Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220160 | sp|F4K5J1|MYO17_ARATH | 78.710 | 155 | 21 | 1 | 1 | 155 | 1273 | 1415 | 8.37e-68 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220160 | A0A2K3P2B8 | 87.742 | 155 | 7 | 1 | 1 | 155 | 553 | 695 | 3.53e-85 | 283 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0723210 | Msa1220160 | 0.803891 | 2.807226e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220160 | MtrunA17_Chr4g0070771 | 89.032 | 155 | 5 | 1 | 1 | 155 | 1276 | 1418 | 7.30e-87 | 285 |
| Msa1220160 | MtrunA17_Chr4g0070571 | 58.333 | 192 | 2 | 2 | 154 | 267 | 810 | 1001 | 1.69e-55 | 194 |
| Msa1220160 | MtrunA17_Chr2g0309291 | 57.233 | 159 | 52 | 3 | 1 | 155 | 1318 | 1464 | 1.07e-53 | 189 |
| Msa1220160 | MtrunA17_Chr1g0183001 | 56.129 | 155 | 52 | 2 | 1 | 155 | 1266 | 1404 | 9.67e-52 | 184 |
| Msa1220160 | MtrunA17_Chr7g0262581 | 54.839 | 155 | 54 | 2 | 1 | 155 | 1265 | 1403 | 1.79e-48 | 174 |
| Msa1220160 | MtrunA17_Chr3g0136351 | 51.948 | 154 | 62 | 1 | 2 | 155 | 181 | 322 | 7.87e-47 | 164 |
| Msa1220160 | MtrunA17_Chr2g0300521 | 50.000 | 192 | 18 | 2 | 154 | 267 | 591 | 782 | 1.88e-46 | 167 |
| Msa1220160 | MtrunA17_Chr1g0151061 | 49.032 | 155 | 67 | 1 | 1 | 155 | 1262 | 1404 | 9.90e-42 | 155 |
| Msa1220160 | MtrunA17_Chr7g0274381 | 71.429 | 91 | 14 | 1 | 66 | 156 | 43 | 121 | 6.69e-39 | 137 |
| Msa1220160 | MtrunA17_Chr1g0164261 | 43.506 | 154 | 62 | 3 | 1 | 154 | 56 | 184 | 3.11e-37 | 134 |
| Msa1220160 | MtrunA17_Chr7g0274371 | 77.273 | 66 | 13 | 1 | 1 | 64 | 251 | 316 | 3.68e-23 | 97.8 |
| Msa1220160 | MtrunA17_Chr1g0164241 | 66.667 | 54 | 18 | 0 | 101 | 154 | 4 | 57 | 5.12e-20 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220160 | AT5G20490.3 | 78.710 | 155 | 21 | 1 | 1 | 155 | 1207 | 1349 | 5.99e-69 | 234 |
| Msa1220160 | AT5G20490.1 | 78.710 | 155 | 21 | 1 | 1 | 155 | 1272 | 1414 | 8.51e-69 | 233 |
| Msa1220160 | AT5G20490.2 | 78.710 | 155 | 21 | 1 | 1 | 155 | 1273 | 1415 | 8.51e-69 | 233 |
| Msa1220160 | AT1G54560.1 | 72.611 | 157 | 29 | 2 | 1 | 155 | 1273 | 1417 | 4.54e-68 | 231 |
| Msa1220160 | AT1G54560.2 | 72.611 | 157 | 29 | 2 | 1 | 155 | 1270 | 1414 | 5.24e-68 | 231 |
| Msa1220160 | AT1G08730.2 | 71.338 | 157 | 31 | 2 | 1 | 155 | 1274 | 1418 | 9.53e-66 | 224 |
| Msa1220160 | AT1G08730.1 | 71.338 | 157 | 31 | 2 | 1 | 155 | 1282 | 1426 | 1.07e-65 | 224 |
| Msa1220160 | AT1G17580.1 | 66.456 | 158 | 38 | 2 | 1 | 155 | 1263 | 1408 | 1.03e-61 | 213 |
| Msa1220160 | AT5G43900.2 | 53.846 | 156 | 54 | 4 | 1 | 155 | 1316 | 1454 | 3.02e-47 | 171 |
| Msa1220160 | AT5G43900.1 | 53.846 | 156 | 54 | 4 | 1 | 155 | 1259 | 1397 | 3.06e-47 | 171 |
| Msa1220160 | AT5G43900.3 | 53.846 | 156 | 54 | 4 | 1 | 155 | 1319 | 1457 | 3.27e-47 | 171 |
| Msa1220160 | AT4G28710.1 | 52.258 | 155 | 62 | 1 | 1 | 155 | 1266 | 1408 | 8.44e-47 | 170 |
| Msa1220160 | AT1G04160.1 | 52.903 | 155 | 57 | 3 | 1 | 155 | 1254 | 1392 | 3.12e-46 | 168 |
| Msa1220160 | AT1G04160.2 | 53.247 | 154 | 56 | 3 | 1 | 154 | 1254 | 1391 | 5.72e-46 | 167 |
| Msa1220160 | AT2G31900.3 | 52.532 | 158 | 59 | 3 | 1 | 154 | 1038 | 1183 | 4.69e-44 | 162 |
| Msa1220160 | AT2G31900.5 | 52.532 | 158 | 59 | 3 | 1 | 154 | 1181 | 1326 | 4.85e-44 | 162 |
| Msa1220160 | AT2G31900.4 | 52.532 | 158 | 59 | 3 | 1 | 154 | 1295 | 1440 | 6.32e-44 | 161 |
| Msa1220160 | AT2G31900.1 | 52.532 | 158 | 59 | 3 | 1 | 154 | 1295 | 1440 | 6.32e-44 | 161 |
| Msa1220160 | AT2G31900.2 | 52.532 | 158 | 59 | 3 | 1 | 154 | 1296 | 1441 | 6.44e-44 | 161 |
| Msa1220160 | AT4G33200.3 | 43.902 | 205 | 90 | 5 | 1 | 201 | 1260 | 1443 | 2.45e-40 | 151 |
| Msa1220160 | AT4G33200.1 | 49.677 | 155 | 65 | 2 | 1 | 155 | 1260 | 1401 | 7.37e-39 | 147 |
| Msa1220160 | AT4G33200.4 | 49.677 | 155 | 65 | 2 | 1 | 155 | 1261 | 1402 | 7.44e-39 | 147 |
| Msa1220160 | AT4G33200.2 | 49.677 | 155 | 65 | 2 | 1 | 155 | 1230 | 1371 | 8.71e-39 | 146 |
| Msa1220160 | AT2G20290.2 | 41.954 | 174 | 80 | 2 | 1 | 174 | 1245 | 1397 | 7.33e-37 | 141 |
| Msa1220160 | AT2G20290.3 | 41.954 | 174 | 80 | 2 | 1 | 174 | 1230 | 1382 | 7.82e-37 | 141 |
| Msa1220160 | AT2G20290.1 | 41.954 | 174 | 80 | 2 | 1 | 174 | 1256 | 1408 | 7.92e-37 | 141 |
| Msa1220160 | AT2G20290.4 | 41.954 | 174 | 80 | 2 | 1 | 174 | 1239 | 1391 | 8.61e-37 | 140 |
| Msa1220160 | AT5G35560.1 | 43.750 | 192 | 30 | 2 | 154 | 267 | 552 | 743 | 4.39e-36 | 138 |
| Msa1220160 | AT5G35560.2 | 43.750 | 192 | 30 | 2 | 154 | 267 | 526 | 717 | 5.26e-36 | 138 |
| Msa1220160 | AT1G04600.1 | 43.046 | 151 | 69 | 2 | 24 | 174 | 1509 | 1642 | 5.60e-27 | 112 |
| Msa1220160 | AT2G33240.5 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1041 | 1135 | 1.79e-23 | 102 |
| Msa1220160 | AT2G33240.2 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1544 | 1638 | 2.67e-23 | 101 |
| Msa1220160 | AT2G33240.1 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1568 | 1662 | 2.73e-23 | 101 |
| Msa1220160 | AT2G33240.3 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1555 | 1649 | 2.75e-23 | 101 |
| Msa1220160 | AT2G33240.8 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1547 | 1641 | 2.86e-23 | 101 |
| Msa1220160 | AT2G33240.7 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1547 | 1641 | 2.86e-23 | 101 |
| Msa1220160 | AT2G33240.4 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1562 | 1656 | 2.86e-23 | 101 |
| Msa1220160 | AT2G33240.6 | 45.370 | 108 | 46 | 1 | 47 | 154 | 1567 | 1661 | 2.86e-23 | 101 |
| Msa1220160 | AT5G20470.1 | 68.333 | 60 | 8 | 1 | 106 | 154 | 381 | 440 | 2.77e-19 | 89.0 |
| Msa1220160 | AT2G20320.2 | 31.651 | 218 | 70 | 3 | 129 | 267 | 788 | 1005 | 5.52e-19 | 88.6 |
| Msa1220160 | AT2G20320.1 | 31.651 | 218 | 70 | 3 | 129 | 267 | 788 | 1005 | 5.52e-19 | 88.6 |
Find 80 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAATGGATGAGAATATT+TGG | 0.179164 | 8_1:-83171526 | None:intergenic |
| TCCCGTCAAGGTTTAGTAAA+AGG | 0.225736 | 8_1:+83171295 | Msa1220160:CDS |
| GCCTTCCTTGAGAAATTATA+TGG | 0.229926 | 8_1:+83170599 | Msa1220160:five_prime_UTR |
| TTAACAGGCACCTCCTTTCT+TGG | 0.247759 | 8_1:+83171487 | Msa1220160:intron |
| AGTTGTTGCCTGCTCTAATT+TGG | 0.255522 | 8_1:+83172322 | Msa1220160:CDS |
| TTATCTTTGCTGAAGCATTC+TGG | 0.300468 | 8_1:-83177881 | None:intergenic |
| TAGGCAAGCAGTTGGATTCC+TGG | 0.338486 | 8_1:+83171859 | Msa1220160:CDS |
| CCTTATCACGCAGCTCTTGT+AGG | 0.343628 | 8_1:+83174188 | Msa1220160:CDS |
| GTATACACAGTCCAAGTAAT+GGG | 0.361512 | 8_1:-83170655 | None:intergenic |
| CTTGGCAGTTGTGGTATTGT+TGG | 0.362762 | 8_1:-83174137 | None:intergenic |
| TTGATGTTCAATTATTCAAC+AGG | 0.381005 | 8_1:+83171543 | Msa1220160:CDS |
| CCTACAAGAGCTGCGTGATA+AGG | 0.400743 | 8_1:-83174188 | None:intergenic |
| AGTGTTGTTCATTCAGCAAC+GGG | 0.408930 | 8_1:+83171667 | Msa1220160:CDS |
| GGGAGGAACTGAAACATATT+AGG | 0.409733 | 8_1:+83171840 | Msa1220160:CDS |
