AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1386370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386370 MtrunA17_Chr2g0302391 38.515 431 166 16 1 354 1 409 7.07e-75 237
Msa1386370 MtrunA17_Chr7g0270831 38.872 337 141 11 52 353 94 400 5.53e-54 183
Msa1386370 MtrunA17_Chr3g0099641 45.267 243 103 9 116 353 226 443 4.08e-53 182
Msa1386370 MtrunA17_Chr2g0322391 47.737 243 97 12 123 353 330 554 3.18e-51 179
Msa1386370 MtrunA17_Chr4g0025051 53.143 175 67 5 123 293 316 479 1.31e-45 164
Msa1386370 MtrunA17_Chr4g0075201 39.568 278 98 6 58 276 124 390 3.09e-45 161
Msa1386370 MtrunA17_Chr2g0288871 45.390 282 110 12 101 353 262 528 1.66e-43 157
Msa1386370 MtrunA17_Chr4g0025061 49.711 173 64 6 124 288 342 499 1.85e-41 153
Msa1386370 MtrunA17_Chr4g0024391 41.736 242 117 8 123 353 210 438 7.56e-40 147
Msa1386370 MtrunA17_Chr4g0060271 50.256 195 80 6 86 274 206 389 1.95e-34 133
Msa1386370 MtrunA17_Chr7g0216891 45.833 192 81 7 111 298 188 360 4.51e-34 132
Msa1386370 MtrunA17_Chr4g0051181 56.800 125 47 3 126 247 227 347 2.49e-33 129
Msa1386370 MtrunA17_Chr5g0418191 36.601 153 87 4 93 241 271 417 9.66e-23 98.6
Msa1386370 MtrunA17_Chr5g0418191 35.294 119 68 5 143 259 152 263 8.06e-11 63.2
Msa1386370 MtrunA17_Chr5g0432161 51.087 92 37 4 124 214 403 487 1.15e-21 96.3
Msa1386370 MtrunA17_Chr4g0042831 51.807 83 33 3 127 208 263 339 1.84e-21 94.4
Msa1386370 MtrunA17_Chr3g0101131 41.593 113 59 3 97 208 370 476 4.92e-21 94.4
Msa1386370 MtrunA17_Chr7g0218081 44.681 94 46 3 127 220 395 482 5.97e-21 94.0
Msa1386370 MtrunA17_Chr5g0419241 64.912 57 19 1 117 173 52 107 6.66e-21 86.7
Msa1386370 MtrunA17_Chr5g0445311 36.810 163 83 6 126 284 348 494 7.31e-21 93.6
Msa1386370 MtrunA17_Chr3g0106491 50.000 84 35 3 124 206 347 424 2.14e-20 92.0
Msa1386370 MtrunA17_Chr4g0051881 46.226 106 51 3 129 234 165 264 4.16e-20 90.1
Msa1386370 MtrunA17_Chr3g0079691 45.000 100 45 4 124 219 477 570 8.45e-20 90.9
Msa1386370 MtrunA17_Chr7g0270191 38.261 115 63 3 106 220 112 218 1.04e-19 88.2
Msa1386370 MtrunA17_Chr3g0136961 28.745 247 126 8 27 249 5 225 2.07e-19 87.4
Msa1386370 MtrunA17_Chr4g0001361 42.000 100 52 4 118 215 136 231 2.59e-19 87.4
Msa1386370 MtrunA17_Chr1g0194481 37.795 127 69 4 84 210 105 221 4.25e-19 87.0
Msa1386370 MtrunA17_Chr7g0243891 46.875 96 43 4 119 213 351 439 4.89e-19 88.2
Msa1386370 MtrunA17_Chr7g0249311 42.424 99 51 3 124 222 374 466 6.13e-19 88.2
Msa1386370 MtrunA17_Chr7g0263531 49.351 77 34 2 130 206 349 420 6.61e-19 87.4
Msa1386370 MtrunA17_Chr7g0263531 42.500 80 38 4 143 221 190 262 2.21e-11 64.7
Msa1386370 MtrunA17_Chr7g0249301 45.882 85 41 2 124 208 274 353 1.25e-18 86.3
Msa1386370 MtrunA17_Chr7g0249301 34.507 142 81 5 141 276 61 196 1.73e-12 67.8
Msa1386370 MtrunA17_Chr4g0004911 45.783 83 40 2 124 206 318 395 1.55e-18 86.7
Msa1386370 MtrunA17_Chr4g0068541 44.706 85 42 2 126 210 192 271 2.42e-18 85.5
Msa1386370 MtrunA17_Chr1g0150271 31.959 194 114 9 58 245 12 193 4.40e-18 82.8
Msa1386370 MtrunA17_Chr2g0294231 39.252 107 57 3 126 232 187 285 5.39e-18 84.3
Msa1386370 MtrunA17_Chr5g0447701 42.268 97 50 3 127 223 237 327 8.34e-18 84.0
Msa1386370 MtrunA17_Chr1g0188941 41.000 100 52 3 108 206 17 110 1.25e-17 77.8
Msa1386370 MtrunA17_Chr5g0443131 44.706 85 42 2 129 213 144 223 2.61e-17 81.6
Msa1386370 MtrunA17_Chr2g0333851 34.286 175 80 8 62 206 60 229 2.71e-17 81.6
Msa1386370 MtrunA17_Chr1g0150281 31.285 179 85 6 59 203 23 197 3.70e-17 80.9
Msa1386370 MtrunA17_Chr7g0224801 49.333 75 33 2 131 205 82 151 3.86e-17 78.2
Msa1386370 MtrunA17_Chr3g0129361 41.414 99 51 3 126 224 128 219 1.07e-16 78.2
Msa1386370 MtrunA17_Chr1g0150801 46.753 77 36 2 127 203 87 158 1.63e-16 76.3
Msa1386370 MtrunA17_Chr8g0379461 50.617 81 30 3 142 222 76 146 2.10e-16 77.8
Msa1386370 MtrunA17_Chr2g0284321 53.030 66 27 2 142 207 35 96 3.83e-16 76.6
Msa1386370 MtrunA17_Chr4g0074001 43.210 81 41 2 126 206 343 418 7.05e-16 78.6
Msa1386370 MtrunA17_Chr8g0335811 48.101 79 36 2 126 204 138 211 7.81e-16 75.9
Msa1386370 MtrunA17_Chr5g0418781 46.154 78 37 2 126 203 108 180 7.93e-16 76.6
Msa1386370 MtrunA17_Chr2g0319961 51.351 74 32 2 133 206 71 140 9.03e-16 76.3
Msa1386370 MtrunA17_Chr8g0386241 42.169 83 43 2 127 209 88 165 1.25e-15 74.3
