Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221600 | KEH32598.1 | 70.520 | 346 | 99 | 2 | 5 | 349 | 13 | 356 | 1.14e-170 | 501 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221600 | sp|Q8RXF8|MIRO1_ARATH | 58.036 | 336 | 139 | 1 | 13 | 346 | 19 | 354 | 2.11e-128 | 386 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221600 | G7JEA4 | 73.901 | 364 | 51 | 3 | 20 | 350 | 29 | 381 | 0.0 | 530 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1221600 | Msa1221990 | 0.923542 | 2.314748e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221600 | MtrunA17_Chr4g0073061 | 73.901 | 364 | 51 | 3 | 20 | 350 | 29 | 381 | 0.0 | 530 |
| Msa1221600 | MtrunA17_Chr4g0073381 | 69.799 | 298 | 87 | 2 | 53 | 349 | 1 | 296 | 4.17e-148 | 431 |
| Msa1221600 | MtrunA17_Chr1g0191811 | 57.955 | 352 | 145 | 2 | 8 | 358 | 13 | 362 | 6.37e-133 | 394 |
| Msa1221600 | MtrunA17_Chr5g0413741 | 54.464 | 336 | 134 | 2 | 13 | 347 | 63 | 380 | 1.71e-115 | 350 |
| Msa1221600 | MtrunA17_Chr5g0417151 | 53.821 | 301 | 128 | 2 | 73 | 362 | 40 | 340 | 5.95e-98 | 305 |
| Msa1221600 | MtrunA17_Chr7g0259771 | 46.724 | 351 | 180 | 2 | 10 | 359 | 7 | 351 | 6.48e-91 | 286 |
| Msa1221600 | MtrunA17_Chr1g0185591 | 40.341 | 352 | 203 | 2 | 9 | 359 | 10 | 355 | 1.34e-82 | 264 |
| Msa1221600 | MtrunA17_Chr5g0413461 | 60.800 | 125 | 49 | 0 | 222 | 346 | 4 | 128 | 3.38e-37 | 139 |
| Msa1221600 | MtrunA17_Chr8g0338031 | 33.000 | 300 | 161 | 8 | 11 | 290 | 33 | 312 | 9.31e-37 | 139 |
| Msa1221600 | MtrunA17_Chr5g0413781 | 73.810 | 42 | 11 | 0 | 305 | 346 | 12 | 53 | 2.28e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221600 | AT5G27540.1 | 58.036 | 336 | 139 | 1 | 13 | 346 | 19 | 354 | 2.14e-129 | 386 |
| Msa1221600 | AT5G27540.2 | 58.036 | 336 | 139 | 1 | 13 | 346 | 19 | 354 | 2.14e-129 | 386 |
| Msa1221600 | AT3G63150.1 | 46.821 | 346 | 183 | 1 | 2 | 346 | 5 | 350 | 1.39e-99 | 309 |
| Msa1221600 | AT3G05310.1 | 45.115 | 348 | 188 | 2 | 4 | 348 | 7 | 354 | 8.04e-92 | 289 |
| Msa1221600 | AT3G05310.3 | 43.062 | 209 | 116 | 2 | 143 | 348 | 1 | 209 | 3.67e-47 | 168 |
| Msa1221600 | AT3G05310.2 | 43.062 | 209 | 116 | 2 | 143 | 348 | 1 | 209 | 4.61e-47 | 167 |
Find 86 sgRNAs with CRISPR-Local
Find 547 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACTTTCATTCACACCTTC+TGG | 0.173968 | 8_1:+85261897 | None:intergenic |
| CTCCCACGTCTTCGAGATTT+GGG | 0.186448 | 8_1:-85262898 | Msa1221600:CDS |
| TTGAAAGTCTGAGTGCATTT+TGG | 0.229244 | 8_1:-85262921 | Msa1221600:CDS |
| CATTTAGTTCAGCAGCATTA+AGG | 0.258490 | 8_1:+85262155 | None:intergenic |
| CAGAAAGCAACCCACCTTTC+CGG | 0.265305 | 8_1:+85261337 | None:intergenic |
| GCTCCCACGTCTTCGAGATT+TGG | 0.267747 | 8_1:-85262899 | Msa1221600:CDS |
| CCAGAGGTTGAAATCAATAT+TGG | 0.274916 | 8_1:-85262444 | Msa1221600:CDS |
| AAACAATTCTTCAAGTTCTT+CGG | 0.305482 | 8_1:+85261369 | None:intergenic |
| AACAATTCTTCAAGTTCTTC+GGG | 0.306913 | 8_1:+85261370 | None:intergenic |
| AGAAAGCAACCCACCTTTCC+GGG | 0.321697 | 8_1:+85261338 | None:intergenic |
| CTTGCAAGCAGCAACTATAA+TGG | 0.324587 | 8_1:+85262536 | None:intergenic |
| TGGACTATGCTCAGAAAGTT+TGG | 0.345690 | 8_1:-85261807 | Msa1221600:CDS |
| GATTCCTCACGTGCCCTAAC+TGG | 0.348879 | 8_1:-85263514 | Msa1221600:CDS |
| AAGTCTGTTATTTCCCCTTC+GGG | 0.353776 | 8_1:-85262274 | Msa1221600:CDS |
| GTTCAGCATATACGCCTATA+GGG | 0.354233 | 8_1:-85262419 | Msa1221600:CDS |
| ACTTGCTGATCATCTAATTC+CGG | 0.372917 | 8_1:-85261766 | Msa1221600:CDS |
| TGTTCAGCATATACGCCTAT+AGG | 0.378264 | 8_1:-85262420 | Msa1221600:CDS |
| ATTTAGTTCAGCAGCATTAA+GGG | 0.382411 | 8_1:+85262156 | None:intergenic |
| CACTTTCATTCACACCTTCT+GGG | 0.382982 | 8_1:+85261898 | None:intergenic |
| AGCAATTAGACTGGACTTGC+CGG | 0.391959 | 8_1:+85263459 | None:intergenic |
| AAAGTCTGTTATTTCCCCTT+CGG | 0.397073 | 8_1:-85262275 | Msa1221600:CDS |
| CGACAATACGAAATCCAGTT+AGG | 0.402432 | 8_1:+85263500 | None:intergenic |
| CCATCGGGAGACAGATGTTT+AGG | 0.411126 | 8_1:+85263376 | None:intergenic |
| CCAATATTGATTTCAACCTC+TGG | 0.417641 | 8_1:+85262444 | None:intergenic |
| TTGCAAGCAGCAACTATAAT+GGG | 0.418917 | 8_1:+85262537 | None:intergenic |
| CAATCATCGACACCTCTTCC+CGG | 0.431668 | 8_1:-85263342 | Msa1221600:intron |
| AATAGAAGATGCACCTGATC+AGG | 0.433238 | 8_1:+85261729 | None:intergenic |
| CTCTAACACCTCGATTTGTC+CGG | 0.433875 | 8_1:-85262225 | Msa1221600:CDS |
| AGATTCGCAATTCTAGATAG+TGG | 0.442408 | 8_1:+85261945 | None:intergenic |
| GGAGCGGCAGCTGCGGTAGT+TGG | 0.443126 | 8_1:-85255789 | Msa1221600:CDS |
| TCAGGATCACGTTTCAAATC+CGG | 0.451014 | 8_1:+85261747 | None:intergenic |
| AGCAACTTTATCTCTGTCCT+CGG | 0.454406 | 8_1:+85263005 | None:intergenic |
| CAGAGGATATGTACCCCTAT+AGG | 0.459633 | 8_1:+85262405 | None:intergenic |
| AAATCGAGGTGTTAGAGTCT+TGG | 0.477910 | 8_1:+85262231 | None:intergenic |
| TGCAGCTGGAGCGGCAGCTG+CGG | 0.483005 | 8_1:-85255796 | Msa1221600:intron |
| CTAGAATTGCGAATCTAATG+AGG | 0.489491 | 8_1:-85261938 | Msa1221600:CDS |
| ATAAAGTTGCTGAACAAATA+CGG | 0.494680 | 8_1:-85262993 | Msa1221600:CDS |
| ACAGGCGGCACGTCCTTCAC+AGG | 0.495012 | 8_1:+85263418 | None:intergenic |
| TTTGAAACGTGATCCTGATC+AGG | 0.496812 | 8_1:-85261742 | Msa1221600:intron |
| TTGGAATTTCGACAATATAA+CGG | 0.502635 | 8_1:+85262250 | None:intergenic |
| GTCACCGGCGACGAAGGAAC+CGG | 0.507330 | 8_1:-85263478 | Msa1221600:CDS |
| CAATATTGATTTCAACCTCT+GGG | 0.510726 | 8_1:+85262445 | None:intergenic |
| CCAGAAGGTGTGAATGAAAG+TGG | 0.512498 | 8_1:-85261897 | Msa1221600:CDS |
| CTTGCCGGTTCCTTCGTCGC+CGG | 0.516545 | 8_1:+85263474 | None:intergenic |
| ATTGTGATCGGTATGCCATC+GGG | 0.530462 | 8_1:+85263361 | None:intergenic |
| GCAACTTTATCTCTGTCCTC+GGG | 0.531408 | 8_1:+85263006 | None:intergenic |
| TGATAAACATTACCGGGAAG+AGG | 0.534334 | 8_1:+85263330 | None:intergenic |
| ATCCTAGTGGGTAACAGTAC+AGG | 0.545996 | 8_1:+85263400 | None:intergenic |
| TCCCACGTCTTCGAGATTTG+GGG | 0.548379 | 8_1:-85262897 | Msa1221600:CDS |
| CGCCTGTACTGTTACCCACT+AGG | 0.548473 | 8_1:-85263402 | Msa1221600:CDS |
| GACAATACGAAATCCAGTTA+GGG | 0.551548 | 8_1:+85263501 | None:intergenic |
| ACAATATAACGGACCCGAAG+GGG | 0.556593 | 8_1:+85262261 | None:intergenic |
| GGCGAAAGTAGCAATTAGAC+TGG | 0.557341 | 8_1:+85263450 | None:intergenic |
| TCTAACACCTCGATTTGTCC+GGG | 0.559553 | 8_1:-85262224 | Msa1221600:CDS |
| TCCTCACTTATGCATGCGAT+CGG | 0.562970 | 8_1:-85262954 | Msa1221600:CDS |
| GATTGTGATCGGTATGCCAT+CGG | 0.565745 | 8_1:+85263360 | None:intergenic |
| GACAATATAACGGACCCGAA+GGG | 0.569205 | 8_1:+85262260 | None:intergenic |
| TTCTGTTTCGTGAGATACCG+TGG | 0.574301 | 8_1:-85261827 | Msa1221600:CDS |
| CTAATTGCTACTTTCGCCGA+CGG | 0.576337 | 8_1:-85263445 | Msa1221600:CDS |
| GGATTTCGTATTGTCGTCAC+CGG | 0.578315 | 8_1:-85263493 | Msa1221600:CDS |
| CCCACGTCTTCGAGATTTGG+GGG | 0.582745 | 8_1:-85262896 | Msa1221600:intron |
| AGTTGCTGAACAAATACGGC+GGG | 0.583032 | 8_1:-85262989 | Msa1221600:CDS |
| CGACAATATAACGGACCCGA+AGG | 0.602189 | 8_1:+85262259 | None:intergenic |
| GTCCTTCACAGGGTTTCCGT+CGG | 0.608633 | 8_1:+85263429 | None:intergenic |
| TGTTTATATTGCAGCTGGAG+CGG | 0.608984 | 8_1:-85255805 | Msa1221600:intron |
| GCAATTCTAGATAGTGGCAT+CGG | 0.611836 | 8_1:+85261951 | None:intergenic |
| CAGGCGGCACGTCCTTCACA+GGG | 0.612651 | 8_1:+85263419 | None:intergenic |
| TTTAAAGCCCGGACAAATCG+AGG | 0.619965 | 8_1:+85262217 | None:intergenic |
| ATTGTCGTCACCGGCGACGA+AGG | 0.620712 | 8_1:-85263484 | Msa1221600:CDS |
| AAATCCAGTTAGGGCACGTG+AGG | 0.623472 | 8_1:+85263510 | None:intergenic |
| CGCCGACGGAAACCCTGTGA+AGG | 0.634478 | 8_1:-85263431 | Msa1221600:CDS |