| GATATTAGCTCTTTCTGTCT+TGG | 0.423417 | 8_1:-83174155 | None:intergenic |
| ATCAATGGATGAGAATATTT+GGG | 0.423721 | 8_1:-83171525 | None:intergenic |
| TAACATTGGTAAACTTTGAC+TGG | 0.428914 | 8_1:-83173686 | None:intergenic |
| CTACAAGAGCTGCGTGATAA+GGG | 0.433410 | 8_1:-83174187 | None:intergenic |
| CCCGTCAAGGTTTAGTAAAA+GGG | 0.435935 | 8_1:+83171296 | Msa1220160:CDS |
| ATATTTGGGTGAACACTTTG+TGG | 0.436056 | 8_1:-83171511 | None:intergenic |
| CTACGACGAATATTAGCAAT+AGG | 0.464254 | 8_1:+83177161 | Msa1220160:CDS |
| AAAGAGATATCCCCATTACT+TGG | 0.472318 | 8_1:+83170644 | Msa1220160:CDS |
| TGAAAGGCCGATCGCGATAC+GGG | 0.475706 | 8_1:-83175748 | None:intergenic |
| AAACCTTGACGGGAGGTCCT+TGG | 0.476523 | 8_1:-83171286 | None:intergenic |
| ATTCTTAGCAGGAATTCTGC+TGG | 0.483107 | 8_1:+83172289 | Msa1220160:CDS |
| TCGCGATCGGCCTTTCATGA+AGG | 0.485771 | 8_1:+83175754 | Msa1220160:CDS |
| AAACTTTGACTGGACTTCAC+TGG | 0.488522 | 8_1:-83173676 | None:intergenic |
| ATGAAAGGCCGATCGCGATA+CGG | 0.489565 | 8_1:-83175749 | None:intergenic |
| TCCATATAATTTCTCAAGGA+AGG | 0.491269 | 8_1:-83170600 | None:intergenic |
| GTTGAATAATTGAACATCAA+TGG | 0.493400 | 8_1:-83171540 | None:intergenic |
| AACACTTTGTGGACCAAGAA+AGG | 0.495696 | 8_1:-83171500 | None:intergenic |
| ATTACTTGGACTGTGTATAC+AGG | 0.498198 | 8_1:+83170658 | Msa1220160:CDS |
| TTATTGTGGTTGATGCCAAC+AGG | 0.502457 | 8_1:+83173706 | Msa1220160:CDS |
| CAGGTGTTAACATTCTTAGC+AGG | 0.509682 | 8_1:+83172278 | Msa1220160:intron |
| TCTTGTAGGAGAAAGTTACT+TGG | 0.510737 | 8_1:+83174202 | Msa1220160:CDS |
| TCTTTCTGTCTTGGCAGTTG+TGG | 0.523888 | 8_1:-83174146 | None:intergenic |
| GGTTGATGCCAACAGGAACC+AGG | 0.534661 | 8_1:+83173713 | Msa1220160:CDS |
| AAGAAATAAACCTTCATGAA+AGG | 0.534930 | 8_1:-83175764 | None:intergenic |
| ACAGTACACTGGCTCGGCGT+GGG | 0.535985 | 8_1:+83171820 | Msa1220160:intron |
| GGAGTATGTGAAGACAGGTT+TGG | 0.537057 | 8_1:+83171689 | Msa1220160:CDS |
| AACGGGGAGTATGTGAAGAC+AGG | 0.537150 | 8_1:+83171684 | Msa1220160:CDS |
| TCGTAGAACCCGATTGAGCA+TGG | 0.539893 | 8_1:-83177144 | None:intergenic |
| TAGGAGAAAGTTACTTGGGA+AGG | 0.540092 | 8_1:+83174207 | Msa1220160:CDS |
| AAACATATTAGGCAAGCAGT+TGG | 0.541928 | 8_1:+83171851 | Msa1220160:CDS |
| GTATGAATGCACAGAAGTGC+AGG | 0.544270 | 8_1:+83174241 | Msa1220160:CDS |
| ACAAGTAGAAGCAAAATATC+CGG | 0.544619 | 8_1:+83170550 | Msa1220160:five_prime_UTR |
| GCTCATTCCCGTATCGCGAT+CGG | 0.546570 | 8_1:+83175741 | Msa1220160:CDS |
| AGCAAGCTTTAATAGCTCAC+TGG | 0.550058 | 8_1:+83171344 | Msa1220160:CDS |
| CTTGTAGGAGAAAGTTACTT+GGG | 0.552826 | 8_1:+83174203 | Msa1220160:CDS |
| TACAGTACACTGGCTCGGCG+TGG | 0.554550 | 8_1:+83171819 | Msa1220160:intron |
| GTGATTACAGTTGCAAGTTG+AGG | 0.559876 | 8_1:+83177762 | Msa1220160:intron |
| TGTATACACAGTCCAAGTAA+TGG | 0.560179 | 8_1:-83170656 | None:intergenic |
| TTGTTTACAGTACACTGGCT+CGG | 0.560577 | 8_1:+83171814 | Msa1220160:intron |
| AACACAAACCTGGTTCCTGT+TGG | 0.574238 | 8_1:-83173721 | None:intergenic |
| AAAGTTTACCAATGTTATTG+TGG | 0.574396 | 8_1:+83173692 | Msa1220160:CDS |
| ATCTATTGTTTACAGTACAC+TGG | 0.577132 | 8_1:+83171809 | Msa1220160:intron |
| GGTCCAAGGTGTAACAGTTG+TGG | 0.577707 | 8_1:+83177847 | Msa1220160:CDS |
| TCAATAAGCATGTCTTTGAG+TGG | 0.578439 | 8_1:+83177805 | Msa1220160:CDS |
| GGCATCAACCACAATAACAT+TGG | 0.578806 | 8_1:-83173700 | None:intergenic |
| AAACCACAACTGTTACACCT+TGG | 0.584325 | 8_1:-83177850 | None:intergenic |
| CGAGGTCTTAGTAGACTCGA+TGG | 0.584936 | 8_1:+83170521 | Msa1220160:five_prime_UTR |
| TCATTCCATATAATTTCTCA+AGG | 0.589514 | 8_1:-83170604 | None:intergenic |
| GAGTGTTGTTCATTCAGCAA+CGG | 0.589858 | 8_1:+83171666 | Msa1220160:CDS |
| TAAAACAACTGCAGGCTCCA+AGG | 0.593785 | 8_1:+83171269 | Msa1220160:intron |
| TGTTGCTTAAACAAAAGTGC+CGG | 0.593946 | 8_1:-83170569 | None:intergenic |
| GTACACTGGCTCGGCGTGGG+AGG | 0.599670 | 8_1:+83171823 | Msa1220160:intron |
| AACACATACCAAATTAGAGC+AGG | 0.601107 | 8_1:-83172330 | None:intergenic |
| AAAGTTACTTGGGAAGGAGA+AGG | 0.608555 | 8_1:+83174213 | Msa1220160:CDS |
| ACTTCTGTGCATTCATACAC+TGG | 0.608746 | 8_1:-83174236 | None:intergenic |
| AGAGTGAAGAGCGTGGTCCA+AGG | 0.619539 | 8_1:+83177833 | Msa1220160:CDS |
| GCTCCAAGGACCTCCCGTCA+AGG | 0.620806 | 8_1:+83171283 | Msa1220160:CDS |
| GTTTGGCTGAATTAGAACAA+TGG | 0.650748 | 8_1:+83171706 | Msa1220160:CDS |
| GTGCATCGAGGCAACAGAGG+AGG | 0.651278 | 8_1:+83171728 | Msa1220160:CDS |
| TATACACAGTCCAAGTAATG+GGG | 0.661207 | 8_1:-83170654 | None:intergenic |
| AGGGCGCTCACATGCTAACG+CGG | 0.664578 | 8_1:+83171315 | Msa1220160:CDS |
| ATGGTGCATCGAGGCAACAG+AGG | 0.665195 | 8_1:+83171725 | Msa1220160:CDS |
| ACTTTGTGGACCAAGAAAGG+AGG | 0.707456 | 8_1:-83171497 | None:intergenic |
| GTGTTGTTCATTCAGCAACG+GGG | 0.731245 | 8_1:+83171668 | Msa1220160:CDS |
| ATTAGAACAATGGTGCATCG+AGG | 0.736741 | 8_1:+83171716 | Msa1220160:CDS |
| GGACTGAAGAGTGAAGAGCG+TGG | 0.764872 | 8_1:+83177826 | Msa1220160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTAATTTGAATAAATAT+AGG | - | chr8_1:83170903-83170922 | None:intergenic | 10.0% |
| !! | NNNNNNNNNNATTTCATTCA+GGG | - | chr8_1:83171993-83172012 | None:intergenic | 10.0% |
| !!! | ATTTATTTTTTATTATTCCT+TGG | - | chr8_1:83172600-83172619 | None:intergenic | 10.0% |
| !! | AACAAACTAATAAATATAAA+AGG | - | chr8_1:83175367-83175386 | None:intergenic | 10.0% |
| !!! | TTTTTAAATTATACACAATA+AGG | - | chr8_1:83175561-83175580 | None:intergenic | 10.0% |
| !!! | TAATGTTTTTAAATTTCAAA+CGG | + | chr8_1:83175824-83175843 | Msa1220160:intron | 10.0% |
| !!! | TTCATAAACAATATTTTTAA+AGG | - | chr8_1:83177050-83177069 | None:intergenic | 10.0% |
| !! | TTAATTAACATGTATAAACT+CGG | - | chr8_1:83173185-83173204 | None:intergenic | 15.0% |
| !! | ATGAAAGTTAATATTAAAGT+TGG | - | chr8_1:83173482-83173501 | None:intergenic | 15.0% |
| !! | TAAAAATTTATCAGCAAATT+AGG | - | chr8_1:83174902-83174921 | None:intergenic | 15.0% |
| !!! | ATTTGCTGATAAATTTTTAT+TGG | + | chr8_1:83174903-83174922 | Msa1220160:intron | 15.0% |
| !! | CACTAAAAAATTACAATTAA+TGG | - | chr8_1:83175428-83175447 | None:intergenic | 15.0% |
| !!! | TAATTTTTATTGTGTAGTTT+AGG | - | chr8_1:83176661-83176680 | None:intergenic | 15.0% |
| !! | AAATTAAATAGTAAAAGGTA+TGG | + | chr8_1:83176675-83176694 | Msa1220160:intron | 15.0% |
| !! | AAAAATTAAAAATCTTGTCA+TGG | - | chr8_1:83176820-83176839 | None:intergenic | 15.0% |
| !!! | ATATTTATTTGATACCATTT+TGG | + | chr8_1:83176858-83176877 | Msa1220160:intron | 15.0% |
| !!! | AACAGATAATACATTTTATA+GGG | - | chr8_1:83177077-83177096 | None:intergenic | 15.0% |
| !!! | AAACAGATAATACATTTTAT+AGG | - | chr8_1:83177078-83177097 | None:intergenic | 15.0% |
| !!! | ATAAAATGTATTATCTGTTT+TGG | + | chr8_1:83177078-83177097 | Msa1220160:intron | 15.0% |
