 266 | 271 | 350 | 2.56e-14 | 73.9 |
Msa1332940 | MtrunA17_Chr4g0024391 | 40.000 | 70 | 41 | 1 | 193 | 261 | 212 | 281 | 2.91e-13 | 71.2 |
Msa1332940 | MtrunA17_Chr5g0432071 | 48.333 | 60 | 30 | 1 | 210 | 269 | 104 | 162 | 3.38e-13 | 68.6 |
Msa1332940 | MtrunA17_Chr5g0447711 | 41.667 | 72 | 42 | 0 | 198 | 269 | 218 | 289 | 6.04e-13 | 69.3 |
Msa1332940 | MtrunA17_Chr8g0387981 | 37.234 | 94 | 55 | 2 | 175 | 265 | 98 | 190 | 1.33e-12 | 68.6 |
Msa1332940 | MtrunA17_Chr8g0347251 | 45.000 | 60 | 30 | 1 | 209 | 265 | 135 | 194 | 2.00e-12 | 68.2 |
Msa1332940 | MtrunA17_Chr3g0126391 | 48.333 | 60 | 28 | 1 | 209 | 265 | 132 | 191 | 2.30e-12 | 67.8 |
Msa1332940 | MtrunA17_Chr7g0275531 | 46.667 | 60 | 29 | 1 | 209 | 265 | 117 | 176 | 3.25e-12 | 67.4 |
Msa1332940 | MtrunA17_Chr2g0315381 | 46.667 | 60 | 29 | 1 | 209 | 265 | 143 | 202 | 4.21e-12 | 66.6 |
Msa1332940 | MtrunA17_Chr5g0419241 | 52.174 | 46 | 22 | 0 | 193 | 238 | 60 | 105 | 4.67e-12 | 62.4 |
Msa1332940 | MtrunA17_Chr2g0315361 | 38.614 | 101 | 52 | 3 | 173 | 265 | 108 | 206 | 5.99e-12 | 66.2 |
Msa1332940 | MtrunA17_Chr7g0244981 | 44.068 | 59 | 30 | 1 | 210 | 265 | 122 | 180 | 3.24e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1332940 | AT2G47260.1 | 67.925 | 106 | 34 | 0 | 180 | 285 | 144 | 249 | 1.67e-43 | 155 |
Msa1332940 | AT4G18170.1 | 48.571 | 175 | 76 | 5 | 105 | 274 | 71 | 236 | 2.34e-39 | 144 |
Msa1332940 | AT5G49520.1 | 41.202 | 233 | 92 | 6 | 180 | 410 | 191 | 380 | 8.63e-37 | 139 |
Msa1332940 | AT1G69310.4 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.91e-36 | 134 |
Msa1332940 | AT1G69310.2 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.91e-36 | 134 |
Msa1332940 | AT1G69310.1 | 70.238 | 84 | 25 | 0 | 183 | 266 | 120 | 203 | 2.91e-36 | 134 |
Msa1332940 | AT1G29860.1 | 67.073 | 82 | 27 | 0 | 194 | 275 | 120 | 201 | 1.79e-34 | 130 |
Msa1332940 | AT3G62340.1 | 65.116 | 86 | 29 | 1 | 187 | 272 | 96 | 180 | 8.14e-34 | 128 |
Msa1332940 | AT5G46350.1 | 45.139 | 144 | 75 | 1 | 132 | 275 | 109 | 248 | 3.08e-32 | 125 |
Msa1332940 | AT2G44745.1 | 62.353 | 85 | 32 | 0 | 183 | 267 | 118 | 202 | 6.56e-32 | 121 |
Msa1332940 | AT1G69310.3 | 65.476 | 84 | 25 | 1 | 183 | 266 | 120 | 199 | 1.13e-30 | 119 |
Msa1332940 | AT2G46130.1 | 56.044 | 91 | 32 | 1 | 189 | 271 | 9 | 99 | 6.74e-30 | 112 |
Msa1332940 | AT4G39410.1 | 63.529 | 85 | 30 | 1 | 183 | 266 | 195 | 279 | 3.13e-29 | 116 |
Msa1332940 | AT3G01970.1 | 63.380 | 71 | 26 | 0 | 196 | 266 | 51 | 121 | 2.19e-28 | 109 |
Msa1332940 | AT5G13080.1 | 62.857 | 70 | 26 | 0 | 197 | 266 | 54 | 123 | 8.17e-28 | 107 |
Msa1332940 | AT1G64000.1 | 54.255 | 94 | 35 | 1 | 186 | 271 | 90 | 183 | 1.25e-27 | 108 |
Msa1332940 | AT5G41570.1 | 50.476 | 105 | 47 | 2 | 173 | 276 | 64 | 164 | 6.21e-27 | 106 |
Msa1332940 | AT5G26170.1 | 60.274 | 73 | 29 | 0 | 196 | 268 | 99 | 171 | 1.57e-26 | 105 |
Msa1332940 | AT4G26640.5 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.31e-26 | 108 |
Msa1332940 | AT4G26640.5 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1332940 | AT4G26640.6 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.31e-26 | 108 |
Msa1332940 | AT4G26640.6 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1332940 | AT4G26640.4 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.31e-26 | 108 |
Msa1332940 | AT4G26640.4 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1332940 | AT4G26640.3 | 52.747 | 91 | 43 | 0 | 191 | 281 | 186 | 276 | 5.31e-26 | 108 |
Msa1332940 | AT4G26640.3 | 55.714 | 70 | 30 | 1 | 210 | 279 | 35 | 103 | 4.40e-16 | 79.7 |
Msa1332940 | AT2G21900.1 | 51.111 | 90 | 41 | 1 | 186 | 272 | 82 | 171 | 5.54e-26 | 104 |
Msa1332940 | AT5G07100.2 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.77e-26 | 104 |
Msa1332940 | AT5G07100.2 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1332940 | AT5G07100.4 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.77e-26 | 104 |
Msa1332940 | AT5G07100.4 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1332940 | AT5G07100.5 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.77e-26 | 104 |
Msa1332940 | AT5G07100.5 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1332940 | AT5G07100.3 | 48.958 | 96 | 49 | 0 | 188 | 283 | 119 | 214 | 8.77e-26 | 104 |
Msa1332940 | AT5G07100.3 | 50.000 | 60 | 30 | 0 | 210 | 269 | 24 | 83 | 7.91e-14 | 70.9 |
Msa1332940 | AT4G26640.7 | 43.089 | 123 | 63 | 1 | 159 | 281 | 297 | 412 | 1.41e-25 | 109 |
Msa1332940 | AT4G26640.7 | 55.714 | 70 | 30 | 1 | 210 | 279 | 171 | 239 | 7.65e-16 | 79.7 |
Msa1332940 | AT4G26640.1 | 52.747 | 91 | 43 | 0 | 191 | 281 | 290 | 380 | 1.48e-25 | 108 |
Msa1332940 | AT4G26640.1 | 55.714 | 70 | 30 | 1 | 210 | 279 | 139 | 207 | 7.12e-16 | 79.7 |
Msa1332940 | AT2G03340.1 | 36.686 | 169 | 79 | 3 | 130 | 298 | 353 | 493 | 1.52e-25 | 108 |
Msa1332940 | AT2G03340.1 | 60.000 | 60 | 23 | 1 | 210 | 269 | 250 | 308 | 1.15e-16 | 82.4 |
Msa1332940 | AT4G26640.2 | 43.089 | 123 | 63 | 1 | 159 | 281 | 337 | 452 | 2.14e-25 | 108 |
Msa1332940 | AT4G26640.2 | 55.714 | 70 | 30 | 1 | 210 | 279 | 211 | 279 | 8.52e-16 | 79.7 |
Msa1332940 | AT4G26440.1 | 44.444 | 108 | 60 | 0 | 171 | 278 | 333 | 440 | 2.98e-25 | 108 |
Msa1332940 | AT4G26440.1 | 52.174 | 69 | 32 | 1 | 210 | 278 | 178 | 245 | 4.80e-16 | 80.5 |
Msa1332940 | AT5G07100.1 | 42.017 | 119 | 61 | 1 | 165 | 283 | 197 | 307 | 3.02e-25 | 105 |
Msa1332940 | AT5G07100.1 | 50.000 | 60 | 30 | 0 | 210 | 269 | 117 | 176 | 1.36e-13 | 71.6 |
Msa1332940 | AT5G56270.1 | 57.500 | 80 | 34 | 0 | 191 | 270 | 468 | 547 | 3.52e-25 | 108 |
Msa1332940 | AT5G56270.1 | 50.000 | 70 | 34 | 1 | 210 | 279 | 273 | 341 | 7.11e-16 | 80.5 |
Msa1332940 | AT1G13960.2 | 58.904 | 73 | 30 | 0 | 197 | 269 | 243 | 315 | 4.39e-25 | 105 |