| TTGCGGGATAGATTCCCAGA+AGG | 0.636017 | 8_1:-85261912 | Msa1221600:CDS |
| CCTAAACATCTGTCTCCCGA+TGG | 0.636457 | 8_1:-85263376 | Msa1221600:CDS |
| CACTGCGACTGTGACAGAGA+TGG | 0.638633 | 8_1:-85262181 | Msa1221600:CDS |
| GAAAGCAACCCACCTTTCCG+GGG | 0.639441 | 8_1:+85261339 | None:intergenic |
| TTCAGCATATACGCCTATAG+GGG | 0.643181 | 8_1:-85262418 | Msa1221600:intron |
| GCCGATCGCATGCATAAGTG+AGG | 0.648345 | 8_1:+85262953 | None:intergenic |
| GAGGTGTCGATGATTGTGAT+CGG | 0.651795 | 8_1:+85263349 | None:intergenic |
| AACTTTCTGAGCATAGTCCA+CGG | 0.660031 | 8_1:+85261810 | None:intergenic |
| CATCTCTGTCACAGTCGCAG+TGG | 0.670123 | 8_1:+85262182 | None:intergenic |
| AGATGTTTAGGCATCCTAGT+GGG | 0.681946 | 8_1:+85263388 | None:intergenic |
| GAATATTCATGAAATCAATG+TGG | 0.692164 | 8_1:+85261847 | None:intergenic |
| CAGATGTTTAGGCATCCTAG+TGG | 0.700074 | 8_1:+85263387 | None:intergenic |
| TGTTGTTGCCTGTAGTCCCG+AGG | 0.706598 | 8_1:-85263022 | Msa1221600:intron |
| CTAGTGGGTAACAGTACAGG+CGG | 0.726173 | 8_1:+85263403 | None:intergenic |
| AAGTTGCTGAACAAATACGG+CGG | 0.736750 | 8_1:-85262990 | Msa1221600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAGATAAATATATAAAA+CGG | - | chr8_1:85256478-85256497 | Msa1221600:intron | 10.0% |
| !! | AATAAAATATTAAACAACAT+TGG | + | chr8_1:85259075-85259094 | None:intergenic | 10.0% |
| !!! | TATTCATATATCTATATTTT+CGG | + | chr8_1:85261092-85261111 | None:intergenic | 10.0% |
| !!! | TCAATAGTTTTTTTTTATAT+AGG | - | chr8_1:85261500-85261519 | Msa1221600:intron | 10.0% |
| !! | AAAAATATGATAAACATTAC+CGG | + | chr8_1:85255908-85255927 | None:intergenic | 15.0% |
| !!! | ATCAAAATAAAAATCGATTT+AGG | - | chr8_1:85256013-85256032 | Msa1221600:intron | 15.0% |
| !!! | TCAAAATAAAAATCGATTTA+GGG | - | chr8_1:85256014-85256033 | Msa1221600:intron | 15.0% |
| !! | ACATATAATATTTGAAAACA+GGG | + | chr8_1:85256870-85256889 | None:intergenic | 15.0% |
| !! | TACATATAATATTTGAAAAC+AGG | + | chr8_1:85256871-85256890 | None:intergenic | 15.0% |
| !! | ATACTCAATAATTAAAGTTA+TGG | + | chr8_1:85259725-85259744 | None:intergenic | 15.0% |
| !! | TCAATATACAATAGAAATTA+TGG | - | chr8_1:85260098-85260117 | Msa1221600:intron | 15.0% |
| !! | AGATAAATAGCTATTTATTA+TGG | - | chr8_1:85260541-85260560 | Msa1221600:intron | 15.0% |
| !!! | ATTCATATATCTATATTTTC+GGG | + | chr8_1:85261091-85261110 | None:intergenic | 15.0% |
| !! | AACTTGAACTATATATAATT+CGG | - | chr8_1:85261385-85261404 | Msa1221600:CDS | 15.0% |
| !!! | TAGAATTTAAGATGTTTTAA+AGG | - | chr8_1:85261533-85261552 | Msa1221600:intron | 15.0% |
| !!! | ATACTATAATTGACTTATTT+AGG | - | chr8_1:85263348-85263367 | Msa1221600:CDS | 15.0% |
| !! | CATCAAAACAAAAATTATAA+AGG | + | chr8_1:85263405-85263424 | None:intergenic | 15.0% |
| !! | AAAATATGATAAACATTACC+GGG | + | chr8_1:85255907-85255926 | None:intergenic | 20.0% |
| !!! | CATAGTGGTATATTTAATTT+CGG | - | chr8_1:85256425-85256444 | Msa1221600:intron | 20.0% |
| !!! | CACTTTAATTTTCTTATTGA+AGG | - | chr8_1:85256905-85256924 | Msa1221600:intron | 20.0% |
| !!! | TTATTAGCTTATTTCATTGT+AGG | - | chr8_1:85257190-85257209 | Msa1221600:intron | 20.0% |
| !!! | ACTTAATCACATTTTTTCAT+TGG | - | chr8_1:85257815-85257834 | Msa1221600:intron | 20.0% |
| !!! | TTCTTCTTAAATTGATAATG+AGG | - | chr8_1:85257981-85258000 | Msa1221600:intron | 20.0% |
| !! | AAAAAAAATTTACACAACAC+AGG | + | chr8_1:85258027-85258046 | None:intergenic | 20.0% |
| !!! | TTTTTAGAGAAACTTTTTCT+TGG | - | chr8_1:85258043-85258062 | Msa1221600:intron | 20.0% |
| !! | GTTCTATCAAAAACTATATT+TGG | - | chr8_1:85258158-85258177 | Msa1221600:intron | 20.0% |
| !! | GGCATACATATAAAAAAAAT+GGG | + | chr8_1:85259019-85259038 | None:intergenic | 20.0% |
| !! | AGGCATACATATAAAAAAAA+TGG | + | chr8_1:85259020-85259039 | None:intergenic | 20.0% |
| !! | AATATTGCACATAAAATGTT+AGG | + | chr8_1:85259398-85259417 | None:intergenic | 20.0% |
| !! | AAAAAATCAATGTTAGTTCA+TGG | + | chr8_1:85259422-85259441 | None:intergenic | 20.0% |
| !! | TTATGAATTCAACAACAATA+AGG | + | chr8_1:85259752-85259771 | None:intergenic | 20.0% |
| !! | ATATTTGGTTATGCTATAAA+TGG | - | chr8_1:85260164-85260183 | Msa1221600:intron | 20.0% |
| !! | CTTAGTAAAATATTCATTGT+AGG | - | chr8_1:85260284-85260303 | Msa1221600:intron | 20.0% |
| !!! | GTTTCTATTCATAAAGTTTT+TGG | + | chr8_1:85260598-85260617 | None:intergenic | 20.0% |
| !! | AATAGAAACATTTAGCATAT+AGG | - | chr8_1:85260609-85260628 | Msa1221600:intron | 20.0% |
| !! | TGAATAATGTCTATATTAAC+TGG | - | chr8_1:85261106-85261125 | Msa1221600:intron | 20.0% |
| !! | ATGAAAGATAAATTGTAGAA+AGG | - | chr8_1:85261160-85261179 | Msa1221600:intron | 20.0% |
| !!! | TTTTTTATATAGGATTGAAG+TGG | - | chr8_1:85261510-85261529 | Msa1221600:intron | 20.0% |
| !!! | TTGTTATTCAAATATAGTAC+TGG | + | chr8_1:85261564-85261583 | None:intergenic | 20.0% |
| !! | AATAACTCATAATCTATGAA+TGG | - | chr8_1:85261604-85261623 | Msa1221600:intron | 20.0% |
| !! | ATTGATAAGATAGTACAAAT+AGG | - | chr8_1:85261668-85261687 | Msa1221600:intron | 20.0% |
| !! | TTATATGGTAAATAAAGAGT+GGG | + | chr8_1:85262362-85262381 | None:intergenic | 20.0% |
| !! | CTATTATGTAATAAAGAGTA+TGG | + | chr8_1:85262390-85262409 | None:intergenic | 20.0% |
| !! | TGATTATGTTGAAAATTCAT+TGG | + | chr8_1:85262804-85262823 | None:intergenic | 20.0% |
| !!! | GAATTTTCAACATAATCAAA+TGG | - | chr8_1:85262806-85262825 | Msa1221600:intron | 20.0% |
| !! | ATATCTGAATTAGTATCTAT+CGG | - | chr8_1:85263275-85263294 | Msa1221600:intron | 20.0% |
| ! | ATAAAGTTGCTGAACAAATA+CGG | - | chr8_1:85256235-85256254 | Msa1221600:intron | 25.0% |
| ! | ATCTCTTATTACACTTAGAA+AGG | + | chr8_1:85256466-85256485 | None:intergenic | 25.0% |
| ! | TAATTAGTATTCTGCAAGAA+TGG | - | chr8_1:85256504-85256523 | Msa1221600:intron | 25.0% |
| ! | AATTAGTATTCTGCAAGAAT+GGG | - | chr8_1:85256505-85256524 | Msa1221600:intron | 25.0% |
| ! | TTATGTGAATGTGAATAATC+TGG | + | chr8_1:85256598-85256617 | None:intergenic | 25.0% |
| ! | ATGTATGCATTATCTGAAAA+TGG | + | chr8_1:85256634-85256653 | None:intergenic | 25.0% |
| ! | GTTATATGAACTTAATGAAC+AGG | - | chr8_1:85256660-85256679 | Msa1221600:intron | 25.0% |
| ! | TCTTGATTGTAATAATACAG+AGG | + | chr8_1:85256843-85256862 | None:intergenic | 25.0% |
| ! | TTGGAATTTCGACAATATAA+CGG | + | chr8_1:85256981-85257000 | None:intergenic | 25.0% |
| ! | ACGACTTTGATGTTTAATAT+GGG | + | chr8_1:85257123-85257142 | None:intergenic | 25.0% |
| ! | TACGACTTTGATGTTTAATA+TGG | + | chr8_1:85257124-85257143 | None:intergenic | 25.0% |
| ! | GAATATTCATGAAATCAATG+TGG | + | chr8_1:85257384-85257403 | None:intergenic | 25.0% |
| ! | TGAAAGAATTGATCTCAAAA+TGG | + | chr8_1:85257568-85257587 | None:intergenic | 25.0% |
| !! | TTTTCAGATATTTTCTCAAC+CGG | - | chr8_1:85257769-85257788 | Msa1221600:intron | 25.0% |
| !! | AAACAATTCTTCAAGTTCTT+CGG | + | chr8_1:85257862-85257881 | None:intergenic | 25.0% |
| ! | CAAATTAATCAGACATGAAA+TGG | + | chr8_1:85257954-85257973 | None:intergenic | 25.0% |
| !! | TAGTTTTTGATAGAACACTA+TGG | + | chr8_1:85258154-85258173 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr8_1:85258198-85258217 | None:intergenic | 25.0% |
| !! | TTTTCTAATGGTTTCTCAAA+TGG | - | chr8_1:85258205-85258224 | Msa1221600:intron | 25.0% |
| ! | TTACACGGTTTAAATATCTT+GGG | + | chr8_1:85258675-85258694 | None:intergenic | 25.0% |
| ! | ATATTTAAACCGTGTAACTT+GGG | - | chr8_1:85258678-85258697 | Msa1221600:intron | 25.0% |
| !! | AATTGATGCATTTTTGTCAA+AGG | - | chr8_1:85259170-85259189 | Msa1221600:intron | 25.0% |
| ! | CTGTAAAGAAAACATATAGT+GGG | + | chr8_1:85259447-85259466 | None:intergenic | 25.0% |