| !!! | AGGAAACAATTTTTTTTAAA+AGG | + | chr8_1:83177259-83177278 | Msa1220160:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr8_1:83177423-83177442 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8_1:83177424-83177443 | None:intergenic | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr8_1:83177488-83177507 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr8_1:83177489-83177508 | None:intergenic | 15.0% |
| !!! | ATACCTTACCTTTTTTTTTT+TGG | + | chr8_1:83170688-83170707 | Msa1220160:intron | 20.0% |
| !!! | TACCTTACCTTTTTTTTTTT+GGG | + | chr8_1:83170689-83170708 | Msa1220160:intron | 20.0% |
| !! | AACAATCTGAATTAATTGTT+TGG | - | chr8_1:83171760-83171779 | None:intergenic | 20.0% |
| !!! | ATTGTTTACTTTTCCATTTT+AGG | + | chr8_1:83171774-83171793 | Msa1220160:intron | 20.0% |
| !! | TACAAATTCAAATTCGATAT+TGG | + | chr8_1:83171900-83171919 | Msa1220160:intron | 20.0% |
| !! | ATCATTACAAATTTAATCTG+AGG | - | chr8_1:83172359-83172378 | None:intergenic | 20.0% |
| !!! | TTTTTATTTCTTCTCATCAT+TGG | + | chr8_1:83172522-83172541 | Msa1220160:intron | 20.0% |
| !! | ATCTAATTGGTCAATAAAAA+TGG | - | chr8_1:83172634-83172653 | None:intergenic | 20.0% |
| !! | ATGTTTATGATTATCTTCTT+TGG | + | chr8_1:83172927-83172946 | Msa1220160:intron | 20.0% |
| !! | TAAGAATACTCACTATATAA+GGG | - | chr8_1:83173298-83173317 | None:intergenic | 20.0% |
| !! | ATAAGAATACTCACTATATA+AGG | - | chr8_1:83173299-83173318 | None:intergenic | 20.0% |
| !!! | TAAGTCGATCATATTTTTAA+TGG | - | chr8_1:83173335-83173354 | None:intergenic | 20.0% |
| !! | TGATATAAGCTATATTTCTT+TGG | + | chr8_1:83173449-83173468 | Msa1220160:intron | 20.0% |
| !! | AGTTAATATTAAAGTTGGAT+TGG | - | chr8_1:83173477-83173496 | None:intergenic | 20.0% |
| !!! | AATTTTGTTTCGAATTTAAC+TGG | + | chr8_1:83173548-83173567 | Msa1220160:intron | 20.0% |
| !! | ATTATCAAATATCAACTGAT+GGG | - | chr8_1:83173593-83173612 | None:intergenic | 20.0% |
| !! | TATTATCAAATATCAACTGA+TGG | - | chr8_1:83173594-83173613 | None:intergenic | 20.0% |
| !! | AGTAAGGATTAATTGATTAA+AGG | - | chr8_1:83174033-83174052 | None:intergenic | 20.0% |
| !! | TTTAATCAATTAATCCTTAC+TGG | + | chr8_1:83174032-83174051 | Msa1220160:intron | 20.0% |
| !!! | ATATTCTAATTTGTTGCAAT+AGG | + | chr8_1:83174106-83174125 | Msa1220160:intron | 20.0% |
| !! | AATAACGATCAATTCATTAA+GGG | - | chr8_1:83174271-83174290 | None:intergenic | 20.0% |
| !! | TAATAACGATCAATTCATTA+AGG | - | chr8_1:83174272-83174291 | None:intergenic | 20.0% |
| !! | AGTAAGATATAATAGAGTAA+GGG | + | chr8_1:83175172-83175191 | Msa1220160:intron | 20.0% |
| !!! | TGATTTATATCCTTATTTCT+AGG | - | chr8_1:83175390-83175409 | None:intergenic | 20.0% |
| !! | AATTTGTAAATGAAAAGAGT+TGG | + | chr8_1:83175579-83175598 | Msa1220160:intron | 20.0% |
| !!! | ATATAGTAATTTGTACCTTT+AGG | + | chr8_1:83175688-83175707 | Msa1220160:intron | 20.0% |
| !! | TTGTCATGGATAAAATAAAA+AGG | - | chr8_1:83176806-83176825 | None:intergenic | 20.0% |
| !! | TCTAAGAAACAAAATAACAA+AGG | + | chr8_1:83177239-83177258 | Msa1220160:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_1:83177354-83177373 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8_1:83177464-83177483 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr8_1:83177487-83177506 | None:intergenic | 20.0% |
| !! | TTACAATAAGAAACAAACAT+TGG | + | chr8_1:83177718-83177737 | Msa1220160:intron | 20.0% |
| ! | TCATTCCATATAATTTCTCA+AGG | - | chr8_1:83170607-83170626 | None:intergenic | 25.0% |
| !!! | ACCTTACCTTTTTTTTTTTG+GGG | + | chr8_1:83170690-83170709 | Msa1220160:intron | 25.0% |
| ! | TCATTTCCCCAAAAAAAAAA+AGG | - | chr8_1:83170699-83170718 | None:intergenic | 25.0% |
| ! | AATGGGAATTTCTCAAAATT+TGG | - | chr8_1:83170726-83170745 | None:intergenic | 25.0% |
| !!! | AAATTTTGAGAAATTCCCAT+TGG | + | chr8_1:83170725-83170744 | Msa1220160:intron | 25.0% |
| ! | TTACTTGAATGTCATATATG+AGG | + | chr8_1:83170786-83170805 | Msa1220160:intron | 25.0% |
| ! | TACTTGAATGTCATATATGA+GGG | + | chr8_1:83170787-83170806 | Msa1220160:intron | 25.0% |
| ! | TACAAGTATCTTAGAATTTG+TGG | - | chr8_1:83170868-83170887 | None:intergenic | 25.0% |
| !!! | AAGGGAAAAGTTTATTTTTC+TGG | - | chr8_1:83171002-83171021 | None:intergenic | 25.0% |
| ! | TCAGAAAACAATTCATAGAA+AGG | + | chr8_1:83171035-83171054 | Msa1220160:intron | 25.0% |
| !! | TTTTATGATAAAACAACTGC+AGG | + | chr8_1:83171261-83171280 | Msa1220160:intron | 25.0% |
| ! | ATCAATGGATGAGAATATTT+GGG | - | chr8_1:83171528-83171547 | None:intergenic | 25.0% |
| ! | GTTGAATAATTGAACATCAA+TGG | - | chr8_1:83171543-83171562 | None:intergenic | 25.0% |
| ! | TTGATGTTCAATTATTCAAC+AGG | + | chr8_1:83171543-83171562 | Msa1220160:CDS | 25.0% |
| ! | TGTACTGTAAACAATAGATT+GGG | - | chr8_1:83171808-83171827 | None:intergenic | 25.0% |
| ! | GACAGTAAATATTTATAACG+CGG | + | chr8_1:83172384-83172403 | Msa1220160:intron | 25.0% |
| !!! | TGCGTAAATTTAAGTTGAAT+TGG | + | chr8_1:83172785-83172804 | Msa1220160:intron | 25.0% |
| !! | GATTATCTTCTTTGGTAATA+TGG | + | chr8_1:83172935-83172954 | Msa1220160:intron | 25.0% |
| ! | TGTTCTTATCAGAAATCATA+AGG | - | chr8_1:83173223-83173242 | None:intergenic | 25.0% |
| !! | ATATTTGATAATACCATTGC+TGG | + | chr8_1:83173601-83173620 | Msa1220160:intron | 25.0% |
| ! | AAAGTTTACCAATGTTATTG+TGG | + | chr8_1:83173692-83173711 | Msa1220160:CDS | 25.0% |
| !! | TACATCTTTAGACAATTTTG+TGG | + | chr8_1:83173999-83174018 | Msa1220160:intron | 25.0% |
| !! | TCAGAGATACTAGAAATTTT+CGG | - | chr8_1:83174389-83174408 | None:intergenic | 25.0% |
| ! | ACTAAAGAGGTTATAACAAT+AGG | - | chr8_1:83174659-83174678 | None:intergenic | 25.0% |
| ! | CTTATGATTAAAGACTAAAG+AGG | - | chr8_1:83174672-83174691 | None:intergenic | 25.0% |
| !! | CTCTTTAGTCTTTAATCATA+AGG | + | chr8_1:83174670-83174689 | Msa1220160:intron | 25.0% |
| ! | CTTTAATCATAAGGATTTGA+TGG | + | chr8_1:83174679-83174698 | Msa1220160:intron | 25.0% |
| !! | CATAATTTTACCCAAAAAAG+AGG | + | chr8_1:83174734-83174753 | Msa1220160:intron | 25.0% |
| ! | GTAAAGAATTTCACTCAAAA+AGG | - | chr8_1:83174870-83174889 | None:intergenic | 25.0% |
| ! | ACTGTATTGAAATAATGTAG+AGG | - | chr8_1:83174963-83174982 | None:intergenic | 25.0% |
| ! | CTACATTATTTCAATACAGT+TGG | + | chr8_1:83174963-83174982 | Msa1220160:intron | 25.0% |
| !! | TAATTTTTCCTAATGACCAT+TGG | - | chr8_1:83175138-83175157 | None:intergenic | 25.0% |
| ! | CAGTAAGATATAATAGAGTA+AGG | + | chr8_1:83175171-83175190 | Msa1220160:intron | 25.0% |
| ! | ACATATTACGAGTTTATTGT+AGG | - | chr8_1:83175295-83175314 | None:intergenic | 25.0% |
| !!! | TTAGTTTGTTCCTAGAAATA+AGG | + | chr8_1:83175377-83175396 | Msa1220160:intron | 25.0% |
| ! | TATTCCTTGTGTATATATAG+AGG | - | chr8_1:83175474-83175493 | None:intergenic | 25.0% |
| ! | CAATAAGGTTTAAATCAGAA+AGG | - | chr8_1:83175546-83175565 | None:intergenic | 25.0% |
| ! | CATTTATTAACGAATAACGA+TGG | - | chr8_1:83175616-83175635 | None:intergenic | 25.0% |
| ! | AAGAAATAAACCTTCATGAA+AGG | - | chr8_1:83175767-83175786 | None:intergenic | 25.0% |
