AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1220640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 148 sgRNAs with CRISPR-Local

Find 533 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAATTTCTAATCCTTTA+AGG 0.080010 8_1:-83852579 None:intergenic
ATTCGATGCGTTTGAATAAT+TGG 0.099376 8_1:+83849022 Msa1220640:three_prime_UTR
GGTTATGGTATTTACCTTAA+AGG 0.177209 8_1:+83852565 Msa1220640:three_prime_UTR
ACCTTGAAATATCTTAATTT+TGG 0.179064 8_1:-83845744 None:intergenic
ATAGAACTTGGTTTGTAAAA+AGG 0.186622 8_1:+83849881 Msa1220640:three_prime_UTR
TCCTTTCACTTGCTTGATTA+TGG 0.188734 8_1:-83849358 None:intergenic
ATGGAGCCACCTTCTTAATT+AGG 0.197808 8_1:-83849567 None:intergenic
CAGGAAAGTTTGGCCAAATT+TGG 0.203592 8_1:-83844550 None:intergenic
GCAAATAGGGTTGAAGTTTC+AGG 0.208241 8_1:+83849098 Msa1220640:three_prime_UTR
TTTACATATGGGTGGGTATA+TGG 0.239975 8_1:+83852496 Msa1220640:three_prime_UTR
CTGCTGCTCTTGCAGATTCT+AGG 0.253509 8_1:+83846747 Msa1220640:three_prime_UTR
ATCTGGAAAATCGGCTTATA+TGG 0.256003 8_1:-83845265 None:intergenic
CAAAAGATAATAGCCAAATT+TGG 0.257356 8_1:+83844537 Msa1220640:CDS
TGATAAATGTAATTCTTAAA+TGG 0.257696 8_1:+83852544 Msa1220640:three_prime_UTR
TCACAGCACGTCTCAAATTC+CGG 0.272755 8_1:-83849609 None:intergenic
AGTGACTGGCATAATTTCTT+TGG 0.279779 8_1:+83850045 Msa1220640:three_prime_UTR
CCTTCAGGTTCTCAGGCTTT+GGG 0.301642 8_1:+83844958 Msa1220640:intron
ATGTAATTCTTAAATGGTTA+TGG 0.312875 8_1:+83852550 Msa1220640:three_prime_UTR
GAACAAGCAATCTCTATTAC+TGG 0.314740 8_1:+83846974 Msa1220640:three_prime_UTR
CGTGAAATACAAGATGGATT+TGG 0.319576 8_1:+83848965 Msa1220640:three_prime_UTR
TTCTGTTGTGGCATGGATCT+TGG 0.322514 8_1:-83845148 None:intergenic
TGAAGGATTTCGTGATAGTT+TGG 0.325522 8_1:+83849629 Msa1220640:three_prime_UTR
GTGGACGGGTACTTGCAAAT+AGG 0.338878 8_1:+83849084 Msa1220640:three_prime_UTR
ATCGGTACTTTCTGTGCCTT+TGG 0.339368 8_1:+83844749 Msa1220640:CDS
TTGTGCTCTTCATGTGGGAT+TGG 0.339462 8_1:+83844616 Msa1220640:CDS
AAACACCTTAATCAACAAAA+AGG 0.353161 8_1:+83852312 Msa1220640:three_prime_UTR
GCCAAAATTAAGATATTTCA+AGG 0.354103 8_1:+83845743 Msa1220640:three_prime_UTR
CGGAGATGTACAGGAAAGTT+TGG 0.354907 8_1:-83844560 None:intergenic
ACAAACAATTTGGTATGAAC+TGG 0.355757 8_1:+83849968 Msa1220640:three_prime_UTR
AGCATATGAACTCGATTTAC+CGG 0.358106 8_1:-83848995 None:intergenic
TCCCAAGACAGAAGCATTGC+TGG 0.359334 8_1:-83849538 None:intergenic
ATAGAGATTGCTTGTTCATA+AGG 0.365729 8_1:-83846968 None:intergenic
GGTCTTCCCAAGCAGGATTT+CGG 0.367091 8_1:+83848934 Msa1220640:three_prime_UTR
GTGAAATACAAGATGGATTT+GGG 0.368331 8_1:+83848966 Msa1220640:three_prime_UTR
CACAGCACGTCTCAAATTCC+GGG 0.373784 8_1:-83849608 None:intergenic
CATACCCAGCACAGGTGCTT+TGG 0.374973 8_1:-83849670 None:intergenic
ATTGTTTGTAAAGTTCTTAG+TGG 0.377003 8_1:+83852595 Msa1220640:three_prime_UTR
TCCAGCAATGCTTCTGTCTT+GGG 0.382596 8_1:+83849537 Msa1220640:three_prime_UTR
GCTGATTACGACTATTTAGT+TGG 0.384883 8_1:+83845338 Msa1220640:three_prime_UTR
TTGGTCTTCATCTGGAAAAT+CGG 0.387074 8_1:-83845274 None:intergenic
ATGAAGATTGATGTAGCTTC+TGG 0.387263 8_1:+83845308 Msa1220640:three_prime_UTR
TGTGCTCTTCATGTGGGATT+GGG 0.392277 8_1:+83844617 Msa1220640:CDS
GACAGAACGCGTTGAATATC+TGG 0.395423 8_1:+83848913 Msa1220640:three_prime_UTR
TGCGTTTGAATAATTGGATT+GGG 0.403885 8_1:+83849028 Msa1220640:three_prime_UTR
TATGCACCTTGGTCTTCATC+TGG 0.408279 8_1:-83845282 None:intergenic
TCCTTGCCGAAATCCTGCTT+GGG 0.412002 8_1:-83848940 None:intergenic
TTTCAAAAGAAGTTAGTTGA+AGG 0.414678 8_1:+83845188 Msa1220640:CDS
TGGACGGGTACTTGCAAATA+GGG 0.414679 8_1:+83849085 Msa1220640:three_prime_UTR
TTCCTTGCCGAAATCCTGCT+TGG 0.428312 8_1:-83848941 None:intergenic
GGAGCATTTATTCTGTTAAG+TGG 0.428647 8_1:-83852354 None:intergenic
TTGATCTTGAGGACAAAATC+CGG 0.430778 8_1:-83848883 None:intergenic
TAGCTCCAAAGCACCTGTGC+TGG 0.431933 8_1:+83849665 Msa1220640:three_prime_UTR
GTACTGGCTGTGTTTGTGTC+AGG 0.432071 8_1:+83844819 Msa1220640:CDS
AAAATTACAAAACAGTTAGA+TGG 0.434531 8_1:+83852188 Msa1220640:three_prime_UTR
GTCCAGCAATGCTTCTGTCT+TGG 0.435488 8_1:+83849536 Msa1220640:three_prime_UTR
GGTTCTATGTTGATTACAAT+TGG 0.435872 8_1:+83847307 Msa1220640:three_prime_UTR
AGCCACCTTCTTAATTAGGT+TGG 0.442477 8_1:-83849563 None:intergenic
GAATCTTCTAATCTCATTGT+TGG 0.444807 8_1:+83846773 Msa1220640:three_prime_UTR
GATTACAATTGGTGGACATA+TGG 0.447706 8_1:+83847318 Msa1220640:three_prime_UTR
TAATAATCTGCAGAAATTGA+TGG 0.449075 8_1:+83845679 Msa1220640:three_prime_UTR
ATGCGTTTGAATAATTGGAT+TGG 0.454737 8_1:+83849027 Msa1220640:three_prime_UTR
ATTAAGGTGTTTAATTATCT+CGG 0.456197 8_1:-83852301 None:intergenic
GCTTTATCTGTGTCAAAGAC+TGG 0.458792 8_1:+83844702 Msa1220640:CDS
AAAATTGAGTGTGAGTTGTT+TGG 0.460415 8_1:+83845647 Msa1220640:three_prime_UTR
AATAATCTGCAGAAATTGAT+GGG 0.464460 8_1:+83845680 Msa1220640:three_prime_UTR
AAAACACAAGATTGGGATGT+AGG 0.467669 8_1:-83844782 None:intergenic
CGTTTACGTCGCATTGGAAG+TGG 0.471988 8_1:+83846938 Msa1220640:three_prime_UTR
GGTACTTTCTGTGCCTTTGG+AGG 0.478959 8_1:+83844752 Msa1220640:CDS
TTCGTGATAGTTTGGAGAGA+GGG 0.479385 8_1:+83849637 Msa1220640:three_prime_UTR
AATATCTGGTCTTCCCAAGC+AGG 0.480780 8_1:+83848927 Msa1220640:three_prime_UTR
TTGCTTGATCAGAAAACAGT+TGG 0.480919 8_1:-83844986 None:intergenic
TTGAAATAATAAGACCTCTC+AGG 0.482785 8_1:-83852651 None:intergenic
TAACATAAGAAGTGGGAGAT+GGG 0.489562 8_1:+83849280 Msa1220640:intron
CTGATGCACATAATAGAACT+TGG 0.489931 8_1:+83849869 Msa1220640:three_prime_UTR
TTGACTTTATCTTAAGTGAC+TGG 0.490947 8_1:+83850031 Msa1220640:three_prime_UTR
CTACACTCCAGCATTCAGTC+AGG 0.491182 8_1:+83852445 Msa1220640:three_prime_UTR
TGTAGGATTGTGATAGATGT+TGG 0.494047 8_1:+83848859 Msa1220640:three_prime_UTR
CCTTCATGAAATGCTGCCAT+TGG 0.494059 8_1:+83847351 Msa1220640:three_prime_UTR
GGTATAAAAGTTCGCTAAAG+AGG 0.496604 8_1:+83849514 Msa1220640:three_prime_UTR
ACTAAAACATTGCAGGTTGT+GGG 0.498362 8_1:+83849790 Msa1220640:intron
TGTCACTGACAAAACATTGC+AGG 0.505399 8_1:+83849402 Msa1220640:three_prime_UTR
TGTCTCAAATGTTGATCTTG+AGG 0.507245 8_1:-83848894 None:intergenic
TAGAGATTGCTTGTTCATAA+GGG 0.507311 8_1:-83846967 None:intergenic
GTATGAACTGGATTTATACA+AGG 0.513675 8_1:+83849980 Msa1220640:three_prime_UTR
TGCTTGATCAGAAAACAGTT+GGG 0.516664 8_1:-83844985 None:intergenic
AGCTCCAAAGCACCTGTGCT+GGG 0.519232 8_1:+83849666 Msa1220640:three_prime_UTR
ATTCAATTTCTTTATAAGAG+AGG 0.520657 8_1:-83852411 None:intergenic
TGTTGTCTTCAAATCGCGTA+AGG 0.531554 8_1:+83845768 Msa1220640:three_prime_UTR
TGCTCTTGCAGATTCTAGGC+TGG 0.533759 8_1:+83846751 Msa1220640:three_prime_UTR
ATCTGTTGTGCTCTTCATGT+GGG 0.534876 8_1:+83844611 Msa1220640:CDS
GGAATCCAACCTAATTAAGA+AGG 0.535073 8_1:+83849558 Msa1220640:three_prime_UTR
CAAAATTGCATACCCAGCAC+AGG 0.535610 8_1:-83849678 None:intergenic
TGTTTGAGTTAACCGATGAC+AGG 0.537207 8_1:+83845519 Msa1220640:three_prime_UTR
TGAAAACGTTTACGTCGCAT+TGG 0.541301 8_1:+83846932 Msa1220640:three_prime_UTR
ATAATAAGACCTCTCAGGTA+TGG 0.542049 8_1:-83852646 None:intergenic
GAATTTGAGACGTGCTGTGA+AGG 0.543445 8_1:+83849612 Msa1220640:three_prime_UTR
AAAGAAGTTAGTTGAAGGAG+AGG 0.543921 8_1:+83845193 Msa1220640:exon
