AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1087780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 81 sgRNAs with CRISPR-Local

Find 569 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACAATTTCTAATCCTTTA+AGG 0.080010 7_3:-570148 None:intergenic
CCCTTCAGGTTCTCAGGCTT+TGG 0.169309 7_3:+562526 Msa1087780:five_prime_UTR
GGTTATGGTATTTACCTTAA+AGG 0.177209 7_3:+570134 Msa1087780:three_prime_UTR
ACCTTGAAATATCTTAATTT+TGG 0.179064 7_3:-563313 None:intergenic
ATAGAACTTGGTTTGTAAAA+AGG 0.186622 7_3:+567448 Msa1087780:three_prime_UTR
CAGGAAAGTTTGGCCAAATT+TGG 0.203592 7_3:-562119 None:intergenic
TTTACATATGGGTGGGTATA+TGG 0.239975 7_3:+570065 Msa1087780:three_prime_UTR
ATCTGGAAAATCGGCTTATA+TGG 0.256003 7_3:-562834 None:intergenic
CAAAAGATAATAGCCAAATT+TGG 0.257356 7_3:+562106 Msa1087780:five_prime_UTR
TGATAAATGTAATTCTTAAA+TGG 0.257696 7_3:+570113 Msa1087780:three_prime_UTR
AGTGACTGGCATAATTTCTT+TGG 0.279779 7_3:+567612 Msa1087780:three_prime_UTR
CCTTCAGGTTCTCAGGCTTT+GGG 0.301642 7_3:+562527 Msa1087780:five_prime_UTR
GAATACATGTTTCTCCCTTC+AGG 0.312296 7_3:+562512 Msa1087780:intron
ATGTAATTCTTAAATGGTTA+TGG 0.312875 7_3:+570119 Msa1087780:three_prime_UTR
ATCGGTACTTTCTGTGCCTT+TGG 0.339368 7_3:+562318 Msa1087780:five_prime_UTR
TTGTGCTCTTCATGTGGGAT+TGG 0.339462 7_3:+562185 Msa1087780:five_prime_UTR
AAACACCTTAATCAACAAAA+AGG 0.353161 7_3:+569881 Msa1087780:three_prime_UTR
GCCAAAATTAAGATATTTCA+AGG 0.354103 7_3:+563312 Msa1087780:CDS
CGGAGATGTACAGGAAAGTT+TGG 0.354907 7_3:-562129 None:intergenic
ACAAACAATTTGGTATGAAC+TGG 0.355757 7_3:+567535 Msa1087780:three_prime_UTR
GTTTCTCCCTTCAGGTTCTC+AGG 0.373131 7_3:+562520 Msa1087780:five_prime_UTR
ATTGTTTGTAAAGTTCTTAG+TGG 0.377003 7_3:+570164 Msa1087780:three_prime_UTR
TTGGTCTTCATCTGGAAAAT+CGG 0.387074 7_3:-562843 None:intergenic
TGTGCTCTTCATGTGGGATT+GGG 0.392277 7_3:+562186 Msa1087780:five_prime_UTR
TATGCACCTTGGTCTTCATC+TGG 0.408279 7_3:-562851 None:intergenic
GGAGCATTTATTCTGTTAAG+TGG 0.428647 7_3:-569923 None:intergenic
AAAATTACAAAACAGTTAGA+TGG 0.434531 7_3:+569757 Msa1087780:three_prime_UTR
CGATCTGTTGTTTGTTCAAG+AGG 0.442862 7_3:-561239 None:intergenic
TTTGAAACCTAGACTAGATC+TGG 0.447327 7_3:+561190 Msa1087780:five_prime_UTR
TAATAATCTGCAGAAATTGA+TGG 0.449075 7_3:+563248 Msa1087780:intron
ATTAAGGTGTTTAATTATCT+CGG 0.456197 7_3:-569870 None:intergenic
GCTTTATCTGTGTCAAAGAC+TGG 0.458792 7_3:+562271 Msa1087780:five_prime_UTR
AATAATCTGCAGAAATTGAT+GGG 0.464460 7_3:+563249 Msa1087780:intron
AAAACACAAGATTGGGATGT+AGG 0.467669 7_3:-562351 None:intergenic
AACTTCACAGCATCCTCAAT+GGG 0.477529 7_3:-563471 None:intergenic
GGTACTTTCTGTGCCTTTGG+AGG 0.478959 7_3:+562321 Msa1087780:five_prime_UTR
TTGCTTGATCAGAAAACAGT+TGG 0.480919 7_3:-562555 None:intergenic
TTGAAATAATAAGACCTCTC+AGG 0.482785 7_3:-570220 None:intergenic
CTGATGCACATAATAGAACT+TGG 0.489931 7_3:+567436 Msa1087780:three_prime_UTR
TTGACTTTATCTTAAGTGAC+TGG 0.490947 7_3:+567598 Msa1087780:three_prime_UTR
CTACACTCCAGCATTCAGTC+AGG 0.491182 7_3:+570014 Msa1087780:three_prime_UTR
ACTAAAACATTGCAGGTTGT+GGG 0.498362 7_3:+567357 Msa1087780:intron
ACTCACGAGAACACATGCTT+TGG 0.504832 7_3:+561159 Msa1087780:five_prime_UTR
AAACTTCACAGCATCCTCAA+TGG 0.505877 7_3:-563472 None:intergenic
GTATGAACTGGATTTATACA+AGG 0.513675 7_3:+567547 Msa1087780:three_prime_UTR
TGCTTGATCAGAAAACAGTT+GGG 0.516664 7_3:-562554 None:intergenic
ATTCAATTTCTTTATAAGAG+AGG 0.520657 7_3:-569980 None:intergenic
TGTTGTCTTCAAATCGCGTA+AGG 0.531554 7_3:+563337 Msa1087780:CDS
ATCTGTTGTGCTCTTCATGT+GGG 0.534876 7_3:+562180 Msa1087780:five_prime_UTR
ATTTGTTAATCCTCCCATTG+AGG 0.539391 7_3:+563458 Msa1087780:CDS
TGAGTTGCCAGATCTAGTCT+AGG 0.541106 7_3:-561197 None:intergenic
ATAATAAGACCTCTCAGGTA+TGG 0.542049 7_3:-570215 None:intergenic
TAGCTACCCTGACTGAATGC+TGG 0.551186 7_3:-570021 None:intergenic
GGAAAATCGGCTTATATGGA+TGG 0.553442 7_3:-562830 None:intergenic
TTACCGATCTGTTGTTCAAG+AGG 0.555393 7_3:-561269 None:intergenic
CAAGATGAAGACCAAGGTGC+TGG 0.561331 7_3:+562789 Msa1087780:CDS
GATCTGTTGTGCTCTTCATG+TGG 0.572556 7_3:+562179 Msa1087780:five_prime_UTR
TATATGGATGGAGCATAGTA+CGG 0.576323 7_3:-562818 None:intergenic
ATGCTGTGAAGTTTAGAGAT+GGG 0.581138 7_3:+563481 Msa1087780:CDS
GATGGTTCTTATAGATGATG+AGG 0.582262 7_3:+562588 Msa1087780:exon
CCCAAAGCCTGAGAACCTGA+AGG 0.585562 7_3:-562527 None:intergenic
ATAAGACCTCTCAGGTATGG+TGG 0.588796 7_3:-570212 None:intergenic
TTGATGGGGAAGTCTACTGA+TGG 0.605407 7_3:+563264 Msa1087780:CDS
TCAAGCAAACTCAATTGAGA+TGG 0.605515 7_3:+562570 Msa1087780:five_prime_UTR
TGAGTAGACAACAAAAGATG+TGG 0.606306 7_3:-567403 None:intergenic
TACGGTATGCACCAGCACCT+TGG 0.619060 7_3:-562800 None:intergenic
CCAAAGCCTGAGAACCTGAA+GGG 0.621517 7_3:-562526 None:intergenic
TCTCCTCTTGAACAACAGAT+CGG 0.622290 7_3:+561266 Msa1087780:five_prime_UTR
CTCTTGAACAAACAACAGAT+CGG 0.627137 7_3:+561240 Msa1087780:five_prime_UTR
GATGCTGTGAAGTTTAGAGA+TGG 0.635684 7_3:+563480 Msa1087780:CDS
CTCTGTGGATAAGTGACGCG+AGG 0.643850 7_3:-569944 None:intergenic
TTCACAGCATCCTCAATGGG+AGG 0.647538 7_3:-563468 None:intergenic
TACACTCCAGCATTCAGTCA+GGG 0.650026 7_3:+570015 Msa1087780:three_prime_UTR
CTTATTCCACCATACCTGAG+AGG 0.655666 7_3:+570206 Msa1087780:three_prime_UTR
TGTAGGAAGATCTCCTCCAA+AGG 0.658069 7_3:-562334 None:intergenic
TATGGTGGAATAAGACAATG+TGG 0.670263 7_3:-570197 None:intergenic
ATAATCTGCAGAAATTGATG+GGG 0.677044 7_3:+563250 Msa1087780:intron
AGATCTGGCAACTCAACTCG+CGG 0.700020 7_3:+561205 Msa1087780:five_prime_UTR
GGTATGACATCGGAACTCTG+TGG 0.706737 7_3:-569959 None:intergenic
TTATAAGAGAGGTATGACAT+CGG 0.711013 7_3:-569969 None:intergenic
GGTCTACAAGATGAAGACCA+AGG 0.728411 7_3:+562783 Msa1087780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATACATTAAAAAAATCA+AGG - chr7_3:562964-562983 None:intergenic 10.0%
!!! TTTAAATATTCTATTTTTAG+TGG + chr7_3:563117-563136 Msa1087780:intron 10.0%
!!! TTAAATATTCTATTTTTAGT+GGG + chr7_3:563118-563137 Msa1087780:intron 10.0%
!! AAAAAAAAAACTATAACAAA+CGG - chr7_3:563791-563810 None:intergenic 10.0%
!!! CATTTTGTTATAATTTTTTT+TGG + chr7_3:563938-563957 Msa1087780:intron 10.0%
!! TAAAAAAAAAAATATCACTA+TGG + chr7_3:568397-568416 Msa1087780:intron 10.0%
!! AAAAAAAAAAATATCACTAT+GGG + chr7_3:568398-568417 Msa1087780:intron 10.0%
!! AAACAATATCGAATAAAAAT+AGG + chr7_3:561365-561384 Msa1087780:intron 15.0%