| !! | TTCTCTGATTTTTATCTTCT+TGG | + | chr8_1:83175936-83175955 | Msa1220160:intron | 25.0% |
| !! | AATTTAGCGAGACAAATTTT+TGG | - | chr8_1:83175996-83176015 | None:intergenic | 25.0% |
| !!! | TTTCTTTTTCAACTTTGAAC+CGG | + | chr8_1:83176108-83176127 | Msa1220160:intron | 25.0% |
| !! | AGTTAAAATTTTCTCCCTTT+GGG | + | chr8_1:83176596-83176615 | Msa1220160:intron | 25.0% |
| ! | AATTATTAGTGAATTGTACG+AGG | + | chr8_1:83176735-83176754 | Msa1220160:intron | 25.0% |
| !!! | TTTTAATTTGACAAAACCCA+TGG | - | chr8_1:83176774-83176793 | None:intergenic | 25.0% |
| !!! | GTTCTAAAGAATAACCAAAA+TGG | - | chr8_1:83176875-83176894 | None:intergenic | 25.0% |
| ! | TTTACACAATAATCGAACTT+TGG | - | chr8_1:83176929-83176948 | None:intergenic | 25.0% |
| !!! | TTTGTTAGCTTTTATGTTAC+AGG | - | chr8_1:83177211-83177230 | None:intergenic | 25.0% |
| !!! | TTTTTTTATCTTAGTCCCTT+TGG | - | chr8_1:83177300-83177319 | None:intergenic | 25.0% |
| ! | GGGACTAAGATAAAAAAAAA+AGG | + | chr8_1:83177302-83177321 | Msa1220160:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_1:83177355-83177374 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr8_1:83177376-83177395 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr8_1:83177377-83177396 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8_1:83177465-83177484 | None:intergenic | 25.0% |
| !! | TTGCACGTATTATAAGATTT+TGG | + | chr8_1:83177680-83177699 | Msa1220160:intron | 25.0% |
| ! | TTCTTATTGTAATGCCAATT+GGG | - | chr8_1:83177710-83177729 | None:intergenic | 25.0% |
| ! | TTTCTTATTGTAATGCCAAT+TGG | - | chr8_1:83177711-83177730 | None:intergenic | 25.0% |
| ACAAGTAGAAGCAAAATATC+CGG | + | chr8_1:83170550-83170569 | Msa1220160:five_prime_UTR | 30.0% | |
| TCCATATAATTTCTCAAGGA+AGG | - | chr8_1:83170603-83170622 | None:intergenic | 30.0% | |
| TCCCCAAAAAAAAAAAGGTA+AGG | - | chr8_1:83170694-83170713 | None:intergenic | 30.0% | |
| AAGTAAAATCCAAGTACGAT+TGG | - | chr8_1:83170772-83170791 | None:intergenic | 30.0% | |
| GTATCTTAGAATTTGTGGTT+GGG | - | chr8_1:83170863-83170882 | None:intergenic | 30.0% | |
| AGTATCTTAGAATTTGTGGT+TGG | - | chr8_1:83170864-83170883 | None:intergenic | 30.0% | |
| TCTGATTTAGCAAGCAAAAA+GGG | - | chr8_1:83171020-83171039 | None:intergenic | 30.0% | |
| TTCTGATTTAGCAAGCAAAA+AGG | - | chr8_1:83171021-83171040 | None:intergenic | 30.0% | |
| AAGTACCTACTAGTGATTTA+GGG | - | chr8_1:83171137-83171156 | None:intergenic | 30.0% | |
| TTAAGATCAAACTCGGATAA+CGG | - | chr8_1:83171452-83171471 | None:intergenic | 30.0% | |
| AAACAGGTTAAGATCAAACT+CGG | - | chr8_1:83171459-83171478 | None:intergenic | 30.0% | |
| TGATCTTAACCTGTTTGAAA+TGG | + | chr8_1:83171463-83171482 | Msa1220160:intron | 30.0% | |
| CATCAATGGATGAGAATATT+TGG | - | chr8_1:83171529-83171548 | None:intergenic | 30.0% | |
| TTGGGGTAAAAATCCTAAAA+TGG | - | chr8_1:83171790-83171809 | None:intergenic | 30.0% | |
| GTACTGTAAACAATAGATTG+GGG | - | chr8_1:83171807-83171826 | None:intergenic | 30.0% | |
| GTGTACTGTAAACAATAGAT+TGG | - | chr8_1:83171809-83171828 | None:intergenic | 30.0% | |
| ATCTATTGTTTACAGTACAC+TGG | + | chr8_1:83171809-83171828 | Msa1220160:intron | 30.0% | |
| GTATCTATTACGTAAATGAC+CGG | + | chr8_1:83171922-83171941 | Msa1220160:intron | 30.0% | |
| ! | GCATAATTTTCCCTCTAATT+TGG | - | chr8_1:83172119-83172138 | None:intergenic | 30.0% |
| !! | GGTTATATTGTTTTGTCCTT+TGG | + | chr8_1:83172439-83172458 | Msa1220160:intron | 30.0% |
| TTTCATGATAGACTGACTAA+AGG | + | chr8_1:83172569-83172588 | Msa1220160:intron | 30.0% | |
| TAAGAAGACCTTACGAAAAT+CGG | + | chr8_1:83172714-83172733 | Msa1220160:intron | 30.0% | |
| ! | TATTGTTTCTTTCATGACCA+GGG | + | chr8_1:83173052-83173071 | Msa1220160:intron | 30.0% |
| ! | TAAACTCGGTCACTTTAATA+TGG | - | chr8_1:83173171-83173190 | None:intergenic | 30.0% |
| TCTTATCAGAAATCATAAGG+TGG | - | chr8_1:83173220-83173239 | None:intergenic | 30.0% | |
| ! | TGATAAGAACATGATTTTCC+AGG | + | chr8_1:83173232-83173251 | Msa1220160:intron | 30.0% |
| AAAAACTCAAGCATGTCATT+CGG | - | chr8_1:83173263-83173282 | None:intergenic | 30.0% | |
| CTTTCATTGAACATGTTCAA+GGG | - | chr8_1:83173414-83173433 | None:intergenic | 30.0% | |
| ACTTTCATTGAACATGTTCA+AGG | - | chr8_1:83173415-83173434 | None:intergenic | 30.0% | |
| !! | GATAAACTTAGATTTGCTAG+TGG | + | chr8_1:83173511-83173530 | Msa1220160:intron | 30.0% |
| !!! | ACCTAGAGGATCAATTTTTT+AGG | - | chr8_1:83173639-83173658 | None:intergenic | 30.0% |
| AAAAAATTGATCCTCTAGGT+TGG | + | chr8_1:83173639-83173658 | Msa1220160:intron | 30.0% | |
| TAACATTGGTAAACTTTGAC+TGG | - | chr8_1:83173689-83173708 | None:intergenic | 30.0% | |
| GCTTTACAATTGTAAAAGGA+AGG | - | chr8_1:83173830-83173849 | None:intergenic | 30.0% | |
| CACAGCTTTACAATTGTAAA+AGG | - | chr8_1:83173834-83173853 | None:intergenic | 30.0% | |
| ! | CTTTTACAATTGTAAAGCTG+TGG | + | chr8_1:83173832-83173851 | Msa1220160:intron | 30.0% |
| ATATAATACACGAAGCACAT+GGG | - | chr8_1:83174299-83174318 | None:intergenic | 30.0% | |
| ! | TGTTTGATAACAGTTAGACA+TGG | - | chr8_1:83174428-83174447 | None:intergenic | 30.0% |
| ATCGTCATTTGATTGTACAT+TGG | - | chr8_1:83174583-83174602 | None:intergenic | 30.0% | |
| TGTACAATCAAATGACGATA+AGG | + | chr8_1:83174584-83174603 | Msa1220160:intron | 30.0% | |
| ! | TTGCTTCTGAGAATAAAGTA+CGG | - | chr8_1:83174611-83174630 | None:intergenic | 30.0% |
| TCTCAGAAGCAAATTAAGTT+AGG | + | chr8_1:83174619-83174638 | Msa1220160:intron | 30.0% | |
| !!! | TGCAATTGTTCCTCTTTTTT+GGG | - | chr8_1:83174747-83174766 | None:intergenic | 30.0% |
| !!! | ATGCAATTGTTCCTCTTTTT+TGG | - | chr8_1:83174748-83174767 | None:intergenic | 30.0% |
| AAATTACCCAATCCATAACA+GGG | - | chr8_1:83174785-83174804 | None:intergenic | 30.0% | |
| ! | TTCAAGTTCAGTGATATGAA+TGG | + | chr8_1:83174933-83174952 | Msa1220160:intron | 30.0% |
| ACTAAAAGCGACAGTAATAT+AGG | - | chr8_1:83175043-83175062 | None:intergenic | 30.0% | |
| AAAAATGATGTTAACACGCA+CGG | + | chr8_1:83175072-83175091 | Msa1220160:intron | 30.0% | |
| GTGTATATATAGAGGTTACA+AGG | - | chr8_1:83175466-83175485 | None:intergenic | 30.0% | |
| GTAACCTCTATATATACACA+AGG | + | chr8_1:83175467-83175486 | Msa1220160:intron | 30.0% | |
| ACAAGGAATAACAATGAGAA+AGG | + | chr8_1:83175484-83175503 | Msa1220160:intron | 30.0% | |
| TCAAAAGCAAAGATACCTAA+AGG | - | chr8_1:83175706-83175725 | None:intergenic | 30.0% | |
| !! | TTAGGTATCTTTGCTTTTGA+AGG | + | chr8_1:83175706-83175725 | Msa1220160:intron | 30.0% |
| !! | ATACAGAATGCATATTTTGG+AGG | - | chr8_1:83175897-83175916 | None:intergenic | 30.0% |
| ! | CACATACAGAATGCATATTT+TGG | - | chr8_1:83175900-83175919 | None:intergenic | 30.0% |
| GTTGTAACTCTTTGTATTGT+GGG | + | chr8_1:83176078-83176097 | Msa1220160:intron | 30.0% | |
| TTGTAACTCTTTGTATTGTG+GGG | + | chr8_1:83176079-83176098 | Msa1220160:intron | 30.0% | |
| ! | AGAAATATTGACTGATAAGC+CGG | - | chr8_1:83176130-83176149 | None:intergenic | 30.0% |