AGGAAGCATGTCCACTGTTG+TGG 0.545522 8_1:+83849377 Msa1220640:three_prime_UTR
GATTGTGATAGATGTTGGCC+CGG 0.547116 8_1:+83848864 Msa1220640:three_prime_UTR
ACCATAATCAAGCAAGTGAA+AGG 0.550084 8_1:+83849357 Msa1220640:three_prime_UTR
TAGCTACCCTGACTGAATGC+TGG 0.551186 8_1:-83852452 None:intergenic
TTAACTTCTATTCAGAAGAG+AGG 0.551939 8_1:+83847231 Msa1220640:three_prime_UTR
GGAAAATCGGCTTATATGGA+TGG 0.553442 8_1:-83845261 None:intergenic
ACTGCATTTGAAGACCTGTA+TGG 0.558317 8_1:-83849312 None:intergenic
TCTATGTTGATTACAATTGG+TGG 0.560581 8_1:+83847310 Msa1220640:three_prime_UTR
CAAGATGAAGACCAAGGTGC+TGG 0.561331 8_1:+83845220 Msa1220640:three_prime_UTR
ACAAAGAGCAATGAGTGGAC+AGG 0.568381 8_1:+83846806 Msa1220640:three_prime_UTR
AGGAAACGTGAAATACAAGA+TGG 0.571470 8_1:+83848959 Msa1220640:three_prime_UTR
GATCTGTTGTGCTCTTCATG+TGG 0.572556 8_1:+83844610 Msa1220640:CDS
GTAACATAAGAAGTGGGAGA+TGG 0.572785 8_1:+83849279 Msa1220640:intron
TAACTCAAACACAAACATCA+AGG 0.574014 8_1:-83845507 None:intergenic
TATATGGATGGAGCATAGTA+CGG 0.576323 8_1:-83845249 None:intergenic
AACATAAGAAGTGGGAGATG+GGG 0.577503 8_1:+83849281 Msa1220640:intron
CCAATGGCAGCATTTCATGA+AGG 0.577901 8_1:-83847351 None:intergenic
AACAAGCAATCTCTATTACT+GGG 0.579918 8_1:+83846975 Msa1220640:three_prime_UTR
AGAGTATATCAGGGATGGAA+AGG 0.581558 8_1:+83845481 Msa1220640:intron
TTTAAATGAGTACCTGTCAT+CGG 0.581778 8_1:-83845531 None:intergenic
GATGGTTCTTATAGATGATG+AGG 0.582262 8_1:+83845019 Msa1220640:CDS
ATAAGACCTCTCAGGTATGG+TGG 0.588796 8_1:-83852643 None:intergenic
TGATCTTGAGGACAAAATCC+GGG 0.599226 8_1:-83848882 None:intergenic
ATCTTCATTACTATGCACCT+TGG 0.600595 8_1:-83845293 None:intergenic
GGAAGCATGTCCACTGTTGT+GGG 0.601159 8_1:+83849378 Msa1220640:three_prime_UTR
CAATGGCAGCATTTCATGAA+GGG 0.605042 8_1:-83847350 None:intergenic
TTGATGGGGAAGTCTACTGA+TGG 0.605407 8_1:+83845695 Msa1220640:three_prime_UTR
TCAAGCAAACTCAATTGAGA+TGG 0.605515 8_1:+83845001 Msa1220640:CDS
TGAGTAGACAACAAAAGATG+TGG 0.606306 8_1:-83849836 None:intergenic
TCGTGATAGTTTGGAGAGAG+GGG 0.607888 8_1:+83849638 Msa1220640:three_prime_UTR
TACGGTATGCACCAGCACCT+TGG 0.619060 8_1:-83845231 None:intergenic
TTTCGTGATAGTTTGGAGAG+AGG 0.622222 8_1:+83849636 Msa1220640:three_prime_UTR
ACATAAGAAGTGGGAGATGG+GGG 0.622525 8_1:+83849282 Msa1220640:intron
TCCCAAGCAGGATTTCGGCA+AGG 0.624946 8_1:+83848939 Msa1220640:three_prime_UTR
ATCCAACCTAATTAAGAAGG+TGG 0.628521 8_1:+83849561 Msa1220640:three_prime_UTR
ATTTCACAAAGAGCAATGAG+TGG 0.643663 8_1:+83846801 Msa1220640:three_prime_UTR
CTCTGTGGATAAGTGACGCG+AGG 0.643850 8_1:-83852375 None:intergenic
TACACTCCAGCATTCAGTCA+GGG 0.650026 8_1:+83852446 Msa1220640:three_prime_UTR
CCAACATGATCAAAAGCCAA+TGG 0.652012 8_1:-83847367 None:intergenic
CTTATTCCACCATACCTGAG+AGG 0.655666 8_1:+83852637 Msa1220640:three_prime_UTR
TGTAGGAAGATCTCCTCCAA+AGG 0.658069 8_1:-83844765 None:intergenic
TCAGAAGAGAGGTCATGCAA+TGG 0.662275 8_1:+83847242 Msa1220640:three_prime_UTR
AGATGGATTTGGGAGGACGC+CGG 0.663275 8_1:+83848976 Msa1220640:three_prime_UTR
TATGGTGGAATAAGACAATG+TGG 0.670263 8_1:-83852628 None:intergenic
TCAGTGACAACCCACAACAG+TGG 0.676516 8_1:-83849388 None:intergenic
ATAATCTGCAGAAATTGATG+GGG 0.677044 8_1:+83845681 Msa1220640:three_prime_UTR
GGTATGACATCGGAACTCTG+TGG 0.706737 8_1:-83852390 None:intergenic
AAATACAAGATGGATTTGGG+AGG 0.709264 8_1:+83848969 Msa1220640:three_prime_UTR
TTATAAGAGAGGTATGACAT+CGG 0.711013 8_1:-83852400 None:intergenic
GGTCTACAAGATGAAGACCA+AGG 0.728411 8_1:+83845214 Msa1220640:three_prime_UTR
ATGCAGTGCAGAGTGATACG+AGG 0.732133 8_1:+83849328 Msa1220640:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATACATTAAAAAAATCA+AGG - chr8_1:83845395-83845414 None:intergenic 10.0%
!!! TTTAAATATTCTATTTTTAG+TGG + chr8_1:83845548-83845567 Msa1220640:intron 10.0%
!!! TTAAATATTCTATTTTTAGT+GGG + chr8_1:83845549-83845568 Msa1220640:intron 10.0%
!! AAAAAAAAAACTATAACAAA+CGG - chr8_1:83846222-83846241 None:intergenic 10.0%
!!! CATTTTGTTATAATTTTTTT+TGG + chr8_1:83846369-83846388 Msa1220640:intron 10.0%
!! TAAAAAAAAAAATATCACTA+TGG + chr8_1:83850828-83850847 Msa1220640:intron 10.0%
!! AAAAAAAAAAATATCACTAT+GGG + chr8_1:83850829-83850848 Msa1220640:intron 10.0%
!! AAAAAAAAACTATAACAAAC+GGG - chr8_1:83846221-83846240 None:intergenic 15.0%
!!! ATTTCTAAAAATGGATTTTT+TGG - chr8_1:83846608-83846627 None:intergenic 15.0%
!!! TTTCTTTGTATTTCTAAAAA+TGG - chr8_1:83846617-83846636 None:intergenic 15.0%
!!! TGTTTTAAATCTAAAACAAA+CGG + chr8_1:83846645-83846664 Msa1220640:intron 15.0%
!! TAGATAAAGTTTAAAAAACA+TGG - chr8_1:83847111-83847130 None:intergenic 15.0%
!! AATAAAATATGAAACATTCA+TGG + chr8_1:83847446-83847465 Msa1220640:intron 15.0%
!!! ACTATCTTATTGATTAATTA+AGG - chr8_1:83848075-83848094 None:intergenic 15.0%
!!! ATTGATTCTTAATTAATTGT+AGG + chr8_1:83848110-83848129 Msa1220640:intron 15.0%
!! AACAAATAAATGTATCAAAA+AGG - chr8_1:83848313-83848332 None:intergenic 15.0%
!! TAGATAAAATTCAAATGAAA+GGG - chr8_1:83848342-83848361 None:intergenic 15.0%
!! ATAGATAAAATTCAAATGAA+AGG - chr8_1:83848343-83848362 None:intergenic 15.0%
!! AATGAAAAAGAGAAAAAATT+TGG - chr8_1:83848421-83848440 None:intergenic 15.0%
!! AAAATCCAATTAAAAATAGA+GGG - chr8_1:83848487-83848506 None:intergenic 15.0%
!! AAAAATCCAATTAAAAATAG+AGG - chr8_1:83848488-83848507 None:intergenic 15.0%
!! AAAATTAATTAGAAATAGAG+GGG - chr8_1:83848727-83848746 None:intergenic 15.0%
!! CAAAATTAATTAGAAATAGA+GGG - chr8_1:83848728-83848747 None:intergenic 15.0%
!! ACAAAATTAATTAGAAATAG+AGG - chr8_1:83848729-83848748 None:intergenic 15.0%
!!! TTCAAATTTTACAAACAATT+TGG + chr8_1:83849958-83849977 Msa1220640:three_prime_UTR 15.0%
!! TAAAGGAAAAAAGAATAAAT+CGG + chr8_1:83850133-83850152 Msa1220640:intron 15.0%
!!! AGAAAGTATATTATTAACTA+AGG + chr8_1:83850754-83850773 Msa1220640:intron 15.0%
!!! GAAAGTATATTATTAACTAA+GGG + chr8_1:83850755-83850774 Msa1220640:intron 15.0%
!! AAAGTATATTATTAACTAAG+GGG + chr8_1:83850756-83850775 Msa1220640:intron 15.0%
!!! GTAAGAAAGTATAAAAAAAA+AGG + chr8_1:83850780-83850799 Msa1220640:intron 15.0%
!!! TGTAAAGTGAAAATATATTT+TGG - chr8_1:83851706-83851725 None:intergenic 15.0%
!! TCATTTGTAAATAAGTAAAT+AGG + chr8_1:83851905-83851924 Msa1220640:intron 15.0%
!!! TGTTGTATTTTATTTACATA+TGG + chr8_1:83852484-83852503 Msa1220640:three_prime_UTR 15.0%
!!! GTTGTATTTTATTTACATAT+GGG + chr8_1:83852485-83852504 Msa1220640:three_prime_UTR 15.0%
!! TGATAAATGTAATTCTTAAA+TGG + chr8_1:83852544-83852563 Msa1220640:three_prime_UTR 15.0%
!!! AGGTTTTTTTTGTGTAATTT+TGG + chr8_1:83844669-83844688 Msa1220640:intron 20.0%
!!! CAATTGTTTTTTGTCTTTAT+CGG + chr8_1:83844731-83844750 Msa1220640:CDS 20.0%
!! TAAAAACAAAACACAAGATT+GGG - chr8_1:83844792-83844811 None:intergenic 20.0%
!! ATAAAAACAAAACACAAGAT+TGG - chr8_1:83844793-83844812 None:intergenic 20.0%
!! AACAATCTATAACTAACAAA+GGG - chr8_1:83845055-83845074 None:intergenic 20.0%
!!! AAGAAAAGTTTTTACAAACA+TGG + chr8_1:83845362-83845381 Msa1220640:intron 20.0%
!!! ACCTTGAAATATCTTAATTT+TGG - chr8_1:83845747-83845766 None:intergenic 20.0%
!!! TTTTGAATACTTTGCATATA+AGG + chr8_1:83845832-83845851 Msa1220640:intron 20.0%
