AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1219390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219390 MtrunA17_Chr2g0302391 39.037 374 136 14 1 297 1 359 8.42e-66 212
Msa1219390 MtrunA17_Chr7g0270831 43.726 263 100 8 52 279 94 343 2.33e-52 177
Msa1219390 MtrunA17_Chr3g0099641 51.031 194 81 7 116 307 226 407 1.57e-51 176
Msa1219390 MtrunA17_Chr2g0322391 51.705 176 67 5 123 291 330 494 4.77e-47 166
Msa1219390 MtrunA17_Chr4g0075201 39.928 278 97 6 58 276 124 390 3.85e-46 162
Msa1219390 MtrunA17_Chr4g0025051 53.143 175 67 5 123 293 316 479 4.70e-46 164
Msa1219390 MtrunA17_Chr2g0288871 54.271 199 73 8 101 296 262 445 2.53e-43 155
Msa1219390 MtrunA17_Chr4g0025061 49.711 173 64 6 124 288 342 499 6.27e-42 152
Msa1219390 MtrunA17_Chr4g0024391 46.486 185 82 6 108 288 197 368 6.05e-38 140
Msa1219390 MtrunA17_Chr7g0216891 47.568 185 71 6 111 275 188 366 1.78e-35 134
Msa1219390 MtrunA17_Chr4g0060271 50.256 195 80 6 86 274 206 389 7.69e-35 133
Msa1219390 MtrunA17_Chr4g0051181 56.800 125 47 3 126 247 227 347 1.28e-33 128
Msa1219390 MtrunA17_Chr5g0418191 36.601 153 87 4 93 241 271 417 4.47e-23 98.6
Msa1219390 MtrunA17_Chr5g0418191 35.294 119 68 5 143 259 152 263 5.61e-11 62.8
Msa1219390 MtrunA17_Chr5g0432161 51.087 92 37 4 124 214 403 487 6.37e-22 95.9
Msa1219390 MtrunA17_Chr4g0042831 51.807 83 33 3 127 208 263 339 9.65e-22 94.4
Msa1219390 MtrunA17_Chr3g0101131 41.593 113 59 3 97 208 370 476 2.19e-21 94.4
Msa1219390 MtrunA17_Chr7g0218081 44.681 94 46 3 127 220 395 482 3.07e-21 93.6
Msa1219390 MtrunA17_Chr5g0419241 64.912 57 19 1 117 173 52 107 4.09e-21 86.3
Msa1219390 MtrunA17_Chr5g0445311 36.810 163 83 6 126 284 348 494 4.27e-21 93.6
Msa1219390 MtrunA17_Chr3g0106491 50.000 84 35 3 124 206 347 424 1.02e-20 92.0
Msa1219390 MtrunA17_Chr4g0051881 46.226 106 51 3 129 234 165 264 2.91e-20 89.4
Msa1219390 MtrunA17_Chr3g0079691 45.000 100 45 4 124 219 477 570 3.38e-20 90.9
Msa1219390 MtrunA17_Chr7g0270191 38.261 115 63 3 106 220 112 218 5.94e-20 87.8
Msa1219390 MtrunA17_Chr3g0136961 28.745 247 126 8 27 249 5 225 7.67e-20 87.8
Msa1219390 MtrunA17_Chr4g0001361 42.000 100 52 4 118 215 136 231 1.84e-19 87.0
Msa1219390 MtrunA17_Chr7g0243891 46.875 96 43 4 119 213 351 439 1.96e-19 88.6
Msa1219390 MtrunA17_Chr1g0194481 37.795 127 69 4 84 210 105 221 2.62e-19 86.7
Msa1219390 MtrunA17_Chr7g0249311 42.424 99 51 3 124 222 374 466 3.26e-19 88.2
Msa1219390 MtrunA17_Chr7g0263531 49.351 77 34 2 130 206 349 420 4.64e-19 87.0
Msa1219390 MtrunA17_Chr7g0263531 42.500 80 38 4 143 221 190 262 1.73e-11 64.7
Msa1219390 MtrunA17_Chr7g0249301 45.882 85 41 2 124 208 274 353 6.74e-19 86.3
Msa1219390 MtrunA17_Chr7g0249301 34.507 142 81 5 141 276 61 196 1.19e-12 67.8
Msa1219390 MtrunA17_Chr4g0004911 45.783 83 40 2 124 206 318 395 7.75e-19 86.7
Msa1219390 MtrunA17_Chr1g0150271 32.474 194 113 9 58 245 12 193 8.73e-19 84.0
Msa1219390 MtrunA17_Chr4g0068541 44.706 85 42 2 126 210 192 271 1.40e-18 85.5
Msa1219390 MtrunA17_Chr2g0294231 39.252 107 57 3 126 232 187 285 3.56e-18 84.0
Msa1219390 MtrunA17_Chr5g0447701 42.268 97 50 3 127 223 237 327 5.90e-18 83.6
Msa1219390 MtrunA17_Chr2g0333851 34.857 175 79 8 62 206 60 229 7.40e-18 82.4
Msa1219390 MtrunA17_Chr5g0443131 44.706 85 42 2 129 213 144 223 1.69e-17 81.3
Msa1219390 MtrunA17_Chr1g0188941 41.000 100 52 3 108 206 17 110 2.06e-17 76.6
Msa1219390 MtrunA17_Chr1g0150281 29.167 216 101 7 27 208 5 202 2.36e-17 80.5
Msa1219390 MtrunA17_Chr7g0224801 49.333 75 33 2 131 205 82 151 2.79e-17 77.8
Msa1219390 MtrunA17_Chr3g0129361 41.414 99 51 3 126 224 128 219 7.29e-17 77.8
Msa1219390 MtrunA17_Chr1g0150801 46.753 77 36 2 127 203 87 158 1.12e-16 76.3
Msa1219390 MtrunA17_Chr8g0379461 56.923 65 24 2 142 206 76 136 1.38e-16 77.8
Msa1219390 MtrunA17_Chr2g0284321 53.030 66 27 2 142 207 35 96 3.10e-16 76.3
Msa1219390 MtrunA17_Chr4g0074001 43.210 81 41 2 126 206 343 418 4.55e-16 78.6
Msa1219390 MtrunA17_Chr8g0335811 48.101 79 36 2 126 204 138 211 5.46e-16 75.9
Msa1219390 MtrunA17_Chr5g0418781 46.154 78 37 2 126 203 108 180 6.25e-16 76.3
Msa1219390 MtrunA17_Chr2g0319961 51.351 74 32 2 133 206 71 140 6.99e-16 75.9
Msa1219390 MtrunA17_Chr8g0386241 42.169 83 43 2 127 209 88 165 8.03e-16 74.3