| ! | ACTGTAAAGAAAACATATAG+TGG | + | chr8_1:85259448-85259467 | None:intergenic | 25.0% |
| !! | ACTATATGTTTTCTTTACAG+TGG | - | chr8_1:85259447-85259466 | Msa1221600:intron | 25.0% |
| !! | CTATATGTTTTCTTTACAGT+GGG | - | chr8_1:85259448-85259467 | Msa1221600:intron | 25.0% |
| !! | TGTTGAAATCTTTTATTCGA+TGG | - | chr8_1:85259657-85259676 | Msa1221600:intron | 25.0% |
| ! | TATGTTACCTATATGCTTTA+TGG | - | chr8_1:85259689-85259708 | Msa1221600:intron | 25.0% |
| ! | GGATTATAAACTTCTAGATA+AGG | + | chr8_1:85259781-85259800 | None:intergenic | 25.0% |
| ! | GAAGTTTATAATCCAACTAA+CGG | - | chr8_1:85259787-85259806 | Msa1221600:intron | 25.0% |
| ! | AAGTTTATAATCCAACTAAC+GGG | - | chr8_1:85259788-85259807 | Msa1221600:intron | 25.0% |
| ! | TATGGTAAATGATACATGAT+CGG | - | chr8_1:85259843-85259862 | Msa1221600:intron | 25.0% |
| ! | CATGAAATTATGTCTAACAT+TGG | + | chr8_1:85260201-85260220 | None:intergenic | 25.0% |
| !!! | GACATAATTTCATGTTGTTT+TGG | - | chr8_1:85260207-85260226 | Msa1221600:intron | 25.0% |
| !! | TTTTCATGAACTTAAGCATT+TGG | - | chr8_1:85260461-85260480 | Msa1221600:intron | 25.0% |
| !!! | TTTCTGAAATACTTGAATGA+GGG | + | chr8_1:85260842-85260861 | None:intergenic | 25.0% |
| ! | AGTTGCAATTATAAAATGCT+GGG | - | chr8_1:85261921-85261940 | Msa1221600:CDS | 25.0% |
| !!! | AGTATTTTAGTGCGTATTTT+AGG | - | chr8_1:85262012-85262031 | Msa1221600:intron | 25.0% |
| !!! | GTATTTTAGTGCGTATTTTA+GGG | - | chr8_1:85262013-85262032 | Msa1221600:intron | 25.0% |
| ! | GTTATATGGTAAATAAAGAG+TGG | + | chr8_1:85262363-85262382 | None:intergenic | 25.0% |
| !! | TTCATGTGTTATGTATCTTT+TGG | - | chr8_1:85262494-85262513 | Msa1221600:CDS | 25.0% |
| !! | AATAATGGAAATGAAAGACT+TGG | + | chr8_1:85262637-85262656 | None:intergenic | 25.0% |
| ! | AACAAAAAATGGGTGAATAA+TGG | + | chr8_1:85262652-85262671 | None:intergenic | 25.0% |
| ! | TTAGTAATGTGTTCAAGTAA+TGG | + | chr8_1:85262758-85262777 | None:intergenic | 25.0% |
| ! | ATTACAAACATACCCTTAAA+CGG | + | chr8_1:85262949-85262968 | None:intergenic | 25.0% |
| !! | TTTAAGGGTATGTTTGTAAT+AGG | - | chr8_1:85262949-85262968 | Msa1221600:CDS | 25.0% |
| ! | ATAAATATAGATAGATGCAG+AGG | - | chr8_1:85263086-85263105 | Msa1221600:intron | 25.0% |
| ! | AGATTATCGGATAGTAATAA+GGG | + | chr8_1:85263220-85263239 | None:intergenic | 25.0% |
| ! | TATCTGAATTAGTATCTATC+GGG | - | chr8_1:85263276-85263295 | Msa1221600:intron | 25.0% |
| !! | ATAATTGACTTATTTAGGTC+AGG | - | chr8_1:85263353-85263372 | Msa1221600:CDS | 25.0% |
| ! | CATCACACTTAATGCAATTT+TGG | + | chr8_1:85256142-85256161 | None:intergenic | 30.0% |
| AAAGATTAGATGCAAAAGAG+AGG | + | chr8_1:85256373-85256392 | None:intergenic | 30.0% | |
| TTGCATCTAATCTTTGTTAG+TGG | - | chr8_1:85256378-85256397 | Msa1221600:intron | 30.0% | |
| CATTGCATTTGTATTCATAG+TGG | - | chr8_1:85256410-85256429 | Msa1221600:intron | 30.0% | |
| CTTATTACACTTAGAAAGGA+TGG | + | chr8_1:85256462-85256481 | None:intergenic | 30.0% | |
| !! | CAATATTGATTTCAACCTCT+GGG | + | chr8_1:85256786-85256805 | None:intergenic | 30.0% |
| ! | AATAACAGACTTTTGTGCAA+AGG | + | chr8_1:85256946-85256965 | None:intergenic | 30.0% |
| ! | ATTTAGTTCAGCAGCATTAA+GGG | + | chr8_1:85257075-85257094 | None:intergenic | 30.0% |
| ! | TGCTGAACTAAATGATTTTC+AGG | - | chr8_1:85257082-85257101 | Msa1221600:intron | 30.0% |
| TGTTTAATATGGGAAGGAAA+AGG | + | chr8_1:85257113-85257132 | None:intergenic | 30.0% | |
| CTTTGATGTTTAATATGGGA+AGG | + | chr8_1:85257119-85257138 | None:intergenic | 30.0% | |
| AATATTAAAGATCGTGTGAG+CGG | + | chr8_1:85257721-85257740 | None:intergenic | 30.0% | |
| ATTTGTATATCACCATAAGC+CGG | + | chr8_1:85257791-85257810 | None:intergenic | 30.0% | |
| GCTTATGGTGATATACAAAT+TGG | - | chr8_1:85257791-85257810 | Msa1221600:intron | 30.0% | |
| !!! | TCACATTTTTTCATTGGTTC+AGG | - | chr8_1:85257821-85257840 | Msa1221600:intron | 30.0% |
| !!! | ATTTTTTCATTGGTTCAGGA+TGG | - | chr8_1:85257825-85257844 | Msa1221600:intron | 30.0% |
| !!! | TTTTTTCATTGGTTCAGGAT+GGG | - | chr8_1:85257826-85257845 | Msa1221600:intron | 30.0% |
| ! | AACAATTCTTCAAGTTCTTC+GGG | + | chr8_1:85257861-85257880 | None:intergenic | 30.0% |
| ATTAATCAGACATGAAATGG+AGG | + | chr8_1:85257951-85257970 | None:intergenic | 30.0% | |
| !! | CATGTCTGATTAATTTGCAT+TGG | - | chr8_1:85257957-85257976 | Msa1221600:intron | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr8_1:85258193-85258212 | Msa1221600:intron | 30.0% |
| ! | GTTTCTCAAATGGTTTTCTT+TGG | - | chr8_1:85258215-85258234 | Msa1221600:intron | 30.0% |
| TGTAAGAAGAGTAGATCAAA+TGG | + | chr8_1:85258273-85258292 | None:intergenic | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | chr8_1:85258274-85258293 | Msa1221600:intron | 30.0% | |
| GAAAATAGGTTTAGATGGTT+TGG | + | chr8_1:85258326-85258345 | None:intergenic | 30.0% | |
| TGGTAGAAAATAGGTTTAGA+TGG | + | chr8_1:85258331-85258350 | None:intergenic | 30.0% | |
| !! | GTAGAAAGTTGGTAGAAAAT+AGG | + | chr8_1:85258340-85258359 | None:intergenic | 30.0% |
| TTCTACCAACTTTCTACAAT+AGG | - | chr8_1:85258343-85258362 | Msa1221600:intron | 30.0% | |
| TAAATCATCGTATTCAAGCT+GGG | + | chr8_1:85258615-85258634 | None:intergenic | 30.0% | |
| GTTACACGGTTTAAATATCT+TGG | + | chr8_1:85258676-85258695 | None:intergenic | 30.0% | |
| GATATTTAAACCGTGTAACT+TGG | - | chr8_1:85258677-85258696 | Msa1221600:intron | 30.0% | |
| TATTTAAACCGTGTAACTTG+GGG | - | chr8_1:85258679-85258698 | Msa1221600:intron | 30.0% | |
| ACAAGTTAAGAAGCTAGAAA+GGG | + | chr8_1:85258971-85258990 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTAATTTCAGTCCC+TGG | - | chr8_1:85259094-85259113 | Msa1221600:intron | 30.0% |
| GTGGAGAATCTGATTTATAT+TGG | - | chr8_1:85259503-85259522 | Msa1221600:intron | 30.0% | |
| CTATATGCTTTATGGTACAT+CGG | - | chr8_1:85259697-85259716 | Msa1221600:intron | 30.0% | |
| TGTTGTTGAATTCATAATGC+AGG | - | chr8_1:85259755-85259774 | Msa1221600:intron | 30.0% | |
| AGTTTATAATCCAACTAACG+GGG | - | chr8_1:85259789-85259808 | Msa1221600:intron | 30.0% | |
| !! | GAATGTCGTTGATAATTCTA+TGG | - | chr8_1:85259825-85259844 | Msa1221600:intron | 30.0% |
| ! | TGTTTTATCATTTTGCTTGC+AGG | - | chr8_1:85259933-85259952 | Msa1221600:intron | 30.0% |
| ! | GTTTTATCATTTTGCTTGCA+GGG | - | chr8_1:85259934-85259953 | Msa1221600:intron | 30.0% |
| ! | ATGGATTACATTTGATACGT+AGG | - | chr8_1:85260117-85260136 | Msa1221600:intron | 30.0% |
| ! | TAGGTATTATGTAGAGTACT+TGG | - | chr8_1:85260136-85260155 | Msa1221600:intron | 30.0% |
| ! | AGGTATTATGTAGAGTACTT+GGG | - | chr8_1:85260137-85260156 | Msa1221600:intron | 30.0% |
| CTAAGTACATGAGAAAATGT+TGG | - | chr8_1:85260252-85260271 | Msa1221600:intron | 30.0% | |
| TGAGCAAAATTCATTTCCAA+CGG | - | chr8_1:85260414-85260433 | Msa1221600:intron | 30.0% | |
| ATATGGCTGTAGATAATTGT+TGG | - | chr8_1:85260512-85260531 | Msa1221600:intron | 30.0% | |
| GACTAACCTACAAAATGAAT+TGG | + | chr8_1:85260644-85260663 | None:intergenic | 30.0% | |
| !! | ATTCATTTTGTAGGTTAGTC+AGG | - | chr8_1:85260644-85260663 | Msa1221600:intron | 30.0% |
| !! | GTTTCTGAAATACTTGAATG+AGG | + | chr8_1:85260843-85260862 | None:intergenic | 30.0% |
| TTTCAGGATTGCTTAAATGA+GGG | + | chr8_1:85260875-85260894 | None:intergenic | 30.0% | |
| TTTCGGGAATTCTTAAATGA+GGG | + | chr8_1:85260908-85260927 | None:intergenic | 30.0% | |
| ! | TCTGTTTGTTTCAGGTATAT+TGG | - | chr8_1:85260980-85260999 | Msa1221600:intron | 30.0% |
| !! | AACTAGAATAAGCTTGTTGT+TGG | - | chr8_1:85261062-85261081 | Msa1221600:intron | 30.0% |
| !! | ACTAGAATAAGCTTGTTGTT+GGG | - | chr8_1:85261063-85261082 | Msa1221600:intron | 30.0% |