Msa1386370 MtrunA17_Chr3g0129321 46.154 78 37 2 129 206 105 177 1.64e-15 74.3
Msa1386370 MtrunA17_Chr8g0383251 42.308 78 40 2 129 206 95 167 7.51e-15 72.0
Msa1386370 MtrunA17_Chr1g0147881 43.750 80 41 2 126 205 246 321 1.13e-14 74.3
Msa1386370 MtrunA17_Chr7g0248721 43.182 88 41 3 129 216 128 206 1.31e-14 72.0
Msa1386370 MtrunA17_Chr2g0289181 42.308 78 41 2 140 217 12 85 1.80e-14 72.0
Msa1386370 MtrunA17_Chr6g0485431 44.872 78 39 1 129 206 141 214 2.83e-14 73.2
Msa1386370 MtrunA17_Chr4g0053281 50.000 66 29 2 143 208 267 328 2.93e-14 72.8
Msa1386370 MtrunA17_Chr5g0401821 43.750 80 41 2 126 205 183 258 8.11e-14 70.9
Msa1386370 MtrunA17_Chr7g0270051 42.000 100 45 4 126 219 31 123 8.72e-14 70.5
Msa1386370 MtrunA17_Chr8g0383351 42.553 94 46 4 126 218 143 229 9.30e-14 70.1
Msa1386370 MtrunA17_Chr1g0184691 49.231 65 29 2 143 207 294 354 1.16e-13 71.2
Msa1386370 MtrunA17_Chr4g0069481 79.245 53 6 2 75 122 1 53 1.41e-13 65.5
Msa1386370 MtrunA17_Chr1g0202461 37.615 109 58 4 98 206 223 321 4.26e-13 69.7
Msa1386370 MtrunA17_Chr1g0189391 36.458 96 48 2 118 204 64 155 5.15e-13 69.3
Msa1386370 MtrunA17_Chr4g0071521 47.692 65 30 2 140 204 243 303 1.93e-12 67.4
Msa1386370 MtrunA17_Chr8g0387501 45.455 66 32 2 141 206 128 189 4.46e-12 65.9
Msa1386370 MtrunA17_Chr7g0228941 31.897 116 66 5 90 203 5 109 2.68e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386370 AT4G04450.2 56.875 160 60 4 117 276 173 323 5.45e-51 176
Msa1386370 AT4G04450.1 56.875 160 60 4 117 276 267 417 4.20e-50 175
Msa1386370 AT1G62300.1 54.118 170 67 6 107 276 278 436 1.43e-42 155
Msa1386370 AT5G15130.1 48.469 196 71 7 116 297 201 380 1.29e-38 144
Msa1386370 AT5G15130.2 48.469 196 71 7 116 297 159 338 1.80e-38 144
Msa1386370 AT4G22070.4 56.522 161 56 4 117 275 272 420 3.19e-38 143
Msa1386370 AT4G22070.3 56.522 161 56 4 117 275 272 420 3.19e-38 143
Msa1386370 AT4G22070.2 56.522 161 56 4 117 275 272 420 3.19e-38 143
Msa1386370 AT4G22070.1 56.522 161 56 4 117 275 272 420 3.19e-38 143
Msa1386370 AT4G01720.1 33.248 391 182 12 25 351 68 443 3.79e-37 140
Msa1386370 AT1G68150.1 59.633 109 40 2 126 234 219 323 3.37e-36 135
Msa1386370 AT1G18860.1 52.318 151 67 3 125 275 222 367 1.22e-31 125
Msa1386370 AT1G69810.1 45.614 171 73 6 109 278 173 324 2.86e-30 119
Msa1386370 AT1G69810.2 45.614 171 73 6 109 278 115 266 3.21e-30 118
Msa1386370 AT2G03340.1 41.525 118 61 4 97 213 370 480 3.93e-24 103
Msa1386370 AT1G13960.1 41.228 114 59 4 95 206 361 468 7.46e-23 99.8
Msa1386370 AT1G13960.2 41.228 114 59 4 95 206 208 315 9.15e-23 98.2
Msa1386370 AT2G38470.1 47.917 96 44 3 124 219 344 433 6.77e-22 97.1
Msa1386370 AT4G18170.1 43.636 110 48 3 110 210 131 235 2.88e-21 93.2
Msa1386370 AT1G29860.1 47.191 89 42 2 126 214 120 203 7.92e-21 91.3
Msa1386370 AT2G04880.2 44.944 89 44 2 124 212 265 348 1.14e-20 93.2
Msa1386370 AT2G04880.1 44.944 89 44 2 124 212 289 372 1.27e-20 93.2
Msa1386370 AT5G07100.2 41.667 108 53 3 115 217 114 216 4.38e-20 87.8
Msa1386370 AT5G07100.4 41.667 108 53 3 115 217 114 216 4.38e-20 87.8
Msa1386370 AT5G07100.5 41.667 108 53 3 115 217 114 216 4.38e-20 87.8
Msa1386370 AT5G07100.3 41.667 108 53 3 115 217 114 216 4.38e-20 87.8
Msa1386370 AT5G07100.1 42.453 106 51 3 115 215 207 307 8.56e-20 89.0
Msa1386370 AT5G56270.1 51.136 88 35 4 124 210 469 549 9.14e-20 91.3
Msa1386370 AT3G01080.2 49.383 81 34 3 127 206 329 403 1.01e-19 90.5
Msa1386370 AT3G01080.1 50.633 79 32 3 129 206 293 365 1.27e-19 89.7
Msa1386370 AT5G13080.1 50.649 77 33 2 129 205 54 125 1.69e-19 84.3
Msa1386370 AT5G46350.1 38.849 139 56 5 129 253 170 293 1.73e-19 88.6
Msa1386370 AT2G25000.2 37.143 175 77 9 58 209 2 166 1.76e-19 86.7
Msa1386370 AT2G25000.4 37.143 175 77 9 58 209 2 166 1.76e-19 86.7
Msa1386370 AT2G25000.3 37.143 175 77 9 58 209 24 188 2.52e-19 86.7
Msa1386370 AT5G49520.1 42.342 111 50 4 126 236 205 301 2.68e-19 88.6
Msa1386370 AT2G25000.1 37.143 175 77 9 58 209 45 209 3.33e-19 86.7
Msa1386370 AT2G30250.1 45.977 87 42 2 124 210 310 391 3.64e-19 88.2
Msa1386370 AT5G41570.1 46.316 95 46 2 109 203 65 154 3.68e-19 84.3
Msa1386370 AT4G26640.5 44.706 85 42 2 122 206 185 264 5.39e-19 87.8