Msa1219390 MtrunA17_Chr3g0129321 46.154 78 37 2 129 206 105 177 1.26e-15 74.3
Msa1219390 MtrunA17_Chr8g0383251 42.308 78 40 2 129 206 95 167 4.58e-15 72.0
Msa1219390 MtrunA17_Chr1g0147881 43.750 80 41 2 126 205 246 321 7.72e-15 73.9
Msa1219390 MtrunA17_Chr7g0248721 43.182 88 41 3 129 216 128 206 8.90e-15 72.0
Msa1219390 MtrunA17_Chr2g0289181 42.308 78 41 2 140 217 12 85 1.33e-14 72.0
Msa1219390 MtrunA17_Chr6g0485431 44.872 78 39 1 129 206 141 214 1.91e-14 73.2
Msa1219390 MtrunA17_Chr4g0053281 50.000 66 29 2 143 208 267 328 2.02e-14 72.8
Msa1219390 MtrunA17_Chr5g0401821 43.750 80 41 2 126 205 183 258 5.68e-14 70.9
Msa1219390 MtrunA17_Chr4g0069481 81.132 53 5 2 75 122 1 53 5.84e-14 66.2
Msa1219390 MtrunA17_Chr1g0184691 49.231 65 29 2 143 207 294 354 7.56e-14 71.2
Msa1219390 MtrunA17_Chr1g0189391 36.458 96 48 2 118 204 64 155 2.48e-13 69.7
Msa1219390 MtrunA17_Chr1g0202461 37.615 109 58 4 98 206 223 321 3.82e-13 69.3
Msa1219390 MtrunA17_Chr4g0071521 47.692 65 30 2 140 204 243 303 1.60e-12 67.0
Msa1219390 MtrunA17_Chr8g0387501 45.455 66 32 2 141 206 128 189 3.15e-12 65.9
Msa1219390 MtrunA17_Chr7g0228941 31.897 116 66 5 90 203 5 109 2.15e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1219390 AT4G04450.2 56.875 160 60 4 117 276 173 323 1.82e-51 175
Msa1219390 AT4G04450.1 56.875 160 60 4 117 276 267 417 1.06e-50 175
Msa1219390 AT1G62300.1 54.118 170 67 6 107 276 278 436 7.22e-43 155
Msa1219390 AT5G15130.1 48.469 196 71 7 116 297 201 380 7.17e-39 144
Msa1219390 AT5G15130.2 48.469 196 71 7 116 297 159 338 8.26e-39 143
Msa1219390 AT4G22070.4 56.522 161 56 4 117 275 272 420 8.78e-39 143
Msa1219390 AT4G22070.3 56.522 161 56 4 117 275 272 420 8.78e-39 143
Msa1219390 AT4G22070.2 56.522 161 56 4 117 275 272 420 8.78e-39 143
Msa1219390 AT4G22070.1 56.522 161 56 4 117 275 272 420 8.78e-39 143
Msa1219390 AT4G01720.1 35.021 237 96 7 25 207 68 300 1.23e-36 137
Msa1219390 AT1G68150.1 59.633 109 40 2 126 234 219 323 1.33e-36 135
Msa1219390 AT1G18860.1 52.318 151 67 3 125 275 222 367 5.05e-32 125
Msa1219390 AT1G69810.1 45.614 171 73 6 109 278 173 324 2.15e-30 118
Msa1219390 AT1G69810.2 45.882 170 72 6 109 277 115 265 2.33e-30 117
Msa1219390 AT2G03340.1 41.525 118 61 4 97 213 370 480 1.82e-24 103
Msa1219390 AT1G13960.1 41.228 114 59 4 95 206 361 468 2.91e-23 100
Msa1219390 AT1G13960.2 41.228 114 59 4 95 206 208 315 3.94e-23 98.2
Msa1219390 AT2G38470.1 47.917 96 44 3 124 219 344 433 3.31e-22 97.1
Msa1219390 AT4G18170.1 43.636 110 48 3 110 210 131 235 1.89e-21 92.8
Msa1219390 AT1G29860.1 47.191 89 42 2 126 214 120 203 4.60e-21 91.3
Msa1219390 AT2G04880.2 44.944 89 44 2 124 212 265 348 8.19e-21 92.8
Msa1219390 AT2G04880.1 44.944 89 44 2 124 212 289 372 1.01e-20 92.4
Msa1219390 AT5G07100.2 42.453 106 51 3 115 215 114 214 3.14e-20 87.4
Msa1219390 AT5G07100.4 42.453 106 51 3 115 215 114 214 3.14e-20 87.4
Msa1219390 AT5G07100.5 42.453 106 51 3 115 215 114 214 3.14e-20 87.4
Msa1219390 AT5G07100.3 42.453 106 51 3 115 215 114 214 3.14e-20 87.4
Msa1219390 AT2G25000.2 37.714 175 76 9 58 209 2 166 3.39e-20 87.8
Msa1219390 AT2G25000.4 37.714 175 76 9 58 209 2 166 3.39e-20 87.8
Msa1219390 AT5G56270.1 50.000 86 36 3 124 208 469 548 4.09e-20 91.3
Msa1219390 AT3G01080.2 49.383 81 34 3 127 206 329 403 4.70e-20 90.5
Msa1219390 AT2G25000.3 37.714 175 76 9 58 209 24 188 5.16e-20 87.8
Msa1219390 AT3G01080.1 50.633 79 32 3 129 206 293 365 5.80e-20 90.1
Msa1219390 AT5G07100.1 42.453 106 51 3 115 215 207 307 5.92e-20 88.6
Msa1219390 AT2G25000.1 37.714 175 76 9 58 209 45 209 7.96e-20 87.4
Msa1219390 AT5G13080.1 48.750 80 36 2 129 208 54 128 1.09e-19 84.0
Msa1219390 AT5G46350.1 40.458 131 65 4 129 253 170 293 1.13e-19 88.2
Msa1219390 AT2G30250.1 46.512 86 41 2 125 210 311 391 1.78e-19 88.2
Msa1219390 AT5G49520.1 42.342 111 50 4 126 236 205 301 1.91e-19 88.2
Msa1219390 AT5G41570.1 46.316 95 46 2 109 203 65 154 1.94e-19 84.3
Msa1219390 AT4G26640.5 44.706 85 42 2 122 206 185 264 2.44e-19 87.8
Msa1219390 AT4G26640.6 44.706 85 42 2 122 206 185 264 2.44e-19 87.8
Msa1219390 AT4G26640.4 44.706 85 42 2 122 206 185 264 2.44e-19 87.8
Msa1219390 AT4G26640.3 44.706 85 42 2 122 206 185 264 2.44e-19 87.8