Msa1332940 | AT1G13960.2 | 55.224 | 67 | 29 | 1 | 210 | 276 | 76 | 141 | 7.03e-17 | 82.0 |
Msa1332940 | AT2G30250.1 | 56.471 | 85 | 37 | 0 | 191 | 275 | 309 | 393 | 8.12e-25 | 105 |
Msa1332940 | AT2G30250.1 | 44.444 | 72 | 39 | 1 | 210 | 281 | 166 | 236 | 3.17e-12 | 68.2 |
Msa1332940 | AT1G13960.1 | 58.904 | 73 | 30 | 0 | 197 | 269 | 396 | 468 | 8.96e-25 | 106 |
Msa1332940 | AT1G13960.1 | 55.224 | 67 | 29 | 1 | 210 | 276 | 229 | 294 | 9.22e-17 | 82.8 |
Msa1332940 | AT2G38470.1 | 55.000 | 80 | 36 | 0 | 191 | 270 | 343 | 422 | 1.02e-24 | 106 |
Msa1332940 | AT2G38470.1 | 53.333 | 60 | 27 | 1 | 210 | 269 | 184 | 242 | 3.13e-13 | 71.6 |
Msa1332940 | AT3G01080.2 | 33.775 | 151 | 79 | 2 | 140 | 269 | 253 | 403 | 1.43e-24 | 105 |
Msa1332940 | AT3G01080.2 | 58.333 | 60 | 24 | 1 | 210 | 269 | 205 | 263 | 2.46e-17 | 84.3 |
Msa1332940 | AT2G46130.2 | 51.648 | 91 | 32 | 2 | 189 | 271 | 9 | 95 | 1.56e-24 | 97.8 |
Msa1332940 | AT3G01080.1 | 57.534 | 73 | 31 | 0 | 197 | 269 | 293 | 365 | 4.48e-24 | 103 |
Msa1332940 | AT3G01080.1 | 58.333 | 60 | 24 | 1 | 210 | 269 | 167 | 225 | 2.74e-17 | 84.0 |
Msa1332940 | AT5G64810.1 | 52.778 | 72 | 34 | 0 | 197 | 268 | 97 | 168 | 1.03e-23 | 98.2 |
Msa1332940 | AT2G04880.2 | 54.054 | 74 | 34 | 0 | 196 | 269 | 269 | 342 | 3.53e-23 | 101 |
Msa1332940 | AT2G04880.2 | 54.839 | 62 | 27 | 1 | 209 | 270 | 110 | 170 | 3.70e-15 | 77.4 |
Msa1332940 | AT2G04880.1 | 54.054 | 74 | 34 | 0 | 196 | 269 | 293 | 366 | 4.15e-23 | 101 |
Msa1332940 | AT2G04880.1 | 54.839 | 62 | 27 | 1 | 209 | 270 | 110 | 170 | 4.22e-15 | 77.4 |
Msa1332940 | AT4G04450.2 | 48.235 | 85 | 42 | 2 | 193 | 275 | 181 | 265 | 2.28e-21 | 96.3 |
Msa1332940 | AT1G55600.1 | 53.425 | 73 | 34 | 0 | 197 | 269 | 294 | 366 | 4.53e-21 | 95.5 |
Msa1332940 | AT4G04450.1 | 48.235 | 85 | 42 | 2 | 193 | 275 | 275 | 359 | 6.41e-21 | 95.5 |
Msa1332940 | AT4G22070.4 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.86e-21 | 95.5 |
Msa1332940 | AT4G22070.3 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.86e-21 | 95.5 |
Msa1332940 | AT4G22070.2 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.86e-21 | 95.5 |
Msa1332940 | AT4G22070.1 | 50.000 | 78 | 38 | 1 | 193 | 269 | 280 | 357 | 6.86e-21 | 95.5 |
Msa1332940 | AT1G62300.1 | 50.000 | 78 | 38 | 1 | 193 | 269 | 295 | 372 | 8.53e-21 | 95.1 |
Msa1332940 | AT5G15130.2 | 48.101 | 79 | 40 | 1 | 193 | 270 | 168 | 246 | 1.49e-20 | 94.4 |
Msa1332940 | AT5G15130.1 | 48.101 | 79 | 40 | 1 | 193 | 270 | 210 | 288 | 1.76e-20 | 94.0 |
Msa1332940 | AT2G37260.3 | 40.367 | 109 | 60 | 2 | 164 | 269 | 225 | 331 | 4.02e-20 | 91.7 |
Msa1332940 | AT2G37260.3 | 50.000 | 80 | 34 | 3 | 211 | 288 | 86 | 161 | 4.39e-15 | 76.6 |
Msa1332940 | AT2G37260.2 | 40.367 | 109 | 60 | 2 | 164 | 269 | 223 | 329 | 4.04e-20 | 91.3 |
Msa1332940 | AT2G37260.2 | 50.000 | 80 | 34 | 3 | 211 | 288 | 84 | 159 | 4.36e-15 | 76.6 |
Msa1332940 | AT4G01720.1 | 50.649 | 77 | 37 | 1 | 194 | 269 | 223 | 299 | 4.55e-20 | 92.8 |
Msa1332940 | AT2G37260.1 | 40.367 | 109 | 60 | 2 | 164 | 269 | 305 | 411 | 5.48e-20 | 92.0 |
Msa1332940 | AT2G37260.1 | 50.000 | 80 | 34 | 3 | 211 | 288 | 166 | 241 | 7.18e-15 | 76.6 |
Msa1332940 | AT1G68150.1 | 48.718 | 78 | 39 | 1 | 194 | 270 | 219 | 296 | 5.76e-20 | 91.3 |
Msa1332940 | AT5G43290.1 | 51.282 | 78 | 36 | 2 | 197 | 272 | 100 | 177 | 3.44e-19 | 87.4 |
Msa1332940 | AT1G18860.1 | 46.154 | 78 | 41 | 1 | 193 | 269 | 222 | 299 | 5.02e-19 | 89.7 |
Msa1332940 | AT4G31800.2 | 53.226 | 62 | 28 | 1 | 209 | 269 | 110 | 171 | 1.82e-18 | 84.7 |
Msa1332940 | AT4G30935.1 | 37.671 | 146 | 71 | 4 | 126 | 270 | 265 | 391 | 2.00e-18 | 87.4 |
Msa1332940 | AT4G31800.1 | 53.226 | 62 | 28 | 1 | 209 | 269 | 175 | 236 | 3.60e-18 | 85.1 |
Msa1332940 | AT1G80840.1 | 45.679 | 81 | 41 | 2 | 192 | 269 | 126 | 206 | 3.82e-18 | 85.1 |
Msa1332940 | AT2G23320.1 | 47.561 | 82 | 42 | 1 | 186 | 266 | 216 | 297 | 5.74e-18 | 84.7 |
Msa1332940 | AT4G31550.2 | 45.122 | 82 | 44 | 1 | 186 | 266 | 221 | 302 | 6.73e-18 | 84.7 |
Msa1332940 | AT3G01080.3 | 58.333 | 60 | 24 | 1 | 210 | 269 | 205 | 263 | 1.12e-17 | 84.0 |
Msa1332940 | AT2G24570.1 | 45.122 | 82 | 44 | 1 | 186 | 266 | 219 | 300 | 1.37e-17 | 83.6 |
Msa1332940 | AT2G25000.2 | 51.613 | 62 | 29 | 1 | 209 | 269 | 102 | 163 | 2.58e-17 | 81.3 |
Msa1332940 | AT2G25000.4 | 51.613 | 62 | 29 | 1 | 209 | 269 | 102 | 163 | 2.58e-17 | 81.3 |
Msa1332940 | AT2G25000.3 | 51.613 | 62 | 29 | 1 | 209 | 269 | 124 | 185 | 3.83e-17 | 81.3 |
Msa1332940 | AT4G31550.1 | 43.902 | 82 | 45 | 1 | 186 | 266 | 222 | 303 | 3.90e-17 | 82.4 |
Msa1332940 | AT2G25000.1 | 51.613 | 62 | 29 | 1 | 209 | 269 | 145 | 206 | 5.80e-17 | 80.9 |
Msa1332940 | AT2G30590.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 289 | 370 | 2.27e-16 | 80.9 |
Msa1332940 | AT5G52830.1 | 41.860 | 86 | 45 | 3 | 186 | 270 | 145 | 226 | 3.64e-16 | 79.7 |
Msa1332940 | AT1G30650.1 | 40.217 | 92 | 51 | 3 | 183 | 270 | 187 | 278 | 4.86e-16 | 80.1 |
Msa1332940 | AT5G28650.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 238 | 319 | 4.96e-16 | 79.3 |
Msa1332940 | AT1G69810.2 | 34.211 | 114 | 65 | 4 | 167 | 278 | 108 | 213 | 6.14e-16 | 79.0 |
Msa1332940 | AT1G29280.1 | 43.662 | 71 | 39 | 1 | 201 | 270 | 65 | 135 | 6.49e-16 | 77.8 |
Msa1332940 | AT4G24240.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 257 | 338 | 6.69e-16 | 79.0 |
Msa1332940 | AT1G69810.1 | 34.211 | 114 | 65 | 4 | 167 | 278 | 166 | 271 | 9.46e-16 | 79.0 |
Msa1332940 | AT3G58710.2 | 40.217 | 92 | 48 | 2 | 185 | 269 | 39 | 130 | 1.05e-15 | 77.4 |
Msa1332940 | AT3G04670.1 | 41.463 | 82 | 47 | 1 | 186 | 266 | 238 | 319 | 1.56e-15 | 77.8 |
Msa1332940 | AT3G58710.1 | 32.520 | 123 | 76 | 2 | 154 | 269 | 9 | 131 | 4.95e-15 | 75.5 |