Msa1386370 AT4G26640.6 44.706 85 42 2 122 206 185 264 5.39e-19 87.8
Msa1386370 AT4G26640.4 44.706 85 42 2 122 206 185 264 5.39e-19 87.8
Msa1386370 AT4G26640.3 44.706 85 42 2 122 206 185 264 5.39e-19 87.8
Msa1386370 AT4G26640.7 44.706 85 42 2 122 206 321 400 5.42e-19 88.6
Msa1386370 AT4G26640.1 44.706 85 42 2 122 206 289 368 7.38e-19 87.8
Msa1386370 AT4G26640.2 44.706 85 42 2 122 206 361 440 7.49e-19 88.2
Msa1386370 AT5G26170.1 46.753 77 36 2 128 204 99 170 2.06e-18 82.0
Msa1386370 AT4G30935.1 36.154 130 72 4 126 254 315 434 2.82e-18 86.3
Msa1386370 AT4G31800.2 38.843 121 57 5 117 224 73 189 3.90e-18 83.2
Msa1386370 AT4G31800.1 38.843 121 57 5 117 224 138 254 4.61e-18 84.0
Msa1386370 AT1G64000.1 52.000 75 31 2 129 203 101 170 6.99e-18 81.3
Msa1386370 AT2G47260.1 45.882 85 41 2 126 210 158 237 9.38e-18 83.6
Msa1386370 AT2G46130.1 50.667 75 32 2 129 203 17 86 1.56e-17 77.8
Msa1386370 AT3G01970.1 48.718 78 35 2 128 205 51 123 1.81e-17 79.0
Msa1386370 AT4G26440.1 37.762 143 73 6 124 262 354 484 6.53e-17 82.4
Msa1386370 AT1G80840.1 33.146 178 81 8 62 206 34 206 1.19e-16 80.1
Msa1386370 AT1G69310.4 43.956 91 43 3 126 213 131 216 4.46e-16 78.2
Msa1386370 AT1G69310.2 43.956 91 43 3 126 213 131 216 4.46e-16 78.2
Msa1386370 AT1G69310.1 43.956 91 43 3 126 213 131 216 4.46e-16 78.2
Msa1386370 AT2G44745.1 46.154 78 37 2 126 203 129 201 2.12e-15 74.7
Msa1386370 AT2G37260.2 51.389 72 27 3 141 209 266 332 2.44e-15 76.6
Msa1386370 AT2G37260.2 45.679 81 34 5 143 220 84 157 3.92e-11 63.9
Msa1386370 AT2G37260.3 51.389 72 27 3 141 209 268 334 2.45e-15 76.6
Msa1386370 AT2G37260.3 45.679 81 34 5 143 220 86 159 4.00e-11 63.9
Msa1386370 AT2G37260.1 51.389 72 27 3 141 209 348 414 3.41e-15 76.6
Msa1386370 AT2G37260.1 45.679 81 34 5 143 220 166 239 5.82e-11 63.9
Msa1386370 AT1G55600.1 41.176 85 45 2 124 208 289 368 4.09e-15 76.6
Msa1386370 AT2G23320.1 52.381 63 26 2 143 205 241 299 8.35e-15 74.7
Msa1386370 AT5G64810.1 46.667 75 35 2 129 203 97 166 1.30e-14 72.0
Msa1386370 AT4G39410.1 41.053 95 49 3 125 219 206 293 1.30e-14 73.9
Msa1386370 AT4G24240.1 47.674 86 35 4 126 205 259 340 2.13e-14 73.9
Msa1386370 AT3G58710.1 45.122 82 41 2 133 214 62 139 5.05e-14 72.0
Msa1386370 AT3G58710.2 45.122 82 41 2 133 214 61 138 5.13e-14 72.0
Msa1386370 AT2G30590.1 48.571 70 32 2 143 212 314 379 6.43e-14 72.8
Msa1386370 AT4G23550.1 46.341 82 40 2 140 221 138 215 1.47e-13 70.9
Msa1386370 AT5G28650.1 53.448 58 23 2 147 204 267 320 1.83e-13 70.9
Msa1386370 AT3G04670.1 53.448 58 23 2 147 204 267 320 2.73e-13 70.5
Msa1386370 AT2G46130.2 45.333 75 32 2 129 203 17 82 8.01e-13 64.7
Msa1386370 AT2G34830.1 43.373 83 42 3 125 206 197 275 8.81e-13 69.3
Msa1386370 AT2G34830.2 43.373 83 42 3 125 206 206 284 1.07e-12 69.3
Msa1386370 AT2G24570.1 52.632 57 23 2 147 203 248 300 1.17e-12 68.6
Msa1386370 AT4G31550.1 49.180 61 27 2 143 203 247 303 3.20e-12 67.0
Msa1386370 AT4G31550.2 49.180 61 27 2 143 203 246 302 3.39e-12 67.0
Msa1386370 AT1G30650.1 42.169 83 43 3 125 206 199 277 4.20e-12 67.4
Msa1386370 AT1G69310.3 39.560 91 43 3 126 213 131 212 1.19e-11 65.1

Find 86 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACATGTAAGTTTAATTT+TGG 0.143131 tig0020816:-22983 None:intergenic
GCATTGAGTATGTTACTTTC+TGG 0.252753 tig0020816:+22486 Msa1386370:CDS
TGTCTTCTAATGTTTCAATT+AGG 0.256888 tig0020816:+22760 Msa1386370:CDS
GGCCTACTATCGTTGCAATA+TGG 0.277822 tig0020816:+21068 Msa1386370:CDS
TGGTAGTGGTTTGAAGAAAT+TGG 0.304052 tig0020816:-22690 None:intergenic
CTCAGACTGTTGAGGGTAAC+AGG 0.332956 tig0020816:-22727 None:intergenic
AATCAAGGACCCGTCTATTA+AGG 0.334037 tig0020816:+22839 Msa1386370:CDS
GAAATCTGATCTTGCCCTAA+TGG 0.338187 tig0020816:-20809 None:intergenic
AATCAATAAACAAATTATAA+TGG 0.352000 tig0020816:+20738 Msa1386370:CDS
CTTAATTCAGTTGGGGTGGC+TGG 0.357657 tig0020816:+20570 Msa1386370:intron
TAGTAGGCCCGGGGACAGTA+TGG 0.357768 tig0020816:-21054 None:intergenic
GAAAAGCTAGAGTGTCCATT+AGG 0.360477 tig0020816:+20794 Msa1386370:CDS
TCTTCAGAATAAGTTCTTAG+TGG 0.367894 tig0020816:+20672 Msa1386370:CDS
GGGTGTCGATGGAGAAAATA+TGG 0.370995 tig0020816:+21009 Msa1386370:CDS
GCCTACTATCGTTGCAATAT+GGG 0.383038 tig0020816:+21069 Msa1386370:CDS
CTTGCTGTCAACCTGGCTGC+TGG 0.390055 tig0020816:-22450 None:intergenic