!!! GAAATAATTTTAAGCTCATT+TGG - chr8_1:83846565-83846584 None:intergenic 20.0%
!!! GTTTTAAATCTAAAACAAAC+GGG + chr8_1:83846646-83846665 Msa1220640:intron 20.0%
!! TAACTAATGTGAAAATATTG+GGG - chr8_1:83847407-83847426 None:intergenic 20.0%
!! CTAACTAATGTGAAAATATT+GGG - chr8_1:83847408-83847427 None:intergenic 20.0%
!! TCTAACTAATGTGAAAATAT+TGG - chr8_1:83847409-83847428 None:intergenic 20.0%
!! TTCCAATATTAAGAAAAGAA+GGG - chr8_1:83847612-83847631 None:intergenic 20.0%
!! ATTCCAATATTAAGAAAAGA+AGG - chr8_1:83847613-83847632 None:intergenic 20.0%
!! AAAATTACCATCTATGATTT+AGG - chr8_1:83847825-83847844 None:intergenic 20.0%
!! AGATAAAATTCAAATGAAAG+GGG - chr8_1:83848341-83848360 None:intergenic 20.0%
!! AAAGAGAAAAAATTTGGATA+CGG - chr8_1:83848415-83848434 None:intergenic 20.0%
!! AAATTAATTAGAAATAGAGG+GGG - chr8_1:83848726-83848745 None:intergenic 20.0%
!!! TACAAAACTGAATCATTTTT+TGG - chr8_1:83848843-83848862 None:intergenic 20.0%
!!! AAAAAATGATTCAGTTTTGT+AGG + chr8_1:83848842-83848861 Msa1220640:intron 20.0%
!! GTTTAGAAAATTCTAATCAA+TGG + chr8_1:83849236-83849255 Msa1220640:intron 20.0%
!!! GTTGAAAATTTCTGAAAAAA+TGG - chr8_1:83849589-83849608 None:intergenic 20.0%
!!! GATCATATTTTGAGAAAATT+GGG + chr8_1:83849812-83849831 Msa1220640:three_prime_UTR 20.0%
!! GTATAGAACAGAATAAATAA+AGG + chr8_1:83850116-83850135 Msa1220640:intron 20.0%
!! AAAGGAAAAAAGAATAAATC+GGG + chr8_1:83850134-83850153 Msa1220640:intron 20.0%
!! AGTAAAGTCAAATATATAGA+CGG - chr8_1:83850273-83850292 None:intergenic 20.0%
!! AAAACTATAAGTACTTAAAC+TGG - chr8_1:83850504-83850523 None:intergenic 20.0%
!! AGAATCTATAAAAGGAAAAA+GGG + chr8_1:83850527-83850546 Msa1220640:intron 20.0%
!! AAGTATATTATTAACTAAGG+GGG + chr8_1:83850757-83850776 Msa1220640:intron 20.0%
!!! TCACTCTTTTATATAGTATT+GGG - chr8_1:83850860-83850879 None:intergenic 20.0%
!!! TTCACTCTTTTATATAGTAT+TGG - chr8_1:83850861-83850880 None:intergenic 20.0%
!!! TTTTAGCGTATATATAAAAC+CGG + chr8_1:83851199-83851218 Msa1220640:intron 20.0%
!! TATCTTAACTTTATTCTTTC+TGG - chr8_1:83851525-83851544 None:intergenic 20.0%
!! AGAAAGAATAAAGTTAAGAT+AGG + chr8_1:83851524-83851543 Msa1220640:intron 20.0%
!! AGGAAAATTGTAAATAGATA+AGG + chr8_1:83851635-83851654 Msa1220640:intron 20.0%
!!! GAAAATACATTTTGTAATAG+AGG + chr8_1:83851657-83851676 Msa1220640:intron 20.0%
!!! TAAAATTAATTTTACCTGCA+AGG + chr8_1:83851946-83851965 Msa1220640:intron 20.0%
!! AAAAGAAATATTTCATTGTC+TGG - chr8_1:83852024-83852043 None:intergenic 20.0%
!!! TGAAATATTTCTTTTCATTG+AGG + chr8_1:83852029-83852048 Msa1220640:intron 20.0%
!!! TGTAATTTTATTCAGGAATT+GGG - chr8_1:83852177-83852196 None:intergenic 20.0%
!!! TTGTAATTTTATTCAGGAAT+TGG - chr8_1:83852178-83852197 None:intergenic 20.0%
!!! ACTGTTTTGTAATTTTATTC+AGG - chr8_1:83852184-83852203 None:intergenic 20.0%
!! AAAATTACAAAACAGTTAGA+TGG + chr8_1:83852188-83852207 Msa1220640:three_prime_UTR 20.0%
!!! TTTAACAGATTTGTTTTTAC+AGG + chr8_1:83852241-83852260 Msa1220640:three_prime_UTR 20.0%
!!! ATTAAGGTGTTTAATTATCT+CGG - chr8_1:83852304-83852323 None:intergenic 20.0%
!! ATTCAATTTCTTTATAAGAG+AGG - chr8_1:83852414-83852433 None:intergenic 20.0%
!!! TATTTTATTTACATATGGGT+GGG + chr8_1:83852489-83852508 Msa1220640:three_prime_UTR 20.0%
!! ATGTAATTCTTAAATGGTTA+TGG + chr8_1:83852550-83852569 Msa1220640:three_prime_UTR 20.0%
!! AAACAATTTCTAATCCTTTA+AGG - chr8_1:83852582-83852601 None:intergenic 20.0%
! CAAAAGATAATAGCCAAATT+TGG + chr8_1:83844537-83844556 Msa1220640:CDS 25.0%
!!! TGTGTTTTGTTTTTATGTGA+AGG + chr8_1:83844797-83844816 Msa1220640:CDS 25.0%
!!! TAGGGTTGATTCAATTTTTT+TGG + chr8_1:83844915-83844934 Msa1220640:intron 25.0%
!!! AGGGTTGATTCAATTTTTTT+GGG + chr8_1:83844916-83844935 Msa1220640:intron 25.0%
! CAACAATCTATAACTAACAA+AGG - chr8_1:83845056-83845075 None:intergenic 25.0%
! AGTTACATTCTACATTTGTT+TGG + chr8_1:83845092-83845111 Msa1220640:intron 25.0%
! TTTCAAAAGAAGTTAGTTGA+AGG + chr8_1:83845188-83845207 Msa1220640:CDS 25.0%
!!! CTATTTTTAGTGGGAAATTT+TGG + chr8_1:83845558-83845577 Msa1220640:intron 25.0%
! TAATAATCTGCAGAAATTGA+TGG + chr8_1:83845679-83845698 Msa1220640:three_prime_UTR 25.0%
! AATAATCTGCAGAAATTGAT+GGG + chr8_1:83845680-83845699 Msa1220640:three_prime_UTR 25.0%
! GCCAAAATTAAGATATTTCA+AGG + chr8_1:83845743-83845762 Msa1220640:three_prime_UTR 25.0%
!!! TTTGCAAGCATTGTTTTTAA+AGG + chr8_1:83845804-83845823 Msa1220640:intron 25.0%
!! TTTCTGCTATTTACTTCATT+TGG + chr8_1:83845940-83845959 Msa1220640:intron 25.0%
!!! TTTTTGTTTTAGTGTTGTGA+TGG + chr8_1:83846009-83846028 Msa1220640:intron 25.0%
!!! TTTTGTTTTAGTGTTGTGAT+GGG + chr8_1:83846010-83846029 Msa1220640:intron 25.0%
! AATAATGTGTACTTTGTCTT+GGG - chr8_1:83846692-83846711 None:intergenic 25.0%
! TAATAATGTGTACTTTGTCT+TGG - chr8_1:83846693-83846712 None:intergenic 25.0%
!!! AGTATATACTTCACTTTTTC+AGG + chr8_1:83846893-83846912 Msa1220640:intron 25.0%
!!! GTATATACTTCACTTTTTCA+GGG + chr8_1:83846894-83846913 Msa1220640:intron 25.0%
!!! TATATACTTCACTTTTTCAG+GGG + chr8_1:83846895-83846914 Msa1220640:intron 25.0%
!!! TTGATTCCATGTTTTGAATT+TGG + chr8_1:83847028-83847047 Msa1220640:intron 25.0%
! AAACAAAACTACATCTGAAA+AGG - chr8_1:83847138-83847157 None:intergenic 25.0%
!!! TCAAGATGTATTTTAGCATT+TGG + chr8_1:83847279-83847298 Msa1220640:three_prime_UTR 25.0%
! AAATAACTAATGCTAACAAC+AGG - chr8_1:83847588-83847607 None:intergenic 25.0%
! TCCAATATTAAGAAAAGAAG+GGG - chr8_1:83847611-83847630 None:intergenic 25.0%
! ATACACATTCACTTTAACAT+AGG + chr8_1:83847706-83847725 Msa1220640:intron 25.0%
!!! TAATTTTGACCGAAATGATT+TGG + chr8_1:83847838-83847857 Msa1220640:intron 25.0%
!! ATAGTAAAGATCAGTTTTTC+AGG - chr8_1:83847868-83847887 None:intergenic 25.0%
! GAATAAAGCTAGTTAGAAAA+AGG - chr8_1:83847940-83847959 None:intergenic 25.0%
! TAAATGAATTGAGTTCAACA+TGG + chr8_1:83847974-83847993 Msa1220640:intron 25.0%
! ATAAGATAGTACACAATTCT+TGG + chr8_1:83848085-83848104 Msa1220640:intron 25.0%
! ATTATTTGAATCATCCACTA+TGG + chr8_1:83848134-83848153 Msa1220640:intron 25.0%
!!! ATTGTATCTTTGTTGTTAGT+TGG + chr8_1:83848244-83848263 Msa1220640:intron 25.0%
! ATTAAACTCTTTCGAATCTA+TGG - chr8_1:83848276-83848295 None:intergenic 25.0%
! GAAATCACTTTACTGAATAT+AGG + chr8_1:83848370-83848389 Msa1220640:intron 25.0%
!!! GATGAAAAGGAGAATTTTTT+TGG - chr8_1:83848657-83848676 None:intergenic 25.0%
! AAAAACTGAATCAGATGAAA+AGG - chr8_1:83848670-83848689 None:intergenic 25.0%
!! TTGTTGTATGATTTTCTGTT+TGG + chr8_1:83848748-83848767 Msa1220640:intron 25.0%
!!! AGGACAAGAAATTTTTAGAA+GGG - chr8_1:83849135-83849154 None:intergenic 25.0%
!!! TTTTTCAGAAATTTTCAACC+CGG + chr8_1:83849590-83849609 Msa1220640:three_prime_UTR 25.0%
!! CAATATTCTAAAAAGCACAT+TGG + chr8_1:83849724-83849743 Msa1220640:intron 25.0%
!!! GGATCATATTTTGAGAAAAT+TGG + chr8_1:83849811-83849830 Msa1220640:three_prime_UTR 25.0%
!!! ATAGAACTTGGTTTGTAAAA+AGG + chr8_1:83849881-83849900 Msa1220640:three_prime_UTR 25.0%
! AAGGAAAAAAGAATAAATCG+GGG + chr8_1:83850135-83850154 Msa1220640:intron 25.0%
! TTCTAATCTCAAAATTGCTT+TGG + chr8_1:83850161-83850180 Msa1220640:intron 25.0%
!! TTACTCACCAAAATATCTTT+TGG + chr8_1:83850288-83850307 Msa1220640:intron 25.0%