Msa1219390 AT4G26640.7 44.706 85 42 2 122 206 321 400 2.71e-19 88.6
Msa1219390 AT4G26640.1 44.706 85 42 2 122 206 289 368 3.35e-19 88.2
Msa1219390 AT4G26640.2 44.706 85 42 2 122 206 361 440 3.82e-19 88.2
Msa1219390 AT4G31800.1 31.349 252 110 12 30 224 9 254 8.94e-19 85.5
Msa1219390 AT5G26170.1 46.753 77 36 2 128 204 99 170 1.26e-18 82.0
Msa1219390 AT4G30935.1 36.154 130 72 4 126 254 315 434 2.14e-18 85.5
Msa1219390 AT4G31800.2 38.843 121 57 5 117 224 73 189 2.44e-18 82.8
Msa1219390 AT1G64000.1 52.000 75 31 2 129 203 101 170 4.86e-18 80.9
Msa1219390 AT2G47260.1 45.882 85 41 2 126 210 158 237 7.34e-18 83.2
Msa1219390 AT2G46130.1 50.667 75 32 2 129 203 17 86 1.19e-17 77.4
Msa1219390 AT3G01970.1 48.718 78 35 2 128 205 51 123 1.29e-17 78.6
Msa1219390 AT1G80840.1 33.708 178 80 8 62 206 34 206 2.39e-17 81.3
Msa1219390 AT4G26440.1 37.762 143 73 6 124 262 354 484 4.22e-17 82.0
Msa1219390 AT1G69310.4 43.956 91 43 3 126 213 131 216 3.28e-16 77.8
Msa1219390 AT1G69310.2 43.956 91 43 3 126 213 131 216 3.28e-16 77.8
Msa1219390 AT1G69310.1 43.956 91 43 3 126 213 131 216 3.28e-16 77.8
Msa1219390 AT2G44745.1 46.154 78 37 2 126 203 129 201 1.28e-15 74.7
Msa1219390 AT3G62340.1 48.718 78 35 2 129 206 105 177 1.47e-15 75.9
Msa1219390 AT2G37260.3 51.389 72 27 3 141 209 268 334 2.07e-15 76.3
Msa1219390 AT2G37260.3 45.679 81 34 5 143 220 86 159 3.49e-11 63.5
Msa1219390 AT2G37260.2 51.389 72 27 3 141 209 266 332 2.16e-15 76.3
Msa1219390 AT2G37260.2 45.679 81 34 5 143 220 84 157 3.66e-11 63.5
Msa1219390 AT1G55600.1 41.176 85 45 2 124 208 289 368 2.44e-15 76.6
Msa1219390 AT2G37260.1 51.389 72 27 3 141 209 348 414 2.57e-15 76.3
Msa1219390 AT2G37260.1 45.679 81 34 5 143 220 166 239 4.13e-11 63.9
Msa1219390 AT2G23320.1 52.381 63 26 2 143 205 241 299 5.32e-15 74.7
Msa1219390 AT5G64810.1 46.667 75 35 2 129 203 97 166 7.08e-15 72.4
Msa1219390 AT4G39410.1 41.053 95 49 3 125 219 206 293 7.36e-15 73.9
Msa1219390 AT4G24240.1 47.674 86 35 4 126 205 259 340 1.30e-14 73.9
Msa1219390 AT3G58710.1 45.122 82 41 2 133 214 62 139 3.49e-14 71.6
Msa1219390 AT2G30590.1 48.571 70 32 2 143 212 314 379 3.91e-14 72.8
Msa1219390 AT3G58710.2 45.122 82 41 2 133 214 61 138 4.11e-14 71.6
Msa1219390 AT4G23550.1 46.341 82 40 2 140 221 138 215 1.22e-13 70.5
Msa1219390 AT5G28650.1 53.448 58 23 2 147 204 267 320 1.54e-13 70.5
Msa1219390 AT3G04670.1 53.448 58 23 2 147 204 267 320 2.27e-13 70.1
Msa1219390 AT5G52830.1 51.471 68 29 2 139 206 162 225 2.39e-13 70.1
Msa1219390 AT2G46130.2 45.333 75 32 2 129 203 17 82 6.87e-13 64.3
Msa1219390 AT2G34830.1 43.373 83 42 3 125 206 197 275 7.52e-13 68.9
Msa1219390 AT2G34830.2 43.373 83 42 3 125 206 206 284 8.34e-13 68.9
Msa1219390 AT2G24570.1 43.590 78 40 2 126 203 227 300 1.03e-12 68.2
Msa1219390 AT4G31550.1 42.308 78 41 2 126 203 230 303 2.63e-12 67.0
Msa1219390 AT4G31550.2 49.180 61 27 2 143 203 246 302 2.66e-12 67.0
Msa1219390 AT1G30650.1 42.169 83 43 3 125 206 199 277 2.85e-12 67.4
Msa1219390 AT1G69310.3 39.560 91 43 3 126 213 131 212 9.98e-12 64.7

Find 86 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACATGTAAGTTTAATTT+TGG 0.143131 8_1:-82233722 None:intergenic
GCATTGAGTATGTTACTTTC+TGG 0.252753 8_1:+82233218 Msa1219390:CDS
TGTCTTCTAATGTTTCAATT+AGG 0.256888 8_1:+82233499 Msa1219390:three_prime_UTR
GGCCTACTATCGTTGCAATA+TGG 0.277822 8_1:+82231800 Msa1219390:CDS
TGGTAGTGGTTTGAAGAAAT+TGG 0.304052 8_1:-82233422 None:intergenic
CTCAGACTGTTGAGGGTAAC+AGG 0.332956 8_1:-82233466 None:intergenic
GAAATCTGATCTTGCCCTAA+TGG 0.338187 8_1:-82231541 None:intergenic
AATTAAGGATCCGTCTATTA+AGG 0.344577 8_1:+82233578 Msa1219390:three_prime_UTR
AATCAATAAACAAATTATAA+TGG 0.352000 8_1:+82231470 Msa1219390:CDS
CTTAATTCAGTTGGGGTGGC+TGG 0.357657 8_1:+82231302 Msa1219390:intron
TAGTAGGCCCGGGGACAGTA+TGG 0.357768 8_1:-82231786 None:intergenic
GAAAAGCTAGAGTGTCCATT+AGG 0.360477 8_1:+82231526 Msa1219390:CDS
TCTTCAGAATAAGTTCTTAG+TGG 0.367894 8_1:+82231404 Msa1219390:CDS
GGGTGTCGATGGAGAAAATA+TGG 0.370995 8_1:+82231741 Msa1219390:CDS
GCCTACTATCGTTGCAATAT+GGG 0.383038 8_1:+82231801 Msa1219390:CDS
CTTGCTGTCAACCTGGCTGC+TGG 0.390055 8_1:-82233182 None:intergenic