TTCACACACAACATCTATAA+AGG 0.401167 tig0020816:-22811 None:intergenic
GAAGAAGTTATTAGAGGGTT+GGG 0.418808 tig0020816:-22655 None:intergenic
GAATTTGAAGAAGTTATTAG+AGG 0.419637 tig0020816:-22661 None:intergenic
GGCTGGTCTTGATTATTCAT+TGG 0.421246 tig0020816:-20383 None:intergenic
TAAGGTAGAGGAGGTGAAGA+GGG 0.428070 tig0020816:+20597 Msa1386370:CDS
CTATCGTTGCAATATGGGAT+TGG 0.438226 tig0020816:+21074 Msa1386370:CDS
TGTTGTGCTTGCTGTCAACC+TGG 0.441414 tig0020816:-22457 None:intergenic
GGTTTGAAGAAATTGGCATT+TGG 0.441998 tig0020816:-22683 None:intergenic
TTACATGTGCAGGTAGGAAT+AGG 0.443212 tig0020816:+20314 Msa1386370:intron
TAGATGAGGAGGAGGAGAAG+AGG 0.450559 tig0020816:-22554 None:intergenic
GAGGTTTGCATTTGAGAAAG+TGG 0.459125 tig0020816:-22535 None:intergenic
GGAAATACTAGATGAGGAGG+AGG 0.461060 tig0020816:-22562 None:intergenic
GGCAAGATCAGATTTCTCAT+TGG 0.466162 tig0020816:+20816 Msa1386370:CDS
CTAAGGTAGAGGAGGTGAAG+AGG 0.466462 tig0020816:+20596 Msa1386370:CDS
TGAAGAAGTTATTAGAGGGT+TGG 0.467313 tig0020816:-22656 None:intergenic
AAAAGCTAGAGTGTCCATTA+GGG 0.467374 tig0020816:+20795 Msa1386370:CDS
TATCGTTGCAATATGGGATT+GGG 0.468985 tig0020816:+21075 Msa1386370:CDS
ACCATGTCCGGTTCGTAAGC+AGG 0.472193 tig0020816:+21104 Msa1386370:CDS
TGTTGAGGGTAACAGGAAAC+AGG 0.477530 tig0020816:-22720 None:intergenic
TCCCATATTGCAACGATAGT+AGG 0.480944 tig0020816:-21070 None:intergenic
ATTGGGAACAACACCATGTC+CGG 0.484093 tig0020816:+21092 Msa1386370:CDS
GTTGGGGTGGCTGGAAACTA+AGG 0.485627 tig0020816:+20579 Msa1386370:intron
ATCACGTCCGACTATAACAT+TGG 0.489630 tig0020816:+22626 Msa1386370:CDS
TATTAGGTGATGGAGATTGT+TGG 0.491707 tig0020816:-20714 None:intergenic
AGACAAGCCAGTGGAGTTTG+AGG 0.493276 tig0020816:-22583 None:intergenic
ATTATATCAGTCTGTAATGC+AGG 0.494280 tig0020816:+23045 Msa1386370:three_prime_UTR
TATTGCAACGATAGTAGGCC+CGG 0.496234 tig0020816:-21065 None:intergenic
TGAGGAAATACTAGATGAGG+AGG 0.496702 tig0020816:-22565 None:intergenic
ATGAGATTACTTCGAGTTGA+GGG 0.498634 tig0020816:-20409 None:intergenic
ATTACTACCTGCTTACGAAC+CGG 0.503938 tig0020816:-21111 None:intergenic
AGGCTAACCCATACTGTCCC+CGG 0.504032 tig0020816:+21046 Msa1386370:CDS
CTTCGAGTTGAGGGATAGGC+TGG 0.505114 tig0020816:-20400 None:intergenic
GCTGTCAACCTGGCTGCTGG+TGG 0.515071 tig0020816:-22447 None:intergenic
AAACAGGAAACGGTTGGTAG+TGG 0.516044 tig0020816:-22704 None:intergenic
TCTAATGCTGCCTTAATAGA+CGG 0.523614 tig0020816:-22849 None:intergenic
AGTATTTCCTCAAACTCCAC+TGG 0.528040 tig0020816:+22576 Msa1386370:CDS
ACAATCCCTCAGACTGTTGA+GGG 0.532754 tig0020816:-22734 None:intergenic
CTGTTACCCTCAACAGTCTG+AGG 0.534144 tig0020816:+22728 Msa1386370:CDS
ACCTGCTTACGAACCGGACA+TGG 0.541309 tig0020816:-21105 None:intergenic
CTAATGCTGCCTTAATAGAC+GGG 0.542838 tig0020816:-22848 None:intergenic
TGCATCATAAACAGGTTCAA+AGG 0.552379 tig0020816:+22364 Msa1386370:intron
GTTTGAGGAAATACTAGATG+AGG 0.556342 tig0020816:-22568 None:intergenic
ATTCACTTCCACCAGCAGCC+AGG 0.556535 tig0020816:+22439 Msa1386370:CDS
ATTACTTCGAGTTGAGGGAT+AGG 0.558574 tig0020816:-20404 None:intergenic
AACTAGTACAAGTTGATGAA+AGG 0.566203 tig0020816:+20179 Msa1386370:CDS
GATTGTGATCAGATGAGTGA+TGG 0.566947 tig0020816:+20988 Msa1386370:intron
AATTTGAAGAAGTTATTAGA+GGG 0.567700 tig0020816:-22660 None:intergenic
GGCTAACCCATACTGTCCCC+GGG 0.570884 tig0020816:+21047 Msa1386370:CDS
TATGAGATTACTTCGAGTTG+AGG 0.576850 tig0020816:-20410 None:intergenic
TGTTACCCTCAACAGTCTGA+GGG 0.580147 tig0020816:+22729 Msa1386370:CDS
AGATGAGTGATGGGTGTCGA+TGG 0.590232 tig0020816:+20998 Msa1386370:intron
GTTAAGTCCAATGTTATAGT+CGG 0.590914 tig0020816:-22633 None:intergenic
GTGGCTGGAAACTAAGGTAG+AGG 0.593444 tig0020816:+20585 Msa1386370:CDS
TGGACTTAATTCAGTTGGGG+TGG 0.600038 tig0020816:+20566 Msa1386370:intron
ATTGTGATCAGATGAGTGAT+GGG 0.602207 tig0020816:+20989 Msa1386370:intron
ATTGCAACGATAGTAGGCCC+GGG 0.603252 tig0020816:-21064 None:intergenic
CACAATCCCTCAGACTGTTG+AGG 0.603844 tig0020816:-22735 None:intergenic
CAGGTAGGAATAGGATGTAG+TGG 0.612215 tig0020816:+20323 Msa1386370:intron
ATATGGACAAAAGATATCAA+AGG 0.627500 tig0020816:+21026 Msa1386370:CDS
GGTTCAACTACTAGTTCACA+TGG 0.632921 tig0020816:+22507 Msa1386370:CDS