!!! TTTTTTCCAGATATCCTTTT+AGG - chr8_1:83850391-83850410 None:intergenic 25.0%
! TGAATAATAATCCTGATACT+TGG - chr8_1:83850451-83850470 None:intergenic 25.0%
!! GTTTTCAGAGAATCTATAAA+AGG + chr8_1:83850519-83850538 Msa1220640:intron 25.0%
! GAGAATCTATAAAAGGAAAA+AGG + chr8_1:83850526-83850545 Msa1220640:intron 25.0%
! AGTATATTATTAACTAAGGG+GGG + chr8_1:83850758-83850777 Msa1220640:intron 25.0%
! AGGTATATTTAGTATCAATC+TGG + chr8_1:83850800-83850819 Msa1220640:intron 25.0%
! GGTATATTTAGTATCAATCT+GGG + chr8_1:83850801-83850820 Msa1220640:intron 25.0%
! TTTAGCGTATATATAAAACC+GGG + chr8_1:83851200-83851219 Msa1220640:intron 25.0%
! ATTGTAATCAGTTATGATCA+AGG - chr8_1:83851429-83851448 None:intergenic 25.0%
!!! ACTATAAAAACTTGGTTTTC+TGG + chr8_1:83852137-83852156 Msa1220640:intron 25.0%
!! GTAATTTTATTCAGGAATTG+GGG - chr8_1:83852176-83852195 None:intergenic 25.0%
!!! TTTTTACAGGTTATTTCATG+TGG + chr8_1:83852254-83852273 Msa1220640:three_prime_UTR 25.0%
! AAACACCTTAATCAACAAAA+AGG + chr8_1:83852312-83852331 Msa1220640:three_prime_UTR 25.0%
!!! GTATTTTATTTACATATGGG+TGG + chr8_1:83852488-83852507 Msa1220640:three_prime_UTR 25.0%
! ATTGTTTGTAAAGTTCTTAG+TGG + chr8_1:83852595-83852614 Msa1220640:three_prime_UTR 25.0%
TTACACAAAAAAAACCTCGT+CGG - chr8_1:83844666-83844685 None:intergenic 30.0%
!!! TTGTTTTTATGTGAAGGTAC+TGG + chr8_1:83844803-83844822 Msa1220640:CDS 30.0%
!!! GGGTTGATTCAATTTTTTTG+GGG + chr8_1:83844917-83844936 Msa1220640:intron 30.0%
TACATTCTACATTTGTTTGG+TGG + chr8_1:83845095-83845114 Msa1220640:intron 30.0%
!! TCTTTTGAAAAACATACAGC+AGG - chr8_1:83845178-83845197 None:intergenic 30.0%
GTCTTGCTAATCAAATGATT+TGG + chr8_1:83845421-83845440 Msa1220640:intron 30.0%
!! TGCTAATCAAATGATTTGGT+TGG + chr8_1:83845425-83845444 Msa1220640:intron 30.0%
TAACTCAAACACAAACATCA+AGG - chr8_1:83845510-83845529 None:intergenic 30.0%
TTTAAATGAGTACCTGTCAT+CGG - chr8_1:83845534-83845553 None:intergenic 30.0%
!! TTTTTAGTGGGAAATTTTGG+TGG + chr8_1:83845561-83845580 Msa1220640:intron 30.0%
AAAATTGAGTGTGAGTTGTT+TGG + chr8_1:83845647-83845666 Msa1220640:three_prime_UTR 30.0%
ATAATCTGCAGAAATTGATG+GGG + chr8_1:83845681-83845700 Msa1220640:three_prime_UTR 30.0%
GCAAATTGAAAAACAACATC+AGG - chr8_1:83845725-83845744 None:intergenic 30.0%
! TTTTGACATTAAGTGCAGTA+TGG + chr8_1:83845970-83845989 Msa1220640:intron 30.0%
TAATCAACACAACGAAAATG+AGG + chr8_1:83846104-83846123 Msa1220640:intron 30.0%
ATAATGTGTACTTTGTCTTG+GGG - chr8_1:83846691-83846710 None:intergenic 30.0%
TAATGAAGTGAATTGAACAC+AGG + chr8_1:83846721-83846740 Msa1220640:intron 30.0%
GAATCTTCTAATCTCATTGT+TGG + chr8_1:83846773-83846792 Msa1220640:three_prime_UTR 30.0%
TAGAGATTGCTTGTTCATAA+GGG - chr8_1:83846970-83846989 None:intergenic 30.0%
ATAGAGATTGCTTGTTCATA+AGG - chr8_1:83846971-83846990 None:intergenic 30.0%
AACAAGCAATCTCTATTACT+GGG + chr8_1:83846975-83846994 Msa1220640:three_prime_UTR 30.0%
CTTTGGATGTGAAAAATTGA+TGG + chr8_1:83847060-83847079 Msa1220640:intron 30.0%
GTGTAAATGCTGTCAAATAA+TGG - chr8_1:83847196-83847215 None:intergenic 30.0%
TTAACTTCTATTCAGAAGAG+AGG + chr8_1:83847231-83847250 Msa1220640:three_prime_UTR 30.0%
!!! GTATTTTAGCATTTGGTCAT+TGG + chr8_1:83847286-83847305 Msa1220640:three_prime_UTR 30.0%
! GGTTCTATGTTGATTACAAT+TGG + chr8_1:83847307-83847326 Msa1220640:three_prime_UTR 30.0%
! TCTATGTTGATTACAATTGG+TGG + chr8_1:83847310-83847329 Msa1220640:three_prime_UTR 30.0%
! TCCCCTTCTTTTCTTAATAT+TGG + chr8_1:83847607-83847626 Msa1220640:intron 30.0%
! ACATAGGAATTCCAGAATTT+TGG + chr8_1:83847722-83847741 Msa1220640:intron 30.0%
GTTAGAAAAAGGCAATAGTT+GGG - chr8_1:83847929-83847948 None:intergenic 30.0%
AGTTAGAAAAAGGCAATAGT+TGG - chr8_1:83847930-83847949 None:intergenic 30.0%
AAATCATTAGAGAAATGCCA+AGG - chr8_1:83848163-83848182 None:intergenic 30.0%
!! TCTTTGTTGTTAGTTGGATT+TGG + chr8_1:83848250-83848269 Msa1220640:intron 30.0%
!!! TCTCTCCCTCTATTTTTAAT+TGG + chr8_1:83848479-83848498 Msa1220640:intron 30.0%
!!! TGTACTGATTTTCTGATTGT+AGG + chr8_1:83848513-83848532 Msa1220640:intron 30.0%
! GTGAAATACAAGATGGATTT+GGG + chr8_1:83848966-83848985 Msa1220640:three_prime_UTR 30.0%
ATTCGATGCGTTTGAATAAT+TGG + chr8_1:83849022-83849041 Msa1220640:three_prime_UTR 30.0%
ATGCGTTTGAATAATTGGAT+TGG + chr8_1:83849027-83849046 Msa1220640:three_prime_UTR 30.0%
TGCGTTTGAATAATTGGATT+GGG + chr8_1:83849028-83849047 Msa1220640:three_prime_UTR 30.0%
!! AAAGCTCGCAAAAAGTATTA+CGG - chr8_1:83849054-83849073 None:intergenic 30.0%
!! GGACAAGAAATTTTTAGAAG+GGG - chr8_1:83849134-83849153 None:intergenic 30.0%
!! CAGGACAAGAAATTTTTAGA+AGG - chr8_1:83849136-83849155 None:intergenic 30.0%
TTTGTCTACTAAAACATTGC+AGG + chr8_1:83849783-83849802 Msa1220640:intron 30.0%
ACAAACAATTTGGTATGAAC+TGG + chr8_1:83849968-83849987 Msa1220640:three_prime_UTR 30.0%
GTATGAACTGGATTTATACA+AGG + chr8_1:83849980-83849999 Msa1220640:three_prime_UTR 30.0%
TTGACTTTATCTTAAGTGAC+TGG + chr8_1:83850031-83850050 Msa1220640:three_prime_UTR 30.0%
CAATTACAAAACAAAATGCC+AGG + chr8_1:83850079-83850098 Msa1220640:intron 30.0%
!! ATACCATATTTTTGTGATCC+TGG - chr8_1:83850100-83850119 None:intergenic 30.0%
AGGAAAAAAGAATAAATCGG+GGG + chr8_1:83850136-83850155 Msa1220640:intron 30.0%
! GGAATTTTGAGCAATTTCAT+CGG + chr8_1:83850326-83850345 Msa1220640:intron 30.0%
TAATCATAACCAATGTAGTC+AGG + chr8_1:83850591-83850610 Msa1220640:intron 30.0%
!! CTTTTATATAGTATTGGGCT+AGG - chr8_1:83850855-83850874 None:intergenic 30.0%
GAGAAAAGAGAGAATAACTA+GGG - chr8_1:83850893-83850912 None:intergenic 30.0%
AAAATGGTTAGAGAAGAAGA+AGG - chr8_1:83850959-83850978 None:intergenic 30.0%
! TCTGTTTTCATTTTCTCTCA+TGG - chr8_1:83851068-83851087 None:intergenic 30.0%
AGAAAATGAAAACAGAGCAT+GGG + chr8_1:83851072-83851091 Msa1220640:intron 30.0%
ATCGGAGAATGAAAAATTTC+TGG + chr8_1:83851175-83851194 Msa1220640:intron 30.0%
TCGGAGAATGAAAAATTTCT+GGG + chr8_1:83851176-83851195 Msa1220640:intron 30.0%
ACTGATTACAATGAATCTGA+TGG + chr8_1:83851437-83851456 Msa1220640:intron 30.0%
ATTGGCAAGGTTAAAAGTTA+GGG - chr8_1:83851812-83851831 None:intergenic 30.0%
AATTGGCAAGGTTAAAAGTT+AGG - chr8_1:83851813-83851832 None:intergenic 30.0%
! GTTTTTATAGTCGAGAGAAA+TGG - chr8_1:83852128-83852147 None:intergenic 30.0%
TTCTCTCGACTATAAAAACT+TGG + chr8_1:83852129-83852148 Msa1220640:intron 30.0%
ACCTTAATCAACAAAAAGGT+GGG + chr8_1:83852316-83852335 Msa1220640:three_prime_UTR 30.0%
! TTATAAGAGAGGTATGACAT+CGG - chr8_1:83852403-83852422 None:intergenic 30.0%
GGTTATGGTATTTACCTTAA+AGG + chr8_1:83852565-83852584 Msa1220640:three_prime_UTR 30.0%
TTGAAATAATAAGACCTCTC+AGG - chr8_1:83852654-83852673 None:intergenic 30.0%
AAAACACAAGATTGGGATGT+AGG - chr8_1:83844785-83844804 None:intergenic 35.0%
TTCTGACTCTTCAAGTAGTT+TGG + chr8_1:83844876-83844895 Msa1220640:intron 35.0%
AAAATTGAATCAACCCTAGC+AGG - chr8_1:83844913-83844932 None:intergenic 35.0%
TGCTTGATCAGAAAACAGTT+GGG - chr8_1:83844988-83845007 None:intergenic 35.0%
TTGCTTGATCAGAAAACAGT+TGG - chr8_1:83844989-83845008 None:intergenic 35.0%
TCAAGCAAACTCAATTGAGA+TGG + chr8_1:83845001-83845020 Msa1220640:CDS 35.0%