!!! AATGAAAAAGAGAAATTTTT+TGG - chr7_3:561500-561519 None:intergenic 15.0%
!!! AATGAAAAAGAGAAATTTTT+TGG - chr7_3:561500-561519 None:intergenic 15.0%
!!! AATGAAAAAGAGAAATTTTT+TGG - chr7_3:561500-561519 None:intergenic 15.0%
!!! AATGAAAAAGAGAAATTTTT+TGG - chr7_3:561500-561519 None:intergenic 15.0%
!! AAAAAAAAACTATAACAAAC+GGG - chr7_3:563790-563809 None:intergenic 15.0%
!!! ATTTCTAAAAATGGATTTTT+TGG - chr7_3:564177-564196 None:intergenic 15.0%
!!! TTTCTTTGTATTTCTAAAAA+TGG - chr7_3:564186-564205 None:intergenic 15.0%
!!! TGTTTTAAATCTAAAACAAA+CGG + chr7_3:564214-564233 Msa1087780:intron 15.0%
!! TAGATAAAGTTTAAAAAACA+TGG - chr7_3:564680-564699 None:intergenic 15.0%
!! AATAAAATATGAAACATTCA+TGG + chr7_3:565015-565034 Msa1087780:intron 15.0%
!!! ACTATCTTATTGATTAATTA+AGG - chr7_3:565644-565663 None:intergenic 15.0%
!!! ATTGATTCTTAATTAATTGT+AGG + chr7_3:565679-565698 Msa1087780:intron 15.0%
!! AACAAATAAATGTATCAAAA+AGG - chr7_3:565882-565901 None:intergenic 15.0%
!! TAGATAAAATTCAAATGAAA+GGG - chr7_3:565911-565930 None:intergenic 15.0%
!! ATAGATAAAATTCAAATGAA+AGG - chr7_3:565912-565931 None:intergenic 15.0%
!! AATGAAAAAGAGAAAAAATT+TGG - chr7_3:565990-566009 None:intergenic 15.0%
!! AAAATCCAATTAAAAATAGA+GGG - chr7_3:566056-566075 None:intergenic 15.0%
!! AAAAATCCAATTAAAAATAG+AGG - chr7_3:566057-566076 None:intergenic 15.0%
!! AAAATTAATTAGAAATAGAG+GGG - chr7_3:566296-566315 None:intergenic 15.0%
!! CAAAATTAATTAGAAATAGA+GGG - chr7_3:566297-566316 None:intergenic 15.0%
!! ACAAAATTAATTAGAAATAG+AGG - chr7_3:566298-566317 None:intergenic 15.0%
!!! TTCAAATTTTACAAACAATT+TGG + chr7_3:567525-567544 Msa1087780:three_prime_UTR 15.0%
!! TAAAGGAAAAAAGAATAAAT+CGG + chr7_3:567700-567719 Msa1087780:intron 15.0%
!!! AGAAAGTATATTATTAACTA+AGG + chr7_3:568323-568342 Msa1087780:intron 15.0%
!!! GAAAGTATATTATTAACTAA+GGG + chr7_3:568324-568343 Msa1087780:intron 15.0%
!! AAAGTATATTATTAACTAAG+GGG + chr7_3:568325-568344 Msa1087780:intron 15.0%
!!! GTAAGAAAGTATAAAAAAAA+AGG + chr7_3:568349-568368 Msa1087780:intron 15.0%
!!! TGTAAAGTGAAAATATATTT+TGG - chr7_3:569275-569294 None:intergenic 15.0%
!! TCATTTGTAAATAAGTAAAT+AGG + chr7_3:569474-569493 Msa1087780:intron 15.0%
!!! TGTTGTATTTTATTTACATA+TGG + chr7_3:570053-570072 Msa1087780:three_prime_UTR 15.0%
!!! GTTGTATTTTATTTACATAT+GGG + chr7_3:570054-570073 Msa1087780:three_prime_UTR 15.0%
!! TGATAAATGTAATTCTTAAA+TGG + chr7_3:570113-570132 Msa1087780:three_prime_UTR 15.0%
!! AAAATCCAAGTAAAAATAGA+GGG - chr7_3:561431-561450 None:intergenic 20.0%
!! AAAAATCCAAGTAAAAATAG+AGG - chr7_3:561432-561451 None:intergenic 20.0%
!! TAAATCCAAGTAAAAATAGA+GGG - chr7_3:561722-561741 None:intergenic 20.0%
!! ATAAATCCAAGTAAAAATAG+AGG - chr7_3:561723-561742 None:intergenic 20.0%
!! AAAATCGAAGTAAAAATAGA+GGG - chr7_3:561857-561876 None:intergenic 20.0%
!! AAAAATCGAAGTAAAAATAG+AGG - chr7_3:561858-561877 None:intergenic 20.0%
!! TTGTACAAGTAAAAATTGAA+TGG - chr7_3:561814-561833 None:intergenic 20.0%
!! TAAATCCAATTAGAAATAGA+GGG - chr7_3:561993-562012 None:intergenic 20.0%
!! ATAAATCCAATTAGAAATAG+AGG - chr7_3:561994-562013 None:intergenic 20.0%
!!! AGGTTTTTTTTGTGTAATTT+TGG + chr7_3:562238-562257 Msa1087780:five_prime_UTR 20.0%
!!! CAATTGTTTTTTGTCTTTAT+CGG + chr7_3:562300-562319 Msa1087780:five_prime_UTR 20.0%
!! TAAAAACAAAACACAAGATT+GGG - chr7_3:562361-562380 None:intergenic 20.0%
!! ATAAAAACAAAACACAAGAT+TGG - chr7_3:562362-562381 None:intergenic 20.0%
!! AACAATCTATAACTAACAAA+GGG - chr7_3:562624-562643 None:intergenic 20.0%
!!! AAGAAAAGTTTTTACAAACA+TGG + chr7_3:562931-562950 Msa1087780:intron 20.0%
!!! ACCTTGAAATATCTTAATTT+TGG - chr7_3:563316-563335 None:intergenic 20.0%
!!! TTTTGAATACTTTGCATATA+AGG + chr7_3:563401-563420 Msa1087780:CDS 20.0%
!!! GAAATAATTTTAAGCTCATT+TGG - chr7_3:564134-564153 None:intergenic 20.0%
!!! GTTTTAAATCTAAAACAAAC+GGG + chr7_3:564215-564234 Msa1087780:intron 20.0%
!! TAACTAATGTGAAAATATTG+GGG - chr7_3:564976-564995 None:intergenic 20.0%
!! CTAACTAATGTGAAAATATT+GGG - chr7_3:564977-564996 None:intergenic 20.0%
!! TCTAACTAATGTGAAAATAT+TGG - chr7_3:564978-564997 None:intergenic 20.0%
!! TTCCAATATTAAGAAAAGAA+GGG - chr7_3:565181-565200 None:intergenic 20.0%
!! ATTCCAATATTAAGAAAAGA+AGG - chr7_3:565182-565201 None:intergenic 20.0%
!! AAAATTACCATCTATGATTT+AGG - chr7_3:565394-565413 None:intergenic 20.0%
!! AGATAAAATTCAAATGAAAG+GGG - chr7_3:565910-565929 None:intergenic 20.0%
!! AAAGAGAAAAAATTTGGATA+CGG - chr7_3:565984-566003 None:intergenic 20.0%
!! AAATTAATTAGAAATAGAGG+GGG - chr7_3:566295-566314 None:intergenic 20.0%
!!! TACAAAACTGAATCATTTTT+TGG - chr7_3:566412-566431 None:intergenic 20.0%
!!! AAAAAATGATTCAGTTTTGT+AGG + chr7_3:566411-566430 Msa1087780:intron 20.0%
!! GTTTAGAAAATTCTAATCAA+TGG + chr7_3:566803-566822 Msa1087780:intron 20.0%
!!! GTTGAAAATTTCTGAAAAAA+TGG - chr7_3:567156-567175 None:intergenic 20.0%
!!! GATCATATTTTGAGAAAATT+GGG + chr7_3:567379-567398 Msa1087780:CDS 20.0%
!! GTATAGAACAGAATAAATAA+AGG + chr7_3:567683-567702 Msa1087780:intron 20.0%
!! AAAGGAAAAAAGAATAAATC+GGG + chr7_3:567701-567720 Msa1087780:intron 20.0%
!! AGTAAAGTCAAATATATAGA+CGG - chr7_3:567840-567859 None:intergenic 20.0%
!! AAAACTATAAGTACTTAAAC+TGG - chr7_3:568073-568092 None:intergenic 20.0%
!! AGAATCTATAAAAGGAAAAA+GGG + chr7_3:568096-568115 Msa1087780:intron 20.0%
!! AAGTATATTATTAACTAAGG+GGG + chr7_3:568326-568345 Msa1087780:intron 20.0%
!!! TCACTCTTTTATATAGTATT+GGG - chr7_3:568429-568448 None:intergenic 20.0%
!!! TTCACTCTTTTATATAGTAT+TGG - chr7_3:568430-568449 None:intergenic 20.0%
!!! TTTTAGCGTATATATAAAAC+CGG + chr7_3:568768-568787 Msa1087780:intron 20.0%
!! TATCTTAACTTTATTCTTTC+TGG - chr7_3:569094-569113 None:intergenic 20.0%
!! AGAAAGAATAAAGTTAAGAT+AGG + chr7_3:569093-569112 Msa1087780:intron 20.0%
!! AGGAAAATTGTAAATAGATA+AGG + chr7_3:569204-569223 Msa1087780:intron 20.0%
!!! GAAAATACATTTTGTAATAG+AGG + chr7_3:569226-569245 Msa1087780:intron 20.0%
!!! TAAAATTAATTTTACCTGCA+AGG + chr7_3:569515-569534 Msa1087780:intron 20.0%
!! AAAAGAAATATTTCATTGTC+TGG - chr7_3:569593-569612 None:intergenic 20.0%
!!! TGAAATATTTCTTTTCATTG+AGG + chr7_3:569598-569617 Msa1087780:intron 20.0%
!!! TGTAATTTTATTCAGGAATT+GGG - chr7_3:569746-569765 None:intergenic 20.0%
!!! TTGTAATTTTATTCAGGAAT+TGG - chr7_3:569747-569766 None:intergenic 20.0%