ACACAACATCTATAAAGGCA+AGG 0.647254 tig0020816:-22806 None:intergenic
AACAGGAAACAGGAAACGGT+TGG 0.650438 tig0020816:-22710 None:intergenic
GCTGGAAACTAAGGTAGAGG+AGG 0.650640 tig0020816:+20588 Msa1386370:CDS
TGTGTGTGAAGCTATAATCA+AGG 0.652059 tig0020816:+22824 Msa1386370:CDS
GGGTAACAGGAAACAGGAAA+CGG 0.658774 tig0020816:-22714 None:intergenic
AGTATTCATCACAACATACG+AGG 0.673709 tig0020816:+22404 Msa1386370:CDS
TTATCTATGCTACATGACTG+AGG 0.677038 tig0020816:-22906 None:intergenic
ATAGAAATCAGACAAGCCAG+TGG 0.705257 tig0020816:-22592 None:intergenic
TTGCAACGATAGTAGGCCCG+GGG 0.707550 tig0020816:-21063 None:intergenic
GTATTCATCACAACATACGA+GGG 0.732692 tig0020816:+22405 Msa1386370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+TGG - tig0020816:20510-20529 None:intergenic 0.0%
!! AAATATACTAATTAATTACA+TGG - tig0020816:20239-20258 None:intergenic 10.0%
!!! CTTTTGAATAATAATTTATA+GGG + tig0020816:20288-20307 Msa1386370:intron 10.0%
!!! TTTTGAATAATAATTTATAG+GGG + tig0020816:20289-20308 Msa1386370:intron 10.0%
!!! ATATATTTTTTTTTTATGAG+TGG + tig0020816:20546-20565 Msa1386370:intron 10.0%
!!! ATTTGTTTATTGATTTTATT+AGG - tig0020816:20733-20752 None:intergenic 10.0%
!! AATCAATAAACAAATTATAA+TGG + tig0020816:20738-20757 Msa1386370:CDS 10.0%
!! CATAAAATAATATATATAGA+TGG - tig0020816:20939-20958 None:intergenic 10.0%
!! CAATAATCAATATACTAATT+AGG - tig0020816:20268-20287 None:intergenic 15.0%
!!! GCTTTTGAATAATAATTTAT+AGG + tig0020816:20287-20306 Msa1386370:intron 15.0%
!! AAAAATCATTATCATGTATT+GGG - tig0020816:21322-21341 None:intergenic 15.0%
!! AAAAAATCATTATCATGTAT+TGG - tig0020816:21323-21342 None:intergenic 15.0%
!! ATACTAATTAATTACATGGA+TGG - tig0020816:20235-20254 None:intergenic 20.0%
!! ACTTAAACTGATACATATAT+AGG + tig0020816:20433-20452 Msa1386370:intron 20.0%
!!! TTATTGATTTTATTAGGTGA+TGG - tig0020816:20727-20746 None:intergenic 20.0%
!! ATTGAAATATGTATAGTAAG+TGG - tig0020816:20854-20873 None:intergenic 20.0%
!! CAATCAAATTACTTAATTAG+CGG - tig0020816:20973-20992 None:intergenic 20.0%
!!! TTGATTTGCTTCAAAATTAA+AGG - tig0020816:21183-21202 None:intergenic 20.0%
!! AAAATCATTATCATGTATTG+GGG - tig0020816:21321-21340 None:intergenic 20.0%
!! GAATAACTAATAAATAACCT+AGG - tig0020816:21420-21439 None:intergenic 20.0%
!! TCTTGTTAAAGATTTCTAAA+TGG + tig0020816:21744-21763 Msa1386370:intron 20.0%
!! CTTGTTAAAGATTTCTAAAT+GGG + tig0020816:21745-21764 Msa1386370:intron 20.0%
!! CTACTAAATTAGAAAACTTA+TGG - tig0020816:21915-21934 None:intergenic 20.0%
!!! CATAAGTTTTCTAATTTAGT+AGG + tig0020816:21913-21932 Msa1386370:intron 20.0%
!! AATTTGAAGAAGTTATTAGA+GGG - tig0020816:22663-22682 None:intergenic 20.0%
!!! CAAACATGTAAGTTTAATTT+TGG - tig0020816:22986-23005 None:intergenic 20.0%
! ATATGGACAAAAGATATCAA+AGG + tig0020816:21026-21045 Msa1386370:CDS 25.0%
!!! GGTAGTAATTCTTTAATTTG+TGG + tig0020816:21125-21144 Msa1386370:intron 25.0%
! CGTTTACTATGAATGTAAAA+TGG - tig0020816:21292-21311 None:intergenic 25.0%
! AAGACCAATAACAAATATTG+CGG - tig0020816:21649-21668 None:intergenic 25.0%
!!! TTTGTTATTGGTCTTCTTTT+CGG + tig0020816:21654-21673 Msa1386370:intron 25.0%
! ATAAATAAAATGGAGACATG+TGG - tig0020816:21851-21870 None:intergenic 25.0%
!!! TCTCCATTTTATTTATCGTT+TGG + tig0020816:21855-21874 Msa1386370:intron 25.0%
! AGTCCAAACGATAAATAAAA+TGG - tig0020816:21861-21880 None:intergenic 25.0%
! TTTCTAATTTAGTAGGATAG+TGG + tig0020816:21920-21939 Msa1386370:intron 25.0%
! TCAACTATCTATTCTACAAT+AGG - tig0020816:21950-21969 None:intergenic 25.0%
! TACTACTACAAAAGTAGTAT+TGG + tig0020816:22227-22246 Msa1386370:intron 25.0%
! GAATTTGAAGAAGTTATTAG+AGG - tig0020816:22664-22683 None:intergenic 25.0%
! TGTCTTCTAATGTTTCAATT+AGG + tig0020816:22760-22779 Msa1386370:CDS 25.0%
ATTGTTGCTACAAAAATGGA+AGG + tig0020816:20139-20158 Msa1386370:exon 30.0%
TTGTTGCTACAAAAATGGAA+GGG + tig0020816:20140-20159 Msa1386370:exon 30.0%
!! AACTAGTACAAGTTGATGAA+AGG + tig0020816:20179-20198 Msa1386370:CDS 30.0%
TCTTCAGAATAAGTTCTTAG+TGG + tig0020816:20672-20691 Msa1386370:CDS 30.0%
TTGCTTCAAAATTAAAGGTG+TGG - tig0020816:21178-21197 None:intergenic 30.0%
AATCCATATTTGAGCAACTA+TGG - tig0020816:21524-21543 None:intergenic 30.0%
AGTAGTATTAGAGTTGCATT+CGG - tig0020816:22027-22046 None:intergenic 30.0%