GATGGTTCTTATAGATGATG+AGG + chr8_1:83845019-83845038 Msa1220640:CDS 35.0%
! CTACATTTGTTTGGTGGAAA+TGG + chr8_1:83845101-83845120 Msa1220640:intron 35.0%
AAAGAAGTTAGTTGAAGGAG+AGG + chr8_1:83845193-83845212 Msa1220640:exon 35.0%
TATATGGATGGAGCATAGTA+CGG - chr8_1:83845252-83845271 None:intergenic 35.0%
! ATCTGGAAAATCGGCTTATA+TGG - chr8_1:83845268-83845287 None:intergenic 35.0%
! TTGGTCTTCATCTGGAAAAT+CGG - chr8_1:83845277-83845296 None:intergenic 35.0%
ATCTTCATTACTATGCACCT+TGG - chr8_1:83845296-83845315 None:intergenic 35.0%
ATGAAGATTGATGTAGCTTC+TGG + chr8_1:83845308-83845327 Msa1220640:three_prime_UTR 35.0%
GCTGATTACGACTATTTAGT+TGG + chr8_1:83845338-83845357 Msa1220640:three_prime_UTR 35.0%
!! ATGATTTGGTTGGATGTCAT+TGG + chr8_1:83845435-83845454 Msa1220640:intron 35.0%
! ATTTCTGCTGAGAGTATATC+AGG + chr8_1:83845471-83845490 Msa1220640:intron 35.0%
! TTTCTGCTGAGAGTATATCA+GGG + chr8_1:83845472-83845491 Msa1220640:intron 35.0%
! ATTTGTTAATCCTCCCATTG+AGG + chr8_1:83845889-83845908 Msa1220640:intron 35.0%
ATGCTGTGAAGTTTAGAGAT+GGG + chr8_1:83845912-83845931 Msa1220640:intron 35.0%
!! ATAACAAACGGGCTCAATTT+TGG - chr8_1:83846210-83846229 None:intergenic 35.0%
ATTTCACAAAGAGCAATGAG+TGG + chr8_1:83846801-83846820 Msa1220640:three_prime_UTR 35.0%
GAACAAGCAATCTCTATTAC+TGG + chr8_1:83846974-83846993 Msa1220640:three_prime_UTR 35.0%
CCATCTCCAAATTCAAAACA+TGG - chr8_1:83847037-83847056 None:intergenic 35.0%
!! CCATGTTTTGAATTTGGAGA+TGG + chr8_1:83847034-83847053 Msa1220640:intron 35.0%
GAATTTGGAGATGGTAACTT+TGG + chr8_1:83847043-83847062 Msa1220640:intron 35.0%
! GATTACAATTGGTGGACATA+TGG + chr8_1:83847318-83847337 Msa1220640:three_prime_UTR 35.0%
! CAACGATAGTCTGCATATTT+TGG + chr8_1:83847547-83847566 Msa1220640:intron 35.0%
!! AATTTTGGCCTGATACAGAT+TGG + chr8_1:83847737-83847756 Msa1220640:intron 35.0%
AGACAAATCCAATCTGTATC+AGG - chr8_1:83847748-83847767 None:intergenic 35.0%
ATACAGATTGGATTTGTCTC+AGG + chr8_1:83847749-83847768 Msa1220640:intron 35.0%
GTAGTCACCTAAATCATAGA+TGG + chr8_1:83847815-83847834 Msa1220640:intron 35.0%
CTGTTTGGAAGATTCTTTGT+AGG + chr8_1:83848763-83848782 Msa1220640:intron 35.0%
TGTAGGATTGTGATAGATGT+TGG + chr8_1:83848859-83848878 Msa1220640:three_prime_UTR 35.0%
TTGATCTTGAGGACAAAATC+CGG - chr8_1:83848886-83848905 None:intergenic 35.0%
TGTCTCAAATGTTGATCTTG+AGG - chr8_1:83848897-83848916 None:intergenic 35.0%
AGGAAACGTGAAATACAAGA+TGG + chr8_1:83848959-83848978 Msa1220640:three_prime_UTR 35.0%
! CGTGAAATACAAGATGGATT+TGG + chr8_1:83848965-83848984 Msa1220640:three_prime_UTR 35.0%
! AAATACAAGATGGATTTGGG+AGG + chr8_1:83848969-83848988 Msa1220640:three_prime_UTR 35.0%
AGCATATGAACTCGATTTAC+CGG - chr8_1:83848998-83849017 None:intergenic 35.0%
!! GAAATTTTTAGAAGGGGACT+GGG - chr8_1:83849128-83849147 None:intergenic 35.0%
!! AGAAATTTTTAGAAGGGGAC+TGG - chr8_1:83849129-83849148 None:intergenic 35.0%
TGATCCAGTAACATAAGAAG+TGG + chr8_1:83849272-83849291 Msa1220640:intron 35.0%
GATCCAGTAACATAAGAAGT+GGG + chr8_1:83849273-83849292 Msa1220640:intron 35.0%
TAACATAAGAAGTGGGAGAT+GGG + chr8_1:83849280-83849299 Msa1220640:intron 35.0%
ACCATAATCAAGCAAGTGAA+AGG + chr8_1:83849357-83849376 Msa1220640:three_prime_UTR 35.0%
TCCTTTCACTTGCTTGATTA+TGG - chr8_1:83849361-83849380 None:intergenic 35.0%
CGTACCAACCTAAAATTGAT+GGG - chr8_1:83849455-83849474 None:intergenic 35.0%
TCGTACCAACCTAAAATTGA+TGG - chr8_1:83849456-83849475 None:intergenic 35.0%
TTTATACCCTTCAGAAGCAA+GGG - chr8_1:83849502-83849521 None:intergenic 35.0%
! TTTTATACCCTTCAGAAGCA+AGG - chr8_1:83849503-83849522 None:intergenic 35.0%
GGTATAAAAGTTCGCTAAAG+AGG + chr8_1:83849514-83849533 Msa1220640:three_prime_UTR 35.0%
GGAATCCAACCTAATTAAGA+AGG + chr8_1:83849558-83849577 Msa1220640:three_prime_UTR 35.0%
ATCCAACCTAATTAAGAAGG+TGG + chr8_1:83849561-83849580 Msa1220640:three_prime_UTR 35.0%
TGAAGGATTTCGTGATAGTT+TGG + chr8_1:83849629-83849648 Msa1220640:three_prime_UTR 35.0%
TACTAAAACATTGCAGGTTG+TGG + chr8_1:83849789-83849808 Msa1220640:intron 35.0%
ACTAAAACATTGCAGGTTGT+GGG + chr8_1:83849790-83849809 Msa1220640:intron 35.0%
TGAGTAGACAACAAAAGATG+TGG - chr8_1:83849839-83849858 None:intergenic 35.0%
CTGATGCACATAATAGAACT+TGG + chr8_1:83849869-83849888 Msa1220640:three_prime_UTR 35.0%
AGTGACTGGCATAATTTCTT+TGG + chr8_1:83850045-83850064 Msa1220640:three_prime_UTR 35.0%
ATGCCAGGATCACAAAAATA+TGG + chr8_1:83850094-83850113 Msa1220640:intron 35.0%
TGAGCAGATTAAACTCAACA+GGG - chr8_1:83850221-83850240 None:intergenic 35.0%
ATGAGCAGATTAAACTCAAC+AGG - chr8_1:83850222-83850241 None:intergenic 35.0%
! CTCACCAAAATATCTTTTGG+CGG + chr8_1:83850291-83850310 Msa1220640:intron 35.0%
! TGTACCGCCAAAAGATATTT+TGG - chr8_1:83850298-83850317 None:intergenic 35.0%
! TTTCCAGATATCCTTTTAGG+AGG - chr8_1:83850388-83850407 None:intergenic 35.0%
ATGTGTATTCACCAAGTATC+AGG + chr8_1:83850437-83850456 Msa1220640:intron 35.0%
CTTAAACTGGTTGTGATGTT+TGG - chr8_1:83850491-83850510 None:intergenic 35.0%
AAAAGGGAACAATAATGCAG+AGG + chr8_1:83850543-83850562 Msa1220640:intron 35.0%
! TTACAATTTTGCCCTCAAGT+GGG - chr8_1:83850691-83850710 None:intergenic 35.0%
GGAGAAAAGAGAGAATAACT+AGG - chr8_1:83850894-83850913 None:intergenic 35.0%
GACAGATGATGAAGAGAAAA+TGG - chr8_1:83850975-83850994 None:intergenic 35.0%
! CATTTTCTCTCATGGAATCA+TGG - chr8_1:83851060-83851079 None:intergenic 35.0%
GAGAAAATGAAAACAGAGCA+TGG + chr8_1:83851071-83851090 Msa1220640:intron 35.0%
GGTTTGAGTGAGAAAGAAAT+CGG + chr8_1:83851157-83851176 Msa1220640:intron 35.0%
! ACGTAAGTTTAAAACGTGCT+GGG - chr8_1:83851277-83851296 None:intergenic 35.0%
! AACGTAAGTTTAAAACGTGC+TGG - chr8_1:83851278-83851297 None:intergenic 35.0%
TAAACTTACGTTCCTGTATC+AGG + chr8_1:83851286-83851305 Msa1220640:intron 35.0%
!!! TTTTTTGCATCTTCACAGTC+AGG - chr8_1:83851320-83851339 None:intergenic 35.0%
! ATCTGATGGATATATAGCGA+AGG + chr8_1:83851451-83851470 Msa1220640:intron 35.0%
AGTACGTAGTCTCACTAAAA+TGG + chr8_1:83851499-83851518 Msa1220640:intron 35.0%
GAGGCAAAAACAAAAGGTTT+GGG - chr8_1:83851583-83851602 None:intergenic 35.0%
AGAGGCAAAAACAAAAGGTT+TGG - chr8_1:83851584-83851603 None:intergenic 35.0%
AACGAAGAGGCAAAAACAAA+AGG - chr8_1:83851589-83851608 None:intergenic 35.0%
! GAGATCATTCTTTTCACCAA+CGG + chr8_1:83851759-83851778 Msa1220640:intron 35.0%
GGAAATTAGACTGTCTTCAA+TGG - chr8_1:83851788-83851807 None:intergenic 35.0%
GATTGAAGAGCTCATAGAAT+TGG - chr8_1:83851830-83851849 None:intergenic 35.0%
! TAACACTGAATTTTCCTTGC+AGG - chr8_1:83851963-83851982 None:intergenic 35.0%
GTTAAAGAACTTGTCATCAC+TGG + chr8_1:83851985-83852004 Msa1220640:intron 35.0%
CACCTTAATCAACAAAAAGG+TGG + chr8_1:83852315-83852334 Msa1220640:three_prime_UTR 35.0%
! GGAGCATTTATTCTGTTAAG+TGG - chr8_1:83852357-83852376 None:intergenic 35.0%
TTTACATATGGGTGGGTATA+TGG + chr8_1:83852496-83852515 Msa1220640:three_prime_UTR 35.0%
! TATGGTGGAATAAGACAATG+TGG - chr8_1:83852631-83852650 None:intergenic 35.0%
ATAATAAGACCTCTCAGGTA+TGG - chr8_1:83852649-83852668 None:intergenic 35.0%
CAGGAAAGTTTGGCCAAATT+TGG - chr8_1:83844553-83844572 None:intergenic 40.0%
! TTCCTGTACATCTCCGTTTT+TGG + chr8_1:83844567-83844586 Msa1220640:CDS 40.0%