| TTCAAAGACAATTGAACATG+CGG | + | chr8_1:83176239-83176258 | Msa1220160:intron | 30.0% | |
| !! | CAGCTTAATTTTGTTTGTCT+TGG | + | chr8_1:83176293-83176312 | Msa1220160:intron | 30.0% |
| TCTTCTGTACAAAAGGAATA+GGG | + | chr8_1:83176478-83176497 | Msa1220160:intron | 30.0% | |
| TTGTATTGTTTCAAGCATGA+AGG | + | chr8_1:83176536-83176555 | Msa1220160:intron | 30.0% | |
| ! | GAGTTAAAATTTTCTCCCTT+TGG | + | chr8_1:83176595-83176614 | Msa1220160:intron | 30.0% |
| ! | GTTAAAATTTTCTCCCTTTG+GGG | + | chr8_1:83176597-83176616 | Msa1220160:intron | 30.0% |
| !! | TGGTTATTCTTTAGAACTGA+AGG | + | chr8_1:83176878-83176897 | Msa1220160:intron | 30.0% |
| !!! | TTTTTAGAACCATGCTCAAT+CGG | + | chr8_1:83177135-83177154 | Msa1220160:intron | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8_1:83177480-83177499 | None:intergenic | 30.0% | |
| GCAAATGCTTACAAAAAATG+CGG | + | chr8_1:83177611-83177630 | Msa1220160:intron | 30.0% | |
| TCTTATTGTAATGCCAATTG+GGG | - | chr8_1:83177709-83177728 | None:intergenic | 30.0% | |
| ! | TGTTGCTTAAACAAAAGTGC+CGG | - | chr8_1:83170572-83170591 | None:intergenic | 35.0% |
| GCCTTCCTTGAGAAATTATA+TGG | + | chr8_1:83170599-83170618 | Msa1220160:five_prime_UTR | 35.0% | |
| !!! | ATGGGGATATCTCTTTTTTC+AGG | - | chr8_1:83170640-83170659 | None:intergenic | 35.0% |
| AAAGAGATATCCCCATTACT+TGG | + | chr8_1:83170644-83170663 | Msa1220160:CDS | 35.0% | |
| TATACACAGTCCAAGTAATG+GGG | - | chr8_1:83170657-83170676 | None:intergenic | 35.0% | |
| GTATACACAGTCCAAGTAAT+GGG | - | chr8_1:83170658-83170677 | None:intergenic | 35.0% | |
| TGTATACACAGTCCAAGTAA+TGG | - | chr8_1:83170659-83170678 | None:intergenic | 35.0% | |
| ATTACTTGGACTGTGTATAC+AGG | + | chr8_1:83170658-83170677 | Msa1220160:CDS | 35.0% | |
| ! | TGAGAAATTCCCATTGGTTA+AGG | + | chr8_1:83170731-83170750 | Msa1220160:intron | 35.0% |
| ! | GAGAAATTCCCATTGGTTAA+GGG | + | chr8_1:83170732-83170751 | Msa1220160:intron | 35.0% |
| ! | AGAAATTCCCATTGGTTAAG+GGG | + | chr8_1:83170733-83170752 | Msa1220160:intron | 35.0% |
| CTATGAATTCCTGTGTTTGA+GGG | - | chr8_1:83170948-83170967 | None:intergenic | 35.0% | |
| TCTATGAATTCCTGTGTTTG+AGG | - | chr8_1:83170949-83170968 | None:intergenic | 35.0% | |
| TCAAACACAGGAATTCATAG+AGG | + | chr8_1:83170948-83170967 | Msa1220160:intron | 35.0% | |
| TTTCATCTGTTAATTGCACC+TGG | + | chr8_1:83171064-83171083 | Msa1220160:intron | 35.0% | |
| ATAACAGAAGAAGATTGTCC+AGG | - | chr8_1:83171085-83171104 | None:intergenic | 35.0% | |
| GTAATCCCTAAATCACTAGT+AGG | + | chr8_1:83171129-83171148 | Msa1220160:intron | 35.0% | |
| CAAGTACCTACTAGTGATTT+AGG | - | chr8_1:83171138-83171157 | None:intergenic | 35.0% | |
| ! | AATTAAGCTCGTCGATTACT+GGG | - | chr8_1:83171213-83171232 | None:intergenic | 35.0% |
| CCTGTTAAACCATTTCAAAC+AGG | - | chr8_1:83171475-83171494 | None:intergenic | 35.0% | |
| ! | CCTGTTTGAAATGGTTTAAC+AGG | + | chr8_1:83171472-83171491 | Msa1220160:intron | 35.0% |
| ATATTTGGGTGAACACTTTG+TGG | - | chr8_1:83171514-83171533 | None:intergenic | 35.0% | |
| AAATGCAAAGTGAGAGAAAG+AGG | - | chr8_1:83171572-83171591 | None:intergenic | 35.0% | |
| AAAAGCCTGCATTCTTCAAT+AGG | - | chr8_1:83171600-83171619 | None:intergenic | 35.0% | |
| GTTTGGCTGAATTAGAACAA+TGG | + | chr8_1:83171706-83171725 | Msa1220160:CDS | 35.0% | |
| AAACATATTAGGCAAGCAGT+TGG | + | chr8_1:83171851-83171870 | Msa1220160:CDS | 35.0% | |
| TGAAAACTGTGAATGTTACC+AGG | - | chr8_1:83171880-83171899 | None:intergenic | 35.0% | |
| TGAAAGAGAAAAATGAGAGC+CGG | - | chr8_1:83171944-83171963 | None:intergenic | 35.0% | |
| ATTTCATTCAGGGACTTCTT+AGG | - | chr8_1:83171983-83172002 | None:intergenic | 35.0% | |
| TTCAACTGTAGCCAAATTAG+AGG | + | chr8_1:83172105-83172124 | Msa1220160:intron | 35.0% | |
| TCAACTGTAGCCAAATTAGA+GGG | + | chr8_1:83172106-83172125 | Msa1220160:intron | 35.0% | |
| CTCATGAAGTTGAAATGTAG+TGG | + | chr8_1:83172170-83172189 | Msa1220160:intron | 35.0% | |
| GTTCAGAATGGACAAACAAT+CGG | - | chr8_1:83172254-83172273 | None:intergenic | 35.0% | |
| AACACATACCAAATTAGAGC+AGG | - | chr8_1:83172333-83172352 | None:intergenic | 35.0% | |
| ATTCTTGTTCCCTCATTGAT+TGG | + | chr8_1:83172466-83172485 | Msa1220160:intron | 35.0% | |
| AGTTGTAACAGCATGTATGT+TGG | - | chr8_1:83172681-83172700 | None:intergenic | 35.0% | |
| AAGAAGACCTTACGAAAATC+GGG | + | chr8_1:83172715-83172734 | Msa1220160:intron | 35.0% | |
| ! | GTATTGTTTCTTTCATGACC+AGG | + | chr8_1:83173051-83173070 | Msa1220160:intron | 35.0% |
| CTGATAAAACTGAAGCAGAA+AGG | - | chr8_1:83173081-83173100 | None:intergenic | 35.0% | |
| ATACTCACTATATAAGGGAC+AGG | - | chr8_1:83173293-83173312 | None:intergenic | 35.0% | |
| GCCTAAAAAATTGATCCTCT+AGG | + | chr8_1:83173635-83173654 | Msa1220160:intron | 35.0% | |
| CTGCATTAAAAACACAAACC+TGG | - | chr8_1:83173734-83173753 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTTCCATTTGCTCG+TGG | + | chr8_1:83173915-83173934 | Msa1220160:intron | 35.0% |
| TAATCCTTACTGGAATGAGA+TGG | + | chr8_1:83174042-83174061 | Msa1220160:intron | 35.0% | |
| ! | GATATTAGCTCTTTCTGTCT+TGG | - | chr8_1:83174158-83174177 | None:intergenic | 35.0% |
| TCTTGTAGGAGAAAGTTACT+TGG | + | chr8_1:83174202-83174221 | Msa1220160:CDS | 35.0% | |
| CTTGTAGGAGAAAGTTACTT+GGG | + | chr8_1:83174203-83174222 | Msa1220160:CDS | 35.0% | |
| GATATAATACACGAAGCACA+TGG | - | chr8_1:83174300-83174319 | None:intergenic | 35.0% | |
| AGCTACTAGTGTATCACAAA+TGG | - | chr8_1:83174337-83174356 | None:intergenic | 35.0% | |
| ! | GAGATACTAGAAATTTTCGG+AGG | - | chr8_1:83174386-83174405 | None:intergenic | 35.0% |
| !! | TCTTTAGTTCTTACCAGCTT+TGG | + | chr8_1:83174464-83174483 | Msa1220160:intron | 35.0% |
| ! | CATTGGTAATTGTGTGAGAA+CGG | - | chr8_1:83174566-83174585 | None:intergenic | 35.0% |
| ! | GTTGTAATCTAGAACTAACC+TGG | + | chr8_1:83174704-83174723 | Msa1220160:intron | 35.0% |
| AGGAACAATTGCATACTGTT+TGG | + | chr8_1:83174754-83174773 | Msa1220160:intron | 35.0% | |
| TGTTTGGTTAATCCCTGTTA+TGG | + | chr8_1:83174770-83174789 | Msa1220160:intron | 35.0% | |
| GTTAATCCCTGTTATGGATT+GGG | + | chr8_1:83174776-83174795 | Msa1220160:intron | 35.0% | |
| CAAATTACCCAATCCATAAC+AGG | - | chr8_1:83174786-83174805 | None:intergenic | 35.0% | |
| ATGAGCTTGAGTGTAAACTT+TGG | + | chr8_1:83174986-83175005 | Msa1220160:intron | 35.0% | |
| TGAGCTTGAGTGTAAACTTT+GGG | + | chr8_1:83174987-83175006 | Msa1220160:intron | 35.0% | |
| TAGATGATCCAATGGTCATT+AGG | + | chr8_1:83175127-83175146 | Msa1220160:intron | 35.0% | |
| GTTTAAATCAGAAAGGCAAG+TGG | - | chr8_1:83175539-83175558 | None:intergenic | 35.0% | |
| !! | CTTTTGAAGGAGAGTTTCAT+CGG | + | chr8_1:83175719-83175738 | Msa1220160:CDS | 35.0% |
| GGTTGTAACTCTTTGTATTG+TGG | + | chr8_1:83176077-83176096 | Msa1220160:intron | 35.0% | |
| ! | AAGCTTCATTTTGCACTAGA+AGG | + | chr8_1:83176175-83176194 | Msa1220160:intron | 35.0% |