AGTACTAGTGAAATGTTTAG+TGG + tig0020816:22069-22088 Msa1386370:intron 30.0%
ACAATAAGTTAATCACTACC+CGG - tig0020816:22112-22131 None:intergenic 30.0%
GGTAGTGATTAACTTATTGT+CGG + tig0020816:22112-22131 Msa1386370:intron 30.0%
TGAAATGTTAGTAACGTTGA+GGG - tig0020816:22161-22180 None:intergenic 30.0%
ATGAAATGTTAGTAACGTTG+AGG - tig0020816:22162-22181 None:intergenic 30.0%
TACAAATGTGCATCATAAAC+AGG + tig0020816:22356-22375 Msa1386370:intron 30.0%
GTTAAGTCCAATGTTATAGT+CGG - tig0020816:22636-22655 None:intergenic 30.0%
TTCACACACAACATCTATAA+AGG - tig0020816:22814-22833 None:intergenic 30.0%
ATTATATCAGTCTGTAATGC+AGG + tig0020816:23045-23064 Msa1386370:three_prime_UTR 30.0%
!! ATGAGATTACTTCGAGTTGA+GGG - tig0020816:20412-20431 None:intergenic 35.0%
!! TATGAGATTACTTCGAGTTG+AGG - tig0020816:20413-20432 None:intergenic 35.0%
! ATGAGTGGACTTAATTCAGT+TGG + tig0020816:20561-20580 Msa1386370:intron 35.0%
! TGAGTGGACTTAATTCAGTT+GGG + tig0020816:20562-20581 Msa1386370:intron 35.0%
!! TATTAGGTGATGGAGATTGT+TGG - tig0020816:20717-20736 None:intergenic 35.0%
! AAAAGCTAGAGTGTCCATTA+GGG + tig0020816:20795-20814 Msa1386370:CDS 35.0%
ATTGTGATCAGATGAGTGAT+GGG + tig0020816:20989-21008 Msa1386370:intron 35.0%
TATCGTTGCAATATGGGATT+GGG + tig0020816:21075-21094 Msa1386370:CDS 35.0%
!!! AGTATCGAAGGTTTTGAAGT+GGG - tig0020816:21242-21261 None:intergenic 35.0%
!!! TAGTATCGAAGGTTTTGAAG+TGG - tig0020816:21243-21262 None:intergenic 35.0%
AGTCCATAGTTGCTCAAATA+TGG + tig0020816:21518-21537 Msa1386370:intron 35.0%
! GTACCTTAGAGTATCAATGT+TGG - tig0020816:21563-21582 None:intergenic 35.0%
AACGTACATAAACATCAAGG+TGG - tig0020816:21613-21632 None:intergenic 35.0%
GACAACGTACATAAACATCA+AGG - tig0020816:21616-21635 None:intergenic 35.0%
ATAACAAATATTGCGGCAAG+AGG - tig0020816:21642-21661 None:intergenic 35.0%
!! CTTGCCGCAATATTTGTTAT+TGG + tig0020816:21642-21661 Msa1386370:intron 35.0%
TGCATCATAAACAGGTTCAA+AGG + tig0020816:22364-22383 Msa1386370:intron 35.0%
AGTATTCATCACAACATACG+AGG + tig0020816:22404-22423 Msa1386370:CDS 35.0%
GTATTCATCACAACATACGA+GGG + tig0020816:22405-22424 Msa1386370:CDS 35.0%
!! GCATTGAGTATGTTACTTTC+TGG + tig0020816:22486-22505 Msa1386370:CDS 35.0%
GTTTGAGGAAATACTAGATG+AGG - tig0020816:22571-22590 None:intergenic 35.0%
GAAGAAGTTATTAGAGGGTT+GGG - tig0020816:22658-22677 None:intergenic 35.0%
TGAAGAAGTTATTAGAGGGT+TGG - tig0020816:22659-22678 None:intergenic 35.0%
GGTTTGAAGAAATTGGCATT+TGG - tig0020816:22686-22705 None:intergenic 35.0%
!! TGGTAGTGGTTTGAAGAAAT+TGG - tig0020816:22693-22712 None:intergenic 35.0%
! AGGTTTTTCTTTGAGTCTGA+GGG - tig0020816:22789-22808 None:intergenic 35.0%
! AAGGTTTTTCTTTGAGTCTG+AGG - tig0020816:22790-22809 None:intergenic 35.0%
ACACAACATCTATAAAGGCA+AGG - tig0020816:22809-22828 None:intergenic 35.0%
TGTGTGTGAAGCTATAATCA+AGG + tig0020816:22824-22843 Msa1386370:CDS 35.0%
TCTAATGCTGCCTTAATAGA+CGG - tig0020816:22852-22871 None:intergenic 35.0%
TTATCTATGCTACATGACTG+AGG - tig0020816:22909-22928 None:intergenic 35.0%
TATAGGGGAATTACATGTGC+AGG + tig0020816:20304-20323 Msa1386370:intron 40.0%
TTACATGTGCAGGTAGGAAT+AGG + tig0020816:20314-20333 Msa1386370:intron 40.0%
!! GGCTGGTCTTGATTATTCAT+TGG - tig0020816:20386-20405 None:intergenic 40.0%
!! ATTACTTCGAGTTGAGGGAT+AGG - tig0020816:20407-20426 None:intergenic 40.0%
GCTTAACTTTGAACTGATGC+TGG + tig0020816:20483-20502 Msa1386370:intron 40.0%
! GAGTGGACTTAATTCAGTTG+GGG + tig0020816:20563-20582 Msa1386370:intron 40.0%
! GAAAAGCTAGAGTGTCCATT+AGG + tig0020816:20794-20813 Msa1386370:CDS 40.0%
GAAATCTGATCTTGCCCTAA+TGG - tig0020816:20812-20831 None:intergenic 40.0%
GGCAAGATCAGATTTCTCAT+TGG + tig0020816:20816-20835 Msa1386370:CDS 40.0%
GATTGTGATCAGATGAGTGA+TGG + tig0020816:20988-21007 Msa1386370:intron 40.0%
GCCTACTATCGTTGCAATAT+GGG + tig0020816:21069-21088 Msa1386370:CDS 40.0%
TCCCATATTGCAACGATAGT+AGG - tig0020816:21073-21092 None:intergenic 40.0%
CTATCGTTGCAATATGGGAT+TGG + tig0020816:21074-21093 Msa1386370:CDS 40.0%
ATTACTACCTGCTTACGAAC+CGG - tig0020816:21114-21133 None:intergenic 40.0%
!!! TATCGAAGGTTTTGAAGTGG+GGG - tig0020816:21240-21259 None:intergenic 40.0%
!!! GTATCGAAGGTTTTGAAGTG+GGG - tig0020816:21241-21260 None:intergenic 40.0%