!!! ACTGTTTTGTAATTTTATTC+AGG - chr7_3:569753-569772 None:intergenic 20.0%
!! AAAATTACAAAACAGTTAGA+TGG + chr7_3:569757-569776 Msa1087780:three_prime_UTR 20.0%
!!! TTTAACAGATTTGTTTTTAC+AGG + chr7_3:569810-569829 Msa1087780:three_prime_UTR 20.0%
!!! ATTAAGGTGTTTAATTATCT+CGG - chr7_3:569873-569892 None:intergenic 20.0%
!! ATTCAATTTCTTTATAAGAG+AGG - chr7_3:569983-570002 None:intergenic 20.0%
!!! TATTTTATTTACATATGGGT+GGG + chr7_3:570058-570077 Msa1087780:three_prime_UTR 20.0%
!! ATGTAATTCTTAAATGGTTA+TGG + chr7_3:570119-570138 Msa1087780:three_prime_UTR 20.0%
!! AAACAATTTCTAATCCTTTA+AGG - chr7_3:570151-570170 None:intergenic 20.0%
!!! TTTGTTGATTTTCTGATTGT+AGG + chr7_3:561449-561468 Msa1087780:intron 25.0%
! TAAATCCAAGTAAAAACAGA+GGG - chr7_3:561566-561585 None:intergenic 25.0%
! ATAAATCCAAGTAAAAACAG+AGG - chr7_3:561567-561586 None:intergenic 25.0%
!!! TATGTTGATTTTCTGATTGT+AGG + chr7_3:561584-561603 Msa1087780:intron 25.0%
! TTGTACAAGTACAAATTGAA+TGG - chr7_3:561679-561698 None:intergenic 25.0%
!!! TATGTTGATTTTCTGATTGT+AGG + chr7_3:561584-561603 Msa1087780:intron 25.0%
! AAATCCAATTAGAAATAGAG+GGG - chr7_3:561992-562011 None:intergenic 25.0%
!! TATATTGATTGTCTGTTTGT+AGG + chr7_3:562036-562055 Msa1087780:intron 25.0%
! CAAAAGATAATAGCCAAATT+TGG + chr7_3:562106-562125 Msa1087780:five_prime_UTR 25.0%
!!! TGTGTTTTGTTTTTATGTGA+AGG + chr7_3:562366-562385 Msa1087780:five_prime_UTR 25.0%
!!! TAGGGTTGATTCAATTTTTT+TGG + chr7_3:562484-562503 Msa1087780:intron 25.0%
!!! AGGGTTGATTCAATTTTTTT+GGG + chr7_3:562485-562504 Msa1087780:intron 25.0%
! CAACAATCTATAACTAACAA+AGG - chr7_3:562625-562644 None:intergenic 25.0%
! AGTTACATTCTACATTTGTT+TGG + chr7_3:562661-562680 Msa1087780:intron 25.0%
! TTTCAAAAGAAGTTAGTTGA+AGG + chr7_3:562757-562776 Msa1087780:intron 25.0%
!!! CTATTTTTAGTGGGAAATTT+TGG + chr7_3:563127-563146 Msa1087780:intron 25.0%
! TAATAATCTGCAGAAATTGA+TGG + chr7_3:563248-563267 Msa1087780:intron 25.0%
! AATAATCTGCAGAAATTGAT+GGG + chr7_3:563249-563268 Msa1087780:intron 25.0%
! GCCAAAATTAAGATATTTCA+AGG + chr7_3:563312-563331 Msa1087780:CDS 25.0%
!!! TTTGCAAGCATTGTTTTTAA+AGG + chr7_3:563373-563392 Msa1087780:intron 25.0%
!! TTTCTGCTATTTACTTCATT+TGG + chr7_3:563509-563528 Msa1087780:intron 25.0%
!!! TTTTTGTTTTAGTGTTGTGA+TGG + chr7_3:563578-563597 Msa1087780:intron 25.0%
!!! TTTTGTTTTAGTGTTGTGAT+GGG + chr7_3:563579-563598 Msa1087780:intron 25.0%
! AATAATGTGTACTTTGTCTT+GGG - chr7_3:564261-564280 None:intergenic 25.0%
! TAATAATGTGTACTTTGTCT+TGG - chr7_3:564262-564281 None:intergenic 25.0%
!!! AGTATATACTTCACTTTTTC+AGG + chr7_3:564462-564481 Msa1087780:intron 25.0%
!!! GTATATACTTCACTTTTTCA+GGG + chr7_3:564463-564482 Msa1087780:intron 25.0%
!!! TATATACTTCACTTTTTCAG+GGG + chr7_3:564464-564483 Msa1087780:intron 25.0%
!!! TTGATTCCATGTTTTGAATT+TGG + chr7_3:564597-564616 Msa1087780:intron 25.0%
! AAACAAAACTACATCTGAAA+AGG - chr7_3:564707-564726 None:intergenic 25.0%
!!! TCAAGATGTATTTTAGCATT+TGG + chr7_3:564848-564867 Msa1087780:intron 25.0%
! AAATAACTAATGCTAACAAC+AGG - chr7_3:565157-565176 None:intergenic 25.0%
! TCCAATATTAAGAAAAGAAG+GGG - chr7_3:565180-565199 None:intergenic 25.0%
! ATACACATTCACTTTAACAT+AGG + chr7_3:565275-565294 Msa1087780:intron 25.0%
!!! TAATTTTGACCGAAATGATT+TGG + chr7_3:565407-565426 Msa1087780:intron 25.0%
!! ATAGTAAAGATCAGTTTTTC+AGG - chr7_3:565437-565456 None:intergenic 25.0%
! GAATAAAGCTAGTTAGAAAA+AGG - chr7_3:565509-565528 None:intergenic 25.0%
! TAAATGAATTGAGTTCAACA+TGG + chr7_3:565543-565562 Msa1087780:intron 25.0%
! ATAAGATAGTACACAATTCT+TGG + chr7_3:565654-565673 Msa1087780:intron 25.0%
! ATTATTTGAATCATCCACTA+TGG + chr7_3:565703-565722 Msa1087780:intron 25.0%
!!! ATTGTATCTTTGTTGTTAGT+TGG + chr7_3:565813-565832 Msa1087780:intron 25.0%
! GAAATCACTTTACTGAATAT+AGG + chr7_3:565939-565958 Msa1087780:intron 25.0%
!!! GATGAAAAGGAGAATTTTTT+TGG - chr7_3:566226-566245 None:intergenic 25.0%
! AAAAACTGAATCAGATGAAA+AGG - chr7_3:566239-566258 None:intergenic 25.0%
!! TTGTTGTATGATTTTCTGTT+TGG + chr7_3:566317-566336 Msa1087780:intron 25.0%
!!! AGGACAAGAAATTTTTAGAA+GGG - chr7_3:566704-566723 None:intergenic 25.0%
!!! TTTTTCAGAAATTTTCAACC+CGG + chr7_3:567157-567176 Msa1087780:intron 25.0%
!! CAATATTCTAAAAAGCACAT+TGG + chr7_3:567291-567310 Msa1087780:intron 25.0%
!!! GGATCATATTTTGAGAAAAT+TGG + chr7_3:567378-567397 Msa1087780:CDS 25.0%
!!! ATAGAACTTGGTTTGTAAAA+AGG + chr7_3:567448-567467 Msa1087780:three_prime_UTR 25.0%
! AAGGAAAAAAGAATAAATCG+GGG + chr7_3:567702-567721 Msa1087780:intron 25.0%
! TTCTAATCTCAAAATTGCTT+TGG + chr7_3:567728-567747 Msa1087780:intron 25.0%
!! TTACTCACCAAAATATCTTT+TGG + chr7_3:567855-567874 Msa1087780:intron 25.0%
!!! TTTTTTCCAGATATCCTTTT+AGG - chr7_3:567958-567977 None:intergenic 25.0%
! TGAATAATAATCCTGATACT+TGG - chr7_3:568020-568039 None:intergenic 25.0%
!! GTTTTCAGAGAATCTATAAA+AGG + chr7_3:568088-568107 Msa1087780:intron 25.0%
! GAGAATCTATAAAAGGAAAA+AGG + chr7_3:568095-568114 Msa1087780:intron 25.0%
! AGTATATTATTAACTAAGGG+GGG + chr7_3:568327-568346 Msa1087780:intron 25.0%
! AGGTATATTTAGTATCAATC+TGG + chr7_3:568369-568388 Msa1087780:intron 25.0%
! GGTATATTTAGTATCAATCT+GGG + chr7_3:568370-568389 Msa1087780:intron 25.0%
! TTTAGCGTATATATAAAACC+GGG + chr7_3:568769-568788 Msa1087780:intron 25.0%
! ATTGTAATCAGTTATGATCA+AGG - chr7_3:568998-569017 None:intergenic 25.0%
!!! ACTATAAAAACTTGGTTTTC+TGG + chr7_3:569706-569725 Msa1087780:intron 25.0%
!! GTAATTTTATTCAGGAATTG+GGG - chr7_3:569745-569764 None:intergenic 25.0%
!!! TTTTTACAGGTTATTTCATG+TGG + chr7_3:569823-569842 Msa1087780:three_prime_UTR 25.0%
! AAACACCTTAATCAACAAAA+AGG + chr7_3:569881-569900 Msa1087780:three_prime_UTR 25.0%
!!! GTATTTTATTTACATATGGG+TGG + chr7_3:570057-570076 Msa1087780:three_prime_UTR 25.0%
! ATTGTTTGTAAAGTTCTTAG+TGG + chr7_3:570164-570183 Msa1087780:three_prime_UTR 25.0%
!!! TCAATCCCTCTATTTTTACT+TGG + chr7_3:561423-561442 Msa1087780:intron 30.0%
GGAATGAAAAGCAAATTGAA+TGG - chr7_3:561658-561677 None:intergenic 30.0%
!!! TCAATCCCTCTATTTTTACT+TGG + chr7_3:561423-561442 Msa1087780:intron 30.0%
TTACACAAAAAAAACCTCGT+CGG - chr7_3:562235-562254 None:intergenic 30.0%
!!! TTGTTTTTATGTGAAGGTAC+TGG + chr7_3:562372-562391 Msa1087780:intron 30.0%
!!! GGGTTGATTCAATTTTTTTG+GGG + chr7_3:562486-562505 Msa1087780:intron 30.0%
TACATTCTACATTTGTTTGG+TGG + chr7_3:562664-562683 Msa1087780:intron 30.0%