| ! | GAACATGCGGATAATCTTTT+TGG | + | chr8_1:83176252-83176271 | Msa1220160:intron | 35.0% |
| ! | ATTCCTTTTGTACAGAAGAG+AGG | - | chr8_1:83176477-83176496 | None:intergenic | 35.0% |
| CTCTTCTGTACAAAAGGAAT+AGG | + | chr8_1:83176477-83176496 | Msa1220160:intron | 35.0% | |
| TTATTTACAAGTGCCCCAAA+GGG | - | chr8_1:83176613-83176632 | None:intergenic | 35.0% | |
| ATTATTTACAAGTGCCCCAA+AGG | - | chr8_1:83176614-83176633 | None:intergenic | 35.0% | |
| !!! | TTTTAGAACCATGCTCAATC+GGG | + | chr8_1:83177136-83177155 | Msa1220160:intron | 35.0% |
| CTACGACGAATATTAGCAAT+AGG | + | chr8_1:83177161-83177180 | Msa1220160:CDS | 35.0% | |
| ACCATGACAAAAGAACCAAA+GGG | + | chr8_1:83177282-83177301 | Msa1220160:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8_1:83177341-83177360 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr8_1:83177510-83177529 | Msa1220160:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr8_1:83177523-83177542 | Msa1220160:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | + | chr8_1:83177524-83177543 | Msa1220160:intron | 35.0% | |
| !!! | GGAGTCTTTTTGTTTTTGTG+TGG | + | chr8_1:83177632-83177651 | Msa1220160:intron | 35.0% |
| !!! | GTCTTTTTGTTTTTGTGTGG+TGG | + | chr8_1:83177635-83177654 | Msa1220160:intron | 35.0% |
| TTATTGTAATGCCAATTGGG+GGG | - | chr8_1:83177707-83177726 | None:intergenic | 35.0% | |
| CTTATTGTAATGCCAATTGG+GGG | - | chr8_1:83177708-83177727 | None:intergenic | 35.0% | |
| TCAATAAGCATGTCTTTGAG+TGG | + | chr8_1:83177805-83177824 | Msa1220160:CDS | 35.0% | |
| AAGTACACAACCCACAAAAC+CGG | - | chr8_1:83170831-83170850 | None:intergenic | 40.0% | |
| TTATAGAGACCCTCAAACAC+AGG | + | chr8_1:83170936-83170955 | Msa1220160:intron | 40.0% | |
| ! | GAATTAAGCTCGTCGATTAC+TGG | - | chr8_1:83171214-83171233 | None:intergenic | 40.0% |
| AATCGACGAGCTTAATTCTC+TGG | + | chr8_1:83171216-83171235 | Msa1220160:intron | 40.0% | |
| ! | TTTTACTAAACCTTGACGGG+AGG | - | chr8_1:83171296-83171315 | None:intergenic | 40.0% |
| TCCCGTCAAGGTTTAGTAAA+AGG | + | chr8_1:83171295-83171314 | Msa1220160:CDS | 40.0% | |
| ! | CCCTTTTACTAAACCTTGAC+GGG | - | chr8_1:83171299-83171318 | None:intergenic | 40.0% |
| CCCGTCAAGGTTTAGTAAAA+GGG | + | chr8_1:83171296-83171315 | Msa1220160:CDS | 40.0% | |
| ! | GCCCTTTTACTAAACCTTGA+CGG | - | chr8_1:83171300-83171319 | None:intergenic | 40.0% |
| ! | AGCAAGCTTTAATAGCTCAC+TGG | + | chr8_1:83171344-83171363 | Msa1220160:CDS | 40.0% |
| CGGAAATGCAGAAACTGAAA+GGG | - | chr8_1:83171432-83171451 | None:intergenic | 40.0% | |
| ACGGAAATGCAGAAACTGAA+AGG | - | chr8_1:83171433-83171452 | None:intergenic | 40.0% | |
| AACACTTTGTGGACCAAGAA+AGG | - | chr8_1:83171503-83171522 | None:intergenic | 40.0% | |
| CATGTCCTATTGAAGAATGC+AGG | + | chr8_1:83171592-83171611 | Msa1220160:intron | 40.0% | |
| ! | GAAGAATGCAGGCTTTTTGA+TGG | + | chr8_1:83171603-83171622 | Msa1220160:intron | 40.0% |
| !!! | GCTTTTTGATGGACTTGATC+TGG | + | chr8_1:83171614-83171633 | Msa1220160:CDS | 40.0% |
| ! | GAGTGTTGTTCATTCAGCAA+CGG | + | chr8_1:83171666-83171685 | Msa1220160:CDS | 40.0% |
| ! | AGTGTTGTTCATTCAGCAAC+GGG | + | chr8_1:83171667-83171686 | Msa1220160:CDS | 40.0% |
| ATTAGAACAATGGTGCATCG+AGG | + | chr8_1:83171716-83171735 | Msa1220160:CDS | 40.0% | |
| ! | TTGTTTACAGTACACTGGCT+CGG | + | chr8_1:83171814-83171833 | Msa1220160:intron | 40.0% |
| GGGAGGAACTGAAACATATT+AGG | + | chr8_1:83171840-83171859 | Msa1220160:CDS | 40.0% | |
| !! | GGCTCTCATTTTTCTCTTTC+AGG | + | chr8_1:83171943-83171962 | Msa1220160:intron | 40.0% |
| CAGGTGTTAACATTCTTAGC+AGG | + | chr8_1:83172278-83172297 | Msa1220160:intron | 40.0% | |
| ATTCTTAGCAGGAATTCTGC+TGG | + | chr8_1:83172289-83172308 | Msa1220160:CDS | 40.0% | |
| AGTTGTTGCCTGCTCTAATT+TGG | + | chr8_1:83172322-83172341 | Msa1220160:CDS | 40.0% | |
| ! | CTGTGGGTTATATGAGTCAA+TGG | + | chr8_1:83172418-83172437 | Msa1220160:intron | 40.0% |
| ACTGACTAAAGGATACACCA+AGG | + | chr8_1:83172580-83172599 | Msa1220160:intron | 40.0% | |
| CAGTTGGAGGCAAATCTAAT+TGG | - | chr8_1:83172647-83172666 | None:intergenic | 40.0% | |
| !!! | GTTGGACTTTTTGAGACAGT+TGG | - | chr8_1:83172663-83172682 | None:intergenic | 40.0% |
| AGAAGACCTTACGAAAATCG+GGG | + | chr8_1:83172716-83172735 | Msa1220160:intron | 40.0% | |
| ! | CATATACCCCGATTTTCGTA+AGG | - | chr8_1:83172725-83172744 | None:intergenic | 40.0% |
| CTAGTTAGTTATTCTGACGC+TGG | + | chr8_1:83172897-83172916 | Msa1220160:intron | 40.0% | |
| TATGCTTCACACACAATCCT+TGG | + | chr8_1:83172963-83172982 | Msa1220160:intron | 40.0% | |
| ATGCTTCACACACAATCCTT+GGG | + | chr8_1:83172964-83172983 | Msa1220160:intron | 40.0% | |
| TTAGTTGAAATGTCTCCCCA+AGG | - | chr8_1:83172983-83173002 | None:intergenic | 40.0% | |
| GAACTCAAACTGTCATTAGC+AGG | - | chr8_1:83173138-83173157 | None:intergenic | 40.0% | |
| TAAACTCTTGAAGTCAGTCC+AGG | + | chr8_1:83173353-83173372 | Msa1220160:intron | 40.0% | |
| TGTTCTTGATACCAACCTAG+AGG | - | chr8_1:83173653-83173672 | None:intergenic | 40.0% | |
| AAACTTTGACTGGACTTCAC+TGG | - | chr8_1:83173679-83173698 | None:intergenic | 40.0% | |
| GGCATCAACCACAATAACAT+TGG | - | chr8_1:83173703-83173722 | None:intergenic | 40.0% | |
| ! | TTATTGTGGTTGATGCCAAC+AGG | + | chr8_1:83173706-83173725 | Msa1220160:CDS | 40.0% |
| AAAGCTGTGGTTTCGAAAGA+AGG | + | chr8_1:83173845-83173864 | Msa1220160:intron | 40.0% | |
| GAATGTAATCCACGAGCAAA+TGG | - | chr8_1:83173927-83173946 | None:intergenic | 40.0% | |
| TAGGAGAAAGTTACTTGGGA+AGG | + | chr8_1:83174207-83174226 | Msa1220160:CDS | 40.0% | |
| AAAGTTACTTGGGAAGGAGA+AGG | + | chr8_1:83174213-83174232 | Msa1220160:CDS | 40.0% | |
| ACTTCTGTGCATTCATACAC+TGG | - | chr8_1:83174239-83174258 | None:intergenic | 40.0% | |
| ! | ATCTAGAACTAACCTGGACT+TGG | + | chr8_1:83174710-83174729 | Msa1220160:intron | 40.0% |
| ! | TCTAGAACTAACCTGGACTT+GGG | + | chr8_1:83174711-83174730 | Msa1220160:intron | 40.0% |
| GTAAAATTATGCCCAAGTCC+AGG | - | chr8_1:83174725-83174744 | None:intergenic | 40.0% | |
| GGTTAATCCCTGTTATGGAT+TGG | + | chr8_1:83174775-83174794 | Msa1220160:intron | 40.0% | |
| TCAACGAGTAGATGATCCAA+TGG | + | chr8_1:83175119-83175138 | Msa1220160:intron | 40.0% | |
| AACTGCAACTACTCCAACTA+TGG | - | chr8_1:83175208-83175227 | None:intergenic | 40.0% | |
| !! | AGTAGTTGCAGTTTGACTTG+CGG | + | chr8_1:83175215-83175234 | Msa1220160:intron | 40.0% |
| ! | CCTTACTTTGCATTTCTAGG+AGG | - | chr8_1:83175269-83175288 | None:intergenic | 40.0% |
| CCTCCTAGAAATGCAAAGTA+AGG | + | chr8_1:83175266-83175285 | Msa1220160:intron | 40.0% | |
| CAGCCTTACTTTGCATTTCT+AGG | - | chr8_1:83175272-83175291 | None:intergenic | 40.0% | |
| TATTCACACAGCAGACTTCA+GGG | - | chr8_1:83175327-83175346 | None:intergenic | 40.0% | |
| TTATTCACACAGCAGACTTC+AGG | - | chr8_1:83175328-83175347 | None:intergenic | 40.0% | |
| TGAAGTCTGCTGTGTGAATA+AGG | + | chr8_1:83175327-83175346 | Msa1220160:intron | 40.0% | |