Msa1332940 | AT2G34830.2 | 38.043 | 92 | 53 | 3 | 183 | 270 | 194 | 285 | 5.88e-15 | 77.0 |
Msa1332940 | AT2G34830.1 | 38.043 | 92 | 53 | 3 | 183 | 270 | 185 | 276 | 5.88e-15 | 76.6 |
Msa1332940 | AT4G01250.1 | 36.905 | 84 | 50 | 2 | 187 | 269 | 107 | 188 | 1.25e-14 | 74.7 |
Msa1332940 | AT5G45050.2 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1130 | 1214 | 1.77e-14 | 76.3 |
Msa1332940 | AT5G45050.4 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1019 | 1103 | 1.84e-14 | 76.3 |
Msa1332940 | AT5G45050.1 | 40.449 | 89 | 48 | 2 | 184 | 271 | 1158 | 1242 | 1.84e-14 | 76.3 |
Msa1332940 | AT5G24110.1 | 37.931 | 116 | 59 | 5 | 188 | 295 | 87 | 197 | 1.54e-13 | 71.2 |
Msa1332940 | AT4G23550.1 | 41.333 | 75 | 42 | 2 | 197 | 270 | 128 | 201 | 3.05e-13 | 70.5 |
Msa1332940 | AT2G46400.1 | 36.170 | 94 | 57 | 1 | 175 | 265 | 69 | 162 | 1.99e-12 | 68.2 |
Msa1332940 | AT4G11070.2 | 38.202 | 89 | 46 | 3 | 180 | 265 | 85 | 167 | 3.74e-12 | 67.0 |
Msa1332940 | AT1G66560.1 | 45.763 | 59 | 29 | 1 | 210 | 265 | 103 | 161 | 3.90e-12 | 66.6 |
Msa1332940 | AT4G23810.1 | 37.079 | 89 | 47 | 2 | 180 | 265 | 134 | 216 | 4.40e-12 | 67.4 |
Msa1332940 | AT4G11070.1 | 38.202 | 89 | 46 | 3 | 180 | 265 | 117 | 199 | 4.95e-12 | 67.0 |
Msa1332940 | AT4G12020.6 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.77e-12 | 68.2 |
Msa1332940 | AT4G12020.6 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.08e-11 | 67.8 |
Msa1332940 | AT4G12020.8 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.77e-12 | 68.2 |
Msa1332940 | AT4G12020.8 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.08e-11 | 67.8 |
Msa1332940 | AT4G12020.3 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.83e-12 | 68.2 |
Msa1332940 | AT4G12020.3 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.11e-11 | 67.8 |
Msa1332940 | AT4G12020.7 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.84e-12 | 68.2 |
Msa1332940 | AT4G12020.7 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.19e-11 | 67.4 |
Msa1332940 | AT4G12020.1 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.91e-12 | 68.2 |
Msa1332940 | AT4G12020.1 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.19e-11 | 67.4 |
Msa1332940 | AT4G12020.9 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.91e-12 | 68.2 |
Msa1332940 | AT4G12020.9 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.19e-11 | 67.4 |
Msa1332940 | AT4G12020.10 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 6.95e-12 | 68.2 |
Msa1332940 | AT4G12020.10 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.06e-11 | 67.8 |
Msa1332940 | AT4G12020.2 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.09e-12 | 68.2 |
Msa1332940 | AT4G12020.2 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.17e-11 | 67.4 |
Msa1332940 | AT4G12020.4 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.14e-12 | 68.2 |
Msa1332940 | AT4G12020.4 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.10e-11 | 67.8 |
Msa1332940 | AT4G12020.11 | 43.678 | 87 | 37 | 3 | 148 | 230 | 583 | 661 | 7.75e-12 | 68.2 |
Msa1332940 | AT4G12020.11 | 46.774 | 62 | 32 | 1 | 208 | 269 | 466 | 526 | 1.46e-11 | 67.0 |
Msa1332940 | AT4G12020.5 | 43.678 | 87 | 37 | 3 | 148 | 230 | 516 | 594 | 7.96e-12 | 68.2 |
Msa1332940 | AT4G12020.5 | 46.774 | 62 | 32 | 1 | 208 | 269 | 399 | 459 | 1.25e-11 | 67.4 |
Msa1332940 | AT1G66600.1 | 37.500 | 88 | 50 | 2 | 183 | 265 | 74 | 161 | 1.12e-11 | 65.1 |
Msa1332940 | AT5G45260.1 | 37.500 | 96 | 53 | 3 | 179 | 269 | 1177 | 1270 | 2.27e-11 | 66.6 |
Msa1332940 | AT5G01900.1 | 34.234 | 111 | 64 | 3 | 184 | 289 | 82 | 188 | 2.69e-11 | 64.3 |
Msa1332940 | AT2G40750.1 | 37.500 | 96 | 49 | 3 | 177 | 265 | 119 | 210 | 4.15e-11 | 64.3 |
Msa1332940 | AT3G56400.1 | 32.584 | 89 | 57 | 1 | 180 | 265 | 90 | 178 | 7.79e-11 | 63.2 |
Find 99 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTTGTTCTTCTTCTTCTT+TGG | 0.208653 | 8_4:+52899792 | None:intergenic |
TTTCCCTTGTTCTTCTTGTT+TGG | 0.224161 | 8_4:+52900641 | None:intergenic |
GTTCAAAATCAAGACAATTA+TGG | 0.244462 | 8_4:-52898946 | Msa1332940:CDS |
ATGAACTCTTCAACATCTTT+TGG | 0.249819 | 8_4:-52898976 | Msa1332940:CDS |
TCAGCTTCATATTCATTCTT+TGG | 0.251845 | 8_4:+52898810 | None:intergenic |
GGGATCATGCCTGATACTTC+TGG | 0.288980 | 8_4:-52899237 | Msa1332940:CDS |
TCTTCTGCTTCATCTCCTTC+AGG | 0.297610 | 8_4:+52900224 | None:intergenic |
CAACAATCTTCTTCCTTTGC+TGG | 0.300661 | 8_4:-52900530 | Msa1332940:CDS |
GTTGTTGGTAGTTCTATTCT+TGG | 0.310119 | 8_4:-52899171 | Msa1332940:CDS |
GGTTATAGGTGGCGCAAATA+TGG | 0.310546 | 8_4:-52899711 | Msa1332940:CDS |
GTCTTGAAAGTAACTCTTGC+TGG | 0.321436 | 8_4:+52899762 | None:intergenic |
GATGTTGGTGGACCTGTTCT+TGG | 0.334569 | 8_4:+52899211 | None:intergenic |
GTCTGCAACAACAGCTTCAT+TGG | 0.352883 | 8_4:+52900295 | None:intergenic |
GTATGTATATACCTGGGAAA+TGG | 0.359230 | 8_4:+52899666 | None:intergenic |
GAGGAACAATGGACTTCTTC+AGG | 0.361888 | 8_4:-52898869 | Msa1332940:CDS |
CTTCTTCTACTTTATTCGAT+TGG | 0.383790 | 8_4:-52900469 | Msa1332940:CDS |
ATCACTTGGATGATGGTTAT+AGG | 0.391942 | 8_4:-52899725 | Msa1332940:CDS |
TACTTCTGGTTTCCAAGAAC+AGG | 0.411828 | 8_4:-52899223 | Msa1332940:CDS |
TCTTGGAAACCAGAAGTATC+AGG | 0.414512 | 8_4:+52899228 | None:intergenic |
TGTTGAAGGAGTTGTTATAA+TGG | 0.415426 | 8_4:+52899040 | None:intergenic |
GATGACAAATACTAATGATA+TGG | 0.419528 | 8_4:-52898893 | Msa1332940:CDS |
ACAACAATATCAAAGATTTC+AGG | 0.427809 | 8_4:-52899124 | Msa1332940:CDS |
TTAGCAGCACGCAATAGAAC+CGG | 0.432507 | 8_4:+52899264 | None:intergenic |
CCAGCTCCTCCCATCTCCAT+TGG | 0.441565 | 8_4:+52898835 | None:intergenic |
CTATTGCGTGCTGCTAACCT+TGG | 0.442428 | 8_4:-52899258 | Msa1332940:CDS |
TGAAGAAATTGAAGAAGAAA+CGG | 0.446413 | 8_4:+52900322 | None:intergenic |
GAAGAGAAAGATGAAGATGA+TGG | 0.447085 | 8_4:-52900206 | Msa1332940:CDS |