!! TCTTTTGAAAAACATACAGC+AGG - chr7_3:562747-562766 None:intergenic 30.0%
GTCTTGCTAATCAAATGATT+TGG + chr7_3:562990-563009 Msa1087780:intron 30.0%
!! TGCTAATCAAATGATTTGGT+TGG + chr7_3:562994-563013 Msa1087780:intron 30.0%
TAACTCAAACACAAACATCA+AGG - chr7_3:563079-563098 None:intergenic 30.0%
TTTAAATGAGTACCTGTCAT+CGG - chr7_3:563103-563122 None:intergenic 30.0%
!! TTTTTAGTGGGAAATTTTGG+TGG + chr7_3:563130-563149 Msa1087780:intron 30.0%
AAAATTGAGTGTGAGTTGTT+TGG + chr7_3:563216-563235 Msa1087780:intron 30.0%
ATAATCTGCAGAAATTGATG+GGG + chr7_3:563250-563269 Msa1087780:intron 30.0%
GCAAATTGAAAAACAACATC+AGG - chr7_3:563294-563313 None:intergenic 30.0%
! TTTTGACATTAAGTGCAGTA+TGG + chr7_3:563539-563558 Msa1087780:intron 30.0%
TAATCAACACAACGAAAATG+AGG + chr7_3:563673-563692 Msa1087780:intron 30.0%
ATAATGTGTACTTTGTCTTG+GGG - chr7_3:564260-564279 None:intergenic 30.0%
TAATGAAGTGAATTGAACAC+AGG + chr7_3:564290-564309 Msa1087780:intron 30.0%
GAATCTTCTAATCTCATTGT+TGG + chr7_3:564342-564361 Msa1087780:intron 30.0%
TAGAGATTGCTTGTTCATAA+GGG - chr7_3:564539-564558 None:intergenic 30.0%
ATAGAGATTGCTTGTTCATA+AGG - chr7_3:564540-564559 None:intergenic 30.0%
AACAAGCAATCTCTATTACT+GGG + chr7_3:564544-564563 Msa1087780:intron 30.0%
CTTTGGATGTGAAAAATTGA+TGG + chr7_3:564629-564648 Msa1087780:intron 30.0%
GTGTAAATGCTGTCAAATAA+TGG - chr7_3:564765-564784 None:intergenic 30.0%
TTAACTTCTATTCAGAAGAG+AGG + chr7_3:564800-564819 Msa1087780:intron 30.0%
!!! GTATTTTAGCATTTGGTCAT+TGG + chr7_3:564855-564874 Msa1087780:intron 30.0%
! GGTTCTATGTTGATTACAAT+TGG + chr7_3:564876-564895 Msa1087780:intron 30.0%
! TCTATGTTGATTACAATTGG+TGG + chr7_3:564879-564898 Msa1087780:intron 30.0%
! TCCCCTTCTTTTCTTAATAT+TGG + chr7_3:565176-565195 Msa1087780:intron 30.0%
! ACATAGGAATTCCAGAATTT+TGG + chr7_3:565291-565310 Msa1087780:intron 30.0%
GTTAGAAAAAGGCAATAGTT+GGG - chr7_3:565498-565517 None:intergenic 30.0%
AGTTAGAAAAAGGCAATAGT+TGG - chr7_3:565499-565518 None:intergenic 30.0%
AAATCATTAGAGAAATGCCA+AGG - chr7_3:565732-565751 None:intergenic 30.0%
!! TCTTTGTTGTTAGTTGGATT+TGG + chr7_3:565819-565838 Msa1087780:intron 30.0%
!!! TCTCTCCCTCTATTTTTAAT+TGG + chr7_3:566048-566067 Msa1087780:intron 30.0%
!!! TGTACTGATTTTCTGATTGT+AGG + chr7_3:566082-566101 Msa1087780:intron 30.0%
! GTGAAATACAAGATGGATTT+GGG + chr7_3:566535-566554 Msa1087780:intron 30.0%
ATTCGATGCGTTTGAATAAT+TGG + chr7_3:566591-566610 Msa1087780:intron 30.0%
ATGCGTTTGAATAATTGGAT+TGG + chr7_3:566596-566615 Msa1087780:intron 30.0%
TGCGTTTGAATAATTGGATT+GGG + chr7_3:566597-566616 Msa1087780:intron 30.0%
!! AAAGCTCGCAAAAAGTATTA+CGG - chr7_3:566623-566642 None:intergenic 30.0%
!! GGACAAGAAATTTTTAGAAG+GGG - chr7_3:566703-566722 None:intergenic 30.0%
!! CAGGACAAGAAATTTTTAGA+AGG - chr7_3:566705-566724 None:intergenic 30.0%
TTTGTCTACTAAAACATTGC+AGG + chr7_3:567350-567369 Msa1087780:intron 30.0%
ACAAACAATTTGGTATGAAC+TGG + chr7_3:567535-567554 Msa1087780:three_prime_UTR 30.0%
GTATGAACTGGATTTATACA+AGG + chr7_3:567547-567566 Msa1087780:three_prime_UTR 30.0%
TTGACTTTATCTTAAGTGAC+TGG + chr7_3:567598-567617 Msa1087780:three_prime_UTR 30.0%
CAATTACAAAACAAAATGCC+AGG + chr7_3:567646-567665 Msa1087780:intron 30.0%
!! ATACCATATTTTTGTGATCC+TGG - chr7_3:567667-567686 None:intergenic 30.0%
AGGAAAAAAGAATAAATCGG+GGG + chr7_3:567703-567722 Msa1087780:intron 30.0%
! GGAATTTTGAGCAATTTCAT+CGG + chr7_3:567893-567912 Msa1087780:intron 30.0%
AAAAGGGAATAATAATGCAG+AGG + chr7_3:568112-568131 Msa1087780:intron 30.0%
TAATCATAACCAATGTAGTC+AGG + chr7_3:568160-568179 Msa1087780:intron 30.0%
!! CTTTTATATAGTATTGGGCT+AGG - chr7_3:568424-568443 None:intergenic 30.0%
GAGAAAAGAGAGAATAACTA+GGG - chr7_3:568462-568481 None:intergenic 30.0%
AAAATGGTTAGAGAAGAAGA+AGG - chr7_3:568528-568547 None:intergenic 30.0%
! TCTGTTTTCATTTTCTCTCA+TGG - chr7_3:568637-568656 None:intergenic 30.0%
AGAAAATGAAAACAGAGCAT+GGG + chr7_3:568641-568660 Msa1087780:intron 30.0%
ATCGGAGAATGAAAAATTTC+TGG + chr7_3:568744-568763 Msa1087780:intron 30.0%
TCGGAGAATGAAAAATTTCT+GGG + chr7_3:568745-568764 Msa1087780:intron 30.0%
ACTGATTACAATGAATCTGA+TGG + chr7_3:569006-569025 Msa1087780:intron 30.0%
ATTGGCAAGGTTAAAAGTTA+GGG - chr7_3:569381-569400 None:intergenic 30.0%
AATTGGCAAGGTTAAAAGTT+AGG - chr7_3:569382-569401 None:intergenic 30.0%
! GTTTTTATAGTCGAGAGAAA+TGG - chr7_3:569697-569716 None:intergenic 30.0%
TTCTCTCGACTATAAAAACT+TGG + chr7_3:569698-569717 Msa1087780:intron 30.0%
ACCTTAATCAACAAAAAGGT+GGG + chr7_3:569885-569904 Msa1087780:three_prime_UTR 30.0%
! TTATAAGAGAGGTATGACAT+CGG - chr7_3:569972-569991 None:intergenic 30.0%
GGTTATGGTATTTACCTTAA+AGG + chr7_3:570134-570153 Msa1087780:three_prime_UTR 30.0%
TTGAAATAATAAGACCTCTC+AGG - chr7_3:570223-570242 None:intergenic 30.0%
! TTTGAAACCTAGACTAGATC+TGG + chr7_3:561190-561209 Msa1087780:five_prime_UTR 35.0%
CTCTTGAACAAACAACAGAT+CGG + chr7_3:561240-561259 Msa1087780:five_prime_UTR 35.0%
!!! TCAATCCCTCTGTTTTTACT+TGG + chr7_3:561558-561577 Msa1087780:intron 35.0%
AAAACACAAGATTGGGATGT+AGG - chr7_3:562354-562373 None:intergenic 35.0%
TTCTGACTCTTCAAGTAGTT+TGG + chr7_3:562445-562464 Msa1087780:intron 35.0%
AAAATTGAATCAACCCTAGC+AGG - chr7_3:562482-562501 None:intergenic 35.0%
TGCTTGATCAGAAAACAGTT+GGG - chr7_3:562557-562576 None:intergenic 35.0%
TTGCTTGATCAGAAAACAGT+TGG - chr7_3:562558-562577 None:intergenic 35.0%
TCAAGCAAACTCAATTGAGA+TGG + chr7_3:562570-562589 Msa1087780:five_prime_UTR 35.0%
GATGGTTCTTATAGATGATG+AGG + chr7_3:562588-562607 Msa1087780:exon 35.0%
! CTACATTTGTTTGGTGGAAA+TGG + chr7_3:562670-562689 Msa1087780:intron 35.0%
AAAGAAGTTAGTTGAAGGAG+AGG + chr7_3:562762-562781 Msa1087780:intron 35.0%
TATATGGATGGAGCATAGTA+CGG - chr7_3:562821-562840 None:intergenic 35.0%
! ATCTGGAAAATCGGCTTATA+TGG - chr7_3:562837-562856 None:intergenic 35.0%
! TTGGTCTTCATCTGGAAAAT+CGG - chr7_3:562846-562865 None:intergenic 35.0%
ATCTTCATTACTATGCACCT+TGG - chr7_3:562865-562884 None:intergenic 35.0%
ATGAAGATTGATGTAGCTTC+TGG + chr7_3:562877-562896 Msa1087780:intron 35.0%
GCTGATTACGACTATTTAGT+TGG + chr7_3:562907-562926 Msa1087780:intron 35.0%
!! ATGATTTGGTTGGATGTCAT+TGG + chr7_3:563004-563023 Msa1087780:intron 35.0%
! ATTTCTGCTGAGAGTATATC+AGG + chr7_3:563040-563059 Msa1087780:intron 35.0%
! TTTCTGCTGAGAGTATATCA+GGG + chr7_3:563041-563060 Msa1087780:intron 35.0%