!!! TGTACATCTCCGTTTTTGGT+GGG + chr8_1:83844571-83844590 Msa1220640:CDS 40.0%
AAAGCCAAACCCACCAAAAA+CGG - chr8_1:83844583-83844602 None:intergenic 40.0%
ATCTGTTGTGCTCTTCATGT+GGG + chr8_1:83844611-83844630 Msa1220640:CDS 40.0%
GCTTTATCTGTGTCAAAGAC+TGG + chr8_1:83844702-83844721 Msa1220640:CDS 40.0%
CTACTTGAAGAGTCAGAAGA+GGG - chr8_1:83844874-83844893 None:intergenic 40.0%
ACTACTTGAAGAGTCAGAAG+AGG - chr8_1:83844875-83844894 None:intergenic 40.0%
GAATACATGTTTCTCCCTTC+AGG + chr8_1:83844943-83844962 Msa1220640:intron 40.0%
TACCTACAACAGCGGAAAAT+GGG - chr8_1:83845128-83845147 None:intergenic 40.0%
! GGAAAATCGGCTTATATGGA+TGG - chr8_1:83845264-83845283 None:intergenic 40.0%
! GATTTTCCAGATGAAGACCA+AGG + chr8_1:83845276-83845295 Msa1220640:three_prime_UTR 40.0%
TATACTCTCAGCAGAAATCC+CGG - chr8_1:83845469-83845488 None:intergenic 40.0%
AGAGTATATCAGGGATGGAA+AGG + chr8_1:83845481-83845500 Msa1220640:intron 40.0%
! TGTTTGAGTTAACCGATGAC+AGG + chr8_1:83845519-83845538 Msa1220640:three_prime_UTR 40.0%
!! TCCTGTTTGTTTGGTGTAGT+GGG + chr8_1:83845624-83845643 Msa1220640:intron 40.0%
TGTTGTCTTCAAATCGCGTA+AGG + chr8_1:83845768-83845787 Msa1220640:three_prime_UTR 40.0%
AACTTCACAGCATCCTCAAT+GGG - chr8_1:83845905-83845924 None:intergenic 40.0%
AAACTTCACAGCATCCTCAA+TGG - chr8_1:83845906-83845925 None:intergenic 40.0%
GATGCTGTGAAGTTTAGAGA+TGG + chr8_1:83845911-83845930 Msa1220640:intron 40.0%
!!! GTTTTAGTGTTGTGATGGGT+TGG + chr8_1:83846014-83846033 Msa1220640:intron 40.0%
GGGGTTCCAAAACAGATTAT+GGG - chr8_1:83846672-83846691 None:intergenic 40.0%
TGGGGTTCCAAAACAGATTA+TGG - chr8_1:83846673-83846692 None:intergenic 40.0%
TGAAAACGTTTACGTCGCAT+TGG + chr8_1:83846932-83846951 Msa1220640:three_prime_UTR 40.0%
CAATGGCAGCATTTCATGAA+GGG - chr8_1:83847353-83847372 None:intergenic 40.0%
CCAACATGATCAAAAGCCAA+TGG - chr8_1:83847370-83847389 None:intergenic 40.0%
!!! CCATTGGCTTTTGATCATGT+TGG + chr8_1:83847367-83847386 Msa1220640:three_prime_UTR 40.0%
AAGATGCAAGTAGCAACGAT+AGG - chr8_1:83847511-83847530 None:intergenic 40.0%
TCTGTATCAGGCCAAAATTC+TGG - chr8_1:83847736-83847755 None:intergenic 40.0%
TCAGGCACACCAAATCATTT+CGG - chr8_1:83847850-83847869 None:intergenic 40.0%
ATCATCCACTATGGATTCCT+TGG + chr8_1:83848143-83848162 Msa1220640:intron 40.0%
AAATGCCAAGGAATCCATAG+TGG - chr8_1:83848151-83848170 None:intergenic 40.0%
TGATCTTGAGGACAAAATCC+GGG - chr8_1:83848885-83848904 None:intergenic 40.0%
GCAAATAGGGTTGAAGTTTC+AGG + chr8_1:83849098-83849117 Msa1220640:three_prime_UTR 40.0%
GCAAGCAAATTCAAAGAGAC+AGG - chr8_1:83849155-83849174 None:intergenic 40.0%
! ATTTGCTTGCTGAACCATTC+TGG + chr8_1:83849165-83849184 Msa1220640:intron 40.0%
! TTTGCTTGCTGAACCATTCT+GGG + chr8_1:83849166-83849185 Msa1220640:intron 40.0%
TCTCCCACTTCTTATGTTAC+TGG - chr8_1:83849279-83849298 None:intergenic 40.0%
GTAACATAAGAAGTGGGAGA+TGG + chr8_1:83849279-83849298 Msa1220640:intron 40.0%
AACATAAGAAGTGGGAGATG+GGG + chr8_1:83849281-83849300 Msa1220640:intron 40.0%
ACTGCATTTGAAGACCTGTA+TGG - chr8_1:83849315-83849334 None:intergenic 40.0%
TGTCACTGACAAAACATTGC+AGG + chr8_1:83849402-83849421 Msa1220640:three_prime_UTR 40.0%
! TGAGTCTGCCCATCAATTTT+AGG + chr8_1:83849444-83849463 Msa1220640:intron 40.0%
!! TCTGCCCATCAATTTTAGGT+TGG + chr8_1:83849448-83849467 Msa1220640:intron 40.0%
TTCTATTCCCTTGCTTCTGA+AGG + chr8_1:83849492-83849511 Msa1220640:intron 40.0%
TCTATTCCCTTGCTTCTGAA+GGG + chr8_1:83849493-83849512 Msa1220640:intron 40.0%
AGCCACCTTCTTAATTAGGT+TGG - chr8_1:83849566-83849585 None:intergenic 40.0%
ATGGAGCCACCTTCTTAATT+AGG - chr8_1:83849570-83849589 None:intergenic 40.0%
TTTCGTGATAGTTTGGAGAG+AGG + chr8_1:83849636-83849655 Msa1220640:three_prime_UTR 40.0%
TTCGTGATAGTTTGGAGAGA+GGG + chr8_1:83849637-83849656 Msa1220640:three_prime_UTR 40.0%
GAGCAGATTAAACTCAACAG+GGG - chr8_1:83850220-83850239 None:intergenic 40.0%
GGCAAATGCAACGTGTAATT+TGG - chr8_1:83850367-83850386 None:intergenic 40.0%
TTGCCTCCTAAAAGGATATC+TGG + chr8_1:83850382-83850401 Msa1220640:intron 40.0%
TAAGATCGAGGAACGTAACA+CGG + chr8_1:83850655-83850674 Msa1220640:intron 40.0%
! GTTACAATTTTGCCCTCAAG+TGG - chr8_1:83850692-83850711 None:intergenic 40.0%
TGAAGAGAGGTAGATCTAGA+TGG - chr8_1:83850934-83850953 None:intergenic 40.0%
GAAGAAGAAGGATTGAAGAG+AGG - chr8_1:83850947-83850966 None:intergenic 40.0%
CTTCGAAGAAGAGAATGAGA+AGG - chr8_1:83851027-83851046 None:intergenic 40.0%
GTCGGGTCAAAATTATAACC+CGG - chr8_1:83851221-83851240 None:intergenic 40.0%
!! GTTATAATTTTGACCCGACC+CGG + chr8_1:83851222-83851241 Msa1220640:intron 40.0%
AAGATGCAAAAAACGAACCC+AGG + chr8_1:83851327-83851346 Msa1220640:intron 40.0%
CAGTTATGATCAAGGTAGAC+AGG - chr8_1:83851421-83851440 None:intergenic 40.0%
GTAATGCTTCGACACAAGAT+TGG - chr8_1:83851556-83851575 None:intergenic 40.0%
TAGCTGCAACAGAGTAGATA+AGG + chr8_1:83851615-83851634 Msa1220640:intron 40.0%
AAGAGCTCATAGAATTGGCA+AGG - chr8_1:83851825-83851844 None:intergenic 40.0%
TCTTGTGTAGATAGAAGAGC+CGG - chr8_1:83851881-83851900 None:intergenic 40.0%
TTTCATTGAGGCAGTGTATG+TGG + chr8_1:83852041-83852060 Msa1220640:intron 40.0%
TTCATTGAGGCAGTGTATGT+GGG + chr8_1:83852042-83852061 Msa1220640:intron 40.0%
CTTGTTAGGTGAATTCCACA+CGG + chr8_1:83852083-83852102 Msa1220640:intron 40.0%
!! GCCCACCTTTTTGTTGATTA+AGG - chr8_1:83852320-83852339 None:intergenic 40.0%
CGGAGATGTACAGGAAAGTT+TGG - chr8_1:83844563-83844582 None:intergenic 45.0%
CACCAAAAACGGAGATGTAC+AGG - chr8_1:83844572-83844591 None:intergenic 45.0%
!! CTGTACATCTCCGTTTTTGG+TGG + chr8_1:83844570-83844589 Msa1220640:CDS 45.0%
!!! ATCTCCGTTTTTGGTGGGTT+TGG + chr8_1:83844576-83844595 Msa1220640:CDS 45.0%
GATCTGTTGTGCTCTTCATG+TGG + chr8_1:83844610-83844629 Msa1220640:CDS 45.0%
TTGTGCTCTTCATGTGGGAT+TGG + chr8_1:83844616-83844635 Msa1220640:CDS 45.0%
TGTGCTCTTCATGTGGGATT+GGG + chr8_1:83844617-83844636 Msa1220640:CDS 45.0%
CAAAAAAAACCTCGTCGGTG+CGG - chr8_1:83844661-83844680 None:intergenic 45.0%
ATCGGTACTTTCTGTGCCTT+TGG + chr8_1:83844749-83844768 Msa1220640:CDS 45.0%
TGTAGGAAGATCTCCTCCAA+AGG - chr8_1:83844768-83844787 None:intergenic 45.0%
GTACCTACAACAGCGGAAAA+TGG - chr8_1:83845129-83845148 None:intergenic 45.0%
GATCTTGGTACCTACAACAG+CGG - chr8_1:83845136-83845155 None:intergenic 45.0%
TTCTGTTGTGGCATGGATCT+TGG - chr8_1:83845151-83845170 None:intergenic 45.0%
! AGGTGTTTTCTGTTGTGGCA+TGG - chr8_1:83845158-83845177 None:intergenic 45.0%
! ACAGCAGGTGTTTTCTGTTG+TGG - chr8_1:83845163-83845182 None:intergenic 45.0%
GGTCTACAAGATGAAGACCA+AGG + chr8_1:83845214-83845233 Msa1220640:three_prime_UTR 45.0%
! TATGCACCTTGGTCTTCATC+TGG - chr8_1:83845285-83845304 None:intergenic 45.0%
!! GATGTCATTGGCTTGATGAC+CGG + chr8_1:83845447-83845466 Msa1220640:intron 45.0%
!! ATGTCATTGGCTTGATGACC+GGG + chr8_1:83845448-83845467 Msa1220640:intron 45.0%
! TGCTGAGAGTATATCAGGGA+TGG + chr8_1:83845476-83845495 Msa1220640:intron 45.0%
GTTGACGTGTCCTGTTTGTT+TGG + chr8_1:83845615-83845634 Msa1220640:intron 45.0%
!! GTCCTGTTTGTTTGGTGTAG+TGG + chr8_1:83845623-83845642 Msa1220640:intron 45.0%
TCCCACTACACCAAACAAAC+AGG - chr8_1:83845628-83845647 None:intergenic 45.0%