TTCACACACAACATCTATAA+AGG 0.401167 8_1:-82233550 None:intergenic
GAAGAAGTTATTAGAGGGTT+GGG 0.418808 8_1:-82233387 None:intergenic
GAATTTGAAGAAGTTATTAG+AGG 0.419637 8_1:-82233393 None:intergenic
GGCTGGTCTTGATTATTCAT+TGG 0.421246 8_1:-82231148 None:intergenic
TAAGGTAGAGGAGGTGAAGA+GGG 0.428070 8_1:+82231329 Msa1219390:CDS
CTATCGTTGCAATATGGGAT+TGG 0.438226 8_1:+82231806 Msa1219390:CDS
TGTTGTGCTTGCTGTCAACC+TGG 0.441414 8_1:-82233189 None:intergenic
GGTTTGAAGAAATTGGCATT+TGG 0.441998 8_1:-82233415 None:intergenic
TTACATGTGCAGGTAGGAAT+AGG 0.443212 8_1:+82231079 Msa1219390:intron
TAGATGAGGAGGAGGAGAAG+AGG 0.450559 8_1:-82233286 None:intergenic
GAGGTTTGCATTTGAGAAAG+TGG 0.459125 8_1:-82233267 None:intergenic
GGAAATACTAGATGAGGAGG+AGG 0.461060 8_1:-82233294 None:intergenic
GGCAAGATCAGATTTCTCAT+TGG 0.466162 8_1:+82231548 Msa1219390:CDS
CTAAGGTAGAGGAGGTGAAG+AGG 0.466462 8_1:+82231328 Msa1219390:CDS
TGAAGAAGTTATTAGAGGGT+TGG 0.467313 8_1:-82233388 None:intergenic
AAAAGCTAGAGTGTCCATTA+GGG 0.467374 8_1:+82231527 Msa1219390:CDS
TATCGTTGCAATATGGGATT+GGG 0.468985 8_1:+82231807 Msa1219390:CDS
ACCATGTCCGGTTCGTAAGC+AGG 0.472193 8_1:+82231836 Msa1219390:CDS
TGTTGAGGGTAACAGGAAAC+AGG 0.477530 8_1:-82233459 None:intergenic
TCCCATATTGCAACGATAGT+AGG 0.480944 8_1:-82231802 None:intergenic
GGTAACAGGAAACAGGAAAC+AGG 0.482227 8_1:-82233452 None:intergenic
ATTGGGAACAACACCATGTC+CGG 0.484093 8_1:+82231824 Msa1219390:CDS
GTTGGGGTGGCTGGAAACTA+AGG 0.485627 8_1:+82231311 Msa1219390:intron
ATCACGTCCGACTATAACAT+TGG 0.489630 8_1:+82233358 Msa1219390:CDS
ATTATATCAATCTGTAATGC+AGG 0.490831 8_1:+82233784 Msa1219390:three_prime_UTR
TATTAGGTGATGGAGATTGT+TGG 0.491707 8_1:-82231446 None:intergenic
AGACAAGCCAGTGGAGTTTG+AGG 0.493276 8_1:-82233315 None:intergenic
TATTGCAACGATAGTAGGCC+CGG 0.496234 8_1:-82231797 None:intergenic
TGAGGAAATACTAGATGAGG+AGG 0.496702 8_1:-82233297 None:intergenic
ATGAGATTACTTCGAGTTGA+GGG 0.498634 8_1:-82231174 None:intergenic
ATTACTACCTGCTTACGAAC+CGG 0.503938 8_1:-82231843 None:intergenic
AGGCTAACCCATACTGTCCC+CGG 0.504032 8_1:+82231778 Msa1219390:CDS
CTTCGAGTTGAGGGATAGGC+TGG 0.505114 8_1:-82231165 None:intergenic
GCTGTCAACCTGGCTGCTGG+TGG 0.515071 8_1:-82233179 None:intergenic
AAACAGGAAACGGTTGGTAG+TGG 0.516044 8_1:-82233436 None:intergenic
AGTATTTCCTCAAACTCCAC+TGG 0.528040 8_1:+82233308 Msa1219390:CDS
ACAATCCCTCAGACTGTTGA+GGG 0.532754 8_1:-82233473 None:intergenic
CTGTTACCCTCAACAGTCTG+AGG 0.534144 8_1:+82233467 Msa1219390:CDS
ACCTGCTTACGAACCGGACA+TGG 0.541309 8_1:-82231837 None:intergenic
TGCATCATAAACAGGTTCAA+AGG 0.552379 8_1:+82233096 Msa1219390:intron
GTTTGAGGAAATACTAGATG+AGG 0.556342 8_1:-82233300 None:intergenic
ATTCACTTCCACCAGCAGCC+AGG 0.556535 8_1:+82233171 Msa1219390:CDS
ATTACTTCGAGTTGAGGGAT+AGG 0.558574 8_1:-82231169 None:intergenic
AACTAGTACAAGTTGATGAA+AGG 0.566203 8_1:+82230944 Msa1219390:CDS
GATTGTGATCAGATGAGTGA+TGG 0.566947 8_1:+82231720 Msa1219390:intron
AATTTGAAGAAGTTATTAGA+GGG 0.567700 8_1:-82233392 None:intergenic
GGCTAACCCATACTGTCCCC+GGG 0.570884 8_1:+82231779 Msa1219390:CDS
TATGAGATTACTTCGAGTTG+AGG 0.576850 8_1:-82231175 None:intergenic
TGTTACCCTCAACAGTCTGA+GGG 0.580147 8_1:+82233468 Msa1219390:CDS
TCTAATGCTGCCTTAATAGA+CGG 0.580852 8_1:-82233588 None:intergenic
TGTGTGTGAAGCTATAATTA+AGG 0.581431 8_1:+82233563 Msa1219390:three_prime_UTR
AGATGAGTGATGGGTGTCGA+TGG 0.590232 8_1:+82231730 Msa1219390:intron
GTTAAGTCCAATGTTATAGT+CGG 0.590914 8_1:-82233365 None:intergenic
GTGGCTGGAAACTAAGGTAG+AGG 0.593444 8_1:+82231317 Msa1219390:CDS
TGGACTTAATTCAGTTGGGG+TGG 0.600038 8_1:+82231298 Msa1219390:intron
ATTGTGATCAGATGAGTGAT+GGG 0.602207 8_1:+82231721 Msa1219390:intron
ATTGCAACGATAGTAGGCCC+GGG 0.603252 8_1:-82231796 None:intergenic
CACAATCCCTCAGACTGTTG+AGG 0.603844 8_1:-82233474 None:intergenic
AGGAAACAGGAAACAGGAAA+CGG 0.610151 8_1:-82233446 None:intergenic
CAGGTAGGAATAGGATGTAG+TGG 0.612215 8_1:+82231088 Msa1219390:intron
ATATGGACAAAAGATATCAA+AGG 0.627500 8_1:+82231758 Msa1219390:CDS
AACAGGAAACAGGAAACGGT+TGG 0.630955 8_1:-82233442 None:intergenic
GGTTCAACTACTAGTTCACA+TGG 0.632921 8_1:+82233239 Msa1219390:CDS
ACACAACATCTATAAAGGCA+AGG 0.647254 8_1:-82233545 None:intergenic