| ! | TATATATAATTCGGCTCGTT+TGG | - | chr8_1:85261394-85261413 | Msa1221600:intron | 30.0% |
| GAGTTGCAATTATAAAATGC+TGG | - | chr8_1:85261920-85261939 | Msa1221600:CDS | 30.0% | |
| !!! | TTTTAAGTTTACGAGCAACT+CGG | + | chr8_1:85262107-85262126 | None:intergenic | 30.0% |
| AGTAGTATAAATAGTGAGGT+GGG | + | chr8_1:85262306-85262325 | None:intergenic | 30.0% | |
| TAGTAGTATAAATAGTGAGG+TGG | + | chr8_1:85262307-85262326 | None:intergenic | 30.0% | |
| ACCTCACTATTTATACTACT+AGG | - | chr8_1:85262306-85262325 | Msa1221600:intron | 30.0% | |
| ! | AAGAGTATGGTGATGTTATA+TGG | + | chr8_1:85262377-85262396 | None:intergenic | 30.0% |
| TGATAGAAACCTAAGTATGA+GGG | + | chr8_1:85262429-85262448 | None:intergenic | 30.0% | |
| AAGATTACAAGAGAACACTT+TGG | + | chr8_1:85262542-85262561 | None:intergenic | 30.0% | |
| ! | AAGGGCATGAAACAAAAAAT+GGG | + | chr8_1:85262662-85262681 | None:intergenic | 30.0% |
| GAGATTATCGGATAGTAATA+AGG | + | chr8_1:85263221-85263240 | None:intergenic | 30.0% | |
| ATGATTAATCCGTGGTATTT+GGG | + | chr8_1:85263243-85263262 | None:intergenic | 30.0% | |
| AATGATTAATCCGTGGTATT+TGG | + | chr8_1:85263244-85263263 | None:intergenic | 30.0% | |
| ! | AAATACCACGGATTAATCAT+TGG | - | chr8_1:85263243-85263262 | Msa1221600:intron | 30.0% |
| AAATACCAATGATTAATCCG+TGG | + | chr8_1:85263251-85263270 | None:intergenic | 30.0% | |
| TTTGATGTTTATATTGCAGC+TGG | - | chr8_1:85263418-85263437 | Msa1221600:CDS | 30.0% | |
| GACAATACGAAATCCAGTTA+GGG | + | chr8_1:85255730-85255749 | None:intergenic | 35.0% | |
| AAGTTTAACTGCACCAAAAG+TGG | - | chr8_1:85255932-85255951 | Msa1221600:intron | 35.0% | |
| ! | TTGAAAGTCTGAGTGCATTT+TGG | - | chr8_1:85256307-85256326 | Msa1221600:intron | 35.0% |
| TTGCAAGCAGCAACTATAAT+GGG | + | chr8_1:85256694-85256713 | None:intergenic | 35.0% | |
| !! | TCTGGGAATTTTTGGATTAC+TGG | + | chr8_1:85256769-85256788 | None:intergenic | 35.0% |
| AGTAATCCAAAAATTCCCAG+AGG | - | chr8_1:85256768-85256787 | Msa1221600:intron | 35.0% | |
| !! | TTTCAACCTCTGGGAATTTT+TGG | + | chr8_1:85256777-85256796 | None:intergenic | 35.0% |
| !! | CCAATATTGATTTCAACCTC+TGG | + | chr8_1:85256787-85256806 | None:intergenic | 35.0% |
| CCAGAGGTTGAAATCAATAT+TGG | - | chr8_1:85256784-85256803 | Msa1221600:intron | 35.0% | |
| !! | AAAGTCTGTTATTTCCCCTT+CGG | - | chr8_1:85256953-85256972 | Msa1221600:intron | 35.0% |
| !! | TAAAAATGCGCTTTAAAGCC+CGG | + | chr8_1:85257025-85257044 | None:intergenic | 35.0% |
| ! | CATTTAGTTCAGCAGCATTA+AGG | + | chr8_1:85257076-85257095 | None:intergenic | 35.0% |
| AAGCTAATAATCAAGCGACA+GGG | + | chr8_1:85257180-85257199 | None:intergenic | 35.0% | |
| TAAGCTAATAATCAAGCGAC+AGG | + | chr8_1:85257181-85257200 | None:intergenic | 35.0% | |
| TATTTAACCTGTAGATGGTC+TGG | + | chr8_1:85257247-85257266 | None:intergenic | 35.0% | |
| CGACATATTTAACCTGTAGA+TGG | + | chr8_1:85257252-85257271 | None:intergenic | 35.0% | |
| AGATTCGCAATTCTAGATAG+TGG | + | chr8_1:85257286-85257305 | None:intergenic | 35.0% | |
| CTAGAATTGCGAATCTAATG+AGG | - | chr8_1:85257290-85257309 | Msa1221600:intron | 35.0% | |
| ! | CGAATCTAATGAGGTTTTTG+CGG | - | chr8_1:85257299-85257318 | Msa1221600:intron | 35.0% |
| ! | GAATCTAATGAGGTTTTTGC+GGG | - | chr8_1:85257300-85257319 | Msa1221600:intron | 35.0% |
| ! | ACTTGCTGATCATCTAATTC+CGG | - | chr8_1:85257462-85257481 | Msa1221600:intron | 35.0% |
| ATATTAAAGATCGTGTGAGC+GGG | + | chr8_1:85257720-85257739 | None:intergenic | 35.0% | |
| !! | ATATTTTCTCAACCGGCTTA+TGG | - | chr8_1:85257776-85257795 | Msa1221600:intron | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr8_1:85258186-85258205 | None:intergenic | 35.0% | |
| AGTCAGATTAAAAGAGGTAG+AGG | + | chr8_1:85258245-85258264 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr8_1:85258270-85258289 | None:intergenic | 35.0% | |
| TAGCACCTATTGTAGAAAGT+TGG | + | chr8_1:85258351-85258370 | None:intergenic | 35.0% | |
| ATTTCTAATCCTATCCTGTC+TGG | - | chr8_1:85258396-85258415 | Msa1221600:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr8_1:85258550-85258569 | None:intergenic | 35.0% |
| GTAAATCATCGTATTCAAGC+TGG | + | chr8_1:85258616-85258635 | None:intergenic | 35.0% | |
| ! | AAATGACGGAGAAATAGAAG+CGG | + | chr8_1:85258641-85258660 | None:intergenic | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr8_1:85258648-85258667 | Msa1221600:intron | 35.0% |
| ATATCATACCCCAAGTTACA+CGG | + | chr8_1:85258690-85258709 | None:intergenic | 35.0% | |
| TGGAATGTAACTTCAGCAAA+AGG | + | chr8_1:85258750-85258769 | None:intergenic | 35.0% | |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr8_1:85258883-85258902 | Msa1221600:intron | 35.0% |
| CACAAGTTAAGAAGCTAGAA+AGG | + | chr8_1:85258972-85258991 | None:intergenic | 35.0% | |
| TATGTATGCCTTTCCCAAAT+TGG | - | chr8_1:85259029-85259048 | Msa1221600:intron | 35.0% | |
| ATGTATGCCTTTCCCAAATT+GGG | - | chr8_1:85259030-85259049 | Msa1221600:intron | 35.0% | |
| CAACATTGACATCCCAATTT+GGG | + | chr8_1:85259045-85259064 | None:intergenic | 35.0% | |
| TCAACATTGACATCCCAATT+TGG | + | chr8_1:85259046-85259065 | None:intergenic | 35.0% | |
| ! | TTTAATTTCAGTCCCTGGAT+CGG | - | chr8_1:85259099-85259118 | Msa1221600:intron | 35.0% |
| AGATTCTCCACACTAAAAGT+TGG | + | chr8_1:85259494-85259513 | None:intergenic | 35.0% | |
| !!! | TACTCCAGTGCTTTGTTTTT+GGG | - | chr8_1:85259609-85259628 | Msa1221600:intron | 35.0% |
| CGATGTACCATAAAGCATAT+AGG | + | chr8_1:85259699-85259718 | None:intergenic | 35.0% | |
| ! | CTGAGAGAAATTTCTGAAGA+TGG | - | chr8_1:85259976-85259995 | Msa1221600:intron | 35.0% |
| ! | GAAATTTCTGAAGATGGAGT+TGG | - | chr8_1:85259982-85260001 | Msa1221600:intron | 35.0% |
| GTTGGCGAATAATAAGTCTT+TGG | - | chr8_1:85260011-85260030 | Msa1221600:intron | 35.0% | |
| GAGTACTTGGGTCATATATT+TGG | - | chr8_1:85260149-85260168 | Msa1221600:intron | 35.0% | |
| !!! | TGTTGTTTTGGTGTCAATTG+TGG | - | chr8_1:85260219-85260238 | Msa1221600:intron | 35.0% |
| CATCTTTAGCTGCAACTATA+AGG | + | chr8_1:85260396-85260415 | None:intergenic | 35.0% | |
| TACATGATTGAGCTTGCATA+TGG | - | chr8_1:85260495-85260514 | Msa1221600:intron | 35.0% | |
| TTTCAGGAATGCTTAGATGA+GGG | + | chr8_1:85260758-85260777 | None:intergenic | 35.0% | |
| ! | CTTTTTCTGACTTCAGTTTC+AGG | + | chr8_1:85260774-85260793 | None:intergenic | 35.0% |
| GTTTCAGGATTGCTTAAATG+AGG | + | chr8_1:85260876-85260895 | None:intergenic | 35.0% | |
| GTTTCGGGAATTCTTAAATG+AGG | + | chr8_1:85260909-85260928 | None:intergenic | 35.0% | |
| CTATTTCCAACTTCAGTTTC+GGG | + | chr8_1:85260924-85260943 | None:intergenic | 35.0% | |
| ! | GCTATTTCCAACTTCAGTTT+CGG | + | chr8_1:85260925-85260944 | None:intergenic | 35.0% |
| AATCCTCTTCTGTTTGTTTC+AGG | - | chr8_1:85260972-85260991 | Msa1221600:intron | 35.0% | |
| ATACCTGAAACAAACAGAAG+AGG | + | chr8_1:85260978-85260997 | None:intergenic | 35.0% | |
| !! | CTTTAAGATGCTAACTCAAC+GGG | + | chr8_1:85261023-85261042 | None:intergenic | 35.0% |
| !! | GCTTTAAGATGCTAACTCAA+CGG | + | chr8_1:85261024-85261043 | None:intergenic | 35.0% |
| TCTAGTTAGCATACATGATC+TGG | + | chr8_1:85261049-85261068 | None:intergenic | 35.0% | |
| !! | AAGAGTGTTCTCTTTCTTTG+AGG | + | chr8_1:85261217-85261236 | None:intergenic | 35.0% |
| TCTTTCTTTGCCTAACCATA+GGG | - | chr8_1:85261233-85261252 | Msa1221600:intron | 35.0% | |
| !!! | GAACTTTTTTCGAGTTGTCT+CGG | + | chr8_1:85261270-85261289 | None:intergenic | 35.0% |
| GAGACAACTCGAAAAAAGTT+CGG | - | chr8_1:85261269-85261288 | Msa1221600:intron | 35.0% | |
| TAACTCAAGTTCAGCTCATT+TGG | + | chr8_1:85261336-85261355 | None:intergenic | 35.0% | |
| ACAAGAGATAGTTATCTAGC+TGG | - | chr8_1:85261747-85261766 | Msa1221600:CDS | 35.0% | |