| !! | CAGAATGCATATTTTGGAGG+TGG | - | chr8_1:83175894-83175913 | None:intergenic | 40.0% |
| CACTATCTTTCAGACAAGCT+TGG | + | chr8_1:83176023-83176042 | Msa1220160:intron | 40.0% | |
| ACGAAAAGCTGTTTAGCACA+AGG | - | chr8_1:83176418-83176437 | None:intergenic | 40.0% | |
| ! | TTGTGCTAAACAGCTTTTCG+TGG | + | chr8_1:83176417-83176436 | Msa1220160:intron | 40.0% |
| ! | CCAGAATGTTTTGCAAAGCT+TGG | - | chr8_1:83176507-83176526 | None:intergenic | 40.0% |
| CCAAGCTTTGCAAAACATTC+TGG | + | chr8_1:83176504-83176523 | Msa1220160:intron | 40.0% | |
| ATGGAGAGACTTCTAGACTA+TGG | + | chr8_1:83176694-83176713 | Msa1220160:intron | 40.0% | |
| AGGTCATTTCGCTTAGTGAT+TGG | + | chr8_1:83176898-83176917 | Msa1220160:intron | 40.0% | |
| GACCATGACAAAAGAACCAA+AGG | + | chr8_1:83177281-83177300 | Msa1220160:intron | 40.0% | |
| !!! | TCCCTTTGGTTCTTTTGTCA+TGG | - | chr8_1:83177286-83177305 | None:intergenic | 40.0% |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8_1:83177340-83177359 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr8_1:83177526-83177545 | None:intergenic | 40.0% | |
| AATATATACTACCTCCGTCC+CGG | - | chr8_1:83177545-83177564 | None:intergenic | 40.0% | |
| TATTGTAATGCCAATTGGGG+GGG | - | chr8_1:83177706-83177725 | None:intergenic | 40.0% | |
| CAACTTGCAACTGTAATCAC+AGG | - | chr8_1:83177762-83177781 | None:intergenic | 40.0% | |
| GTGATTACAGTTGCAAGTTG+AGG | + | chr8_1:83177762-83177781 | Msa1220160:intron | 40.0% | |
| AAACCACAACTGTTACACCT+TGG | - | chr8_1:83177853-83177872 | None:intergenic | 40.0% | |
| GCAAAAGCCCCTTAACCAAT+GGG | - | chr8_1:83170743-83170762 | None:intergenic | 45.0% | |
| TGCAAAAGCCCCTTAACCAA+TGG | - | chr8_1:83170744-83170763 | None:intergenic | 45.0% | |
| ! | TGGTTAAGGGGCTTTTGCAA+TGG | + | chr8_1:83170745-83170764 | Msa1220160:intron | 45.0% |
| TGCAATGGACCAATCGTACT+TGG | + | chr8_1:83170760-83170779 | Msa1220160:intron | 45.0% | |
| ! | TAGAGGCACATTGTCTGTGA+CGG | + | chr8_1:83170965-83170984 | Msa1220160:intron | 45.0% |
| TAAAACAACTGCAGGCTCCA+AGG | + | chr8_1:83171269-83171288 | Msa1220160:intron | 45.0% | |
| TTAACAGGCACCTCCTTTCT+TGG | + | chr8_1:83171487-83171506 | Msa1220160:intron | 45.0% | |
| ACTTTGTGGACCAAGAAAGG+AGG | - | chr8_1:83171500-83171519 | None:intergenic | 45.0% | |
| ! | GTGTTGTTCATTCAGCAACG+GGG | + | chr8_1:83171668-83171687 | Msa1220160:CDS | 45.0% |
| GGAGTATGTGAAGACAGGTT+TGG | + | chr8_1:83171689-83171708 | Msa1220160:CDS | 45.0% | |
| ACGTGAATGACAGTCACACT+TGG | - | chr8_1:83172200-83172219 | None:intergenic | 45.0% | |
| TTGTCCATTCTGAACTCTGC+AGG | + | chr8_1:83172259-83172278 | Msa1220160:intron | 45.0% | |
| AACACCTGCAGAGTTCAGAA+TGG | - | chr8_1:83172266-83172285 | None:intergenic | 45.0% | |
| GGGAACAAGAATGCTTCCAA+AGG | - | chr8_1:83172458-83172477 | None:intergenic | 45.0% | |
| !! | TGATTGGTCTCCGCAGTATT+CGG | + | chr8_1:83172482-83172501 | Msa1220160:intron | 45.0% |
| TGCTGTTGTTCCGAATACTG+CGG | - | chr8_1:83172495-83172514 | None:intergenic | 45.0% | |
| !! | TTCTCATCATTGGCTTGTCC+TGG | + | chr8_1:83172532-83172551 | Msa1220160:intron | 45.0% |
| GAAAAGTCAAAGCGAAAGCC+AGG | - | chr8_1:83172553-83172572 | None:intergenic | 45.0% | |
| !!! | GGACTTTTTGAGACAGTTGG+AGG | - | chr8_1:83172660-83172679 | None:intergenic | 45.0% |
| TGCTTCACACACAATCCTTG+GGG | + | chr8_1:83172965-83172984 | Msa1220160:intron | 45.0% | |
| ! | CATCGATAAGGCTGGATTAG+CGG | - | chr8_1:83173109-83173128 | None:intergenic | 45.0% |
| GCAAAGCAAAAACAACCTCC+TGG | - | chr8_1:83173374-83173393 | None:intergenic | 45.0% | |
| GCAATCAGAGATACCAGCAA+TGG | - | chr8_1:83173617-83173636 | None:intergenic | 45.0% | |
| AACACAAACCTGGTTCCTGT+TGG | - | chr8_1:83173724-83173743 | None:intergenic | 45.0% | |
| AGCTCCATCTCATTCCAGTA+AGG | - | chr8_1:83174049-83174068 | None:intergenic | 45.0% | |
| CTTGGCAGTTGTGGTATTGT+TGG | - | chr8_1:83174140-83174159 | None:intergenic | 45.0% | |
| TCTTTCTGTCTTGGCAGTTG+TGG | - | chr8_1:83174149-83174168 | None:intergenic | 45.0% | |
| CTACAAGAGCTGCGTGATAA+GGG | - | chr8_1:83174190-83174209 | None:intergenic | 45.0% | |
| ! | GTATGAATGCACAGAAGTGC+AGG | + | chr8_1:83174241-83174260 | Msa1220160:CDS | 45.0% |
| ATCTGTAGGAACACCAAAGC+TGG | - | chr8_1:83174480-83174499 | None:intergenic | 45.0% | |
| !! | GCTTTGGTGTTCCTACAGAT+TGG | + | chr8_1:83174480-83174499 | Msa1220160:intron | 45.0% |
| CTACAGATTGGAGCTGCAAA+GGG | + | chr8_1:83174492-83174511 | Msa1220160:intron | 45.0% | |
| TACAGATTGGAGCTGCAAAG+GGG | + | chr8_1:83174493-83174512 | Msa1220160:intron | 45.0% | |
| AGCTGCAAAGGGGTTTCTTT+CGG | + | chr8_1:83174503-83174522 | Msa1220160:intron | 45.0% | |
| !! | TTCGGTGTTGAGGTCTTATC+TGG | + | chr8_1:83174521-83174540 | Msa1220160:intron | 45.0% |
| GGCTTTGCTTTACGCTATAG+TGG | + | chr8_1:83175093-83175112 | Msa1220160:intron | 45.0% | |
| ! | ACTTTGCATTTCTAGGAGGC+TGG | - | chr8_1:83175265-83175284 | None:intergenic | 45.0% |
| AATCAGAAAGGCAAGTGGCA+CGG | - | chr8_1:83175534-83175553 | None:intergenic | 45.0% | |
| !! | TAAGCTTGTTGCAGAGGCTT+GGG | + | chr8_1:83176051-83176070 | Msa1220160:intron | 45.0% |
| TGCACTAGAAGGCTACTTCA+AGG | + | chr8_1:83176186-83176205 | Msa1220160:intron | 45.0% | |
| CGTCCTCTCTTCTGTACAAA+AGG | + | chr8_1:83176471-83176490 | Msa1220160:intron | 45.0% | |
| AGGCTATCATGCTTTGCCAT+GGG | + | chr8_1:83176755-83176774 | Msa1220160:intron | 45.0% | |
| AGTTAACCCTTCAATGCGCA+GGG | - | chr8_1:83177013-83177032 | None:intergenic | 45.0% | |
| AAGTTAACCCTTCAATGCGC+AGG | - | chr8_1:83177014-83177033 | None:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr8_1:83177528-83177547 | Msa1220160:intron | 45.0% | |
| !! | AATAAAAATTAAATAGTAAA+AGG | + | chr8_1:83176670-83176689 | Msa1220160:intron | 5.0% |
| CGAGGTCTTAGTAGACTCGA+TGG | + | chr8_1:83170521-83170540 | Msa1220160:five_prime_UTR | 50.0% | |
| ! | AACGGGGAGTATGTGAAGAC+AGG | + | chr8_1:83171684-83171703 | Msa1220160:CDS | 50.0% |
| TAGGCAAGCAGTTGGATTCC+TGG | + | chr8_1:83171859-83171878 | Msa1220160:CDS | 50.0% | |
| CTGCGGAGACCAATCAATGA+GGG | - | chr8_1:83172478-83172497 | None:intergenic | 50.0% | |
| ACTGCGGAGACCAATCAATG+AGG | - | chr8_1:83172479-83172498 | None:intergenic | 50.0% | |
| CTGAAGCAGAAAGGATTCCC+TGG | - | chr8_1:83173072-83173091 | None:intergenic | 50.0% | |
| ! | CGCTAATCCAGCCTTATCGA+TGG | + | chr8_1:83173107-83173126 | Msa1220160:intron | 50.0% |
| AGCAGGCTTTGCCATCGATA+AGG | - | chr8_1:83173121-83173140 | None:intergenic | 50.0% | |
| GCATGTCATTCGGCAAAACC+TGG | - | chr8_1:83173253-83173272 | None:intergenic | 50.0% | |
| ACTCTTGAAGTCAGTCCAGG+AGG | + | chr8_1:83173356-83173375 | Msa1220160:intron | 50.0% | |
| CCTACAAGAGCTGCGTGATA+AGG | - | chr8_1:83174191-83174210 | None:intergenic | 50.0% | |
| CCTTATCACGCAGCTCTTGT+AGG | + | chr8_1:83174188-83174207 | Msa1220160:CDS | 50.0% | |
| CCTTTGCAGCTCCAATCTGT+AGG | - | chr8_1:83174494-83174513 | None:intergenic | 50.0% | |