GCCGGGGACTGTACCGGTAA+AGG | 0.449845 | 8_4:+52900383 | None:intergenic |
TCAGGATATGATTGCTCCAA+TGG | 0.449887 | 8_4:-52898851 | Msa1332940:CDS |
AACAAGAAGAACAAGGGAAA+GGG | 0.454015 | 8_4:-52900638 | Msa1332940:CDS |
TATTGCGTGCTGCTAACCTT+GGG | 0.464715 | 8_4:-52899257 | Msa1332940:CDS |
AGGAGGCAGCTGGGTGGTGA+AGG | 0.469762 | 8_4:+52900403 | None:intergenic |
TCCTTTACCGGTACAGTCCC+CGG | 0.470396 | 8_4:-52900384 | Msa1332940:CDS |
CCAATGGAGATGGGAGGAGC+TGG | 0.477280 | 8_4:-52898835 | Msa1332940:CDS |
GAAGAAGCGTATTGAGCGTT+CGG | 0.479281 | 8_4:-52899343 | Msa1332940:CDS |
GATGGTAAAGCAGGCGAGAA+AGG | 0.479606 | 8_4:+52900596 | None:intergenic |
CAGCTGGGTGGTGAAGGTGG+TGG | 0.481535 | 8_4:+52900409 | None:intergenic |
ATTGAAGAAGAAACGGAGAC+AGG | 0.485157 | 8_4:+52900329 | None:intergenic |
TGGGTGGTGAAGGTGGTGGA+AGG | 0.485262 | 8_4:+52900413 | None:intergenic |
AACACAACTAGCGGTGTTGT+TGG | 0.487241 | 8_4:-52899186 | Msa1332940:CDS |
AGGCAGCTGGGTGGTGAAGG+TGG | 0.493908 | 8_4:+52900406 | None:intergenic |
TATGTATATACCTGGGAAAT+GGG | 0.497210 | 8_4:+52899667 | None:intergenic |
GTGGTGAAGGTGGTGGAAGG+TGG | 0.497652 | 8_4:+52900416 | None:intergenic |
CGCTAGTTGTGTTGTGATGT+TGG | 0.499668 | 8_4:+52899196 | None:intergenic |
TCAAGACCTCAGACGCGGCC+GGG | 0.504762 | 8_4:+52900366 | None:intergenic |
CAAAAGTGGAGAAATGTTGA+AGG | 0.511250 | 8_4:+52899026 | None:intergenic |
GACGCGGCCGGGGACTGTAC+CGG | 0.513396 | 8_4:+52900377 | None:intergenic |
GAAACGGAGACAGGGGTGGC+CGG | 0.514502 | 8_4:+52900338 | None:intergenic |
TTCAAGACCTCAGACGCGGC+CGG | 0.517112 | 8_4:+52900365 | None:intergenic |
TGCTGACATGTCAGTATCAA+TGG | 0.518443 | 8_4:+52900439 | None:intergenic |
TATGATTGCTCCAATGGAGA+TGG | 0.522436 | 8_4:-52898845 | Msa1332940:CDS |
GTCTGAGGTCTTGAATAATC+CGG | 0.530333 | 8_4:-52900357 | Msa1332940:CDS |
GTACCGGTAAAGGAGGCAGC+TGG | 0.531164 | 8_4:+52900393 | None:intergenic |
AAAGAGCGATGTTGATCACT+TGG | 0.537217 | 8_4:-52899739 | Msa1332940:CDS |
TAGCAGCACGCAATAGAACC+GGG | 0.537381 | 8_4:+52899265 | None:intergenic |
ATCGTGCTAACCAGCTATGA+AGG | 0.539477 | 8_4:-52899306 | Msa1332940:CDS |
TGGCTATTATATAACAAAGA+TGG | 0.540939 | 8_4:+52899060 | None:intergenic |
CAAGACCTCAGACGCGGCCG+GGG | 0.541690 | 8_4:+52900367 | None:intergenic |
ATGGTAAAGCAGGCGAGAAA+GGG | 0.542073 | 8_4:+52900597 | None:intergenic |
GATGTTGATCACTTGGATGA+TGG | 0.548334 | 8_4:-52899732 | Msa1332940:CDS |
ATGCTGCATGATGGTAAAGC+AGG | 0.549344 | 8_4:+52900587 | None:intergenic |
TTGAAGAAGAAACGGAGACA+GGG | 0.550922 | 8_4:+52900330 | None:intergenic |
AATCAAGACAATTATGGTGG+AGG | 0.551997 | 8_4:-52898940 | Msa1332940:CDS |
AGTGTGTTGACCTTCATAGC+TGG | 0.555566 | 8_4:+52899296 | None:intergenic |
CACAGCTCGCGGCAGTGCAA+CGG | 0.556769 | 8_4:+52899370 | None:intergenic |
GAGTTAACAACATTCAAAAG+TGG | 0.557077 | 8_4:+52899012 | None:intergenic |
AATGATATGGTGAGGAACAA+TGG | 0.574084 | 8_4:-52898880 | Msa1332940:CDS |
TACCGGTAAAGGAGGCAGCT+GGG | 0.581455 | 8_4:+52900394 | None:intergenic |
ATGATTGCTCCAATGGAGAT+GGG | 0.584840 | 8_4:-52898844 | Msa1332940:CDS |
AAACAAGAAGAACAAGGGAA+AGG | 0.586833 | 8_4:-52900639 | Msa1332940:CDS |
CAAATCGATGTAACCAGCAA+AGG | 0.591633 | 8_4:+52900517 | None:intergenic |
TGATCATCAGATTGTGATGG+TGG | 0.592260 | 8_4:+52900551 | None:intergenic |
AAGTATCAGGCATGATCCCA+AGG | 0.599595 | 8_4:+52899241 | None:intergenic |
GGGGACTGTACCGGTAAAGG+AGG | 0.603300 | 8_4:+52900386 | None:intergenic |
CAAAATCAAGACAATTATGG+TGG | 0.615149 | 8_4:-52898943 | Msa1332940:CDS |
CACGCAATAGAACCGGGGAT+AGG | 0.618953 | 8_4:+52899271 | None:intergenic |
GATTCCAAACAAGAAGAACA+AGG | 0.625236 | 8_4:-52900645 | Msa1332940:CDS |
TCAACACACTCACCTATCCC+CGG | 0.641094 | 8_4:-52899283 | Msa1332940:CDS |
TAGTTGTGTTGTGATGTTGG+TGG | 0.651734 | 8_4:+52899199 | None:intergenic |
ATGTCAAAGATGCTGCATGA+TGG | 0.652263 | 8_4:+52900578 | None:intergenic |
CTTCTTCACCTCACAGCTCG+CGG | 0.653855 | 8_4:+52899359 | None:intergenic |
TGTTGATCATCAGATTGTGA+TGG | 0.660250 | 8_4:+52900548 | None:intergenic |
ATTCCAAACAAGAAGAACAA+GGG | 0.661863 | 8_4:-52900644 | Msa1332940:CDS |
CAACATCACAACACAACTAG+CGG | 0.662877 | 8_4:-52899195 | Msa1332940:CDS |
ATAGCTGGTTAGCACGATCG+AGG | 0.663350 | 8_4:+52899311 | None:intergenic |
TAAGCGTTCAAGAAAGAACA+TGG | 0.664199 | 8_4:-52900699 | Msa1332940:exon |
GAACATGAAGAAGAACCTGA+AGG | 0.667636 | 8_4:-52900239 | Msa1332940:CDS |
CAAATACTAATGATATGGTG+AGG | 0.667790 | 8_4:-52898888 | Msa1332940:CDS |
GACATGTCAGTATCAATGGT+GGG | 0.669023 | 8_4:+52900443 | None:intergenic |
TGAAGAAGAAACGGAGACAG+GGG | 0.670576 | 8_4:+52900331 | None:intergenic |
TTGCACTGCCGCGAGCTGTG+AGG | 0.677407 | 8_4:-52899367 | Msa1332940:CDS |
ACTTGGATGATGGTTATAGG+TGG | 0.678436 | 8_4:-52899722 | Msa1332940:CDS |
GATCATCAGATTGTGATGGT+GGG | 0.680288 | 8_4:+52900552 | None:intergenic |
AGAAGAAACGGAGACAGGGG+TGG | 0.684451 | 8_4:+52900334 | None:intergenic |
ATTGCTCCAATGGAGATGGG+AGG | 0.700394 | 8_4:-52898841 | Msa1332940:CDS |
TGACATGTCAGTATCAATGG+TGG | 0.704204 | 8_4:+52900442 | None:intergenic |
CGGTAAAGGAGGCAGCTGGG+TGG | 0.705876 | 8_4:+52900397 | None:intergenic |
ATTATTCAAGACCTCAGACG+CGG | 0.727700 | 8_4:+52900361 | None:intergenic |
AGCAGCACGCAATAGAACCG+GGG | 0.748027 | 8_4:+52899266 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATAATCTAAAGAAA+GGG | + | chr8_4:52900008-52900027 | None:intergenic | 10.0% |
!! | TATATATATAATCTAAAGAA+AGG | + | chr8_4:52900009-52900028 | None:intergenic | 10.0% |
!! | ATATATATAATCTAAAGAAA+GGG | + | chr8_4:52900008-52900027 | None:intergenic | 10.0% |
!! | TATATATATAATCTAAAGAA+AGG | + | chr8_4:52900009-52900028 | None:intergenic | 10.0% |
!!! | AAAAAAAGTTCAATTTTAGA+GGG | + | chr8_4:52899976-52899995 | None:intergenic | 15.0% |