! ATTTGTTAATCCTCCCATTG+AGG + chr7_3:563458-563477 Msa1087780:CDS 35.0%
ATGCTGTGAAGTTTAGAGAT+GGG + chr7_3:563481-563500 Msa1087780:CDS 35.0%
!! ATAACAAACGGGCTCAATTT+TGG - chr7_3:563779-563798 None:intergenic 35.0%
ATTTCACAAAGAGCAATGAG+TGG + chr7_3:564370-564389 Msa1087780:intron 35.0%
GAACAAGCAATCTCTATTAC+TGG + chr7_3:564543-564562 Msa1087780:intron 35.0%
CCATCTCCAAATTCAAAACA+TGG - chr7_3:564606-564625 None:intergenic 35.0%
!! CCATGTTTTGAATTTGGAGA+TGG + chr7_3:564603-564622 Msa1087780:intron 35.0%
GAATTTGGAGATGGTAACTT+TGG + chr7_3:564612-564631 Msa1087780:intron 35.0%
! GATTACAATTGGTGGACATA+TGG + chr7_3:564887-564906 Msa1087780:intron 35.0%
! CAACGATAGTCTGCATATTT+TGG + chr7_3:565116-565135 Msa1087780:intron 35.0%
!! AATTTTGGCCTGATACAGAT+TGG + chr7_3:565306-565325 Msa1087780:intron 35.0%
AGACAAATCCAATCTGTATC+AGG - chr7_3:565317-565336 None:intergenic 35.0%
ATACAGATTGGATTTGTCTC+AGG + chr7_3:565318-565337 Msa1087780:intron 35.0%
GTAGTCACCTAAATCATAGA+TGG + chr7_3:565384-565403 Msa1087780:intron 35.0%
CTGTTTGGAAGATTCTTTGT+AGG + chr7_3:566332-566351 Msa1087780:intron 35.0%
TGTAGGATTGTGATAGATGT+TGG + chr7_3:566428-566447 Msa1087780:intron 35.0%
TTGATCTTGAGGACAAAATC+CGG - chr7_3:566455-566474 None:intergenic 35.0%
TGTCTCAAATGTTGATCTTG+AGG - chr7_3:566466-566485 None:intergenic 35.0%
AGGAAACGTGAAATACAAGA+TGG + chr7_3:566528-566547 Msa1087780:intron 35.0%
! CGTGAAATACAAGATGGATT+TGG + chr7_3:566534-566553 Msa1087780:intron 35.0%
! AAATACAAGATGGATTTGGG+AGG + chr7_3:566538-566557 Msa1087780:intron 35.0%
AGCATATGAACTCGATTTAC+CGG - chr7_3:566567-566586 None:intergenic 35.0%
!! GAAATTTTTAGAAGGGGACT+GGG - chr7_3:566697-566716 None:intergenic 35.0%
!! AGAAATTTTTAGAAGGGGAC+TGG - chr7_3:566698-566717 None:intergenic 35.0%
TGATCCAGTAACATAAGAAG+TGG + chr7_3:566839-566858 Msa1087780:intron 35.0%
GATCCAGTAACATAAGAAGT+GGG + chr7_3:566840-566859 Msa1087780:intron 35.0%
TAACATAAGAAGTGGGAGAT+GGG + chr7_3:566847-566866 Msa1087780:intron 35.0%
ACCATAATCAAGCAAGTGAA+AGG + chr7_3:566924-566943 Msa1087780:intron 35.0%
TCCTTTCACTTGCTTGATTA+TGG - chr7_3:566928-566947 None:intergenic 35.0%
CGTACCAACCTAAAATTGAT+GGG - chr7_3:567022-567041 None:intergenic 35.0%
TCGTACCAACCTAAAATTGA+TGG - chr7_3:567023-567042 None:intergenic 35.0%
TTTATACCCTTCAGAAGCAA+GGG - chr7_3:567069-567088 None:intergenic 35.0%
! TTTTATACCCTTCAGAAGCA+AGG - chr7_3:567070-567089 None:intergenic 35.0%
GGTATAAAAGTTCGCTAAAG+AGG + chr7_3:567081-567100 Msa1087780:intron 35.0%
GGAATCCAACCTAATTAAGA+AGG + chr7_3:567125-567144 Msa1087780:intron 35.0%
ATCCAACCTAATTAAGAAGG+TGG + chr7_3:567128-567147 Msa1087780:intron 35.0%
TGAAGGATTTCGTGATAGTT+TGG + chr7_3:567196-567215 Msa1087780:intron 35.0%
TACTAAAACATTGCAGGTTG+TGG + chr7_3:567356-567375 Msa1087780:intron 35.0%
ACTAAAACATTGCAGGTTGT+GGG + chr7_3:567357-567376 Msa1087780:intron 35.0%
TGAGTAGACAACAAAAGATG+TGG - chr7_3:567406-567425 None:intergenic 35.0%
CTGATGCACATAATAGAACT+TGG + chr7_3:567436-567455 Msa1087780:three_prime_UTR 35.0%
AGTGACTGGCATAATTTCTT+TGG + chr7_3:567612-567631 Msa1087780:three_prime_UTR 35.0%
ATGCCAGGATCACAAAAATA+TGG + chr7_3:567661-567680 Msa1087780:intron 35.0%
TGAGCAGATTAAACTCAACA+GGG - chr7_3:567788-567807 None:intergenic 35.0%
ATGAGCAGATTAAACTCAAC+AGG - chr7_3:567789-567808 None:intergenic 35.0%
! CTCACCAAAATATCTTTTGG+CGG + chr7_3:567858-567877 Msa1087780:intron 35.0%
! TGTACCGCCAAAAGATATTT+TGG - chr7_3:567865-567884 None:intergenic 35.0%
! TTTCCAGATATCCTTTTAGG+AGG - chr7_3:567955-567974 None:intergenic 35.0%
ATGTGTATTCACCAAGTATC+AGG + chr7_3:568006-568025 Msa1087780:intron 35.0%
CTTAAACTGGTTGTGATGTT+TGG - chr7_3:568060-568079 None:intergenic 35.0%
! TTACAATTTTGCCCTCAAGT+GGG - chr7_3:568260-568279 None:intergenic 35.0%
GGAGAAAAGAGAGAATAACT+AGG - chr7_3:568463-568482 None:intergenic 35.0%
GACAGATGATGAAGAGAAAA+TGG - chr7_3:568544-568563 None:intergenic 35.0%
! CATTTTCTCTCATGGAATCA+TGG - chr7_3:568629-568648 None:intergenic 35.0%
GAGAAAATGAAAACAGAGCA+TGG + chr7_3:568640-568659 Msa1087780:intron 35.0%
GGTTTGAGTGAGAAAGAAAT+CGG + chr7_3:568726-568745 Msa1087780:intron 35.0%
! ACGTAAGTTTAAAACGTGCT+GGG - chr7_3:568846-568865 None:intergenic 35.0%
! AACGTAAGTTTAAAACGTGC+TGG - chr7_3:568847-568866 None:intergenic 35.0%
TAAACTTACGTTCCTGTATC+AGG + chr7_3:568855-568874 Msa1087780:intron 35.0%
!!! TTTTTTGCATCTTCACAGTC+AGG - chr7_3:568889-568908 None:intergenic 35.0%
! ATCTGATGGATATATAGCGA+AGG + chr7_3:569020-569039 Msa1087780:intron 35.0%
GAGGCAAAAACAAAAGGTTT+GGG - chr7_3:569152-569171 None:intergenic 35.0%
AGAGGCAAAAACAAAAGGTT+TGG - chr7_3:569153-569172 None:intergenic 35.0%
AACGAAGAGGCAAAAACAAA+AGG - chr7_3:569158-569177 None:intergenic 35.0%
! GAGATCATTCTTTTCACCAA+CGG + chr7_3:569328-569347 Msa1087780:intron 35.0%
GGAAATTAGACTGTCTTCAA+TGG - chr7_3:569357-569376 None:intergenic 35.0%
GATTGAAGAGCTCATAGAAT+TGG - chr7_3:569399-569418 None:intergenic 35.0%
TCTTGTGTAGATAAAAGAGC+CGG - chr7_3:569450-569469 None:intergenic 35.0%
! TAACACTGAATTTTCCTTGC+AGG - chr7_3:569532-569551 None:intergenic 35.0%
GTTAAAGAACTTGTCATCAC+TGG + chr7_3:569554-569573 Msa1087780:intron 35.0%
TTTGTTAGGTGAATTCCACA+CGG + chr7_3:569652-569671 Msa1087780:intron 35.0%
CACCTTAATCAACAAAAAGG+TGG + chr7_3:569884-569903 Msa1087780:three_prime_UTR 35.0%
! GGAGCATTTATTCTGTTAAG+TGG - chr7_3:569926-569945 None:intergenic 35.0%
TTTACATATGGGTGGGTATA+TGG + chr7_3:570065-570084 Msa1087780:three_prime_UTR 35.0%
! TATGGTGGAATAAGACAATG+TGG - chr7_3:570200-570219 None:intergenic 35.0%
ATAATAAGACCTCTCAGGTA+TGG - chr7_3:570218-570237 None:intergenic 35.0%
! CGATCTGTTGTTTGTTCAAG+AGG - chr7_3:561242-561261 None:intergenic 40.0%
TCTCCTCTTGAACAACAGAT+CGG + chr7_3:561266-561285 Msa1087780:five_prime_UTR 40.0%
TTACCGATCTGTTGTTCAAG+AGG - chr7_3:561272-561291 None:intergenic 40.0%
ACTCCTCTTGAACAACAGAT+CGG + chr7_3:561312-561331 Msa1087780:intron 40.0%
!! CTCTCCCCTCTATTTCTAAT+TGG + chr7_3:561985-562004 Msa1087780:intron 40.0%
CAGGAAAGTTTGGCCAAATT+TGG - chr7_3:562122-562141 None:intergenic 40.0%
! TTCCTGTACATCTCCGTTTT+TGG + chr7_3:562136-562155 Msa1087780:five_prime_UTR 40.0%
!!! TGTACATCTCCGTTTTTGGT+GGG + chr7_3:562140-562159 Msa1087780:five_prime_UTR 40.0%
AAAGCCAAACCCACCAAAAA+CGG - chr7_3:562152-562171 None:intergenic 40.0%
ATCTGTTGTGCTCTTCATGT+GGG + chr7_3:562180-562199 Msa1087780:five_prime_UTR 40.0%