GCTGGAAACTAAGGTAGAGG+AGG 0.650640 8_1:+82231320 Msa1219390:CDS
AGTATTCATCACAACATACG+AGG 0.673709 8_1:+82233136 Msa1219390:CDS
TTATCTATGCTACATGACTG+AGG 0.677038 8_1:-82233645 None:intergenic
ATAGAAATCAGACAAGCCAG+TGG 0.705257 8_1:-82233324 None:intergenic
TTGCAACGATAGTAGGCCCG+GGG 0.707550 8_1:-82231795 None:intergenic
GTATTCATCACAACATACGA+GGG 0.732692 8_1:+82233137 Msa1219390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAATAAAAAAAATAT+TGG - chr8_1:82231275-82231294 None:intergenic 0.0%
!! AAATATACTAATTAATTACA+TGG - chr8_1:82231004-82231023 None:intergenic 10.0%
!!! CTTTTGAATAATAATTTATA+GGG + chr8_1:82231053-82231072 Msa1219390:intron 10.0%
!!! TTTTGAATAATAATTTATAG+GGG + chr8_1:82231054-82231073 Msa1219390:intron 10.0%
!!! TTTTTTTTATTTTTTATGAG+TGG + chr8_1:82231278-82231297 Msa1219390:intron 10.0%
!!! ATTTGTTTATTGATTTTATT+AGG - chr8_1:82231465-82231484 None:intergenic 10.0%
!! AATCAATAAACAAATTATAA+TGG + chr8_1:82231470-82231489 Msa1219390:CDS 10.0%
!! CATAAAATAATATATATAGA+TGG - chr8_1:82231671-82231690 None:intergenic 10.0%
!! CAATAATCAATATACTAATT+AGG - chr8_1:82231033-82231052 None:intergenic 15.0%
!!! GCTTTTGAATAATAATTTAT+AGG + chr8_1:82231052-82231071 Msa1219390:intron 15.0%
!! ATACTAATTAATTACATGGA+TGG - chr8_1:82231000-82231019 None:intergenic 20.0%
!! ACTTAAACTGATACATATAT+AGG + chr8_1:82231198-82231217 Msa1219390:intron 20.0%
!!! TTATTGATTTTATTAGGTGA+TGG - chr8_1:82231459-82231478 None:intergenic 20.0%
!! ATTGAAATATGTATAGTAAG+TGG - chr8_1:82231586-82231605 None:intergenic 20.0%
!! CAATCAAATTACTTAATTAG+CGG - chr8_1:82231705-82231724 None:intergenic 20.0%
!!! TTGATTTGCTTCAAAATTAA+AGG - chr8_1:82231915-82231934 None:intergenic 20.0%
!! AAAAATCAGTATCATGTATT+GGG - chr8_1:82232054-82232073 None:intergenic 20.0%
!! AAAAAATCAGTATCATGTAT+TGG - chr8_1:82232055-82232074 None:intergenic 20.0%
!! GAATAACTAATAAATAACCT+AGG - chr8_1:82232152-82232171 None:intergenic 20.0%
!! TCTTGTTAAAGATTTCTAAA+TGG + chr8_1:82232476-82232495 Msa1219390:intron 20.0%
!! CTTGTTAAAGATTTCTAAAT+GGG + chr8_1:82232477-82232496 Msa1219390:intron 20.0%
!! CTACTAAATTAGAAAACTTA+TGG - chr8_1:82232647-82232666 None:intergenic 20.0%
!!! CATAAGTTTTCTAATTTAGT+AGG + chr8_1:82232645-82232664 Msa1219390:intron 20.0%
!! AATTTGAAGAAGTTATTAGA+GGG - chr8_1:82233395-82233414 None:intergenic 20.0%
!!! CAAACATGTAAGTTTAATTT+TGG - chr8_1:82233725-82233744 None:intergenic 20.0%
! ATATGGACAAAAGATATCAA+AGG + chr8_1:82231758-82231777 Msa1219390:CDS 25.0%
!!! GGTAGTAATTCTTTAATTTG+TGG + chr8_1:82231857-82231876 Msa1219390:intron 25.0%
! CGTTTACTATGAATGTAAAA+TGG - chr8_1:82232024-82232043 None:intergenic 25.0%
! AAAATCAGTATCATGTATTG+GGG - chr8_1:82232053-82232072 None:intergenic 25.0%
! AAGACCAATAACAAATATTG+CGG - chr8_1:82232381-82232400 None:intergenic 25.0%
!!! TTTGTTATTGGTCTTCTTTT+CGG + chr8_1:82232386-82232405 Msa1219390:intron 25.0%
! ATAAATAAAATGGAGACATG+TGG - chr8_1:82232583-82232602 None:intergenic 25.0%
!!! TCTCCATTTTATTTATCGTT+TGG + chr8_1:82232587-82232606 Msa1219390:intron 25.0%
! AGTCCAAACGATAAATAAAA+TGG - chr8_1:82232593-82232612 None:intergenic 25.0%
! TTTCTAATTTAGTAGGATAG+TGG + chr8_1:82232652-82232671 Msa1219390:intron 25.0%
! TCAACTATCTATTCTACAAT+AGG - chr8_1:82232682-82232701 None:intergenic 25.0%
! TACTACTACAAAAGTAGTAT+TGG + chr8_1:82232959-82232978 Msa1219390:intron 25.0%
! GAATTTGAAGAAGTTATTAG+AGG - chr8_1:82233396-82233415 None:intergenic 25.0%
! TGTCTTCTAATGTTTCAATT+AGG + chr8_1:82233499-82233518 Msa1219390:three_prime_UTR 25.0%
! ATTATATCAATCTGTAATGC+AGG + chr8_1:82233784-82233803 Msa1219390:three_prime_UTR 25.0%
ATTGTTGCTACAAAAATGGA+AGG + chr8_1:82230904-82230923 Msa1219390:exon 30.0%
TTGTTGCTACAAAAATGGAA+GGG + chr8_1:82230905-82230924 Msa1219390:exon 30.0%
!! AACTAGTACAAGTTGATGAA+AGG + chr8_1:82230944-82230963 Msa1219390:CDS 30.0%
TCTTCAGAATAAGTTCTTAG+TGG + chr8_1:82231404-82231423 Msa1219390:CDS 30.0%
TTGCTTCAAAATTAAAGGTG+TGG - chr8_1:82231910-82231929 None:intergenic 30.0%
AATCCATATTTGAGCAACTA+TGG - chr8_1:82232256-82232275 None:intergenic 30.0%
AGTAGTATTAGAGTTGCATT+CGG - chr8_1:82232759-82232778 None:intergenic 30.0%
AGTACTAGTGAAATGTTTAG+TGG + chr8_1:82232801-82232820 Msa1219390:intron 30.0%