!!! | AAAAAAAAGTTCAATTTTAG+AGG | + | chr8_4:52899977-52899996 | None:intergenic | 15.0% |
!!! | AAAAAAAGTTCAATTTTAGA+GGG | + | chr8_4:52899976-52899995 | None:intergenic | 15.0% |
!!! | AAAAAAAAGTTCAATTTTAG+AGG | + | chr8_4:52899977-52899996 | None:intergenic | 15.0% |
!! | CTAACATACATTAAACAAAA+CGG | + | chr8_4:52899611-52899630 | None:intergenic | 20.0% |
!! | TTTGACAATAAGAAAAGTAA+TGG | - | chr8_4:52899631-52899650 | Msa1332940:intron | 20.0% |
!! | AAAAAAAAAGTGAGCTAAAT+TGG | + | chr8_4:52900084-52900103 | None:intergenic | 20.0% |
!! | CTAACATACATTAAACAAAA+CGG | + | chr8_4:52899611-52899630 | None:intergenic | 20.0% |
!! | TTTGACAATAAGAAAAGTAA+TGG | - | chr8_4:52899631-52899650 | Msa1332940:intron | 20.0% |
!! | AAAAAAAAAGTGAGCTAAAT+TGG | + | chr8_4:52900084-52900103 | None:intergenic | 20.0% |
! | TGAAGAAATTGAAGAAGAAA+CGG | + | chr8_4:52899205-52899224 | None:intergenic | 25.0% |
!! | ATTAATCTGTTTGGTGATAT+AGG | - | chr8_4:52899703-52899722 | Msa1332940:CDS | 25.0% |
!! | GTAATAGTATCTTGATTTGA+TGG | + | chr8_4:52899889-52899908 | None:intergenic | 25.0% |
! | ACAACAATATCAAAGATTTC+AGG | - | chr8_4:52900400-52900419 | Msa1332940:CDS | 25.0% |
! | TGGCTATTATATAACAAAGA+TGG | + | chr8_4:52900467-52900486 | None:intergenic | 25.0% |
! | GTTCAAAATCAAGACAATTA+TGG | - | chr8_4:52900578-52900597 | Msa1332940:CDS | 25.0% |
! | GATGACAAATACTAATGATA+TGG | - | chr8_4:52900631-52900650 | Msa1332940:CDS | 25.0% |
! | TGAAGAAATTGAAGAAGAAA+CGG | + | chr8_4:52899205-52899224 | None:intergenic | 25.0% |
!! | ATTAATCTGTTTGGTGATAT+AGG | - | chr8_4:52899703-52899722 | Msa1332940:CDS | 25.0% |
!! | GTAATAGTATCTTGATTTGA+TGG | + | chr8_4:52899889-52899908 | None:intergenic | 25.0% |
! | ACAACAATATCAAAGATTTC+AGG | - | chr8_4:52900400-52900419 | Msa1332940:CDS | 25.0% |
! | TGGCTATTATATAACAAAGA+TGG | + | chr8_4:52900467-52900486 | None:intergenic | 25.0% |
! | GTTCAAAATCAAGACAATTA+TGG | - | chr8_4:52900578-52900597 | Msa1332940:CDS | 25.0% |
! | GATGACAAATACTAATGATA+TGG | - | chr8_4:52900631-52900650 | Msa1332940:CDS | 25.0% |
ATTCCAAACAAGAAGAACAA+GGG | - | chr8_4:52898880-52898899 | Msa1332940:CDS | 30.0% | |
CTTCTTCTACTTTATTCGAT+TGG | - | chr8_4:52899055-52899074 | Msa1332940:CDS | 30.0% | |
GTGTATTCAATTACTTTGAG+CGG | - | chr8_4:52899537-52899556 | Msa1332940:intron | 30.0% | |
TGTATTCAATTACTTTGAGC+GGG | - | chr8_4:52899538-52899557 | Msa1332940:intron | 30.0% | |
CTGAAACTGATTAATCTGTT+TGG | - | chr8_4:52899694-52899713 | Msa1332940:CDS | 30.0% | |
TTCTTGTTCTTCTTCTTCTT+TGG | + | chr8_4:52899735-52899754 | None:intergenic | 30.0% | |
TATGTATATACCTGGGAAAT+GGG | + | chr8_4:52899860-52899879 | None:intergenic | 30.0% | |
GTACATGTATGTATATACCT+GGG | + | chr8_4:52899867-52899886 | None:intergenic | 30.0% | |
!! | AAAAGTTCAATTTTAGAGGG+AGG | + | chr8_4:52899973-52899992 | None:intergenic | 30.0% |
TTATCTTGTATGTGCAAAAC+AGG | - | chr8_4:52900123-52900142 | Msa1332940:intron | 30.0% | |
TGTTGAAGGAGTTGTTATAA+TGG | + | chr8_4:52900487-52900506 | None:intergenic | 30.0% | |
GAGTTAACAACATTCAAAAG+TGG | + | chr8_4:52900515-52900534 | None:intergenic | 30.0% | |
! | ATGAACTCTTCAACATCTTT+TGG | - | chr8_4:52900548-52900567 | Msa1332940:CDS | 30.0% |
CAAAATCAAGACAATTATGG+TGG | - | chr8_4:52900581-52900600 | Msa1332940:CDS | 30.0% | |
CAAATACTAATGATATGGTG+AGG | - | chr8_4:52900636-52900655 | Msa1332940:CDS | 30.0% | |
ATTCCAAACAAGAAGAACAA+GGG | - | chr8_4:52898880-52898899 | Msa1332940:CDS | 30.0% | |
CTTCTTCTACTTTATTCGAT+TGG | - | chr8_4:52899055-52899074 | Msa1332940:CDS | 30.0% | |
GTGTATTCAATTACTTTGAG+CGG | - | chr8_4:52899537-52899556 | Msa1332940:intron | 30.0% | |
TGTATTCAATTACTTTGAGC+GGG | - | chr8_4:52899538-52899557 | Msa1332940:intron | 30.0% | |
CTGAAACTGATTAATCTGTT+TGG | - | chr8_4:52899694-52899713 | Msa1332940:CDS | 30.0% | |
TTCTTGTTCTTCTTCTTCTT+TGG | + | chr8_4:52899735-52899754 | None:intergenic | 30.0% | |
TATGTATATACCTGGGAAAT+GGG | + | chr8_4:52899860-52899879 | None:intergenic | 30.0% | |
GTACATGTATGTATATACCT+GGG | + | chr8_4:52899867-52899886 | None:intergenic | 30.0% | |
!! | AAAAGTTCAATTTTAGAGGG+AGG | + | chr8_4:52899973-52899992 | None:intergenic | 30.0% |
TTATCTTGTATGTGCAAAAC+AGG | - | chr8_4:52900123-52900142 | Msa1332940:intron | 30.0% | |
TGTTGAAGGAGTTGTTATAA+TGG | + | chr8_4:52900487-52900506 | None:intergenic | 30.0% | |
GAGTTAACAACATTCAAAAG+TGG | + | chr8_4:52900515-52900534 | None:intergenic | 30.0% | |
! | ATGAACTCTTCAACATCTTT+TGG | - | chr8_4:52900548-52900567 | Msa1332940:CDS | 30.0% |
CAAAATCAAGACAATTATGG+TGG | - | chr8_4:52900581-52900600 | Msa1332940:CDS | 30.0% | |
CAAATACTAATGATATGGTG+AGG | - | chr8_4:52900636-52900655 | Msa1332940:CDS | 30.0% | |
TAAGCGTTCAAGAAAGAACA+TGG | - | chr8_4:52898825-52898844 | Msa1332940:CDS | 35.0% | |
! | TCTTCAACAACAGCATTTTC+AGG | - | chr8_4:52898853-52898872 | Msa1332940:CDS | 35.0% |
GATTCCAAACAAGAAGAACA+AGG | - | chr8_4:52898879-52898898 | Msa1332940:CDS | 35.0% | |
TTTCCCTTGTTCTTCTTGTT+TGG | + | chr8_4:52898886-52898905 | None:intergenic | 35.0% | |
AAACAAGAAGAACAAGGGAA+AGG | - | chr8_4:52898885-52898904 | Msa1332940:CDS | 35.0% | |
AACAAGAAGAACAAGGGAAA+GGG | - | chr8_4:52898886-52898905 | Msa1332940:CDS | 35.0% | |
TGTTGATCATCAGATTGTGA+TGG | + | chr8_4:52898979-52898998 | None:intergenic | 35.0% | |
GAAGAGAAAGATGAAGATGA+TGG | - | chr8_4:52899318-52899337 | Msa1332940:CDS | 35.0% | |
GTATTCAATTACTTTGAGCG+GGG | - | chr8_4:52899539-52899558 | Msa1332940:intron | 35.0% | |
! | ATCACTTGGATGATGGTTAT+AGG | - | chr8_4:52899799-52899818 | Msa1332940:CDS | 35.0% |
GTATGTATATACCTGGGAAA+TGG | + | chr8_4:52899861-52899880 | None:intergenic | 35.0% | |
GGTACATGTATGTATATACC+TGG | + | chr8_4:52899868-52899887 | None:intergenic | 35.0% | |
! | ACTTTTGCACTCAGATCTAA+AGG | + | chr8_4:52899916-52899935 | None:intergenic | 35.0% |