| GTGGGACTATTACTAATTGT+TGG | + | chr8_1:85261803-85261822 | None:intergenic | 35.0% | |
| AGCGCATATAAGAAAGTAAG+AGG | - | chr8_1:85261827-85261846 | Msa1221600:CDS | 35.0% | |
| !!! | TTAGTGCGTATTTTAGGGTT+AGG | - | chr8_1:85262018-85262037 | Msa1221600:intron | 35.0% |
| TCGAACTCGAGCTAAAAAAA+AGG | - | chr8_1:85262132-85262151 | Msa1221600:intron | 35.0% | |
| TAGGGCAATTATGGTTAGTA+GGG | + | chr8_1:85262253-85262272 | None:intergenic | 35.0% | |
| GATTATTGCTAGGGCAATTA+TGG | + | chr8_1:85262262-85262281 | None:intergenic | 35.0% | |
| GGTATGCAAGATTATTGCTA+GGG | + | chr8_1:85262271-85262290 | None:intergenic | 35.0% | |
| TGAGGTGGGTAAATTGTAAT+GGG | + | chr8_1:85262292-85262311 | None:intergenic | 35.0% | |
| GCCTAGTAGTATAAATAGTG+AGG | + | chr8_1:85262310-85262329 | None:intergenic | 35.0% | |
| TACTACTAGGCATAACAAAC+TGG | - | chr8_1:85262319-85262338 | Msa1221600:intron | 35.0% | |
| !! | AGTGGGTTAGAATGCTTAAT+TGG | + | chr8_1:85262345-85262364 | None:intergenic | 35.0% |
| AACCTAAGTATGAGGGATAA+GGG | + | chr8_1:85262422-85262441 | None:intergenic | 35.0% | |
| AAACCTAAGTATGAGGGATA+AGG | + | chr8_1:85262423-85262442 | None:intergenic | 35.0% | |
| GTGATAGAAACCTAAGTATG+AGG | + | chr8_1:85262430-85262449 | None:intergenic | 35.0% | |
| AAGATACAAGTCACATCGAA+CGG | + | chr8_1:85262472-85262491 | None:intergenic | 35.0% | |
| GTTCTCTTGTAATCTTGAAG+TGG | - | chr8_1:85262546-85262565 | Msa1221600:CDS | 35.0% | |
| GCTGAAGCAAAACACAAATA+TGG | + | chr8_1:85262584-85262603 | None:intergenic | 35.0% | |
| ! | GAAGGGCATGAAACAAAAAA+TGG | + | chr8_1:85262663-85262682 | None:intergenic | 35.0% |
| TTTCATGCCCTTCTAATTTG+TGG | - | chr8_1:85262670-85262689 | Msa1221600:intron | 35.0% | |
| TGTCACTCCACAAATTAGAA+GGG | + | chr8_1:85262680-85262699 | None:intergenic | 35.0% | |
| TTGTCACTCCACAAATTAGA+AGG | + | chr8_1:85262681-85262700 | None:intergenic | 35.0% | |
| ! | TTCTAATTTGTGGAGTGACA+AGG | - | chr8_1:85262680-85262699 | Msa1221600:intron | 35.0% |
| TTACCAAGTTCGTGCATTAT+AGG | - | chr8_1:85262854-85262873 | Msa1221600:intron | 35.0% | |
| TACCAAGTTCGTGCATTATA+GGG | - | chr8_1:85262855-85262874 | Msa1221600:intron | 35.0% | |
| TGTTTGTAATAGGACTCCTA+AGG | - | chr8_1:85262959-85262978 | Msa1221600:CDS | 35.0% | |
| GTTTGTAATAGGACTCCTAA+GGG | - | chr8_1:85262960-85262979 | Msa1221600:CDS | 35.0% | |
| ATTCTATAACTTCTGCCCTT+AGG | + | chr8_1:85262978-85262997 | None:intergenic | 35.0% | |
| ATAGATAGATGCAGAGGAAA+TGG | - | chr8_1:85263092-85263111 | Msa1221600:intron | 35.0% | |
| !! | ATTTTGTACGTGGGTTGTTA+TGG | - | chr8_1:85263127-85263146 | Msa1221600:intron | 35.0% |
| !! | AAGTTTTGTGGATGAGTTGA+GGG | - | chr8_1:85263494-85263513 | Msa1221600:CDS | 35.0% |
| CGACAATACGAAATCCAGTT+AGG | + | chr8_1:85255731-85255750 | None:intergenic | 40.0% | |
| AGATGTTTAGGCATCCTAGT+GGG | + | chr8_1:85255843-85255862 | None:intergenic | 40.0% | |
| TGATAAACATTACCGGGAAG+AGG | + | chr8_1:85255901-85255920 | None:intergenic | 40.0% | |
| !! | TATAGACAGATCGCCACTTT+TGG | + | chr8_1:85255948-85255967 | None:intergenic | 40.0% |
| CAAAACAGAAGCTGACAAAG+TGG | + | chr8_1:85255989-85256008 | None:intergenic | 40.0% | |
| TGCCATGTCAGCATGTTTAA+TGG | - | chr8_1:85256068-85256087 | Msa1221600:intron | 40.0% | |
| GCCATGTCAGCATGTTTAAT+GGG | - | chr8_1:85256069-85256088 | Msa1221600:intron | 40.0% | |
| TCCCATTAAACATGCTGACA+TGG | + | chr8_1:85256073-85256092 | None:intergenic | 40.0% | |
| TAAACAATTGCCACCACTGT+TGG | - | chr8_1:85256095-85256114 | Msa1221600:intron | 40.0% | |
| AAACAATTGCCACCACTGTT+GGG | - | chr8_1:85256096-85256115 | Msa1221600:intron | 40.0% | |
| AGCAACTTTATCTCTGTCCT+CGG | + | chr8_1:85256226-85256245 | None:intergenic | 40.0% | |
| AAGTTGCTGAACAAATACGG+CGG | - | chr8_1:85256238-85256257 | Msa1221600:intron | 40.0% | |
| TAGTATTCTGCAAGAATGGG+AGG | - | chr8_1:85256508-85256527 | Msa1221600:intron | 40.0% | |
| AGTATTCTGCAAGAATGGGA+GGG | - | chr8_1:85256509-85256528 | Msa1221600:intron | 40.0% | |
| CTTGCAAGCAGCAACTATAA+TGG | + | chr8_1:85256695-85256714 | None:intergenic | 40.0% | |
| TGTTCAGCATATACGCCTAT+AGG | - | chr8_1:85256808-85256827 | Msa1221600:intron | 40.0% | |
| GTTCAGCATATACGCCTATA+GGG | - | chr8_1:85256809-85256828 | Msa1221600:intron | 40.0% | |
| TTCAGCATATACGCCTATAG+GGG | - | chr8_1:85256810-85256829 | Msa1221600:intron | 40.0% | |
| !! | AAGTCTGTTATTTCCCCTTC+GGG | - | chr8_1:85256954-85256973 | Msa1221600:intron | 40.0% |
| ! | AAATCGAGGTGTTAGAGTCT+TGG | + | chr8_1:85257000-85257019 | None:intergenic | 40.0% |
| ! | GCAATTCTAGATAGTGGCAT+CGG | + | chr8_1:85257280-85257299 | None:intergenic | 40.0% |
| CACTTTCATTCACACCTTCT+GGG | + | chr8_1:85257333-85257352 | None:intergenic | 40.0% | |
| !! | GAAAGTGGACTTACTTTTGC+AGG | - | chr8_1:85257346-85257365 | Msa1221600:intron | 40.0% |
| AACTTTCTGAGCATAGTCCA+CGG | + | chr8_1:85257421-85257440 | None:intergenic | 40.0% | |
| TGGACTATGCTCAGAAAGTT+TGG | - | chr8_1:85257421-85257440 | Msa1221600:intron | 40.0% | |
| TCAGGATCACGTTTCAAATC+CGG | + | chr8_1:85257484-85257503 | None:intergenic | 40.0% | |
| ! | TTTGAAACGTGATCCTGATC+AGG | - | chr8_1:85257486-85257505 | Msa1221600:intron | 40.0% |
| AATAGAAGATGCACCTGATC+AGG | + | chr8_1:85257502-85257521 | None:intergenic | 40.0% | |
| ! | AGAATTGTTTTCTACTGCCC+CGG | - | chr8_1:85257872-85257891 | Msa1221600:intron | 40.0% |
| GATAATGAGGCAGTTTGATG+TGG | - | chr8_1:85257994-85258013 | Msa1221600:intron | 40.0% | |
| ! | CAAGCCTTATCACACTAAGT+GGG | - | chr8_1:85258104-85258123 | Msa1221600:intron | 40.0% |
| ! | AAGCCTTATCACACTAAGTG+GGG | - | chr8_1:85258105-85258124 | Msa1221600:intron | 40.0% |
| GAGGAGAGTCAGATTAAAAG+AGG | + | chr8_1:85258251-85258270 | None:intergenic | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | - | chr8_1:85258283-85258302 | Msa1221600:intron | 40.0% | |
| CGAGAGTAAAGTAAGTGTAG+CGG | + | chr8_1:85258455-85258474 | None:intergenic | 40.0% | |
| CACTTACTTTACTCTCGTGT+TGG | - | chr8_1:85258458-85258477 | Msa1221600:intron | 40.0% | |
| AGCTGAAAGGAAAGGTCTAT+CGG | + | chr8_1:85258537-85258556 | None:intergenic | 40.0% | |
| ACCTTTCCTTTCAGCTTAAG+TGG | - | chr8_1:85258541-85258560 | Msa1221600:intron | 40.0% | |
| ACCACTTAAGCTGAAAGGAA+AGG | + | chr8_1:85258545-85258564 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr8_1:85258655-85258674 | None:intergenic | 40.0% | |
| ACTTCAGCAAAAGGAGAAGT+GGG | + | chr8_1:85258741-85258760 | None:intergenic | 40.0% | |
| AACTTCAGCAAAAGGAGAAG+TGG | + | chr8_1:85258742-85258761 | None:intergenic | 40.0% | |
| TAGAAGCAAGACGGAGTATA+TGG | + | chr8_1:85258770-85258789 | None:intergenic | 40.0% | |
| !! | CTTCTTAACTTGTGCCCTTA+GGG | - | chr8_1:85258978-85258997 | Msa1221600:intron | 40.0% |
| TTGACATCCCAATTTGGGAA+AGG | + | chr8_1:85259040-85259059 | None:intergenic | 40.0% | |
| TCAACAAAATGCGAGGAAGA+GGG | + | chr8_1:85259240-85259259 | None:intergenic | 40.0% | |
| TTCAACAAAATGCGAGGAAG+AGG | + | chr8_1:85259241-85259260 | None:intergenic | 40.0% | |
| AGCTTGCATTTCCATATGTC+TGG | - | chr8_1:85259351-85259370 | Msa1221600:intron | 40.0% | |
| AGATACACAGACCAGACATA+TGG | + | chr8_1:85259365-85259384 | None:intergenic | 40.0% | |
| !! | TCTAGAGCCAACTTTTAGTG+TGG | - | chr8_1:85259484-85259503 | Msa1221600:intron | 40.0% |
| !!! | GTACTCCAGTGCTTTGTTTT+TGG | - | chr8_1:85259608-85259627 | Msa1221600:intron | 40.0% |
| ACATAATGATCCCCGTTAGT+TGG | + | chr8_1:85259802-85259821 | None:intergenic | 40.0% | |
| GCAGGGAAACAAGAAATATC+TGG | - | chr8_1:85259951-85259970 | Msa1221600:intron | 40.0% | |