GCTTTATCTGTGTCAAAGAC+TGG + chr7_3:562271-562290 Msa1087780:five_prime_UTR 40.0%
CTACTTGAAGAGTCAGAAGA+GGG - chr7_3:562443-562462 None:intergenic 40.0%
ACTACTTGAAGAGTCAGAAG+AGG - chr7_3:562444-562463 None:intergenic 40.0%
GAATACATGTTTCTCCCTTC+AGG + chr7_3:562512-562531 Msa1087780:intron 40.0%
TACCTACAACAGCGGAAAAT+GGG - chr7_3:562697-562716 None:intergenic 40.0%
! GGAAAATCGGCTTATATGGA+TGG - chr7_3:562833-562852 None:intergenic 40.0%
! GATTTTCCAGATGAAGACCA+AGG + chr7_3:562845-562864 Msa1087780:CDS 40.0%
TATACTCTCAGCAGAAATCC+CGG - chr7_3:563038-563057 None:intergenic 40.0%
AGAGTATATCAGGGATGGAA+AGG + chr7_3:563050-563069 Msa1087780:intron 40.0%
! TGTTTGAGTTAACCGATGAC+AGG + chr7_3:563088-563107 Msa1087780:intron 40.0%
!! TCCTGTTTGTTTGGTGTAGT+GGG + chr7_3:563193-563212 Msa1087780:intron 40.0%
TGTTGTCTTCAAATCGCGTA+AGG + chr7_3:563337-563356 Msa1087780:CDS 40.0%
AACTTCACAGCATCCTCAAT+GGG - chr7_3:563474-563493 None:intergenic 40.0%
AAACTTCACAGCATCCTCAA+TGG - chr7_3:563475-563494 None:intergenic 40.0%
GATGCTGTGAAGTTTAGAGA+TGG + chr7_3:563480-563499 Msa1087780:CDS 40.0%
!!! GTTTTAGTGTTGTGATGGGT+TGG + chr7_3:563583-563602 Msa1087780:intron 40.0%
GGGGTTCCAAAACAGATTAT+GGG - chr7_3:564241-564260 None:intergenic 40.0%
TGGGGTTCCAAAACAGATTA+TGG - chr7_3:564242-564261 None:intergenic 40.0%
TGAAAACGTTTACGTCGCAT+TGG + chr7_3:564501-564520 Msa1087780:intron 40.0%
CAATGGCAGCATTTCATGAA+GGG - chr7_3:564922-564941 None:intergenic 40.0%
CCAACATGATCAAAAGCCAA+TGG - chr7_3:564939-564958 None:intergenic 40.0%
!!! CCATTGGCTTTTGATCATGT+TGG + chr7_3:564936-564955 Msa1087780:intron 40.0%
AAGATGCAAGTAGCAACGAT+AGG - chr7_3:565080-565099 None:intergenic 40.0%
TCTGTATCAGGCCAAAATTC+TGG - chr7_3:565305-565324 None:intergenic 40.0%
TCAGGCACACCAAATCATTT+CGG - chr7_3:565419-565438 None:intergenic 40.0%
ATCATCCACTATGGATTCCT+TGG + chr7_3:565712-565731 Msa1087780:intron 40.0%
AAATGCCAAGGAATCCATAG+TGG - chr7_3:565720-565739 None:intergenic 40.0%
TGATCTTGAGGACAAAATCC+GGG - chr7_3:566454-566473 None:intergenic 40.0%
GCAAATAGGGTTGAAGTTTC+AGG + chr7_3:566667-566686 Msa1087780:intron 40.0%
GCAAGCAAATTCAAAGAGAC+AGG - chr7_3:566724-566743 None:intergenic 40.0%
! ATTTGCTTGCTGAACCATTC+TGG + chr7_3:566734-566753 Msa1087780:intron 40.0%
! TTTGCTTGCTGAACCATTCT+GGG + chr7_3:566735-566754 Msa1087780:intron 40.0%
TCTCCCACTTCTTATGTTAC+TGG - chr7_3:566846-566865 None:intergenic 40.0%
GTAACATAAGAAGTGGGAGA+TGG + chr7_3:566846-566865 Msa1087780:intron 40.0%
AACATAAGAAGTGGGAGATG+GGG + chr7_3:566848-566867 Msa1087780:intron 40.0%
ACTGCATTTGAAGACCTGTA+TGG - chr7_3:566882-566901 None:intergenic 40.0%
TGTCACTGACAAAACATTGC+AGG + chr7_3:566969-566988 Msa1087780:intron 40.0%
! TGAGTCTGCCCATCAATTTT+AGG + chr7_3:567011-567030 Msa1087780:intron 40.0%
!! TCTGCCCATCAATTTTAGGT+TGG + chr7_3:567015-567034 Msa1087780:intron 40.0%
TTCTATTCCCTTGCTTCTGA+AGG + chr7_3:567059-567078 Msa1087780:intron 40.0%
TCTATTCCCTTGCTTCTGAA+GGG + chr7_3:567060-567079 Msa1087780:intron 40.0%
AGCCACCTTCTTAATTAGGT+TGG - chr7_3:567133-567152 None:intergenic 40.0%
ATGGAGCCACCTTCTTAATT+AGG - chr7_3:567137-567156 None:intergenic 40.0%
TTTCGTGATAGTTTGGAGAG+AGG + chr7_3:567203-567222 Msa1087780:intron 40.0%
TTCGTGATAGTTTGGAGAGA+GGG + chr7_3:567204-567223 Msa1087780:intron 40.0%
GAGCAGATTAAACTCAACAG+GGG - chr7_3:567787-567806 None:intergenic 40.0%
GGCAAATGCAACGTGTAATT+TGG - chr7_3:567934-567953 None:intergenic 40.0%
TTGCCTCCTAAAAGGATATC+TGG + chr7_3:567949-567968 Msa1087780:intron 40.0%
TAAGATCGAGGAACGTAACA+CGG + chr7_3:568224-568243 Msa1087780:intron 40.0%
! GTTACAATTTTGCCCTCAAG+TGG - chr7_3:568261-568280 None:intergenic 40.0%
TGAAGAGAGGTAGATCTAGA+TGG - chr7_3:568503-568522 None:intergenic 40.0%
GAAGAAGAAGGATTGAAGAG+AGG - chr7_3:568516-568535 None:intergenic 40.0%
CTTCGAAGAAGAGAATGAGA+AGG - chr7_3:568596-568615 None:intergenic 40.0%
GTCGGGTCAAAATTATAACC+CGG - chr7_3:568790-568809 None:intergenic 40.0%
!! GTTATAATTTTGACCCGACC+CGG + chr7_3:568791-568810 Msa1087780:intron 40.0%
AAGATGCAAAAAACGAACCC+AGG + chr7_3:568896-568915 Msa1087780:intron 40.0%
CAGTTATGATCAAGGTAGAC+AGG - chr7_3:568990-569009 None:intergenic 40.0%
AGTACGTAGTCTCGCTAAAA+TGG + chr7_3:569068-569087 Msa1087780:intron 40.0%
GTAATGCTTCGACACAAGAT+TGG - chr7_3:569125-569144 None:intergenic 40.0%
TAGCTGCAACAGAGTAGATA+AGG + chr7_3:569184-569203 Msa1087780:intron 40.0%
AAGAGCTCATAGAATTGGCA+AGG - chr7_3:569394-569413 None:intergenic 40.0%
TTTCATTGAGGCAGTGTATG+TGG + chr7_3:569610-569629 Msa1087780:intron 40.0%
TTCATTGAGGCAGTGTATGT+GGG + chr7_3:569611-569630 Msa1087780:intron 40.0%
!! GCCCACCTTTTTGTTGATTA+AGG - chr7_3:569889-569908 None:intergenic 40.0%
ACTCACGAGAACACATGCTT+TGG + chr7_3:561159-561178 Msa1087780:five_prime_UTR 45.0%
TGAGTTGCCAGATCTAGTCT+AGG - chr7_3:561200-561219 None:intergenic 45.0%
CTACCGATCTGTTGTTCAAG+AGG - chr7_3:561318-561337 None:intergenic 45.0%
CGGAGATGTACAGGAAAGTT+TGG - chr7_3:562132-562151 None:intergenic 45.0%
CACCAAAAACGGAGATGTAC+AGG - chr7_3:562141-562160 None:intergenic 45.0%
!! CTGTACATCTCCGTTTTTGG+TGG + chr7_3:562139-562158 Msa1087780:five_prime_UTR 45.0%
!!! ATCTCCGTTTTTGGTGGGTT+TGG + chr7_3:562145-562164 Msa1087780:five_prime_UTR 45.0%
GATCTGTTGTGCTCTTCATG+TGG + chr7_3:562179-562198 Msa1087780:five_prime_UTR 45.0%
TTGTGCTCTTCATGTGGGAT+TGG + chr7_3:562185-562204 Msa1087780:five_prime_UTR 45.0%
TGTGCTCTTCATGTGGGATT+GGG + chr7_3:562186-562205 Msa1087780:five_prime_UTR 45.0%
CAAAAAAAACCTCGTCGGTG+CGG - chr7_3:562230-562249 None:intergenic 45.0%
ATCGGTACTTTCTGTGCCTT+TGG + chr7_3:562318-562337 Msa1087780:five_prime_UTR 45.0%
TGTAGGAAGATCTCCTCCAA+AGG - chr7_3:562337-562356 None:intergenic 45.0%
GTACCTACAACAGCGGAAAA+TGG - chr7_3:562698-562717 None:intergenic 45.0%
GATCTTGGTACCTACAACAG+CGG - chr7_3:562705-562724 None:intergenic 45.0%
TTCTGTTGTGGCATGGATCT+TGG - chr7_3:562720-562739 None:intergenic 45.0%
! AGGTGTTTTCTGTTGTGGCA+TGG - chr7_3:562727-562746 None:intergenic 45.0%
! ACAGCAGGTGTTTTCTGTTG+TGG - chr7_3:562732-562751 None:intergenic 45.0%
GGTCTACAAGATGAAGACCA+AGG + chr7_3:562783-562802 Msa1087780:CDS 45.0%
! TATGCACCTTGGTCTTCATC+TGG - chr7_3:562854-562873 None:intergenic 45.0%
!! GATGTCATTGGCTTGATGAC+CGG + chr7_3:563016-563035 Msa1087780:intron 45.0%
!! ATGTCATTGGCTTGATGACC+GGG + chr7_3:563017-563036 Msa1087780:intron 45.0%