!! | GTTGTTGGTAGTTCTATTCT+TGG | - | chr8_4:52900353-52900372 | Msa1332940:CDS | 35.0% |
CAAAAGTGGAGAAATGTTGA+AGG | + | chr8_4:52900501-52900520 | None:intergenic | 35.0% | |
! | AACTCTTCAACATCTTTTGG+TGG | - | chr8_4:52900551-52900570 | Msa1332940:CDS | 35.0% |
AATCAAGACAATTATGGTGG+AGG | - | chr8_4:52900584-52900603 | Msa1332940:CDS | 35.0% | |
AATGATATGGTGAGGAACAA+TGG | - | chr8_4:52900644-52900663 | Msa1332940:CDS | 35.0% | |
TAAGCGTTCAAGAAAGAACA+TGG | - | chr8_4:52898825-52898844 | Msa1332940:CDS | 35.0% | |
! | TCTTCAACAACAGCATTTTC+AGG | - | chr8_4:52898853-52898872 | Msa1332940:CDS | 35.0% |
GATTCCAAACAAGAAGAACA+AGG | - | chr8_4:52898879-52898898 | Msa1332940:CDS | 35.0% | |
TTTCCCTTGTTCTTCTTGTT+TGG | + | chr8_4:52898886-52898905 | None:intergenic | 35.0% | |
AAACAAGAAGAACAAGGGAA+AGG | - | chr8_4:52898885-52898904 | Msa1332940:CDS | 35.0% | |
AACAAGAAGAACAAGGGAAA+GGG | - | chr8_4:52898886-52898905 | Msa1332940:CDS | 35.0% | |
TGTTGATCATCAGATTGTGA+TGG | + | chr8_4:52898979-52898998 | None:intergenic | 35.0% | |
GAAGAGAAAGATGAAGATGA+TGG | - | chr8_4:52899318-52899337 | Msa1332940:CDS | 35.0% | |
GTATTCAATTACTTTGAGCG+GGG | - | chr8_4:52899539-52899558 | Msa1332940:intron | 35.0% | |
! | ATCACTTGGATGATGGTTAT+AGG | - | chr8_4:52899799-52899818 | Msa1332940:CDS | 35.0% |
GTATGTATATACCTGGGAAA+TGG | + | chr8_4:52899861-52899880 | None:intergenic | 35.0% | |
GGTACATGTATGTATATACC+TGG | + | chr8_4:52899868-52899887 | None:intergenic | 35.0% | |
! | ACTTTTGCACTCAGATCTAA+AGG | + | chr8_4:52899916-52899935 | None:intergenic | 35.0% |
!! | GTTGTTGGTAGTTCTATTCT+TGG | - | chr8_4:52900353-52900372 | Msa1332940:CDS | 35.0% |
CAAAAGTGGAGAAATGTTGA+AGG | + | chr8_4:52900501-52900520 | None:intergenic | 35.0% | |
! | AACTCTTCAACATCTTTTGG+TGG | - | chr8_4:52900551-52900570 | Msa1332940:CDS | 35.0% |
AATCAAGACAATTATGGTGG+AGG | - | chr8_4:52900584-52900603 | Msa1332940:CDS | 35.0% | |
AATGATATGGTGAGGAACAA+TGG | - | chr8_4:52900644-52900663 | Msa1332940:CDS | 35.0% | |
ATGTCAAAGATGCTGCATGA+TGG | + | chr8_4:52898949-52898968 | None:intergenic | 40.0% | |
GATCATCAGATTGTGATGGT+GGG | + | chr8_4:52898975-52898994 | None:intergenic | 40.0% | |
TGATCATCAGATTGTGATGG+TGG | + | chr8_4:52898976-52898995 | None:intergenic | 40.0% | |
CAACAATCTTCTTCCTTTGC+TGG | - | chr8_4:52898994-52899013 | Msa1332940:CDS | 40.0% | |
CAAATCGATGTAACCAGCAA+AGG | + | chr8_4:52899010-52899029 | None:intergenic | 40.0% | |
GACATGTCAGTATCAATGGT+GGG | + | chr8_4:52899084-52899103 | None:intergenic | 40.0% | |
TGACATGTCAGTATCAATGG+TGG | + | chr8_4:52899085-52899104 | None:intergenic | 40.0% | |
TGCTGACATGTCAGTATCAA+TGG | + | chr8_4:52899088-52899107 | None:intergenic | 40.0% | |
ATTATTCAAGACCTCAGACG+CGG | + | chr8_4:52899166-52899185 | None:intergenic | 40.0% | |
! | GTCTGAGGTCTTGAATAATC+CGG | - | chr8_4:52899167-52899186 | Msa1332940:CDS | 40.0% |
TTGAAGAAGAAACGGAGACA+GGG | + | chr8_4:52899197-52899216 | None:intergenic | 40.0% | |
ATTGAAGAAGAAACGGAGAC+AGG | + | chr8_4:52899198-52899217 | None:intergenic | 40.0% | |
GAACATGAAGAAGAACCTGA+AGG | - | chr8_4:52899285-52899304 | Msa1332940:CDS | 40.0% | |
AGCAGTTACAAATGAAGACG+AGG | - | chr8_4:52899479-52899498 | Msa1332940:intron | 40.0% | |
ACTGACAACAGTGAATAACC+CGG | + | chr8_4:52899568-52899587 | None:intergenic | 40.0% | |
AACAAAACGGCAAGAACACA+TGG | + | chr8_4:52899598-52899617 | None:intergenic | 40.0% | |
GTCTTGAAAGTAACTCTTGC+TGG | + | chr8_4:52899765-52899784 | None:intergenic | 40.0% | |
AAAGAGCGATGTTGATCACT+TGG | - | chr8_4:52899785-52899804 | Msa1332940:CDS | 40.0% | |
GATGTTGATCACTTGGATGA+TGG | - | chr8_4:52899792-52899811 | Msa1332940:CDS | 40.0% | |
! | ACTTGGATGATGGTTATAGG+TGG | - | chr8_4:52899802-52899821 | Msa1332940:CDS | 40.0% |
!!! | GGCTGTTTTTGACTGGTTTT+TGG | + | chr8_4:52899839-52899858 | None:intergenic | 40.0% |
!! | TCTTGGAAACCAGAAGTATC+AGG | + | chr8_4:52900299-52900318 | None:intergenic | 40.0% |
!! | TACTTCTGGTTTCCAAGAAC+AGG | - | chr8_4:52900301-52900320 | Msa1332940:CDS | 40.0% |
TAGTTGTGTTGTGATGTTGG+TGG | + | chr8_4:52900328-52900347 | None:intergenic | 40.0% | |
CAACATCACAACACAACTAG+CGG | - | chr8_4:52900329-52900348 | Msa1332940:CDS | 40.0% | |
TCAGGATATGATTGCTCCAA+TGG | - | chr8_4:52900673-52900692 | Msa1332940:CDS | 40.0% | |
TATGATTGCTCCAATGGAGA+TGG | - | chr8_4:52900679-52900698 | Msa1332940:CDS | 40.0% | |
ATGATTGCTCCAATGGAGAT+GGG | - | chr8_4:52900680-52900699 | Msa1332940:CDS | 40.0% | |
ATGTCAAAGATGCTGCATGA+TGG | + | chr8_4:52898949-52898968 | None:intergenic | 40.0% | |
GATCATCAGATTGTGATGGT+GGG | + | chr8_4:52898975-52898994 | None:intergenic | 40.0% | |
TGATCATCAGATTGTGATGG+TGG | + | chr8_4:52898976-52898995 | None:intergenic | 40.0% | |
CAACAATCTTCTTCCTTTGC+TGG | - | chr8_4:52898994-52899013 | Msa1332940:CDS | 40.0% | |
CAAATCGATGTAACCAGCAA+AGG | + | chr8_4:52899010-52899029 | None:intergenic | 40.0% | |
GACATGTCAGTATCAATGGT+GGG | + | chr8_4:52899084-52899103 | None:intergenic | 40.0% | |
TGACATGTCAGTATCAATGG+TGG | + | chr8_4:52899085-52899104 | None:intergenic | 40.0% | |
TGCTGACATGTCAGTATCAA+TGG | + | chr8_4:52899088-52899107 | None:intergenic | 40.0% | |
ATTATTCAAGACCTCAGACG+CGG | + | chr8_4:52899166-52899185 | None:intergenic | 40.0% | |
! | GTCTGAGGTCTTGAATAATC+CGG | - | chr8_4:52899167-52899186 | Msa1332940:CDS | 40.0% |
TTGAAGAAGAAACGGAGACA+GGG | + | chr8_4:52899197-52899216 | None:intergenic | 40.0% | |
ATTGAAGAAGAAACGGAGAC+AGG | + | chr8_4:52899198-52899217 | None:intergenic | 40.0% | |
GAACATGAAGAAGAACCTGA+AGG | - | chr8_4:52899285-52899304 | Msa1332940:CDS | 40.0% | |
AGCAGTTACAAATGAAGACG+AGG | - | chr8_4:52899479-52899498 | Msa1332940:intron | 40.0% | |
ACTGACAACAGTGAATAACC+CGG | + | chr8_4:52899568-52899587 | None:intergenic | 40.0% | |