| GAAAACTGCAATGTCACAAG+AGG | + | chr8_1:85260037-85260056 | None:intergenic | 40.0% | |
| ! | TTGCAGTTTTCGTTCATGAC+AGG | - | chr8_1:85260046-85260065 | Msa1221600:intron | 40.0% |
| CATGACGAGCAATTTCTACA+AGG | + | chr8_1:85260345-85260364 | None:intergenic | 40.0% | |
| CTTGTAGAAATTGCTCGTCA+TGG | - | chr8_1:85260343-85260362 | Msa1221600:intron | 40.0% | |
| ! | TGGAGAAGATAATGGCTTTG+AGG | - | chr8_1:85260363-85260382 | Msa1221600:intron | 40.0% |
| TTAGCTGCAACTATAAGGCA+AGG | + | chr8_1:85260391-85260410 | None:intergenic | 40.0% | |
| GGCTACACAAGAGTTAACTA+GGG | - | chr8_1:85260435-85260454 | Msa1221600:intron | 40.0% | |
| GGCTGTAGATAATTGTTGGA+TGG | - | chr8_1:85260516-85260535 | Msa1221600:intron | 40.0% | |
| ! | GACGTGCCAATTCATTTTGT+AGG | - | chr8_1:85260635-85260654 | Msa1221600:intron | 40.0% |
| ! | TTTGTAGGTTAGTCAGGACT+TGG | - | chr8_1:85260650-85260669 | Msa1221600:intron | 40.0% |
| ! | TTGTAGGTTAGTCAGGACTT+GGG | - | chr8_1:85260651-85260670 | Msa1221600:intron | 40.0% |
| GTTTCAGGAATGCTTAGATG+AGG | + | chr8_1:85260759-85260778 | None:intergenic | 40.0% | |
| CTGAAGTCAGAAAAAGTCAC+AGG | - | chr8_1:85260778-85260797 | Msa1221600:intron | 40.0% | |
| AGAATTCCCGAAACTGAAGT+TGG | - | chr8_1:85260915-85260934 | Msa1221600:intron | 40.0% | |
| CTCTTTCTTTGCCTAACCAT+AGG | - | chr8_1:85261232-85261251 | Msa1221600:intron | 40.0% | |
| GACAATTAGCTCGTTGAACT+TGG | - | chr8_1:85261302-85261321 | Msa1221600:intron | 40.0% | |
| TTCTTATATGCGCTCGATGT+GGG | + | chr8_1:85261821-85261840 | None:intergenic | 40.0% | |
| TTTCTTATATGCGCTCGATG+TGG | + | chr8_1:85261822-85261841 | None:intergenic | 40.0% | |
| !! | GAGTGTTGAGTGATCTTTAC+TGG | - | chr8_1:85261870-85261889 | Msa1221600:CDS | 40.0% |
| TTAGGGTTAGGTGTACAGTT+TGG | - | chr8_1:85262030-85262049 | Msa1221600:intron | 40.0% | |
| CTAGGGCAATTATGGTTAGT+AGG | + | chr8_1:85262254-85262273 | None:intergenic | 40.0% | |
| GGGTATGCAAGATTATTGCT+AGG | + | chr8_1:85262272-85262291 | None:intergenic | 40.0% | |
| GTGAGGTGGGTAAATTGTAA+TGG | + | chr8_1:85262293-85262312 | None:intergenic | 40.0% | |
| TTCCCTTATCCCTCATACTT+AGG | - | chr8_1:85262417-85262436 | Msa1221600:intron | 40.0% | |
| ! | GTTCGATGTGACTTGTATCT+TGG | - | chr8_1:85262471-85262490 | Msa1221600:CDS | 40.0% |
| AATTTGTGGAGTGACAAGGT+TGG | - | chr8_1:85262684-85262703 | Msa1221600:intron | 40.0% | |
| ACAAGGTTGGATAGATGGTT+TGG | - | chr8_1:85262697-85262716 | Msa1221600:intron | 40.0% | |
| CAAGGTTGGATAGATGGTTT+GGG | - | chr8_1:85262698-85262717 | Msa1221600:intron | 40.0% | |
| AAGGTTGGATAGATGGTTTG+GGG | - | chr8_1:85262699-85262718 | Msa1221600:intron | 40.0% | |
| ! | TCGTGCATTATAGGGCTTTT+TGG | - | chr8_1:85262863-85262882 | Msa1221600:intron | 40.0% |
| ! | CGTGCATTATAGGGCTTTTT+GGG | - | chr8_1:85262864-85262883 | Msa1221600:intron | 40.0% |
| ! | TTCTGGAGAAACCAGAAAGA+TGG | + | chr8_1:85262892-85262911 | None:intergenic | 40.0% |
| AGAAAGCGAGTCTAGAGAAT+GGG | - | chr8_1:85262908-85262927 | Msa1221600:CDS | 40.0% | |
| AAAAGAGAGCTGTCCGTTTA+AGG | - | chr8_1:85262933-85262952 | Msa1221600:CDS | 40.0% | |
| AAAGAGAGCTGTCCGTTTAA+GGG | - | chr8_1:85262934-85262953 | Msa1221600:CDS | 40.0% | |
| ATAGATGCAGAGGAAATGGA+GGG | - | chr8_1:85263096-85263115 | Msa1221600:intron | 40.0% | |
| ! | GAGTTGGGTATTTTGTACGT+GGG | - | chr8_1:85263118-85263137 | Msa1221600:intron | 40.0% |
| GCAGAAAAGTAACAACCTCT+AGG | + | chr8_1:85263171-85263190 | None:intergenic | 40.0% | |
| ! | TGCAGTTACTTTCCTGTATC+AGG | - | chr8_1:85263188-85263207 | Msa1221600:intron | 40.0% |
| CGTGGTATTTGGGAGATTAT+CGG | + | chr8_1:85263233-85263252 | None:intergenic | 40.0% | |
| CGATAATCTCCCAAATACCA+CGG | - | chr8_1:85263231-85263250 | Msa1221600:intron | 40.0% | |
| TGTTTATATTGCAGCTGGAG+CGG | - | chr8_1:85263423-85263442 | Msa1221600:CDS | 40.0% | |
| ! | GAGTGACTCTGTTTTCTGTA+AGG | - | chr8_1:85263461-85263480 | Msa1221600:CDS | 40.0% |
| !! | CAAGTTTTGTGGATGAGTTG+AGG | - | chr8_1:85263493-85263512 | Msa1221600:CDS | 40.0% |
| GGATTTCGTATTGTCGTCAC+CGG | - | chr8_1:85255735-85255754 | Msa1221600:CDS | 45.0% | |
| AGCAATTAGACTGGACTTGC+CGG | + | chr8_1:85255772-85255791 | None:intergenic | 45.0% | |
| GGCGAAAGTAGCAATTAGAC+TGG | + | chr8_1:85255781-85255800 | None:intergenic | 45.0% | |
| !! | CTAATTGCTACTTTCGCCGA+CGG | - | chr8_1:85255783-85255802 | Msa1221600:CDS | 45.0% |
| ! | ATCCTAGTGGGTAACAGTAC+AGG | + | chr8_1:85255831-85255850 | None:intergenic | 45.0% |
| CAGATGTTTAGGCATCCTAG+TGG | + | chr8_1:85255844-85255863 | None:intergenic | 45.0% | |
| ATTGTGATCGGTATGCCATC+GGG | + | chr8_1:85255870-85255889 | None:intergenic | 45.0% | |
| GATTGTGATCGGTATGCCAT+CGG | + | chr8_1:85255871-85255890 | None:intergenic | 45.0% | |
| !! | GAGGTGTCGATGATTGTGAT+CGG | + | chr8_1:85255882-85255901 | None:intergenic | 45.0% |
| AACAATTGCCACCACTGTTG+GGG | - | chr8_1:85256097-85256116 | Msa1221600:intron | 45.0% | |
| GCAACTTTATCTCTGTCCTC+GGG | + | chr8_1:85256225-85256244 | None:intergenic | 45.0% | |
| AGTTGCTGAACAAATACGGC+GGG | - | chr8_1:85256239-85256258 | Msa1221600:intron | 45.0% | |
| TCCTCACTTATGCATGCGAT+CGG | - | chr8_1:85256274-85256293 | Msa1221600:intron | 45.0% | |
| GTATTCTGCAAGAATGGGAG+GGG | - | chr8_1:85256510-85256529 | Msa1221600:intron | 45.0% | |
| CAGAGGATATGTACCCCTAT+AGG | + | chr8_1:85256826-85256845 | None:intergenic | 45.0% | |
| !! | ACAATATAACGGACCCGAAG+GGG | + | chr8_1:85256970-85256989 | None:intergenic | 45.0% |
| !! | GACAATATAACGGACCCGAA+GGG | + | chr8_1:85256971-85256990 | None:intergenic | 45.0% |
| ! | CTCTAACACCTCGATTTGTC+CGG | - | chr8_1:85257003-85257022 | Msa1221600:intron | 45.0% |
| ! | TCTAACACCTCGATTTGTCC+GGG | - | chr8_1:85257004-85257023 | Msa1221600:intron | 45.0% |
| ! | TTTAAAGCCCGGACAAATCG+AGG | + | chr8_1:85257014-85257033 | None:intergenic | 45.0% |
| CATCTAACCAGACCATCTAC+AGG | - | chr8_1:85257237-85257256 | Msa1221600:intron | 45.0% | |
| CCACTTTCATTCACACCTTC+TGG | + | chr8_1:85257334-85257353 | None:intergenic | 45.0% | |
| ! | CCAGAAGGTGTGAATGAAAG+TGG | - | chr8_1:85257331-85257350 | Msa1221600:intron | 45.0% |
| TTCTGTTTCGTGAGATACCG+TGG | - | chr8_1:85257401-85257420 | Msa1221600:intron | 45.0% | |
| CCACTTAGTGTGATAAGGCT+TGG | + | chr8_1:85258106-85258125 | None:intergenic | 45.0% | |
| ! | CCAAGCCTTATCACACTAAG+TGG | - | chr8_1:85258103-85258122 | Msa1221600:intron | 45.0% |
| CTTATCACACTAAGTGGGGT+CGG | - | chr8_1:85258109-85258128 | Msa1221600:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | - | chr8_1:85258284-85258303 | Msa1221600:intron | 45.0% | |
| ACACCATTAGAGAGAGAGTG+GGG | + | chr8_1:85258375-85258394 | None:intergenic | 45.0% | |
| GACACCATTAGAGAGAGAGT+GGG | + | chr8_1:85258376-85258395 | None:intergenic | 45.0% | |
| TGACACCATTAGAGAGAGAG+TGG | + | chr8_1:85258377-85258396 | None:intergenic | 45.0% | |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | + | chr8_1:85258447-85258466 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr8_1:85258494-85258513 | None:intergenic | 45.0% |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr8_1:85258495-85258514 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr8_1:85258499-85258518 | Msa1221600:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr8_1:85258503-85258522 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr8_1:85258570-85258589 | Msa1221600:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr8_1:85258589-85258608 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr8_1:85258603-85258622 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr8_1:85258612-85258631 | None:intergenic | 45.0% | |