! AGTGATGCAAGTAGTATCGA+AGG - tig0020816:21254-21273 None:intergenic 40.0%
AAATGTGTTTGCGAGAGAGA+GGG - tig0020816:21367-21386 None:intergenic 40.0%
TAAATGTGTTTGCGAGAGAG+AGG - tig0020816:21368-21387 None:intergenic 40.0%
! CCTTAGAGTATCAATGTTGG+AGG - tig0020816:21560-21579 None:intergenic 40.0%
CCTCCAACATTGATACTCTA+AGG + tig0020816:21557-21576 Msa1386370:intron 40.0%
GTACATAAACATCAAGGTGG+AGG - tig0020816:21610-21629 None:intergenic 40.0%
CTTTAACAAGACCGACAAGA+GGG - tig0020816:21735-21754 None:intergenic 40.0%
TCTTTAACAAGACCGACAAG+AGG - tig0020816:21736-21755 None:intergenic 40.0%
TTGCATGTGAATCTCCTTGT+TGG + tig0020816:21786-21805 Msa1386370:intron 40.0%
TGTAGTTTAAGGAGCAAGAG+TGG - tig0020816:21824-21843 None:intergenic 40.0%
CTCTTGCTCCTTAAACTACA+AGG + tig0020816:21824-21843 Msa1386370:intron 40.0%
CATGTGGTCCTTGTAGTTTA+AGG - tig0020816:21835-21854 None:intergenic 40.0%
GTTGCATTCGGTCATACAAT+AGG - tig0020816:22015-22034 None:intergenic 40.0%
GGTTCAACTACTAGTTCACA+TGG + tig0020816:22507-22526 Msa1386370:CDS 40.0%
GAGGTTTGCATTTGAGAAAG+TGG - tig0020816:22538-22557 None:intergenic 40.0%
TGAGGAAATACTAGATGAGG+AGG - tig0020816:22568-22587 None:intergenic 40.0%
AGTATTTCCTCAAACTCCAC+TGG + tig0020816:22576-22595 Msa1386370:CDS 40.0%
ATAGAAATCAGACAAGCCAG+TGG - tig0020816:22595-22614 None:intergenic 40.0%
ATCACGTCCGACTATAACAT+TGG + tig0020816:22626-22645 Msa1386370:CDS 40.0%
AATCAAGGACCCGTCTATTA+AGG + tig0020816:22839-22858 Msa1386370:CDS 40.0%
CTAATGCTGCCTTAATAGAC+GGG - tig0020816:22851-22870 None:intergenic 40.0%
CAGGTAGGAATAGGATGTAG+TGG + tig0020816:20323-20342 Msa1386370:intron 45.0%
TGGACTTAATTCAGTTGGGG+TGG + tig0020816:20566-20585 Msa1386370:intron 45.0%
TAAGGTAGAGGAGGTGAAGA+GGG + tig0020816:20597-20616 Msa1386370:CDS 45.0%
!! GGGTGTCGATGGAGAAAATA+TGG + tig0020816:21009-21028 Msa1386370:CDS 45.0%
TATTGCAACGATAGTAGGCC+CGG - tig0020816:21068-21087 None:intergenic 45.0%
GGCCTACTATCGTTGCAATA+TGG + tig0020816:21068-21087 Msa1386370:CDS 45.0%
ATTGGGAACAACACCATGTC+CGG + tig0020816:21092-21111 Msa1386370:CDS 45.0%
!!! ATCGAAGGTTTTGAAGTGGG+GGG - tig0020816:21239-21258 None:intergenic 45.0%
CTTGTGTGAATTGATCGCCT+AGG + tig0020816:21400-21419 Msa1386370:intron 45.0%
! GAGCAACTATGGACTACACT+TGG - tig0020816:21513-21532 None:intergenic 45.0%
!! TTCGGCCTTGTTGAAGACTT+CGG + tig0020816:21672-21691 Msa1386370:intron 45.0%
GCGCATCTAAAGAACGAGAA+TGG - tig0020816:21705-21724 None:intergenic 45.0%
TCTCCTTGTTGGTCCTTACA+AGG + tig0020816:21797-21816 Msa1386370:intron 45.0%
GTTTAGTGGCATGAGACAAG+CGG + tig0020816:22083-22102 Msa1386370:intron 45.0%
GGAAATACTAGATGAGGAGG+AGG - tig0020816:22565-22584 None:intergenic 45.0%
!! AAACAGGAAACGGTTGGTAG+TGG - tig0020816:22707-22726 None:intergenic 45.0%
AACAGGAAACAGGAAACGGT+TGG - tig0020816:22713-22732 None:intergenic 45.0%
GGGTAACAGGAAACAGGAAA+CGG - tig0020816:22717-22736 None:intergenic 45.0%
TGTTGAGGGTAACAGGAAAC+AGG - tig0020816:22723-22742 None:intergenic 45.0%
TGTTACCCTCAACAGTCTGA+GGG + tig0020816:22729-22748 Msa1386370:CDS 45.0%
ACAATCCCTCAGACTGTTGA+GGG - tig0020816:22737-22756 None:intergenic 45.0%
GGGGAATTACATGTGCAGGT+AGG + tig0020816:20308-20327 Msa1386370:intron 50.0%
CTTAATTCAGTTGGGGTGGC+TGG + tig0020816:20570-20589 Msa1386370:intron 50.0%
GTGGCTGGAAACTAAGGTAG+AGG + tig0020816:20585-20604 Msa1386370:CDS 50.0%
GCTGGAAACTAAGGTAGAGG+AGG + tig0020816:20588-20607 Msa1386370:CDS 50.0%
CTAAGGTAGAGGAGGTGAAG+AGG + tig0020816:20596-20615 Msa1386370:CDS 50.0%
!! AGATGAGTGATGGGTGTCGA+TGG + tig0020816:20998-21017 Msa1386370:intron 50.0%
ATTGCAACGATAGTAGGCCC+GGG - tig0020816:21067-21086 None:intergenic 50.0%
!!! TCGAAGGTTTTGAAGTGGGG+GGG - tig0020816:21238-21257 None:intergenic 50.0%
!! TCGGCCTTGTTGAAGACTTC+GGG + tig0020816:21673-21692 Msa1386370:intron 50.0%
CATGCCCGAAGTCTTCAACA+AGG - tig0020816:21680-21699 None:intergenic 50.0%
GGTCCTTGTAAGGACCAACA+AGG - tig0020816:21803-21822 None:intergenic 50.0%
GAGCAAGAGTGGTCCTTGTA+AGG - tig0020816:21813-21832 None:intergenic 50.0%
!! TGTTGTGCTTGCTGTCAACC+TGG - tig0020816:22460-22479 None:intergenic 50.0%
TAGATGAGGAGGAGGAGAAG+AGG - tig0020816:22557-22576 None:intergenic 50.0%
AGACAAGCCAGTGGAGTTTG+AGG - tig0020816:22586-22605 None:intergenic 50.0%