TTGATGGGGAAGTCTACTGA+TGG + chr8_1:83845695-83845714 Msa1220640:three_prime_UTR 45.0%
! AACGGGCCCATAATCTGTTT+TGG + chr8_1:83846663-83846682 Msa1220640:intron 45.0%
ACAAAGAGCAATGAGTGGAC+AGG + chr8_1:83846806-83846825 Msa1220640:three_prime_UTR 45.0%
TCAGAAGAGAGGTCATGCAA+TGG + chr8_1:83847242-83847261 Msa1220640:three_prime_UTR 45.0%
CCAATGGCAGCATTTCATGA+AGG - chr8_1:83847354-83847373 None:intergenic 45.0%
CCTTCATGAAATGCTGCCAT+TGG + chr8_1:83847351-83847370 Msa1220640:three_prime_UTR 45.0%
GATTGGATTTGTCTCAGGTG+TGG + chr8_1:83847754-83847773 Msa1220640:intron 45.0%
GATTGTGATAGATGTTGGCC+CGG + chr8_1:83848864-83848883 Msa1220640:three_prime_UTR 45.0%
GACAGAACGCGTTGAATATC+TGG + chr8_1:83848913-83848932 Msa1220640:three_prime_UTR 45.0%
! AATATCTGGTCTTCCCAAGC+AGG + chr8_1:83848927-83848946 Msa1220640:three_prime_UTR 45.0%
! TTTGCGAGCTTTTGCGATGA+TGG + chr8_1:83849062-83849081 Msa1220640:three_prime_UTR 45.0%
TGGACGGGTACTTGCAAATA+GGG + chr8_1:83849085-83849104 Msa1220640:three_prime_UTR 45.0%
GTGATTTAACAGCCGAAGTG+CGG + chr8_1:83849207-83849226 Msa1220640:intron 45.0%
ACATAAGAAGTGGGAGATGG+GGG + chr8_1:83849282-83849301 Msa1220640:intron 45.0%
TCCAGCAATGCTTCTGTCTT+GGG + chr8_1:83849537-83849556 Msa1220640:three_prime_UTR 45.0%
TCACAGCACGTCTCAAATTC+CGG - chr8_1:83849612-83849631 None:intergenic 45.0%
! GAATTTGAGACGTGCTGTGA+AGG + chr8_1:83849612-83849631 Msa1220640:three_prime_UTR 45.0%
TCGTGATAGTTTGGAGAGAG+GGG + chr8_1:83849638-83849657 Msa1220640:three_prime_UTR 45.0%
CAAAATTGCATACCCAGCAC+AGG - chr8_1:83849681-83849700 None:intergenic 45.0%
! CTGTGCTGGGTATGCAATTT+TGG + chr8_1:83849679-83849698 Msa1220640:intron 45.0%
! TTTTGGCGGTACACAGATAC+TGG + chr8_1:83850305-83850324 Msa1220640:intron 45.0%
CGTTGCATTTGCCTCCTAAA+AGG + chr8_1:83850374-83850393 Msa1220640:intron 45.0%
GAACTCGTTCCTGACTACAT+TGG - chr8_1:83850603-83850622 None:intergenic 45.0%
AACGAGTTCCTACGTAGGAT+CGG + chr8_1:83850614-83850633 Msa1220640:intron 45.0%
GTTCGTAAGAACCCACTTGA+GGG + chr8_1:83850677-83850696 Msa1220640:intron 45.0%
TAGATCTAGATGGTAGCAGG+CGG - chr8_1:83850924-83850943 None:intergenic 45.0%
AGGTAGATCTAGATGGTAGC+AGG - chr8_1:83850927-83850946 None:intergenic 45.0%
AATTCGCCGGAAAAGAGAAC+TGG + chr8_1:83851117-83851136 Msa1220640:intron 45.0%
TCAAACCCTAAACGCGAAAG+GGG - chr8_1:83851144-83851163 None:intergenic 45.0%
CTCAAACCCTAAACGCGAAA+GGG - chr8_1:83851145-83851164 None:intergenic 45.0%
ACTCAAACCCTAAACGCGAA+AGG - chr8_1:83851146-83851165 None:intergenic 45.0%
! TGATTTGGGCTTAACGAACC+GGG - chr8_1:83851243-83851262 None:intergenic 45.0%
! GTGATTTGGGCTTAACGAAC+CGG - chr8_1:83851244-83851263 None:intergenic 45.0%
GGGCTTGGCTTAAGTGATTT+GGG - chr8_1:83851257-83851276 None:intergenic 45.0%
TGGGCTTGGCTTAAGTGATT+TGG - chr8_1:83851258-83851277 None:intergenic 45.0%
! AGTTTAAAACGTGCTGGGCT+TGG - chr8_1:83851272-83851291 None:intergenic 45.0%
! AACGAGGCACGTTTTTGTGT+GGG + chr8_1:83851354-83851373 Msa1220640:intron 45.0%
!! TTTTTGTGTGGGAAGCACGT+AGG + chr8_1:83851365-83851384 Msa1220640:intron 45.0%
AGCGAAGGAAAGTTCAGTAG+TGG + chr8_1:83851466-83851485 Msa1220640:intron 45.0%
!! AGGAAAGTTCAGTAGTGGAC+AGG + chr8_1:83851471-83851490 Msa1220640:intron 45.0%
CTGTCTTCAATGGAATCCGT+TGG - chr8_1:83851778-83851797 None:intergenic 45.0%
GGCAAGGTTAAAAGTTAGGG+AGG - chr8_1:83851809-83851828 None:intergenic 45.0%
TTCCCATATGTTACCAGCTC+CGG + chr8_1:83851859-83851878 Msa1220640:intron 45.0%
! TGTGGGCTATCTTATCCACA+CGG + chr8_1:83852059-83852078 Msa1220640:intron 45.0%
TTAGGTGAATTCCACACGGT+AGG + chr8_1:83852087-83852106 Msa1220640:intron 45.0%
TATCTCAAGAACCTACCGTG+TGG - chr8_1:83852101-83852120 None:intergenic 45.0%
TACACTCCAGCATTCAGTCA+GGG + chr8_1:83852446-83852465 Msa1220640:three_prime_UTR 45.0%
CTTATTCCACCATACCTGAG+AGG + chr8_1:83852637-83852656 Msa1220640:three_prime_UTR 45.0%
ATAAGACCTCTCAGGTATGG+TGG - chr8_1:83852646-83852665 None:intergenic 45.0%
!!! TTTTTTAATGTATAATTATT+TGG + chr8_1:83845399-83845418 Msa1220640:intron 5.0%
!!! TTTTTATTTTATGAATTTTA+AGG + chr8_1:83846867-83846886 Msa1220640:intron 5.0%
!! TATAAAACAATATATAAATT+AGG - chr8_1:83847689-83847708 None:intergenic 5.0%
!! AATATATATATATTACTATT+CGG + chr8_1:83850413-83850432 Msa1220640:intron 5.0%
GGTACTTTCTGTGCCTTTGG+AGG + chr8_1:83844752-83844771 Msa1220640:CDS 50.0%
!! GTACTGGCTGTGTTTGTGTC+AGG + chr8_1:83844819-83844838 Msa1220640:CDS 50.0%
TCAACCCTAGCAGGAACACT+CGG - chr8_1:83844904-83844923 None:intergenic 50.0%
! GTTTCTCCCTTCAGGTTCTC+AGG + chr8_1:83844951-83844970 Msa1220640:intron 50.0%
CCAAAGCCTGAGAACCTGAA+GGG - chr8_1:83844960-83844979 None:intergenic 50.0%
! CCTTCAGGTTCTCAGGCTTT+GGG + chr8_1:83844958-83844977 Msa1220640:intron 50.0%
! GACCCATTTTCCGCTGTTGT+AGG + chr8_1:83845123-83845142 Msa1220640:intron 50.0%
CAAGATGAAGACCAAGGTGC+TGG + chr8_1:83845220-83845239 Msa1220640:three_prime_UTR 50.0%
TTCACAGCATCCTCAATGGG+AGG - chr8_1:83845902-83845921 None:intergenic 50.0%
CTGCTGCTCTTGCAGATTCT+AGG + chr8_1:83846747-83846766 Msa1220640:three_prime_UTR 50.0%
TGCTCTTGCAGATTCTAGGC+TGG + chr8_1:83846751-83846770 Msa1220640:three_prime_UTR 50.0%
CGTTTACGTCGCATTGGAAG+TGG + chr8_1:83846938-83846957 Msa1220640:three_prime_UTR 50.0%
GGTCTTCCCAAGCAGGATTT+CGG + chr8_1:83848934-83848953 Msa1220640:three_prime_UTR 50.0%
TCCTTGCCGAAATCCTGCTT+GGG - chr8_1:83848943-83848962 None:intergenic 50.0%
TTCCTTGCCGAAATCCTGCT+TGG - chr8_1:83848944-83848963 None:intergenic 50.0%
!!! GCTTTTGCGATGATGGTGGA+CGG + chr8_1:83849069-83849088 Msa1220640:three_prime_UTR 50.0%
!!! CTTTTGCGATGATGGTGGAC+GGG + chr8_1:83849070-83849089 Msa1220640:three_prime_UTR 50.0%
GTGGACGGGTACTTGCAAAT+AGG + chr8_1:83849084-83849103 Msa1220640:three_prime_UTR 50.0%
ATCACAGTCTCGAACGAGCA+TGG - chr8_1:83849192-83849211 None:intergenic 50.0%
!! CTAAACGAAGCACCGCACTT+CGG - chr8_1:83849222-83849241 None:intergenic 50.0%
ATGCAGTGCAGAGTGATACG+AGG + chr8_1:83849328-83849347 Msa1220640:three_prime_UTR 50.0%
! AGGAAGCATGTCCACTGTTG+TGG + chr8_1:83849377-83849396 Msa1220640:three_prime_UTR 50.0%
! GGAAGCATGTCCACTGTTGT+GGG + chr8_1:83849378-83849397 Msa1220640:three_prime_UTR 50.0%
TCAGTGACAACCCACAACAG+TGG - chr8_1:83849391-83849410 None:intergenic 50.0%
GTCCAGCAATGCTTCTGTCT+TGG + chr8_1:83849536-83849555 Msa1220640:three_prime_UTR 50.0%
!! TCCCAAGACAGAAGCATTGC+TGG - chr8_1:83849541-83849560 None:intergenic 50.0%
CACAGCACGTCTCAAATTCC+GGG - chr8_1:83849611-83849630 None:intergenic 50.0%
TCAGGAACGAGTTCCTACGT+AGG + chr8_1:83850609-83850628 Msa1220640:intron 50.0%
AGTTCCTACGTAGGATCGGT+GGG + chr8_1:83850618-83850637 Msa1220640:intron 50.0%
GGTTCGTAAGAACCCACTTG+AGG + chr8_1:83850676-83850695 Msa1220640:intron 50.0%
CATGGGTAGAGAGAGAACGA+CGG + chr8_1:83851089-83851108 Msa1220640:intron 50.0%
CAAACCCTAAACGCGAAAGG+GGG - chr8_1:83851143-83851162 None:intergenic 50.0%
CAGGAACGAGTTCCTGATAC+AGG - chr8_1:83851301-83851320 None:intergenic 50.0%
AACGAACCCAGGTAAGAACG+AGG + chr8_1:83851338-83851357 Msa1220640:intron 50.0%
AACGTGCCTCGTTCTTACCT+GGG - chr8_1:83851347-83851366 None:intergenic 50.0%
AAACGTGCCTCGTTCTTACC+TGG - chr8_1:83851348-83851367 None:intergenic 50.0%