| ATCTCCAACTTTCACCTCCA+AGG | - | chr8_1:85258711-85258730 | Msa1221600:intron | 45.0% | |
| TCTACCTTGGAGGTGAAAGT+TGG | + | chr8_1:85258718-85258737 | None:intergenic | 45.0% | |
| TAAATGGGAGGCTAAAGACC+TGG | + | chr8_1:85258828-85258847 | None:intergenic | 45.0% | |
| AGTCGAGGGAGGAGTTAAAT+GGG | + | chr8_1:85258843-85258862 | None:intergenic | 45.0% | |
| !! | GCTTCTTAACTTGTGCCCTT+AGG | - | chr8_1:85258977-85258996 | Msa1221600:intron | 45.0% |
| ! | CATGCTAACTTGTGCCCTAA+GGG | + | chr8_1:85258995-85259014 | None:intergenic | 45.0% |
| ! | TCATGCTAACTTGTGCCCTA+AGG | + | chr8_1:85258996-85259015 | None:intergenic | 45.0% |
| TCATCTGCAGCATCCTTGTA+GGG | + | chr8_1:85259129-85259148 | None:intergenic | 45.0% | |
| ! | GCAGATGAGAGTGCATTTAG+AGG | - | chr8_1:85259141-85259160 | Msa1221600:intron | 45.0% |
| CACACGTTCAACAAAATGCG+AGG | + | chr8_1:85259247-85259266 | None:intergenic | 45.0% | |
| GAACGTGTGTGTATGAACAC+TGG | - | chr8_1:85259258-85259277 | Msa1221600:intron | 45.0% | |
| !! | CAGCAGTTGATGGATCACTA+GGG | + | chr8_1:85259532-85259551 | None:intergenic | 45.0% |
| !! | ACAGCAGTTGATGGATCACT+AGG | + | chr8_1:85259533-85259552 | None:intergenic | 45.0% |
| TAGGCCCAAAAACAAAGCAC+TGG | + | chr8_1:85259616-85259635 | None:intergenic | 45.0% | |
| !!! | AGTGCTTTGTTTTTGGGCCT+AGG | - | chr8_1:85259615-85259634 | Msa1221600:intron | 45.0% |
| !!! | GTGCTTTGTTTTTGGGCCTA+GGG | - | chr8_1:85259616-85259635 | Msa1221600:intron | 45.0% |
| !!! | TGCTTTGTTTTTGGGCCTAG+GGG | - | chr8_1:85259617-85259636 | Msa1221600:intron | 45.0% |
| TCGTTCATGACAGGTGAACA+AGG | - | chr8_1:85260055-85260074 | Msa1221600:intron | 45.0% | |
| GCTCGTCATGGAGAAGATAA+TGG | - | chr8_1:85260355-85260374 | Msa1221600:intron | 45.0% | |
| GTTAACTCTTGTGTAGCCGT+TGG | + | chr8_1:85260433-85260452 | None:intergenic | 45.0% | |
| CGGCTACACAAGAGTTAACT+AGG | - | chr8_1:85260434-85260453 | Msa1221600:intron | 45.0% | |
| ATAGCCGTAAGCTGTACAAC+AGG | - | chr8_1:85260940-85260959 | Msa1221600:intron | 45.0% | |
| TGAGCCTGTTGTACAGCTTA+CGG | + | chr8_1:85260947-85260966 | None:intergenic | 45.0% | |
| ! | TTCTTTGAGGAGCTTAGCTC+CGG | + | chr8_1:85261204-85261223 | None:intergenic | 45.0% |
| CTCGAAACTCAACTCGAGTT+CGG | + | chr8_1:85262164-85262183 | None:intergenic | 45.0% | |
| GCAATTATGGTTAGTAGGGC+TGG | + | chr8_1:85262249-85262268 | None:intergenic | 45.0% | |
| ATGAGGGATAAGGGAACAAG+AGG | + | chr8_1:85262413-85262432 | None:intergenic | 45.0% | |
| ATCTTGAAGTGGTGTGTGAC+TGG | - | chr8_1:85262557-85262576 | Msa1221600:intron | 45.0% | |
| GAGTGACAAGGTTGGATAGA+TGG | - | chr8_1:85262692-85262711 | Msa1221600:intron | 45.0% | |
| ! | AGGTTGGATAGATGGTTTGG+GGG | - | chr8_1:85262700-85262719 | Msa1221600:intron | 45.0% |
| AGCCCTATAATGCACGAACT+TGG | + | chr8_1:85262860-85262879 | None:intergenic | 45.0% | |
| !!! | CTTTTTGGGTGCCATCTTTC+TGG | - | chr8_1:85262878-85262897 | Msa1221600:intron | 45.0% |
| CATTCTCTAGACTCGCTTTC+TGG | + | chr8_1:85262909-85262928 | None:intergenic | 45.0% | |
| CAGAAAGCGAGTCTAGAGAA+TGG | - | chr8_1:85262907-85262926 | Msa1221600:CDS | 45.0% | |
| GAAAGCGAGTCTAGAGAATG+GGG | - | chr8_1:85262909-85262928 | Msa1221600:CDS | 45.0% | |
| GATAGATGCAGAGGAAATGG+AGG | - | chr8_1:85263095-85263114 | Msa1221600:intron | 45.0% | |
| ! | GGAGTTGGGTATTTTGTACG+TGG | - | chr8_1:85263117-85263136 | Msa1221600:intron | 45.0% |
| TAAGGGAATGCACCTGATAC+AGG | + | chr8_1:85263203-85263222 | None:intergenic | 45.0% | |
| ! | GGAAGAATGCGCAAGTTTTG+TGG | - | chr8_1:85263482-85263501 | Msa1221600:CDS | 45.0% |
| AAATCCAGTTAGGGCACGTG+AGG | + | chr8_1:85255721-85255740 | None:intergenic | 50.0% | |
| ! | CTAGTGGGTAACAGTACAGG+CGG | + | chr8_1:85255828-85255847 | None:intergenic | 50.0% |
| CCATCGGGAGACAGATGTTT+AGG | + | chr8_1:85255855-85255874 | None:intergenic | 50.0% | |
| CCTAAACATCTGTCTCCCGA+TGG | - | chr8_1:85255852-85255871 | Msa1221600:intron | 50.0% | |
| CAATCATCGACACCTCTTCC+CGG | - | chr8_1:85255886-85255905 | Msa1221600:intron | 50.0% | |
| ! | GATTTTTGCCCCAACAGTGG+TGG | + | chr8_1:85256108-85256127 | None:intergenic | 50.0% |
| ! | CGTGATTTTTGCCCCAACAG+TGG | + | chr8_1:85256111-85256130 | None:intergenic | 50.0% |
| CTCCCACGTCTTCGAGATTT+GGG | - | chr8_1:85256330-85256349 | Msa1221600:intron | 50.0% | |
| TCCCACGTCTTCGAGATTTG+GGG | - | chr8_1:85256331-85256350 | Msa1221600:intron | 50.0% | |
| CTTAGAAAGGATGGCGCAAG+AGG | + | chr8_1:85256453-85256472 | None:intergenic | 50.0% | |
| TGCAAGAATGGGAGGGGATT+TGG | - | chr8_1:85256516-85256535 | Msa1221600:intron | 50.0% | |
| !! | CGACAATATAACGGACCCGA+AGG | + | chr8_1:85256972-85256991 | None:intergenic | 50.0% |
| TTGCGGGATAGATTCCCAGA+AGG | - | chr8_1:85257316-85257335 | Msa1221600:intron | 50.0% | |
| ! | TGTTTTCTACTGCCCCGGAA+AGG | - | chr8_1:85257877-85257896 | Msa1221600:intron | 50.0% |
| AGAAAGCAACCCACCTTTCC+GGG | + | chr8_1:85257893-85257912 | None:intergenic | 50.0% | |
| CAGAAAGCAACCCACCTTTC+CGG | + | chr8_1:85257894-85257913 | None:intergenic | 50.0% | |
| CGACCCCACTTAGTGTGATA+AGG | + | chr8_1:85258111-85258130 | None:intergenic | 50.0% | |
| TACCCCCACTCTCTCTCTAA+TGG | - | chr8_1:85258369-85258388 | Msa1221600:intron | 50.0% | |
| CACCATTAGAGAGAGAGTGG+GGG | + | chr8_1:85258374-85258393 | None:intergenic | 50.0% | |
| GTGGTAAGACCAGACAGGAT+AGG | + | chr8_1:85258408-85258427 | None:intergenic | 50.0% | |
| GATGAGTGGTAAGACCAGAC+AGG | + | chr8_1:85258413-85258432 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr8_1:85258508-85258527 | None:intergenic | 50.0% | |
| AAGGAGAAGTGGGTCTACCT+TGG | + | chr8_1:85258731-85258750 | None:intergenic | 50.0% | |
| ACTCCGTCTTGCTTCTACTC+CGG | - | chr8_1:85258773-85258792 | Msa1221600:intron | 50.0% | |
| ! | TAGAAGCGTATGGTTTCCGC+CGG | + | chr8_1:85258795-85258814 | None:intergenic | 50.0% |
| GCGGAAACCATACGCTTCTA+AGG | - | chr8_1:85258795-85258814 | Msa1221600:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+TGG | + | chr8_1:85258805-85258824 | None:intergenic | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+TGG | + | chr8_1:85258844-85258863 | None:intergenic | 50.0% | |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr8_1:85258857-85258876 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr8_1:85258858-85258877 | None:intergenic | 50.0% |
| ! | GCAGATGACGTAGTCTTGCT+TGG | + | chr8_1:85258868-85258887 | None:intergenic | 50.0% |
| CTCATCTGCAGCATCCTTGT+AGG | + | chr8_1:85259130-85259149 | None:intergenic | 50.0% | |
| AACTTCGCCTCCTAGTCACA+CGG | + | chr8_1:85259556-85259575 | None:intergenic | 50.0% | |
| !!! | GCTTTGTTTTTGGGCCTAGG+GGG | - | chr8_1:85259618-85259637 | Msa1221600:intron | 50.0% |
| !!! | CTTTGTTTTTGGGCCTAGGG+GGG | - | chr8_1:85259619-85259638 | Msa1221600:intron | 50.0% |
| AGATGGAGTTGGAGAGCTGT+TGG | - | chr8_1:85259993-85260012 | Msa1221600:intron | 50.0% | |
| TTCAGATGATGACCTCCACG+AGG | + | chr8_1:85260320-85260339 | None:intergenic | 50.0% | |
| TAGTCAGGACTTGGGAGTAG+AGG | - | chr8_1:85260659-85260678 | Msa1221600:intron | 50.0% | |
| GAGATGATTCCCAACTACCC+CGG | - | chr8_1:85261182-85261201 | Msa1221600:intron | 50.0% | |
| ! | TCTTTGAGGAGCTTAGCTCC+GGG | + | chr8_1:85261203-85261222 | None:intergenic | 50.0% |
| TCTTTGCCTAACCATAGGGC+TGG | - | chr8_1:85261237-85261256 | Msa1221600:intron | 50.0% | |
| TCATTGCCAGCCCTATGGTT+AGG | + | chr8_1:85261246-85261265 | None:intergenic | 50.0% | |
| ! | CGGCTCGACTCGATTAGAAT+TGG | + | chr8_1:85262192-85262211 | None:intergenic | 50.0% |
| CAGAGGAAATGGAGGGAGTT+GGG | - | chr8_1:85263103-85263122 | Msa1221600:intron | 50.0% | |