ACAATAAGTTAATCACTACC+CGG - chr8_1:82232844-82232863 None:intergenic 30.0%
GGTAGTGATTAACTTATTGT+CGG + chr8_1:82232844-82232863 Msa1219390:intron 30.0%
TGAAATGTTAGTAACGTTGA+GGG - chr8_1:82232893-82232912 None:intergenic 30.0%
ATGAAATGTTAGTAACGTTG+AGG - chr8_1:82232894-82232913 None:intergenic 30.0%
TACAAATGTGCATCATAAAC+AGG + chr8_1:82233088-82233107 Msa1219390:intron 30.0%
GTTAAGTCCAATGTTATAGT+CGG - chr8_1:82233368-82233387 None:intergenic 30.0%
TTCACACACAACATCTATAA+AGG - chr8_1:82233553-82233572 None:intergenic 30.0%
TGTGTGTGAAGCTATAATTA+AGG + chr8_1:82233563-82233582 Msa1219390:three_prime_UTR 30.0%
AATTAAGGATCCGTCTATTA+AGG + chr8_1:82233578-82233597 Msa1219390:three_prime_UTR 30.0%
!! ATGAGATTACTTCGAGTTGA+GGG - chr8_1:82231177-82231196 None:intergenic 35.0%
!! TATGAGATTACTTCGAGTTG+AGG - chr8_1:82231178-82231197 None:intergenic 35.0%
! ATGAGTGGACTTAATTCAGT+TGG + chr8_1:82231293-82231312 Msa1219390:intron 35.0%
! TGAGTGGACTTAATTCAGTT+GGG + chr8_1:82231294-82231313 Msa1219390:intron 35.0%
!! TATTAGGTGATGGAGATTGT+TGG - chr8_1:82231449-82231468 None:intergenic 35.0%
! AAAAGCTAGAGTGTCCATTA+GGG + chr8_1:82231527-82231546 Msa1219390:CDS 35.0%
ATTGTGATCAGATGAGTGAT+GGG + chr8_1:82231721-82231740 Msa1219390:intron 35.0%
TATCGTTGCAATATGGGATT+GGG + chr8_1:82231807-82231826 Msa1219390:CDS 35.0%
!!! AGTATCGAAGGTTTTGAAGT+GGG - chr8_1:82231974-82231993 None:intergenic 35.0%
!!! TAGTATCGAAGGTTTTGAAG+TGG - chr8_1:82231975-82231994 None:intergenic 35.0%
AGTCCATAGTTGCTCAAATA+TGG + chr8_1:82232250-82232269 Msa1219390:intron 35.0%
! GTACCTTAGAGTATCAATGT+TGG - chr8_1:82232295-82232314 None:intergenic 35.0%
AACGTACATAAACATCAAGG+TGG - chr8_1:82232345-82232364 None:intergenic 35.0%
GACAACGTACATAAACATCA+AGG - chr8_1:82232348-82232367 None:intergenic 35.0%
ATAACAAATATTGCGGCAAG+AGG - chr8_1:82232374-82232393 None:intergenic 35.0%
!! CTTGCCGCAATATTTGTTAT+TGG + chr8_1:82232374-82232393 Msa1219390:intron 35.0%
TGTAATTTAAGGAGCAAGAG+TGG - chr8_1:82232556-82232575 None:intergenic 35.0%
CTCTTGCTCCTTAAATTACA+AGG + chr8_1:82232556-82232575 Msa1219390:intron 35.0%
CATGTGGTCCTTGTAATTTA+AGG - chr8_1:82232567-82232586 None:intergenic 35.0%
TGCATCATAAACAGGTTCAA+AGG + chr8_1:82233096-82233115 Msa1219390:intron 35.0%
AGTATTCATCACAACATACG+AGG + chr8_1:82233136-82233155 Msa1219390:CDS 35.0%
GTATTCATCACAACATACGA+GGG + chr8_1:82233137-82233156 Msa1219390:CDS 35.0%
!! GCATTGAGTATGTTACTTTC+TGG + chr8_1:82233218-82233237 Msa1219390:CDS 35.0%
GTTTGAGGAAATACTAGATG+AGG - chr8_1:82233303-82233322 None:intergenic 35.0%
GAAGAAGTTATTAGAGGGTT+GGG - chr8_1:82233390-82233409 None:intergenic 35.0%
TGAAGAAGTTATTAGAGGGT+TGG - chr8_1:82233391-82233410 None:intergenic 35.0%
GGTTTGAAGAAATTGGCATT+TGG - chr8_1:82233418-82233437 None:intergenic 35.0%
!! TGGTAGTGGTTTGAAGAAAT+TGG - chr8_1:82233425-82233444 None:intergenic 35.0%
! AGGTTTTTCTTTGAGTCTGA+GGG - chr8_1:82233528-82233547 None:intergenic 35.0%
! AAGGTTTTTCTTTGAGTCTG+AGG - chr8_1:82233529-82233548 None:intergenic 35.0%
ACACAACATCTATAAAGGCA+AGG - chr8_1:82233548-82233567 None:intergenic 35.0%
TCTAATGCTGCCTTAATAGA+CGG - chr8_1:82233591-82233610 None:intergenic 35.0%
TTATCTATGCTACATGACTG+AGG - chr8_1:82233648-82233667 None:intergenic 35.0%
TATAGGGGAATTACATGTGC+AGG + chr8_1:82231069-82231088 Msa1219390:intron 40.0%
TTACATGTGCAGGTAGGAAT+AGG + chr8_1:82231079-82231098 Msa1219390:intron 40.0%
!! GGCTGGTCTTGATTATTCAT+TGG - chr8_1:82231151-82231170 None:intergenic 40.0%
!! ATTACTTCGAGTTGAGGGAT+AGG - chr8_1:82231172-82231191 None:intergenic 40.0%
GCTTAACTTTGAACTGATGC+TGG + chr8_1:82231248-82231267 Msa1219390:intron 40.0%
! GAGTGGACTTAATTCAGTTG+GGG + chr8_1:82231295-82231314 Msa1219390:intron 40.0%
! GAAAAGCTAGAGTGTCCATT+AGG + chr8_1:82231526-82231545 Msa1219390:CDS 40.0%
GAAATCTGATCTTGCCCTAA+TGG - chr8_1:82231544-82231563 None:intergenic 40.0%
GGCAAGATCAGATTTCTCAT+TGG + chr8_1:82231548-82231567 Msa1219390:CDS 40.0%
GATTGTGATCAGATGAGTGA+TGG + chr8_1:82231720-82231739 Msa1219390:intron 40.0%
GCCTACTATCGTTGCAATAT+GGG + chr8_1:82231801-82231820 Msa1219390:CDS 40.0%
TCCCATATTGCAACGATAGT+AGG - chr8_1:82231805-82231824 None:intergenic 40.0%
CTATCGTTGCAATATGGGAT+TGG + chr8_1:82231806-82231825 Msa1219390:CDS 40.0%