CTCAGACTGTTGAGGGTAAC+AGG - tig0020816:22730-22749 None:intergenic 50.0%
CTGTTACCCTCAACAGTCTG+AGG + tig0020816:22728-22747 Msa1386370:CDS 50.0%
CACAATCCCTCAGACTGTTG+AGG - tig0020816:22738-22757 None:intergenic 50.0%
!! CTTCGAGTTGAGGGATAGGC+TGG - tig0020816:20403-20422 None:intergenic 55.0%
GTTGGGGTGGCTGGAAACTA+AGG + tig0020816:20579-20598 Msa1386370:intron 55.0%
AGGCTAACCCATACTGTCCC+CGG + tig0020816:21046-21065 Msa1386370:CDS 55.0%
TTGCAACGATAGTAGGCCCG+GGG - tig0020816:21066-21085 None:intergenic 55.0%
! ACCATGTCCGGTTCGTAAGC+AGG + tig0020816:21104-21123 Msa1386370:CDS 55.0%
ACCTGCTTACGAACCGGACA+TGG - tig0020816:21108-21127 None:intergenic 55.0%
GCGCTTGTGAACCCTCTTGT+CGG + tig0020816:21721-21740 Msa1386370:intron 55.0%
ATTCACTTCCACCAGCAGCC+AGG + tig0020816:22439-22458 Msa1386370:CDS 55.0%
GGCTAACCCATACTGTCCCC+GGG + tig0020816:21047-21066 Msa1386370:CDS 60.0%
AGTAGGCCCGGGGACAGTAT+GGG - tig0020816:21056-21075 None:intergenic 60.0%
TAGTAGGCCCGGGGACAGTA+TGG - tig0020816:21057-21076 None:intergenic 60.0%
GGCATGAGACAAGCGGCAAC+CGG + tig0020816:22090-22109 Msa1386370:intron 60.0%
GCATGAGACAAGCGGCAACC+GGG + tig0020816:22091-22110 Msa1386370:intron 60.0%
! CTTGCTGTCAACCTGGCTGC+TGG - tig0020816:22453-22472 None:intergenic 60.0%
GCTGTCAACCTGGCTGCTGG+TGG - tig0020816:22450-22469 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0020816 gene 20139 23082 20139 ID=Msa1386370;Name=Msa1386370
tig0020816 mRNA 20139 23082 20139 ID=Msa1386370-mRNA-1;Parent=Msa1386370;Name=Msa1386370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=15|1|1|1|1|1|5|186|354
tig0020816 exon 20139 20219 20139 ID=Msa1386370-mRNA-1:exon:10116;Parent=Msa1386370-mRNA-1
tig0020816 exon 20326 20421 20326 ID=Msa1386370-mRNA-1:exon:10117;Parent=Msa1386370-mRNA-1
tig0020816 exon 20580 20837 20580 ID=Msa1386370-mRNA-1:exon:10118;Parent=Msa1386370-mRNA-1
tig0020816 exon 21000 21125 21000 ID=Msa1386370-mRNA-1:exon:10119;Parent=Msa1386370-mRNA-1
tig0020816 exon 22378 23082 22378 ID=Msa1386370-mRNA-1:exon:10120;Parent=Msa1386370-mRNA-1
tig0020816 five_prime_UTR 20139 20153 20139 ID=Msa1386370-mRNA-1:five_prime_utr;Parent=Msa1386370-mRNA-1
tig0020816 CDS 20154 20219 20154 ID=Msa1386370-mRNA-1:cds;Parent=Msa1386370-mRNA-1
tig0020816 CDS 20326 20421 20326 ID=Msa1386370-mRNA-1:cds;Parent=Msa1386370-mRNA-1
tig0020816 CDS 20580 20837 20580 ID=Msa1386370-mRNA-1:cds;Parent=Msa1386370-mRNA-1
tig0020816 CDS 21000 21125 21000 ID=Msa1386370-mRNA-1:cds;Parent=Msa1386370-mRNA-1
tig0020816 CDS 22378 22896 22378 ID=Msa1386370-mRNA-1:cds;Parent=Msa1386370-mRNA-1
tig0020816 three_prime_UTR 22897 23082 22897 ID=Msa1386370-mRNA-1:three_prime_utr;Parent=Msa1386370-mRNA-1
Gene Sequence

>Msa1386370

ATGGAAGGGAAAGTTGCACTGCAAAAACTAGTACAAGTTGATGAAAGGATATATGATAAAAATTCTGTAGGAATAGGATGTAGTGGTCTCAGTTTGAGTCTGAATAGTAATTCAGAAGAGCTTCCAATGAATAATCAAGACCAGCCTATCCCTCAACTCGAATTGGGGTGGCTGGAAACTAAGGTAGAGGAGGTGAAGAGGGAGAATCAGATTTTAAGATCTTTGTTAAATCAAGTAACTCAACACTATGCACTTCTTCAGAATAAGTTCTTAGTGGAGACGATGCAGCAGCAGAACCAACAATCTCCATCACCTAATAAAATCAATAAACAAATTATAATGGAAGATGATCGAGCATCTGAGTTAGCTTCTTGCAGAAAAGCTAGAGTGTCCATTAGGGCAAGATCAGATTTCTCATTGATGAGTGATGGGTGTCGATGGAGAAAATATGGACAAAAGATATCAAAGGCTAACCCATACTGTCCCCGGGCCTACTATCGTTGCAATATGGGATTGGGAACAACACCATGTCCGGTTCGTAAGCAGGTTCAAAGGTGTTGTGTAGATGAGACAGTATTCATCACAACATACGAGGGAAATCATAATCATTCACTTCCACCAGCAGCCAGGTTGACAGCAAGCACAACATCAGCAGCATTGAGTATGTTACTTTCTGGTTCAACTACTAGTTCACATGGAAGCACCACTTTCTCAAATGCAAACCTCTTCTCCTCCTCCTCATCTAGTATTTCCTCAAACTCCACTGGCTTGTCTGATTTCTATTCATCTGCATCATCACGTCCGACTATAACATTGGACTTAACCCAACCCTCTAATAACTTCTTCAAATTCCAAATGCCAATTTCTTCAAACCACTACCAACCGTTTCCTGTTTCCTGTTACCCTCAACAGTCTGAGGGATTGTGTCTGTCTTCTAATGTTTCAATTAGGAAACCCTCAGACTCAAAGAAAAACCTTGCCTTTATAGATGTTGTGTGTGAAGCTATAATCAAGGACCCGTCTATTAAGGCAGCATTAGATGCAGCACTTTCTTCGCTCACTTGA
Protein sequence

>Msa1386370

MEGKVALQKLVQVDERIYDKNSVGIGCSGLSLSLNSNSEELPMNNQDQPIPQLELGWLETKVEEVKRENQILRSLLNQVTQHYALLQNKFLVETMQQQNQQSPSPNKINKQIIMEDDRASELASCRKARVSIRARSDFSLMSDGCRWRKYGQKISKANPYCPRAYYRCNMGLGTTPCPVRKQVQRCCVDETVFITTYEGNHNHSLPPAARLTASTTSAALSMLLSGSTTSSHGSTTFSNANLFSSSSSSISSNSTGLSDFYSSASSRPTITLDLTQPSNNFFKFQMPISSNHYQPFPVSCYPQQSEGLCLSSNVSIRKPSDSKKNLAFIDVVCEAIIKDPSIKAALDAALSSLT*