| ! | ACGTGGGTTGTTATGGAGAC+TGG | - | chr8_1:85263134-85263153 | Msa1221600:intron | 50.0% |
| ! | CGTGGGTTGTTATGGAGACT+GGG | - | chr8_1:85263135-85263154 | Msa1221600:intron | 50.0% |
| CTGGGCTCTCTAATTCCTAG+AGG | - | chr8_1:85263153-85263172 | Msa1221600:intron | 50.0% | |
| GATTCCTCACGTGCCCTAAC+TGG | - | chr8_1:85255714-85255733 | Msa1221600:CDS | 55.0% | |
| GTCCTTCACAGGGTTTCCGT+CGG | + | chr8_1:85255802-85255821 | None:intergenic | 55.0% | |
| CGCCTGTACTGTTACCCACT+AGG | - | chr8_1:85255826-85255845 | Msa1221600:intron | 55.0% | |
| TGTTGTTGCCTGTAGTCCCG+AGG | - | chr8_1:85256206-85256225 | Msa1221600:intron | 55.0% | |
| ATCTCTGTCCTCGGGACTAC+AGG | + | chr8_1:85256217-85256236 | None:intergenic | 55.0% | |
| GCCGATCGCATGCATAAGTG+AGG | + | chr8_1:85256278-85256297 | None:intergenic | 55.0% | |
| GCTCCCACGTCTTCGAGATT+TGG | - | chr8_1:85256329-85256348 | Msa1221600:intron | 55.0% | |
| CCCCCAAATCTCGAAGACGT+GGG | + | chr8_1:85256335-85256354 | None:intergenic | 55.0% | |
| CCCACGTCTTCGAGATTTGG+GGG | - | chr8_1:85256332-85256351 | Msa1221600:intron | 55.0% | |
| ACCCCCAAATCTCGAAGACG+TGG | + | chr8_1:85256336-85256355 | None:intergenic | 55.0% | |
| ACGTCTTCGAGATTTGGGGG+TGG | - | chr8_1:85256335-85256354 | Msa1221600:intron | 55.0% | |
| CGTCTTCGAGATTTGGGGGT+GGG | - | chr8_1:85256336-85256355 | Msa1221600:intron | 55.0% | |
| CATCTCTGTCACAGTCGCAG+TGG | + | chr8_1:85257049-85257068 | None:intergenic | 55.0% | |
| CACTGCGACTGTGACAGAGA+TGG | - | chr8_1:85257047-85257066 | Msa1221600:intron | 55.0% | |
| TTTCTACTGCCCCGGAAAGG+TGG | - | chr8_1:85257880-85257899 | Msa1221600:intron | 55.0% | |
| TTCTACTGCCCCGGAAAGGT+GGG | - | chr8_1:85257881-85257900 | Msa1221600:intron | 55.0% | |
| GAAAGCAACCCACCTTTCCG+GGG | + | chr8_1:85257892-85257911 | None:intergenic | 55.0% | |
| !! | CGGAAAGGTGGGTTGCTTTC+TGG | - | chr8_1:85257892-85257911 | Msa1221600:intron | 55.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr8_1:85258117-85258136 | Msa1221600:intron | 55.0% | |
| AGGATGTTGCGCTGGATGAG+TGG | + | chr8_1:85258427-85258446 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr8_1:85258521-85258540 | None:intergenic | 55.0% | |
| GAGAAGTGGGTCTACCTTGG+AGG | + | chr8_1:85258728-85258747 | None:intergenic | 55.0% | |
| ATGGGAGGCTAAAGACCTGG+AGG | + | chr8_1:85258825-85258844 | None:intergenic | 55.0% | |
| CGAGGGAGGAGTTAAATGGG+AGG | + | chr8_1:85258840-85258859 | None:intergenic | 55.0% | |
| TTGTAGGGAGCTCCGATCCA+GGG | + | chr8_1:85259114-85259133 | None:intergenic | 55.0% | |
| GTCACACGGACAGCAGTTGA+TGG | + | chr8_1:85259542-85259561 | None:intergenic | 55.0% | |
| CAACTGCTGTCCGTGTGACT+AGG | - | chr8_1:85259543-85259562 | Msa1221600:intron | 55.0% | |
| GTAGGTCTGATGAGTCCTCG+TGG | - | chr8_1:85260302-85260321 | Msa1221600:intron | 55.0% | |
| !! | TGAGGGCACTGCTCAGTTTC+AGG | + | chr8_1:85260825-85260844 | None:intergenic | 55.0% |
| !! | TGAGGGTGCTGCTCAGTTTC+AGG | + | chr8_1:85260858-85260877 | None:intergenic | 55.0% |
| AGCTTAGCTCCGGGGTAGTT+GGG | + | chr8_1:85261194-85261213 | None:intergenic | 55.0% | |
| ! | CTTTGAGGAGCTTAGCTCCG+GGG | + | chr8_1:85261202-85261221 | None:intergenic | 55.0% |
| TCGGTTCATTGCCAGCCCTA+TGG | + | chr8_1:85261251-85261270 | None:intergenic | 55.0% | |
| ! | GGCTCGTTTGGTTCACGAGT+TGG | - | chr8_1:85261406-85261425 | Msa1221600:intron | 55.0% |
| GAACCGAACCTGTCTGAGCT+CGG | + | chr8_1:85262212-85262231 | None:intergenic | 55.0% | |
| GCAGAGGAAATGGAGGGAGT+TGG | - | chr8_1:85263102-85263121 | Msa1221600:intron | 55.0% | |
| ATTGTCGTCACCGGCGACGA+AGG | - | chr8_1:85255744-85255763 | Msa1221600:CDS | 60.0% | |
| CGGAGATGAGGATGTTGCGC+TGG | + | chr8_1:85258435-85258454 | None:intergenic | 60.0% | |
| CCGCCGGAGTAGAAGCAAGA+CGG | + | chr8_1:85258779-85258798 | None:intergenic | 60.0% | |
| CCGTCTTGCTTCTACTCCGG+CGG | - | chr8_1:85258776-85258795 | Msa1221600:intron | 60.0% | |
| !! | CGCTTCTAAGGCTTGCCTCC+AGG | - | chr8_1:85258807-85258826 | Msa1221600:intron | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr8_1:85258854-85258873 | None:intergenic | 60.0% |
| CTTGTAGGGAGCTCCGATCC+AGG | + | chr8_1:85259115-85259134 | None:intergenic | 60.0% | |
| CTGGATCGGAGCTCCCTACA+AGG | - | chr8_1:85259113-85259132 | Msa1221600:intron | 60.0% | |
| CTGCTGTCCGTGTGACTAGG+AGG | - | chr8_1:85259546-85259565 | Msa1221600:intron | 60.0% | |
| ! | GCAGATTTTCCAGCCCCCCT+AGG | + | chr8_1:85259635-85259654 | None:intergenic | 60.0% |
| GGTCTGATGAGTCCTCGTGG+AGG | - | chr8_1:85260305-85260324 | Msa1221600:intron | 60.0% | |
| GAGCTTAGCTCCGGGGTAGT+TGG | + | chr8_1:85261195-85261214 | None:intergenic | 60.0% | |
| ! | GCAACTCGGCTCGACTCGTT+AGG | + | chr8_1:85262093-85262112 | None:intergenic | 60.0% |
| GAGCCGAGCTCAGACAGGTT+CGG | - | chr8_1:85262206-85262225 | Msa1221600:CDS | 60.0% | |
| GTCACCGGCGACGAAGGAAC+CGG | - | chr8_1:85255750-85255769 | Msa1221600:CDS | 65.0% | |
| !! | CTTGCCGGTTCCTTCGTCGC+CGG | + | chr8_1:85255757-85255776 | None:intergenic | 65.0% |
| CGCCGACGGAAACCCTGTGA+AGG | - | chr8_1:85255797-85255816 | Msa1221600:intron | 65.0% | |
| CAGGCGGCACGTCCTTCACA+GGG | + | chr8_1:85255812-85255831 | None:intergenic | 65.0% | |
| ACAGGCGGCACGTCCTTCAC+AGG | + | chr8_1:85255813-85255832 | None:intergenic | 65.0% | |
| !! | GTTTTTGGGCCTAGGGGGGC+TGG | - | chr8_1:85259623-85259642 | Msa1221600:intron | 65.0% |
| GAGTCGAGCCGAGCTCAGAC+AGG | - | chr8_1:85262201-85262220 | Msa1221600:CDS | 65.0% | |
| TGCAGCTGGAGCGGCAGCTG+CGG | - | chr8_1:85263432-85263451 | Msa1221600:CDS | 70.0% | |
| GGAGCGGCAGCTGCGGTAGT+TGG | - | chr8_1:85263439-85263458 | Msa1221600:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 85255705 | 85263545 | 85255705 | ID=Msa1221600;Name=Msa1221600 |
| chr8_1 | mRNA | 85255705 | 85263545 | 85255705 | ID=Msa1221600-mRNA-1;Parent=Msa1221600;Name=Msa1221600-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0|0|0.87|1|1|8|0|381 |
| chr8_1 | exon | 85263343 | 85263545 | 85263343 | ID=Msa1221600-mRNA-1:exon:30692;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85262897 | 85263029 | 85262897 | ID=Msa1221600-mRNA-1:exon:30691;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85262419 | 85262568 | 85262419 | ID=Msa1221600-mRNA-1:exon:30690;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85262147 | 85262323 | 85262147 | ID=Msa1221600-mRNA-1:exon:30689;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85261743 | 85261991 | 85261743 | ID=Msa1221600-mRNA-1:exon:30688;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85261542 | 85261610 | 85261542 | ID=Msa1221600-mRNA-1:exon:30687;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85261352 | 85261407 | 85261352 | ID=Msa1221600-mRNA-1:exon:30686;Parent=Msa1221600-mRNA-1 |
| chr8_1 | exon | 85255705 | 85255813 | 85255705 | ID=Msa1221600-mRNA-1:exon:30685;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85263343 | 85263545 | 85263343 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85262897 | 85263029 | 85262897 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85262419 | 85262568 | 85262419 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85262147 | 85262323 | 85262147 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85261743 | 85261991 | 85261743 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85261542 | 85261610 | 85261542 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85261352 | 85261407 | 85261352 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| chr8_1 | CDS | 85255705 | 85255813 | 85255705 | ID=Msa1221600-mRNA-1:cds;Parent=Msa1221600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