ATTACTACCTGCTTACGAAC+CGG - chr8_1:82231846-82231865 None:intergenic 40.0%
!!! TATCGAAGGTTTTGAAGTGG+GGG - chr8_1:82231972-82231991 None:intergenic 40.0%
!!! GTATCGAAGGTTTTGAAGTG+GGG - chr8_1:82231973-82231992 None:intergenic 40.0%
! AGTGATGCAAGTAGTATCGA+AGG - chr8_1:82231986-82232005 None:intergenic 40.0%
AAATGTGTTTGCGAGAGAGA+GGG - chr8_1:82232099-82232118 None:intergenic 40.0%
TAAATGTGTTTGCGAGAGAG+AGG - chr8_1:82232100-82232119 None:intergenic 40.0%
! CCTTAGAGTATCAATGTTGG+AGG - chr8_1:82232292-82232311 None:intergenic 40.0%
CCTCCAACATTGATACTCTA+AGG + chr8_1:82232289-82232308 Msa1219390:intron 40.0%
GTACATAAACATCAAGGTGG+AGG - chr8_1:82232342-82232361 None:intergenic 40.0%
CTTTAACAAGACCGACAAGA+GGG - chr8_1:82232467-82232486 None:intergenic 40.0%
TCTTTAACAAGACCGACAAG+AGG - chr8_1:82232468-82232487 None:intergenic 40.0%
TTGCATGTGAATCTCCTTGT+TGG + chr8_1:82232518-82232537 Msa1219390:intron 40.0%
GTTGCATTCGGTCATACAAT+AGG - chr8_1:82232747-82232766 None:intergenic 40.0%
GGTTCAACTACTAGTTCACA+TGG + chr8_1:82233239-82233258 Msa1219390:CDS 40.0%
GAGGTTTGCATTTGAGAAAG+TGG - chr8_1:82233270-82233289 None:intergenic 40.0%
TGAGGAAATACTAGATGAGG+AGG - chr8_1:82233300-82233319 None:intergenic 40.0%
AGTATTTCCTCAAACTCCAC+TGG + chr8_1:82233308-82233327 Msa1219390:CDS 40.0%
ATAGAAATCAGACAAGCCAG+TGG - chr8_1:82233327-82233346 None:intergenic 40.0%
ATCACGTCCGACTATAACAT+TGG + chr8_1:82233358-82233377 Msa1219390:CDS 40.0%
AGGAAACAGGAAACAGGAAA+CGG - chr8_1:82233449-82233468 None:intergenic 40.0%
CAGGTAGGAATAGGATGTAG+TGG + chr8_1:82231088-82231107 Msa1219390:intron 45.0%
TGGACTTAATTCAGTTGGGG+TGG + chr8_1:82231298-82231317 Msa1219390:intron 45.0%
TAAGGTAGAGGAGGTGAAGA+GGG + chr8_1:82231329-82231348 Msa1219390:CDS 45.0%
!! GGGTGTCGATGGAGAAAATA+TGG + chr8_1:82231741-82231760 Msa1219390:CDS 45.0%
TATTGCAACGATAGTAGGCC+CGG - chr8_1:82231800-82231819 None:intergenic 45.0%
GGCCTACTATCGTTGCAATA+TGG + chr8_1:82231800-82231819 Msa1219390:CDS 45.0%
ATTGGGAACAACACCATGTC+CGG + chr8_1:82231824-82231843 Msa1219390:CDS 45.0%
!!! ATCGAAGGTTTTGAAGTGGG+GGG - chr8_1:82231971-82231990 None:intergenic 45.0%
CTTGTGTGAATTGATCGCCT+AGG + chr8_1:82232132-82232151 Msa1219390:intron 45.0%
! GAGCAACTATGGACTACACT+TGG - chr8_1:82232245-82232264 None:intergenic 45.0%
!! TTCGGCCTTGTTGAAGACTT+CGG + chr8_1:82232404-82232423 Msa1219390:intron 45.0%
GCGCATCTAAAGAACGAGAA+TGG - chr8_1:82232437-82232456 None:intergenic 45.0%
TCTCCTTGTTGGTCCTTACA+AGG + chr8_1:82232529-82232548 Msa1219390:intron 45.0%
GTTTAGTGGCATGAGACAAG+CGG + chr8_1:82232815-82232834 Msa1219390:intron 45.0%
GGAAATACTAGATGAGGAGG+AGG - chr8_1:82233297-82233316 None:intergenic 45.0%
!! AAACAGGAAACGGTTGGTAG+TGG - chr8_1:82233439-82233458 None:intergenic 45.0%
AACAGGAAACAGGAAACGGT+TGG - chr8_1:82233445-82233464 None:intergenic 45.0%
GGTAACAGGAAACAGGAAAC+AGG - chr8_1:82233455-82233474 None:intergenic 45.0%
TGTTGAGGGTAACAGGAAAC+AGG - chr8_1:82233462-82233481 None:intergenic 45.0%
TGTTACCCTCAACAGTCTGA+GGG + chr8_1:82233468-82233487 Msa1219390:CDS 45.0%
ACAATCCCTCAGACTGTTGA+GGG - chr8_1:82233476-82233495 None:intergenic 45.0%
GGGGAATTACATGTGCAGGT+AGG + chr8_1:82231073-82231092 Msa1219390:intron 50.0%
CTTAATTCAGTTGGGGTGGC+TGG + chr8_1:82231302-82231321 Msa1219390:intron 50.0%
GTGGCTGGAAACTAAGGTAG+AGG + chr8_1:82231317-82231336 Msa1219390:CDS 50.0%
GCTGGAAACTAAGGTAGAGG+AGG + chr8_1:82231320-82231339 Msa1219390:CDS 50.0%
CTAAGGTAGAGGAGGTGAAG+AGG + chr8_1:82231328-82231347 Msa1219390:CDS 50.0%
!! AGATGAGTGATGGGTGTCGA+TGG + chr8_1:82231730-82231749 Msa1219390:intron 50.0%
ATTGCAACGATAGTAGGCCC+GGG - chr8_1:82231799-82231818 None:intergenic 50.0%
!!! TCGAAGGTTTTGAAGTGGGG+GGG - chr8_1:82231970-82231989 None:intergenic 50.0%
!! TCGGCCTTGTTGAAGACTTC+GGG + chr8_1:82232405-82232424 Msa1219390:intron 50.0%
CATGCCCGAAGTCTTCAACA+AGG - chr8_1:82232412-82232431 None:intergenic 50.0%
GGTCCTTGTAAGGACCAACA+AGG - chr8_1:82232535-82232554 None:intergenic 50.0%
GAGCAAGAGTGGTCCTTGTA+AGG - chr8_1:82232545-82232564 None:intergenic 50.0%
!! TGTTGTGCTTGCTGTCAACC+TGG - chr8_1:82233192-82233211 None:intergenic 50.0%
TAGATGAGGAGGAGGAGAAG+AGG - chr8_1:82233289-82233308 None:intergenic 50.0%