| CCTACAGATTGGAGCTGCAA+AGG | + | chr8_1:83174491-83174510 | Msa1220160:intron | 50.0% | |
| !! | AGGGGTTTCTTTCGGTGTTG+AGG | + | chr8_1:83174511-83174530 | Msa1220160:intron | 50.0% |
| GGGAGTCTAGTTGCCATAGT+TGG | + | chr8_1:83175192-83175211 | Msa1220160:intron | 50.0% | |
| ATGAAAGGCCGATCGCGATA+CGG | - | chr8_1:83175752-83175771 | None:intergenic | 50.0% | |
| !! | GTCTCCTAAGCTTGTTGCAG+AGG | + | chr8_1:83176045-83176064 | Msa1220160:intron | 50.0% |
| CAAGCCTCTGCAACAAGCTT+AGG | - | chr8_1:83176052-83176071 | None:intergenic | 50.0% | |
| !! | CTAAGCTTGTTGCAGAGGCT+TGG | + | chr8_1:83176050-83176069 | Msa1220160:intron | 50.0% |
| TTGTTGCAGAGGCTTGGGAA+TGG | + | chr8_1:83176056-83176075 | Msa1220160:intron | 50.0% | |
| GAGGCTATCATGCTTTGCCA+TGG | + | chr8_1:83176754-83176773 | Msa1220160:intron | 50.0% | |
| ACTTTCCCCTGCGCATTGAA+GGG | + | chr8_1:83177004-83177023 | Msa1220160:intron | 50.0% | |
| GTTAACCCTTCAATGCGCAG+GGG | - | chr8_1:83177012-83177031 | None:intergenic | 50.0% | |
| TCGTAGAACCCGATTGAGCA+TGG | - | chr8_1:83177147-83177166 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8_1:83177336-83177355 | None:intergenic | 50.0% | |
| !! | AAGATTTTGGCCCCCCCAAT+TGG | + | chr8_1:83177693-83177712 | Msa1220160:intron | 50.0% |
| GGTCCAAGGTGTAACAGTTG+TGG | + | chr8_1:83177847-83177866 | Msa1220160:CDS | 50.0% | |
| !! | ACCTCACCAGCCGGTTTTGT+GGG | + | chr8_1:83170818-83170837 | Msa1220160:intron | 55.0% |
| ACACAACCCACAAAACCGGC+TGG | - | chr8_1:83170827-83170846 | None:intergenic | 55.0% | |
| AAACCTTGACGGGAGGTCCT+TGG | - | chr8_1:83171289-83171308 | None:intergenic | 55.0% | |
| ATGGTGCATCGAGGCAACAG+AGG | + | chr8_1:83171725-83171744 | Msa1220160:CDS | 55.0% | |
| !! | ACGCGGCTTCTGATTTGCTG+TGG | + | chr8_1:83172401-83172420 | Msa1220160:intron | 55.0% |
| !! | CGCGGCTTCTGATTTGCTGT+GGG | + | chr8_1:83172402-83172421 | Msa1220160:intron | 55.0% |
| GGCTTTGCCATCGATAAGGC+TGG | - | chr8_1:83173117-83173136 | None:intergenic | 55.0% | |
| ! | GGTTGATGCCAACAGGAACC+AGG | + | chr8_1:83173713-83173732 | Msa1220160:CDS | 55.0% |
| ! | TGCATTTCTAGGAGGCTGGC+TGG | - | chr8_1:83175261-83175280 | None:intergenic | 55.0% |
| GCTCATTCCCGTATCGCGAT+CGG | + | chr8_1:83175741-83175760 | Msa1220160:CDS | 55.0% | |
| TGAAAGGCCGATCGCGATAC+GGG | - | chr8_1:83175751-83175770 | None:intergenic | 55.0% | |
| TCGCGATCGGCCTTTCATGA+AGG | + | chr8_1:83175754-83175773 | Msa1220160:CDS | 55.0% | |
| CTTCAATGCGCAGGGGAAAG+TGG | - | chr8_1:83177005-83177024 | None:intergenic | 55.0% | |
| CACTTTCCCCTGCGCATTGA+AGG | + | chr8_1:83177003-83177022 | Msa1220160:intron | 55.0% | |
| !! | AAAAGGTACTCCCTCCGTCC+CGG | + | chr8_1:83177319-83177338 | Msa1220160:intron | 55.0% |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8_1:83177332-83177351 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr8_1:83177531-83177550 | Msa1220160:intron | 55.0% | |
| GGACTGAAGAGTGAAGAGCG+TGG | + | chr8_1:83177826-83177845 | Msa1220160:CDS | 55.0% | |
| ! | AGAGTGAAGAGCGTGGTCCA+AGG | + | chr8_1:83177833-83177852 | Msa1220160:CDS | 55.0% |
| CAAAACCGGCTGGTGAGGTG+AGG | - | chr8_1:83170817-83170836 | None:intergenic | 60.0% | |
| !! | CACCTCACCAGCCGGTTTTG+TGG | + | chr8_1:83170817-83170836 | Msa1220160:intron | 60.0% |
| ACCCACAAAACCGGCTGGTG+AGG | - | chr8_1:83170822-83170841 | None:intergenic | 60.0% | |
| ! | AGGGCGCTCACATGCTAACG+CGG | + | chr8_1:83171315-83171334 | Msa1220160:CDS | 60.0% |
| GTGCATCGAGGCAACAGAGG+AGG | + | chr8_1:83171728-83171747 | Msa1220160:CDS | 60.0% | |
| !! | TACAGTACACTGGCTCGGCG+TGG | + | chr8_1:83171819-83171838 | Msa1220160:intron | 60.0% |
| !! | ACAGTACACTGGCTCGGCGT+GGG | + | chr8_1:83171820-83171839 | Msa1220160:intron | 60.0% |
| TGCGCAGGGGAAAGTGGTCT+TGG | - | chr8_1:83176999-83177018 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8_1:83177333-83177352 | None:intergenic | 60.0% | |
| GCGATCCTCACCTCACCAGC+CGG | + | chr8_1:83170809-83170828 | Msa1220160:intron | 65.0% | |
| GCTCCAAGGACCTCCCGTCA+AGG | + | chr8_1:83171283-83171302 | Msa1220160:CDS | 65.0% | |
| !! | GTACACTGGCTCGGCGTGGG+AGG | + | chr8_1:83171823-83171842 | Msa1220160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 83170521 | 83177900 | 83170521 | ID=Msa1220160;Name=Msa1220160 |
| chr8_1 | mRNA | 83170521 | 83177900 | 83170521 | ID=Msa1220160-mRNA-1;Parent=Msa1220160;Name=Msa1220160-mRNA-1;_AED=0.28;_eAED=0.28;_QI=102|0.3|0.18|0.45|0.8|0.81|11|0|330 |
| chr8_1 | exon | 83170521 | 83170679 | 83170521 | ID=Msa1220160-mRNA-1:exon:29787;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83171283 | 83171420 | 83171283 | ID=Msa1220160-mRNA-1:exon:29788;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83171494 | 83171564 | 83171494 | ID=Msa1220160-mRNA-1:exon:29789;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83171614 | 83171749 | 83171614 | ID=Msa1220160-mRNA-1:exon:29790;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83171824 | 83171880 | 83171824 | ID=Msa1220160-mRNA-1:exon:29791;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83172281 | 83172343 | 83172281 | ID=Msa1220160-mRNA-1:exon:29792;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83173657 | 83173734 | 83173657 | ID=Msa1220160-mRNA-1:exon:29793;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83174128 | 83174262 | 83174128 | ID=Msa1220160-mRNA-1:exon:29794;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83175710 | 83175775 | 83175710 | ID=Msa1220160-mRNA-1:exon:29795;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83177142 | 83177201 | 83177142 | ID=Msa1220160-mRNA-1:exon:29796;Parent=Msa1220160-mRNA-1 |
| chr8_1 | exon | 83177772 | 83177900 | 83177772 | ID=Msa1220160-mRNA-1:exon:29797;Parent=Msa1220160-mRNA-1 |
| chr8_1 | five_prime_UTR | 83170521 | 83170622 | 83170521 | ID=Msa1220160-mRNA-1:five_prime_utr;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83170623 | 83170679 | 83170623 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83171283 | 83171420 | 83171283 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83171494 | 83171564 | 83171494 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83171614 | 83171749 | 83171614 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83171824 | 83171880 | 83171824 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83172281 | 83172343 | 83172281 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83173657 | 83173734 | 83173657 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83174128 | 83174262 | 83174128 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83175710 | 83175775 | 83175710 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83177142 | 83177201 | 83177142 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| chr8_1 | CDS | 83177772 | 83177900 | 83177772 | ID=Msa1220160-mRNA-1:cds;Parent=Msa1220160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