! TGCTGAGAGTATATCAGGGA+TGG + chr7_3:563045-563064 Msa1087780:intron 45.0%
GTTGACGTGTCCTGTTTGTT+TGG + chr7_3:563184-563203 Msa1087780:intron 45.0%
!! GTCCTGTTTGTTTGGTGTAG+TGG + chr7_3:563192-563211 Msa1087780:intron 45.0%
TCCCACTACACCAAACAAAC+AGG - chr7_3:563197-563216 None:intergenic 45.0%
TTGATGGGGAAGTCTACTGA+TGG + chr7_3:563264-563283 Msa1087780:CDS 45.0%
! AACGGGCCCATAATCTGTTT+TGG + chr7_3:564232-564251 Msa1087780:intron 45.0%
ACAAAGAGCAATGAGTGGAC+AGG + chr7_3:564375-564394 Msa1087780:intron 45.0%
TCAGAAGAGAGGTCATGCAA+TGG + chr7_3:564811-564830 Msa1087780:intron 45.0%
CCAATGGCAGCATTTCATGA+AGG - chr7_3:564923-564942 None:intergenic 45.0%
CCTTCATGAAATGCTGCCAT+TGG + chr7_3:564920-564939 Msa1087780:intron 45.0%
GATTGGATTTGTCTCAGGTG+TGG + chr7_3:565323-565342 Msa1087780:intron 45.0%
GATTGTGATAGATGTTGGCC+CGG + chr7_3:566433-566452 Msa1087780:intron 45.0%
GACAGAACGCGTTGAATATC+TGG + chr7_3:566482-566501 Msa1087780:intron 45.0%
! AATATCTGGTCTTCCCAAGC+AGG + chr7_3:566496-566515 Msa1087780:intron 45.0%
! TTTGCGAGCTTTTGCGATGA+TGG + chr7_3:566631-566650 Msa1087780:intron 45.0%
TGGACGGGTACTTGCAAATA+GGG + chr7_3:566654-566673 Msa1087780:intron 45.0%
AAATCAGTCTCGAACGAGCA+TGG - chr7_3:566761-566780 None:intergenic 45.0%
CTGATTTAACAGCCGAAGTG+CGG + chr7_3:566774-566793 Msa1087780:intron 45.0%
ACATAAGAAGTGGGAGATGG+GGG + chr7_3:566849-566868 Msa1087780:intron 45.0%
TCCAGCAATGCTTCTGTCTT+GGG + chr7_3:567104-567123 Msa1087780:intron 45.0%
TCACAGCACGTCTCAAATTC+CGG - chr7_3:567179-567198 None:intergenic 45.0%
! GAATTTGAGACGTGCTGTGA+AGG + chr7_3:567179-567198 Msa1087780:intron 45.0%
TCGTGATAGTTTGGAGAGAG+GGG + chr7_3:567205-567224 Msa1087780:intron 45.0%
CAAAATTGCATACCCAGCAC+AGG - chr7_3:567248-567267 None:intergenic 45.0%
! CTGTGCTGGGTATGCAATTT+TGG + chr7_3:567246-567265 Msa1087780:intron 45.0%
! TTTTGGCGGTACACAGATAC+TGG + chr7_3:567872-567891 Msa1087780:intron 45.0%
CGTTGCATTTGCCTCCTAAA+AGG + chr7_3:567941-567960 Msa1087780:intron 45.0%
GAACTCGTTCCTGACTACAT+TGG - chr7_3:568172-568191 None:intergenic 45.0%
AACGAGTTCCTACGTAGGAT+CGG + chr7_3:568183-568202 Msa1087780:intron 45.0%
GTTCGTAAGAACCCACTTGA+GGG + chr7_3:568246-568265 Msa1087780:intron 45.0%
TAGATCTAGATGGTAGCAGG+CGG - chr7_3:568493-568512 None:intergenic 45.0%
AGGTAGATCTAGATGGTAGC+AGG - chr7_3:568496-568515 None:intergenic 45.0%
AATTCGCCGGAAAAGAGAAC+TGG + chr7_3:568686-568705 Msa1087780:intron 45.0%
TCAAACCCTAAACGCGAAAG+GGG - chr7_3:568713-568732 None:intergenic 45.0%
CTCAAACCCTAAACGCGAAA+GGG - chr7_3:568714-568733 None:intergenic 45.0%
ACTCAAACCCTAAACGCGAA+AGG - chr7_3:568715-568734 None:intergenic 45.0%
! TGATTTGGGCTTAACGAACC+GGG - chr7_3:568812-568831 None:intergenic 45.0%
! GTGATTTGGGCTTAACGAAC+CGG - chr7_3:568813-568832 None:intergenic 45.0%
GGGCTTGGCTTAAGTGATTT+GGG - chr7_3:568826-568845 None:intergenic 45.0%
TGGGCTTGGCTTAAGTGATT+TGG - chr7_3:568827-568846 None:intergenic 45.0%
! AGTTTAAAACGTGCTGGGCT+TGG - chr7_3:568841-568860 None:intergenic 45.0%
! AACGAGGCACGTTTTTGTGT+GGG + chr7_3:568923-568942 Msa1087780:intron 45.0%
!! TTTTTGTGTGGGAAGCACGT+AGG + chr7_3:568934-568953 Msa1087780:intron 45.0%
AGCGAAGGAAAGTTCAGTAG+TGG + chr7_3:569035-569054 Msa1087780:intron 45.0%
!! AGGAAAGTTCAGTAGTGGAC+AGG + chr7_3:569040-569059 Msa1087780:intron 45.0%
CTGTCTTCAATGGAATCCGT+TGG - chr7_3:569347-569366 None:intergenic 45.0%
GGCAAGGTTAAAAGTTAGGG+AGG - chr7_3:569378-569397 None:intergenic 45.0%
TTCCCATATGTTACCAGCTC+CGG + chr7_3:569428-569447 Msa1087780:intron 45.0%
! TGTGGGCTATCTTATCCACA+CGG + chr7_3:569628-569647 Msa1087780:intron 45.0%
! CTTATCCACACGGGTTTGTT+AGG + chr7_3:569638-569657 Msa1087780:intron 45.0%
ATTCACCTAACAAACCCGTG+TGG - chr7_3:569646-569665 None:intergenic 45.0%
TTAGGTGAATTCCACACGGT+AGG + chr7_3:569656-569675 Msa1087780:intron 45.0%
TATCTCAAGAACCTACCGTG+TGG - chr7_3:569670-569689 None:intergenic 45.0%
TACACTCCAGCATTCAGTCA+GGG + chr7_3:570015-570034 Msa1087780:three_prime_UTR 45.0%
CTTATTCCACCATACCTGAG+AGG + chr7_3:570206-570225 Msa1087780:three_prime_UTR 45.0%
ATAAGACCTCTCAGGTATGG+TGG - chr7_3:570215-570234 None:intergenic 45.0%
!!! TTTTTTAATGTATAATTATT+TGG + chr7_3:562968-562987 Msa1087780:intron 5.0%
!!! TTTTTATTTTATGAATTTTA+AGG + chr7_3:564436-564455 Msa1087780:intron 5.0%
!! TATAAAACAATATATAAATT+AGG - chr7_3:565258-565277 None:intergenic 5.0%
!! TATATATATATATTACTATT+CGG + chr7_3:567982-568001 Msa1087780:intron 5.0%
AGATCTGGCAACTCAACTCG+CGG + chr7_3:561205-561224 Msa1087780:five_prime_UTR 50.0%
GGTACTTTCTGTGCCTTTGG+AGG + chr7_3:562321-562340 Msa1087780:five_prime_UTR 50.0%
!! GTACTGGCTGTGTTTGTGTC+AGG + chr7_3:562388-562407 Msa1087780:intron 50.0%
TCAACCCTAGCAGGAACACT+CGG - chr7_3:562473-562492 None:intergenic 50.0%
! GTTTCTCCCTTCAGGTTCTC+AGG + chr7_3:562520-562539 Msa1087780:five_prime_UTR 50.0%
CCAAAGCCTGAGAACCTGAA+GGG - chr7_3:562529-562548 None:intergenic 50.0%
! CCTTCAGGTTCTCAGGCTTT+GGG + chr7_3:562527-562546 Msa1087780:five_prime_UTR 50.0%
! GACCCATTTTCCGCTGTTGT+AGG + chr7_3:562692-562711 Msa1087780:intron 50.0%
CAAGATGAAGACCAAGGTGC+TGG + chr7_3:562789-562808 Msa1087780:CDS 50.0%
TTCACAGCATCCTCAATGGG+AGG - chr7_3:563471-563490 None:intergenic 50.0%
CTGCTGCTCTTGCAGATTCT+AGG + chr7_3:564316-564335 Msa1087780:intron 50.0%
TGCTCTTGCAGATTCTAGGC+TGG + chr7_3:564320-564339 Msa1087780:intron 50.0%
CGTTTACGTCGCATTGGAAG+TGG + chr7_3:564507-564526 Msa1087780:intron 50.0%
GGTCTTCCCAAGCAGGATTT+CGG + chr7_3:566503-566522 Msa1087780:intron 50.0%
TCCTTGCCGAAATCCTGCTT+GGG - chr7_3:566512-566531 None:intergenic 50.0%
TTCCTTGCCGAAATCCTGCT+TGG - chr7_3:566513-566532 None:intergenic 50.0%
!!! GCTTTTGCGATGATGGTGGA+CGG + chr7_3:566638-566657 Msa1087780:intron 50.0%
!!! CTTTTGCGATGATGGTGGAC+GGG + chr7_3:566639-566658 Msa1087780:intron 50.0%
GTGGACGGGTACTTGCAAAT+AGG + chr7_3:566653-566672 Msa1087780:intron 50.0%
!! CTAAACGAAGCACCGCACTT+CGG - chr7_3:566789-566808 None:intergenic 50.0%
ATGCAGTGCAGAGTGATACG+AGG + chr7_3:566895-566914 Msa1087780:intron 50.0%
! AGGAAGCATGTCCACTGTTG+TGG + chr7_3:566944-566963 Msa1087780:intron 50.0%
! GGAAGCATGTCCACTGTTGT+GGG + chr7_3:566945-566964 Msa1087780:intron 50.0%
TCAGTGACAACCCACAACAG+TGG - chr7_3:566958-566977 None:intergenic 50.0%
GTCCAGCAATGCTTCTGTCT+TGG + chr7_3:567103-567122 Msa1087780:intron 50.0%
!! TCCCAAGACAGAAGCATTGC+TGG - chr7_3:567108-567127 None:intergenic 50.0%