AACAAAACGGCAAGAACACA+TGG | + | chr8_4:52899598-52899617 | None:intergenic | 40.0% | |
GTCTTGAAAGTAACTCTTGC+TGG | + | chr8_4:52899765-52899784 | None:intergenic | 40.0% | |
AAAGAGCGATGTTGATCACT+TGG | - | chr8_4:52899785-52899804 | Msa1332940:CDS | 40.0% | |
GATGTTGATCACTTGGATGA+TGG | - | chr8_4:52899792-52899811 | Msa1332940:CDS | 40.0% | |
! | ACTTGGATGATGGTTATAGG+TGG | - | chr8_4:52899802-52899821 | Msa1332940:CDS | 40.0% |
!!! | GGCTGTTTTTGACTGGTTTT+TGG | + | chr8_4:52899839-52899858 | None:intergenic | 40.0% |
!! | TCTTGGAAACCAGAAGTATC+AGG | + | chr8_4:52900299-52900318 | None:intergenic | 40.0% |
!! | TACTTCTGGTTTCCAAGAAC+AGG | - | chr8_4:52900301-52900320 | Msa1332940:CDS | 40.0% |
TAGTTGTGTTGTGATGTTGG+TGG | + | chr8_4:52900328-52900347 | None:intergenic | 40.0% | |
CAACATCACAACACAACTAG+CGG | - | chr8_4:52900329-52900348 | Msa1332940:CDS | 40.0% | |
TCAGGATATGATTGCTCCAA+TGG | - | chr8_4:52900673-52900692 | Msa1332940:CDS | 40.0% | |
TATGATTGCTCCAATGGAGA+TGG | - | chr8_4:52900679-52900698 | Msa1332940:CDS | 40.0% | |
ATGATTGCTCCAATGGAGAT+GGG | - | chr8_4:52900680-52900699 | Msa1332940:CDS | 40.0% | |
ATGGTAAAGCAGGCGAGAAA+GGG | + | chr8_4:52898930-52898949 | None:intergenic | 45.0% | |
ATGCTGCATGATGGTAAAGC+AGG | + | chr8_4:52898940-52898959 | None:intergenic | 45.0% | |
TGAAGAAGAAACGGAGACAG+GGG | + | chr8_4:52899196-52899215 | None:intergenic | 45.0% | |
GTCTGCAACAACAGCTTCAT+TGG | + | chr8_4:52899232-52899251 | None:intergenic | 45.0% | |
TCTTCTGCTTCATCTCCTTC+AGG | + | chr8_4:52899303-52899322 | None:intergenic | 45.0% | |
ATTACTTTGAGCGGGGTTTC+CGG | - | chr8_4:52899546-52899565 | Msa1332940:intron | 45.0% | |
GGTTATAGGTGGCGCAAATA+TGG | - | chr8_4:52899813-52899832 | Msa1332940:intron | 45.0% | |
!!! | GGAAATGGGCTGTTTTTGAC+TGG | + | chr8_4:52899846-52899865 | None:intergenic | 45.0% |
TCAAAAACAGCCCATTTCCC+AGG | - | chr8_4:52899847-52899866 | Msa1332940:intron | 45.0% | |
! | GAAGAAGCGTATTGAGCGTT+CGG | - | chr8_4:52900181-52900200 | Msa1332940:CDS | 45.0% |
ATCGTGCTAACCAGCTATGA+AGG | - | chr8_4:52900218-52900237 | Msa1332940:CDS | 45.0% | |
! | AGTGTGTTGACCTTCATAGC+TGG | + | chr8_4:52900231-52900250 | None:intergenic | 45.0% |
TTAGCAGCACGCAATAGAAC+CGG | + | chr8_4:52900263-52900282 | None:intergenic | 45.0% | |
! | TATTGCGTGCTGCTAACCTT+GGG | - | chr8_4:52900267-52900286 | Msa1332940:CDS | 45.0% |
AAGTATCAGGCATGATCCCA+AGG | + | chr8_4:52900286-52900305 | None:intergenic | 45.0% | |
CGCTAGTTGTGTTGTGATGT+TGG | + | chr8_4:52900331-52900350 | None:intergenic | 45.0% | |
!! | AACACAACTAGCGGTGTTGT+TGG | - | chr8_4:52900338-52900357 | Msa1332940:CDS | 45.0% |
! | GAGGAACAATGGACTTCTTC+AGG | - | chr8_4:52900655-52900674 | Msa1332940:CDS | 45.0% |
ATGGTAAAGCAGGCGAGAAA+GGG | + | chr8_4:52898930-52898949 | None:intergenic | 45.0% | |
ATGCTGCATGATGGTAAAGC+AGG | + | chr8_4:52898940-52898959 | None:intergenic | 45.0% | |
TGAAGAAGAAACGGAGACAG+GGG | + | chr8_4:52899196-52899215 | None:intergenic | 45.0% | |
GTCTGCAACAACAGCTTCAT+TGG | + | chr8_4:52899232-52899251 | None:intergenic | 45.0% | |
TCTTCTGCTTCATCTCCTTC+AGG | + | chr8_4:52899303-52899322 | None:intergenic | 45.0% | |
ATTACTTTGAGCGGGGTTTC+CGG | - | chr8_4:52899546-52899565 | Msa1332940:intron | 45.0% | |
GGTTATAGGTGGCGCAAATA+TGG | - | chr8_4:52899813-52899832 | Msa1332940:intron | 45.0% | |
!!! | GGAAATGGGCTGTTTTTGAC+TGG | + | chr8_4:52899846-52899865 | None:intergenic | 45.0% |
TCAAAAACAGCCCATTTCCC+AGG | - | chr8_4:52899847-52899866 | Msa1332940:intron | 45.0% | |
! | GAAGAAGCGTATTGAGCGTT+CGG | - | chr8_4:52900181-52900200 | Msa1332940:CDS | 45.0% |
ATCGTGCTAACCAGCTATGA+AGG | - | chr8_4:52900218-52900237 | Msa1332940:CDS | 45.0% | |
! | AGTGTGTTGACCTTCATAGC+TGG | + | chr8_4:52900231-52900250 | None:intergenic | 45.0% |
TTAGCAGCACGCAATAGAAC+CGG | + | chr8_4:52900263-52900282 | None:intergenic | 45.0% | |
! | TATTGCGTGCTGCTAACCTT+GGG | - | chr8_4:52900267-52900286 | Msa1332940:CDS | 45.0% |
AAGTATCAGGCATGATCCCA+AGG | + | chr8_4:52900286-52900305 | None:intergenic | 45.0% | |
CGCTAGTTGTGTTGTGATGT+TGG | + | chr8_4:52900331-52900350 | None:intergenic | 45.0% | |
!! | AACACAACTAGCGGTGTTGT+TGG | - | chr8_4:52900338-52900357 | Msa1332940:CDS | 45.0% |
! | GAGGAACAATGGACTTCTTC+AGG | - | chr8_4:52900655-52900674 | Msa1332940:CDS | 45.0% |
GATGGTAAAGCAGGCGAGAA+AGG | + | chr8_4:52898931-52898950 | None:intergenic | 50.0% | |
TTACTTTGAGCGGGGTTTCC+GGG | - | chr8_4:52899547-52899566 | Msa1332940:intron | 50.0% | |
ATAGCTGGTTAGCACGATCG+AGG | + | chr8_4:52900216-52900235 | None:intergenic | 50.0% | |
TCAACACACTCACCTATCCC+CGG | - | chr8_4:52900241-52900260 | Msa1332940:CDS | 50.0% | |
TAGCAGCACGCAATAGAACC+GGG | + | chr8_4:52900262-52900281 | None:intergenic | 50.0% | |
! | CTATTGCGTGCTGCTAACCT+TGG | - | chr8_4:52900266-52900285 | Msa1332940:CDS | 50.0% |
GGGATCATGCCTGATACTTC+TGG | - | chr8_4:52900287-52900306 | Msa1332940:CDS | 50.0% | |
! | GATGTTGGTGGACCTGTTCT+TGG | + | chr8_4:52900316-52900335 | None:intergenic | 50.0% |
ATTGCTCCAATGGAGATGGG+AGG | - | chr8_4:52900683-52900702 | Msa1332940:CDS | 50.0% | |
GATGGTAAAGCAGGCGAGAA+AGG | + | chr8_4:52898931-52898950 | None:intergenic | 50.0% | |
TTACTTTGAGCGGGGTTTCC+GGG | - | chr8_4:52899547-52899566 | Msa1332940:intron | 50.0% | |
ATAGCTGGTTAGCACGATCG+AGG | + | chr8_4:52900216-52900235 | None:intergenic | 50.0% | |
TCAACACACTCACCTATCCC+CGG | - | chr8_4:52900241-52900260 | Msa1332940:CDS | 50.0% | |
TAGCAGCACGCAATAGAACC+GGG | + | chr8_4:52900262-52900281 | None:intergenic | 50.0% | |
! | CTATTGCGTGCTGCTAACCT+TGG | - | chr8_4:52900266-52900285 | Msa1332940:CDS | 50.0% |
GGGATCATGCCTGATACTTC+TGG | - | chr8_4:52900287-52900306 | Msa1332940:CDS | 50.0% | |