! GAACGAGGCACGTTTTTGTG+TGG + chr8_1:83851353-83851372 Msa1220640:intron 50.0%
GCAGCTACATGTCAACGAAG+AGG - chr8_1:83851602-83851621 None:intergenic 50.0%
AGCCGGAGCTGGTAACATAT+GGG - chr8_1:83851864-83851883 None:intergenic 50.0%
! GTGGGCTATCTTATCCACAC+GGG + chr8_1:83852060-83852079 Msa1220640:intron 50.0%
! CTTATCCACACGGGCTTGTT+AGG + chr8_1:83852069-83852088 Msa1220640:intron 50.0%
ATTCACCTAACAAGCCCGTG+TGG - chr8_1:83852077-83852096 None:intergenic 50.0%
GGTATGACATCGGAACTCTG+TGG - chr8_1:83852393-83852412 None:intergenic 50.0%
CTACACTCCAGCATTCAGTC+AGG + chr8_1:83852445-83852464 Msa1220640:three_prime_UTR 50.0%
TAGCTACCCTGACTGAATGC+TGG - chr8_1:83852455-83852474 None:intergenic 50.0%
! TGGTACCGAGTGTTCCTGCT+AGG + chr8_1:83844896-83844915 Msa1220640:intron 55.0%
! GGTACCGAGTGTTCCTGCTA+GGG + chr8_1:83844897-83844916 Msa1220640:intron 55.0%
! CCCTTCAGGTTCTCAGGCTT+TGG + chr8_1:83844957-83844976 Msa1220640:intron 55.0%
CCCAAAGCCTGAGAACCTGA+AGG - chr8_1:83844961-83844980 None:intergenic 55.0%
TACGGTATGCACCAGCACCT+TGG - chr8_1:83845234-83845253 None:intergenic 55.0%
TCCCAAGCAGGATTTCGGCA+AGG + chr8_1:83848939-83848958 Msa1220640:three_prime_UTR 55.0%
! AGATGGATTTGGGAGGACGC+CGG + chr8_1:83848976-83848995 Msa1220640:three_prime_UTR 55.0%
!! GCGAGCTTTTGCGATGATGG+TGG + chr8_1:83849065-83849084 Msa1220640:three_prime_UTR 55.0%
! TAGCTCCAAAGCACCTGTGC+TGG + chr8_1:83849665-83849684 Msa1220640:three_prime_UTR 55.0%
! AGCTCCAAAGCACCTGTGCT+GGG + chr8_1:83849666-83849685 Msa1220640:three_prime_UTR 55.0%
CATACCCAGCACAGGTGCTT+TGG - chr8_1:83849673-83849692 None:intergenic 55.0%
GAGTTCCTACGTAGGATCGG+TGG + chr8_1:83850617-83850636 Msa1220640:intron 55.0%
GGTGAAGGGACGTAAGATCG+AGG + chr8_1:83850643-83850662 Msa1220640:intron 55.0%
AACGACGGCGAGAAATTCGC+CGG + chr8_1:83851104-83851123 Msa1220640:intron 55.0%
! AGGGGGCCAGTTCTCTTTTC+CGG - chr8_1:83851126-83851145 None:intergenic 55.0%
TTGGGCTTAACGAACCGGGT+CGG - chr8_1:83851239-83851258 None:intergenic 55.0%
GAGCCGGAGCTGGTAACATA+TGG - chr8_1:83851865-83851884 None:intergenic 55.0%
GTAGATAGAAGAGCCGGAGC+TGG - chr8_1:83851875-83851894 None:intergenic 55.0%
CTCTGTGGATAAGTGACGCG+AGG - chr8_1:83852378-83852397 None:intergenic 55.0%
CGAACGAGCATGGCCCAGAA+TGG - chr8_1:83849182-83849201 None:intergenic 60.0%
!! TAGGATCGGTGGGCTGGTGA+AGG + chr8_1:83850628-83850647 Msa1220640:intron 60.0%
!! AGGATCGGTGGGCTGGTGAA+GGG + chr8_1:83850629-83850648 Msa1220640:intron 60.0%
ATGGTAGCAGGCGGCAGCTA+AGG - chr8_1:83850915-83850934 None:intergenic 60.0%
ACTGGCCCCCTTTCGCGTTT+AGG + chr8_1:83851135-83851154 Msa1220640:intron 60.0%
CTGGCCCCCTTTCGCGTTTA+GGG + chr8_1:83851136-83851155 Msa1220640:intron 60.0%
TGGGCTTAACGAACCGGGTC+GGG - chr8_1:83851238-83851257 None:intergenic 60.0%
! GTGTGGGAAGCACGTAGGAG+CGG + chr8_1:83851370-83851389 Msa1220640:intron 60.0%
AGCGGACGATCCTACGTGCT+GGG + chr8_1:83851388-83851407 Msa1220640:intron 60.0%
AGGAACGAGTCCCAGCACGT+AGG - chr8_1:83851401-83851420 None:intergenic 60.0%
AAGTGGGAGATGGGGGAGCG+TGG + chr8_1:83849289-83849308 Msa1220640:three_prime_UTR 65.0%
! ATGGGGGAGCGTGGCCATAC+AGG + chr8_1:83849298-83849317 Msa1220640:three_prime_UTR 65.0%
CCAGCCCACCGATCCTACGT+AGG - chr8_1:83850625-83850644 None:intergenic 65.0%
CCTACGTAGGATCGGTGGGC+TGG + chr8_1:83850622-83850641 Msa1220640:intron 65.0%
GAGCGGACGATCCTACGTGC+TGG + chr8_1:83851387-83851406 Msa1220640:intron 65.0%
!! CTGCGTGCGCCGCACCGACG+AGG + chr8_1:83844649-83844668 Msa1220640:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 83844491 83852685 83844491 ID=Msa1220640;Name=Msa1220640
chr8_1 mRNA 83844491 83852685 83844491 ID=Msa1220640-mRNA-1;Parent=Msa1220640;Name=Msa1220640-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.84|0.78|1|0.30|0.28|14|2075|150
chr8_1 exon 83844491 83844670 83844491 ID=Msa1220640-mRNA-1:exon:30060;Parent=Msa1220640-mRNA-1
chr8_1 exon 83844699 83844840 83844699 ID=Msa1220640-mRNA-1:exon:30061;Parent=Msa1220640-mRNA-1
chr8_1 exon 83844973 83845040 83844973 ID=Msa1220640-mRNA-1:exon:30062;Parent=Msa1220640-mRNA-1
chr8_1 exon 83845145 83845359 83845145 ID=Msa1220640-mRNA-1:exon:30063;Parent=Msa1220640-mRNA-1
chr8_1 exon 83845493 83845540 83845493 ID=Msa1220640-mRNA-1:exon:30064;Parent=Msa1220640-mRNA-1
chr8_1 exon 83845643 83845789 83845643 ID=Msa1220640-mRNA-1:exon:30065;Parent=Msa1220640-mRNA-1
chr8_1 exon 83846743 83846827 83846743 ID=Msa1220640-mRNA-1:exon:30066;Parent=Msa1220640-mRNA-1
chr8_1 exon 83846915 83846996 83846915 ID=Msa1220640-mRNA-1:exon:30067;Parent=Msa1220640-mRNA-1
chr8_1 exon 83847207 83847388 83847207 ID=Msa1220640-mRNA-1:exon:30068;Parent=Msa1220640-mRNA-1
chr8_1 exon 83848856 83849119 83848856 ID=Msa1220640-mRNA-1:exon:30069;Parent=Msa1220640-mRNA-1
chr8_1 exon 83849289 83849423 83849289 ID=Msa1220640-mRNA-1:exon:30070;Parent=Msa1220640-mRNA-1
chr8_1 exon 83849514 83849687 83849514 ID=Msa1220640-mRNA-1:exon:30071;Parent=Msa1220640-mRNA-1
chr8_1 exon 83849805 83850066 83849805 ID=Msa1220640-mRNA-1:exon:30072;Parent=Msa1220640-mRNA-1
chr8_1 exon 83852142 83852685 83852142 ID=Msa1220640-mRNA-1:exon:30073;Parent=Msa1220640-mRNA-1
chr8_1 CDS 83844491 83844670 83844491 ID=Msa1220640-mRNA-1:cds;Parent=Msa1220640-mRNA-1
chr8_1 CDS 83844699 83844840 83844699 ID=Msa1220640-mRNA-1:cds;Parent=Msa1220640-mRNA-1
chr8_1 CDS 83844973 83845040 83844973 ID=Msa1220640-mRNA-1:cds;Parent=Msa1220640-mRNA-1
chr8_1 CDS 83845145 83845207 83845145 ID=Msa1220640-mRNA-1:cds;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83845208 83845359 83845208 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83845493 83845540 83845493 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83845643 83845789 83845643 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83846743 83846827 83846743 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83846915 83846996 83846915 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83847207 83847388 83847207 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83848856 83849119 83848856 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83849289 83849423 83849289 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83849514 83849687 83849514 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83849805 83850066 83849805 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
chr8_1 three_prime_UTR 83852142 83852685 83852142 ID=Msa1220640-mRNA-1:three_prime_utr;Parent=Msa1220640-mRNA-1
Gene Sequence

>Msa1220640

TCGTTGATTGTTGATGTTCTGTTTGACATTTTATCAATAACTCTTGCAAAAGATAATAGCCAAATTTGGCCAAACTTTCCTGTACATCTCCGTTTTTGGTGGGTTTGGCTTTCATCTACGATCTGTTGTGCTCTTCATGTGGGATTGGGTTTGTTTCACTGCGTGCGCCGCACCGACGAGATAGCTTTATCTGTGTCAAAGACTGGATTCTGCAATTGTTTTTTGTCTTTATCGGTACTTTCTGTGCCTTTGGAGGAGATCTTCCTACATCCCAATCTTGTGTTTTGTTTTTATGTGAAGGTACTGGCTGTGTTTGTGTCAGGCTTTGGGAAGTCCCAACTGTTTTCTGATCAAGCAAACTCAATTGAGATGGTTCTTATAGATGATGAGGTACCAAGATCCATGCCACAACAGAAAACACCTGCTGTATGTTTTTCAAAAGAAGTTAGTTGA
Protein sequence

>Msa1220640

SLIVDVLFDILSITLAKDNSQIWPNFPVHLRFWWVWLSSTICCALHVGLGLFHCVRRTDEIALSVSKTGFCNCFLSLSVLSVPLEEIFLHPNLVFCFYVKVLAVFVSGFGKSQLFSDQANSIEMVLIDDEVPRSMPQQKTPAVCFSKEVS*