CACAGCACGTCTCAAATTCC+GGG - chr7_3:567178-567197 None:intergenic 50.0%
TCAGGAACGAGTTCCTACGT+AGG + chr7_3:568178-568197 Msa1087780:intron 50.0%
AGTTCCTACGTAGGATCGGT+GGG + chr7_3:568187-568206 Msa1087780:intron 50.0%
GGTTCGTAAGAACCCACTTG+AGG + chr7_3:568245-568264 Msa1087780:intron 50.0%
CATGGGTAGAGAGAGAACGA+CGG + chr7_3:568658-568677 Msa1087780:intron 50.0%
CAAACCCTAAACGCGAAAGG+GGG - chr7_3:568712-568731 None:intergenic 50.0%
CAGGAACGAGTTCCTGATAC+AGG - chr7_3:568870-568889 None:intergenic 50.0%
AACGAACCCAGGTAAGAACG+AGG + chr7_3:568907-568926 Msa1087780:intron 50.0%
AACGTGCCTCGTTCTTACCT+GGG - chr7_3:568916-568935 None:intergenic 50.0%
AAACGTGCCTCGTTCTTACC+TGG - chr7_3:568917-568936 None:intergenic 50.0%
! GAACGAGGCACGTTTTTGTG+TGG + chr7_3:568922-568941 Msa1087780:intron 50.0%
GCAGCTACATGTCAACGAAG+AGG - chr7_3:569171-569190 None:intergenic 50.0%
AGCCGGAGCTGGTAACATAT+GGG - chr7_3:569433-569452 None:intergenic 50.0%
GTAGATAAAAGAGCCGGAGC+TGG - chr7_3:569444-569463 None:intergenic 50.0%
! GTGGGCTATCTTATCCACAC+GGG + chr7_3:569629-569648 Msa1087780:intron 50.0%
GGTATGACATCGGAACTCTG+TGG - chr7_3:569962-569981 None:intergenic 50.0%
CTACACTCCAGCATTCAGTC+AGG + chr7_3:570014-570033 Msa1087780:three_prime_UTR 50.0%
TAGCTACCCTGACTGAATGC+TGG - chr7_3:570024-570043 None:intergenic 50.0%
! TGGTACCGAGTGTTCCTGCT+AGG + chr7_3:562465-562484 Msa1087780:intron 55.0%
! GGTACCGAGTGTTCCTGCTA+GGG + chr7_3:562466-562485 Msa1087780:intron 55.0%
! CCCTTCAGGTTCTCAGGCTT+TGG + chr7_3:562526-562545 Msa1087780:five_prime_UTR 55.0%
CCCAAAGCCTGAGAACCTGA+AGG - chr7_3:562530-562549 None:intergenic 55.0%
TACGGTATGCACCAGCACCT+TGG - chr7_3:562803-562822 None:intergenic 55.0%
TCCCAAGCAGGATTTCGGCA+AGG + chr7_3:566508-566527 Msa1087780:intron 55.0%
! AGATGGATTTGGGAGGACGC+CGG + chr7_3:566545-566564 Msa1087780:intron 55.0%
!! GCGAGCTTTTGCGATGATGG+TGG + chr7_3:566634-566653 Msa1087780:intron 55.0%
! TAGCTCCAAAGCACCTGTGC+TGG + chr7_3:567232-567251 Msa1087780:intron 55.0%
! AGCTCCAAAGCACCTGTGCT+GGG + chr7_3:567233-567252 Msa1087780:intron 55.0%
CATACCCAGCACAGGTGCTT+TGG - chr7_3:567240-567259 None:intergenic 55.0%
GAGTTCCTACGTAGGATCGG+TGG + chr7_3:568186-568205 Msa1087780:intron 55.0%
GGTGAAGGGACGTAAGATCG+AGG + chr7_3:568212-568231 Msa1087780:intron 55.0%
AACGACGGCGAGAAATTCGC+CGG + chr7_3:568673-568692 Msa1087780:intron 55.0%
! AGGGGGCCAGTTCTCTTTTC+CGG - chr7_3:568695-568714 None:intergenic 55.0%
TTGGGCTTAACGAACCGGGT+CGG - chr7_3:568808-568827 None:intergenic 55.0%
GAGCCGGAGCTGGTAACATA+TGG - chr7_3:569434-569453 None:intergenic 55.0%
CTCTGTGGATAAGTGACGCG+AGG - chr7_3:569947-569966 None:intergenic 55.0%
CGAACGAGCATGGCCCAGAA+TGG - chr7_3:566751-566770 None:intergenic 60.0%
!! TAGGATCGGTGGGCTGGTGA+AGG + chr7_3:568197-568216 Msa1087780:intron 60.0%
!! AGGATCGGTGGGCTGGTGAA+GGG + chr7_3:568198-568217 Msa1087780:intron 60.0%
ATGGTAGCAGGCGGCAGCTA+AGG - chr7_3:568484-568503 None:intergenic 60.0%
ACTGGCCCCCTTTCGCGTTT+AGG + chr7_3:568704-568723 Msa1087780:intron 60.0%
CTGGCCCCCTTTCGCGTTTA+GGG + chr7_3:568705-568724 Msa1087780:intron 60.0%
TGGGCTTAACGAACCGGGTC+GGG - chr7_3:568807-568826 None:intergenic 60.0%
! GTGTGGGAAGCACGTAGGAG+CGG + chr7_3:568939-568958 Msa1087780:intron 60.0%
AGCGGACGATCCTACGTGCT+GGG + chr7_3:568957-568976 Msa1087780:intron 60.0%
AGGAACGAGTCCCAGCACGT+AGG - chr7_3:568970-568989 None:intergenic 60.0%
AAGTGGGAGATGGGGGAGCG+TGG + chr7_3:566856-566875 Msa1087780:intron 65.0%
! ATGGGGGAGCGTGGCCATAC+AGG + chr7_3:566865-566884 Msa1087780:intron 65.0%
CCAGCCCACCGATCCTACGT+AGG - chr7_3:568194-568213 None:intergenic 65.0%
CCTACGTAGGATCGGTGGGC+TGG + chr7_3:568191-568210 Msa1087780:intron 65.0%
GAGCGGACGATCCTACGTGC+TGG + chr7_3:568956-568975 Msa1087780:intron 65.0%
!! CTGCGTGCGCCGCACCGACG+AGG + chr7_3:562218-562237 Msa1087780:five_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 561145 570254 561145 ID=Msa1087780;Name=Msa1087780
chr7_3 mRNA 561145 570254 561145 ID=Msa1087780-mRNA-1;Parent=Msa1087780;Name=Msa1087780-mRNA-1;_AED=0.30;_eAED=0.34;_QI=562|0.42|0.62|0.87|0.57|0.37|8|742|121
chr7_3 exon 561145 561287 561145 ID=Msa1087780-mRNA-1:exon:247;Parent=Msa1087780-mRNA-1
chr7_3 exon 562058 562387 562058 ID=Msa1087780-mRNA-1:exon:248;Parent=Msa1087780-mRNA-1
chr7_3 exon 562513 562609 562513 ID=Msa1087780-mRNA-1:exon:249;Parent=Msa1087780-mRNA-1
chr7_3 exon 562779 562866 562779 ID=Msa1087780-mRNA-1:exon:250;Parent=Msa1087780-mRNA-1
chr7_3 exon 563261 563358 563261 ID=Msa1087780-mRNA-1:exon:251;Parent=Msa1087780-mRNA-1
chr7_3 exon 563395 563502 563395 ID=Msa1087780-mRNA-1:exon:252;Parent=Msa1087780-mRNA-1
chr7_3 exon 567372 567633 567372 ID=Msa1087780-mRNA-1:exon:253;Parent=Msa1087780-mRNA-1
chr7_3 exon 569711 570254 569711 ID=Msa1087780-mRNA-1:exon:254;Parent=Msa1087780-mRNA-1
chr7_3 five_prime_UTR 561145 561287 561145 ID=Msa1087780-mRNA-1:five_prime_utr;Parent=Msa1087780-mRNA-1
chr7_3 five_prime_UTR 562058 562387 562058 ID=Msa1087780-mRNA-1:five_prime_utr;Parent=Msa1087780-mRNA-1
chr7_3 five_prime_UTR 562513 562601 562513 ID=Msa1087780-mRNA-1:five_prime_utr;Parent=Msa1087780-mRNA-1
chr7_3 CDS 562602 562609 562602 ID=Msa1087780-mRNA-1:cds;Parent=Msa1087780-mRNA-1
chr7_3 CDS 562779 562866 562779 ID=Msa1087780-mRNA-1:cds;Parent=Msa1087780-mRNA-1
chr7_3 CDS 563261 563358 563261 ID=Msa1087780-mRNA-1:cds;Parent=Msa1087780-mRNA-1
chr7_3 CDS 563395 563502 563395 ID=Msa1087780-mRNA-1:cds;Parent=Msa1087780-mRNA-1
chr7_3 CDS 567372 567435 567372 ID=Msa1087780-mRNA-1:cds;Parent=Msa1087780-mRNA-1
chr7_3 three_prime_UTR 567436 567633 567436 ID=Msa1087780-mRNA-1:three_prime_utr;Parent=Msa1087780-mRNA-1
chr7_3 three_prime_UTR 569711 570254 569711 ID=Msa1087780-mRNA-1:three_prime_utr;Parent=Msa1087780-mRNA-1
Gene Sequence

>Msa1087780

ATGATGAGGAGAGGTCTACAAGATGAAGACCAAGGTGCTGGTGCATACCGTACTATGCTCCATCCATATAAGCCGATTTTCCAGATGAAGACCAAGAAATTGATGGGGAAGTCTACTGATGGAATGCCTGATGTTGTTTTTCAATTTGCCAAAATTAAGATATTTCAAGGTTTGTTGTCTTCAAATCGCGTAAGGTTAGATTTTGAATACTTTGCATATAAGGCATATCTTCAGAATGTAATGAATACAACTAAGATATTTGTTAATCCTCCCATTGAGGATGCTGTGAAGTTTAGAGATGGGTTGTGGGATCATATTTTGAGAAAATTGGGTCCACATCTTTTGTTGTCTACTCAATTGCAGTGA
Protein sequence

>Msa1087780

MMRRGLQDEDQGAGAYRTMLHPYKPIFQMKTKKLMGKSTDGMPDVVFQFAKIKIFQGLLSSNRVRLDFEYFAYKAYLQNVMNTTKIFVNPPIEDAVKFRDGLWDHILRKLGPHLLLSTQLQ*