AGACAAGCCAGTGGAGTTTG+AGG - chr8_1:82233318-82233337 None:intergenic 50.0%
CTCAGACTGTTGAGGGTAAC+AGG - chr8_1:82233469-82233488 None:intergenic 50.0%
CTGTTACCCTCAACAGTCTG+AGG + chr8_1:82233467-82233486 Msa1219390:CDS 50.0%
CACAATCCCTCAGACTGTTG+AGG - chr8_1:82233477-82233496 None:intergenic 50.0%
!! CTTCGAGTTGAGGGATAGGC+TGG - chr8_1:82231168-82231187 None:intergenic 55.0%
GTTGGGGTGGCTGGAAACTA+AGG + chr8_1:82231311-82231330 Msa1219390:intron 55.0%
AGGCTAACCCATACTGTCCC+CGG + chr8_1:82231778-82231797 Msa1219390:CDS 55.0%
TTGCAACGATAGTAGGCCCG+GGG - chr8_1:82231798-82231817 None:intergenic 55.0%
! ACCATGTCCGGTTCGTAAGC+AGG + chr8_1:82231836-82231855 Msa1219390:CDS 55.0%
ACCTGCTTACGAACCGGACA+TGG - chr8_1:82231840-82231859 None:intergenic 55.0%
GCGCTTGTGAACCCTCTTGT+CGG + chr8_1:82232453-82232472 Msa1219390:intron 55.0%
ATTCACTTCCACCAGCAGCC+AGG + chr8_1:82233171-82233190 Msa1219390:CDS 55.0%
GGCTAACCCATACTGTCCCC+GGG + chr8_1:82231779-82231798 Msa1219390:CDS 60.0%
AGTAGGCCCGGGGACAGTAT+GGG - chr8_1:82231788-82231807 None:intergenic 60.0%
TAGTAGGCCCGGGGACAGTA+TGG - chr8_1:82231789-82231808 None:intergenic 60.0%
GGCATGAGACAAGCGGCAAC+CGG + chr8_1:82232822-82232841 Msa1219390:intron 60.0%
GCATGAGACAAGCGGCAACC+GGG + chr8_1:82232823-82232842 Msa1219390:intron 60.0%
! CTTGCTGTCAACCTGGCTGC+TGG - chr8_1:82233185-82233204 None:intergenic 60.0%
GCTGTCAACCTGGCTGCTGG+TGG - chr8_1:82233182-82233201 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 82230904 82233821 82230904 ID=Msa1219390;Name=Msa1219390
chr8_1 mRNA 82230904 82233821 82230904 ID=Msa1219390-mRNA-1;Parent=Msa1219390;Name=Msa1219390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=15|1|1|1|1|1|5|334|307
chr8_1 exon 82230904 82230984 82230904 ID=Msa1219390-mRNA-1:exon:29203;Parent=Msa1219390-mRNA-1
chr8_1 exon 82231091 82231186 82231091 ID=Msa1219390-mRNA-1:exon:29204;Parent=Msa1219390-mRNA-1
chr8_1 exon 82231312 82231569 82231312 ID=Msa1219390-mRNA-1:exon:29205;Parent=Msa1219390-mRNA-1
chr8_1 exon 82231732 82231857 82231732 ID=Msa1219390-mRNA-1:exon:29206;Parent=Msa1219390-mRNA-1
chr8_1 exon 82233110 82233821 82233110 ID=Msa1219390-mRNA-1:exon:29207;Parent=Msa1219390-mRNA-1
chr8_1 five_prime_UTR 82230904 82230918 82230904 ID=Msa1219390-mRNA-1:five_prime_utr;Parent=Msa1219390-mRNA-1
chr8_1 CDS 82230919 82230984 82230919 ID=Msa1219390-mRNA-1:cds;Parent=Msa1219390-mRNA-1
chr8_1 CDS 82231091 82231186 82231091 ID=Msa1219390-mRNA-1:cds;Parent=Msa1219390-mRNA-1
chr8_1 CDS 82231312 82231569 82231312 ID=Msa1219390-mRNA-1:cds;Parent=Msa1219390-mRNA-1
chr8_1 CDS 82231732 82231857 82231732 ID=Msa1219390-mRNA-1:cds;Parent=Msa1219390-mRNA-1
chr8_1 CDS 82233110 82233487 82233110 ID=Msa1219390-mRNA-1:cds;Parent=Msa1219390-mRNA-1
chr8_1 three_prime_UTR 82233488 82233821 82233488 ID=Msa1219390-mRNA-1:three_prime_utr;Parent=Msa1219390-mRNA-1
Gene Sequence

>Msa1219390

ATGGAAGGGAAAGTTGCACTGCAAAAACTAGTACAAGTTGATGAAAGGATATATGATAAAAATTCTGTAGGAATAGGATGTAGTGGTCTCAGTTTGAGTCTGAATAGTAATTCAGAAGAGCTTCCAATGAATAATCAAGACCAGCCTATCCCTCAACTCGAATTGGGGTGGCTGGAAACTAAGGTAGAGGAGGTGAAGAGGGAGAATCAGATTTTAAGATCTATGTTAAATCAAGTAACTCAACACTATGCACTTCTTCAGAATAAGTTCTTAGTGGAGACGATGCAGCAGCAGAACCAACAATCTCCATCACCTAATAAAATCAATAAACAAATTATAATGGAAGATGATCGAGCATCTGAGTTAGCTTCTTGCAGAAAAGCTAGAGTGTCCATTAGGGCAAGATCAGATTTCTCATTGATGAGTGATGGGTGTCGATGGAGAAAATATGGACAAAAGATATCAAAGGCTAACCCATACTGTCCCCGGGCCTACTATCGTTGCAATATGGGATTGGGAACAACACCATGTCCGGTTCGTAAGCAGGTTCAAAGGTGTTGTGTAGATGAGACAGTATTCATCACAACATACGAGGGAAATCATAATCATTCACTTCCACCAGCAGCCAGGTTGACAGCAAGCACAACATCAGCAGCATTGAGTATGTTACTTTCTGGTTCAACTACTAGTTCACATGGAAGCACCACTTTCTCAAATGCAAACCTCTTCTCCTCCTCCTCATCTAGTATTTCCTCAAACTCCACTGGCTTGTCTGATTTCTATTCATCTGCATCATCACGTCCGACTATAACATTGGACTTAACCCAACCCTCTAATAACTTCTTCAAATTCCAAATGCCAATTTCTTCAAACCACTACCAACCGTTTCCTGTTTCCTGTTTCCTGTTACCCTCAACAGTCTGA
Protein sequence

>Msa1219390

MEGKVALQKLVQVDERIYDKNSVGIGCSGLSLSLNSNSEELPMNNQDQPIPQLELGWLETKVEEVKRENQILRSMLNQVTQHYALLQNKFLVETMQQQNQQSPSPNKINKQIIMEDDRASELASCRKARVSIRARSDFSLMSDGCRWRKYGQKISKANPYCPRAYYRCNMGLGTTPCPVRKQVQRCCVDETVFITTYEGNHNHSLPPAARLTASTTSAALSMLLSGSTTSSHGSTTFSNANLFSSSSSSISSNSTGLSDFYSSASSRPTITLDLTQPSNNFFKFQMPISSNHYQPFPVSCFLLPSTV*