! | GATGTTGGTGGACCTGTTCT+TGG | + | chr8_4:52900316-52900335 | None:intergenic | 50.0% |
ATTGCTCCAATGGAGATGGG+AGG | - | chr8_4:52900683-52900702 | Msa1332940:CDS | 50.0% | |
TACCGGTAAAGGAGGCAGCT+GGG | + | chr8_4:52899133-52899152 | None:intergenic | 55.0% | |
TCCTTTACCGGTACAGTCCC+CGG | - | chr8_4:52899140-52899159 | Msa1332940:CDS | 55.0% | |
AGAAGAAACGGAGACAGGGG+TGG | + | chr8_4:52899193-52899212 | None:intergenic | 55.0% | |
CTTCTTCACCTCACAGCTCG+CGG | + | chr8_4:52900168-52900187 | None:intergenic | 55.0% | |
CACGCAATAGAACCGGGGAT+AGG | + | chr8_4:52900256-52900275 | None:intergenic | 55.0% | |
AGCAGCACGCAATAGAACCG+GGG | + | chr8_4:52900261-52900280 | None:intergenic | 55.0% | |
TACCGGTAAAGGAGGCAGCT+GGG | + | chr8_4:52899133-52899152 | None:intergenic | 55.0% | |
TCCTTTACCGGTACAGTCCC+CGG | - | chr8_4:52899140-52899159 | Msa1332940:CDS | 55.0% | |
AGAAGAAACGGAGACAGGGG+TGG | + | chr8_4:52899193-52899212 | None:intergenic | 55.0% | |
CTTCTTCACCTCACAGCTCG+CGG | + | chr8_4:52900168-52900187 | None:intergenic | 55.0% | |
CACGCAATAGAACCGGGGAT+AGG | + | chr8_4:52900256-52900275 | None:intergenic | 55.0% | |
AGCAGCACGCAATAGAACCG+GGG | + | chr8_4:52900261-52900280 | None:intergenic | 55.0% | |
!! | GTGGTGAAGGTGGTGGAAGG+TGG | + | chr8_4:52899111-52899130 | None:intergenic | 60.0% |
!! | TGGGTGGTGAAGGTGGTGGA+AGG | + | chr8_4:52899114-52899133 | None:intergenic | 60.0% |
CACCCAGCTGCCTCCTTTAC+CGG | - | chr8_4:52899128-52899147 | Msa1332940:CDS | 60.0% | |
! | GTACCGGTAAAGGAGGCAGC+TGG | + | chr8_4:52899134-52899153 | None:intergenic | 60.0% |
! | GGGGACTGTACCGGTAAAGG+AGG | + | chr8_4:52899141-52899160 | None:intergenic | 60.0% |
TTCAAGACCTCAGACGCGGC+CGG | + | chr8_4:52899162-52899181 | None:intergenic | 60.0% | |
CCAGCTCCTCCCATCTCCAT+TGG | + | chr8_4:52900692-52900711 | None:intergenic | 60.0% | |
CCAATGGAGATGGGAGGAGC+TGG | - | chr8_4:52900689-52900708 | Msa1332940:exon | 60.0% | |
!! | GTGGTGAAGGTGGTGGAAGG+TGG | + | chr8_4:52899111-52899130 | None:intergenic | 60.0% |
!! | TGGGTGGTGAAGGTGGTGGA+AGG | + | chr8_4:52899114-52899133 | None:intergenic | 60.0% |
CACCCAGCTGCCTCCTTTAC+CGG | - | chr8_4:52899128-52899147 | Msa1332940:CDS | 60.0% | |
! | GTACCGGTAAAGGAGGCAGC+TGG | + | chr8_4:52899134-52899153 | None:intergenic | 60.0% |
! | GGGGACTGTACCGGTAAAGG+AGG | + | chr8_4:52899141-52899160 | None:intergenic | 60.0% |
TTCAAGACCTCAGACGCGGC+CGG | + | chr8_4:52899162-52899181 | None:intergenic | 60.0% | |
CCAGCTCCTCCCATCTCCAT+TGG | + | chr8_4:52900692-52900711 | None:intergenic | 60.0% | |
CCAATGGAGATGGGAGGAGC+TGG | - | chr8_4:52900689-52900708 | Msa1332940:exon | 60.0% | |
CAGCTGGGTGGTGAAGGTGG+TGG | + | chr8_4:52899118-52899137 | None:intergenic | 65.0% | |
AGGCAGCTGGGTGGTGAAGG+TGG | + | chr8_4:52899121-52899140 | None:intergenic | 65.0% | |
AGGAGGCAGCTGGGTGGTGA+AGG | + | chr8_4:52899124-52899143 | None:intergenic | 65.0% | |
CGGTAAAGGAGGCAGCTGGG+TGG | + | chr8_4:52899130-52899149 | None:intergenic | 65.0% | |
! | GCCGGGGACTGTACCGGTAA+AGG | + | chr8_4:52899144-52899163 | None:intergenic | 65.0% |
TCAAGACCTCAGACGCGGCC+GGG | + | chr8_4:52899161-52899180 | None:intergenic | 65.0% | |
GAAACGGAGACAGGGGTGGC+CGG | + | chr8_4:52899189-52899208 | None:intergenic | 65.0% | |
CACAGCTCGCGGCAGTGCAA+CGG | + | chr8_4:52900157-52900176 | None:intergenic | 65.0% | |
TTGCACTGCCGCGAGCTGTG+AGG | - | chr8_4:52900157-52900176 | Msa1332940:intron | 65.0% | |
CAGCTGGGTGGTGAAGGTGG+TGG | + | chr8_4:52899118-52899137 | None:intergenic | 65.0% | |
AGGCAGCTGGGTGGTGAAGG+TGG | + | chr8_4:52899121-52899140 | None:intergenic | 65.0% | |
AGGAGGCAGCTGGGTGGTGA+AGG | + | chr8_4:52899124-52899143 | None:intergenic | 65.0% | |
CGGTAAAGGAGGCAGCTGGG+TGG | + | chr8_4:52899130-52899149 | None:intergenic | 65.0% | |
! | GCCGGGGACTGTACCGGTAA+AGG | + | chr8_4:52899144-52899163 | None:intergenic | 65.0% |
TCAAGACCTCAGACGCGGCC+GGG | + | chr8_4:52899161-52899180 | None:intergenic | 65.0% | |
GAAACGGAGACAGGGGTGGC+CGG | + | chr8_4:52899189-52899208 | None:intergenic | 65.0% | |
CACAGCTCGCGGCAGTGCAA+CGG | + | chr8_4:52900157-52900176 | None:intergenic | 65.0% | |
TTGCACTGCCGCGAGCTGTG+AGG | - | chr8_4:52900157-52900176 | Msa1332940:intron | 65.0% | |
CAAGACCTCAGACGCGGCCG+GGG | + | chr8_4:52899160-52899179 | None:intergenic | 70.0% | |
CAAGACCTCAGACGCGGCCG+GGG | + | chr8_4:52899160-52899179 | None:intergenic | 70.0% | |
GACGCGGCCGGGGACTGTAC+CGG | + | chr8_4:52899150-52899169 | None:intergenic | 75.0% | |
ACAGTCCCCGGCCGCGTCTG+AGG | - | chr8_4:52899152-52899171 | Msa1332940:CDS | 75.0% | |
GACGCGGCCGGGGACTGTAC+CGG | + | chr8_4:52899150-52899169 | None:intergenic | 75.0% | |
ACAGTCCCCGGCCGCGTCTG+AGG | - | chr8_4:52899152-52899171 | Msa1332940:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 52898822 | 52900724 | 52898822 | ID=Msa1332940;Name=Msa1332940 |
chr8_4 | mRNA | 52898822 | 52900724 | 52898822 | ID=Msa1332940-mRNA-1;Parent=Msa1332940;Name=Msa1332940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=22|1|0.66|1|1|1|3|0|422 |
chr8_4 | exon | 52898822 | 52899401 | 52898822 | ID=Msa1332940-mRNA-1:exon:16068;Parent=Msa1332940-mRNA-1 |
chr8_4 | exon | 52899678 | 52899821 | 52899678 | ID=Msa1332940-mRNA-1:exon:16067;Parent=Msa1332940-mRNA-1 |
chr8_4 | exon | 52900158 | 52900724 | 52900158 | ID=Msa1332940-mRNA-1:exon:16066;Parent=Msa1332940-mRNA-1 |
chr8_4 | five_prime_UTR | 52900703 | 52900724 | 52900703 | ID=Msa1332940-mRNA-1:five_prime_utr;Parent=Msa1332940-mRNA-1 |
chr8_4 | CDS | 52900158 | 52900702 | 52900158 | ID=Msa1332940-mRNA-1:cds;Parent=Msa1332940-mRNA-1 |
chr8_4 | CDS | 52899678 | 52899821 | 52899678 | ID=Msa1332940-mRNA-1:cds;Parent=Msa1332940-mRNA-1 |
chr8_4 | CDS | 52898822 | 52899401 | 52898822 | ID=Msa1332940-mRNA-1:cds;Parent=Msa1332940-mRNA-1 |
Gene Sequence |
Protein sequence |