Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221990 | KEH32598.1 | 70.674 | 341 | 98 | 1 | 5 | 345 | 13 | 351 | 3.71e-168 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221990 | sp|Q8RXF8|MIRO1_ARATH | 57.910 | 335 | 139 | 1 | 13 | 345 | 19 | 353 | 1.05e-127 | 384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221990 | G7JEA4 | 73.554 | 363 | 52 | 3 | 20 | 349 | 29 | 380 | 0.0 | 526 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0216580 | Msa1221990 | 0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa1221600 | Msa1221990 | 0.923542 | 2.314748e-89 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221990 | MtrunA17_Chr4g0073061 | 73.554 | 363 | 52 | 3 | 20 | 349 | 29 | 380 | 0.0 | 526 |
| Msa1221990 | MtrunA17_Chr4g0073381 | 69.966 | 293 | 86 | 1 | 53 | 345 | 1 | 291 | 1.03e-145 | 425 |
| Msa1221990 | MtrunA17_Chr1g0191811 | 58.309 | 343 | 142 | 1 | 8 | 349 | 13 | 355 | 3.35e-132 | 392 |
| Msa1221990 | MtrunA17_Chr5g0413741 | 52.707 | 351 | 140 | 3 | 6 | 348 | 49 | 381 | 1.36e-115 | 350 |
| Msa1221990 | MtrunA17_Chr5g0417151 | 55.556 | 279 | 123 | 1 | 73 | 350 | 40 | 318 | 6.81e-97 | 301 |
| Msa1221990 | MtrunA17_Chr7g0259771 | 47.774 | 337 | 175 | 1 | 10 | 345 | 7 | 343 | 2.45e-90 | 284 |
| Msa1221990 | MtrunA17_Chr1g0185591 | 41.124 | 338 | 198 | 1 | 9 | 345 | 10 | 347 | 7.22e-82 | 262 |
| Msa1221990 | MtrunA17_Chr5g0413461 | 58.462 | 130 | 53 | 1 | 222 | 350 | 4 | 133 | 2.43e-37 | 139 |
| Msa1221990 | MtrunA17_Chr8g0338031 | 33.000 | 300 | 161 | 8 | 11 | 290 | 33 | 312 | 6.63e-37 | 139 |
| Msa1221990 | MtrunA17_Chr5g0413781 | 68.889 | 45 | 13 | 1 | 305 | 348 | 12 | 56 | 4.85e-11 | 58.9 |
| Msa1221990 | MtrunA17_Chr1g0178861 | 40.777 | 103 | 58 | 2 | 7 | 108 | 156 | 256 | 6.41e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221990 | AT5G27540.1 | 57.910 | 335 | 139 | 1 | 13 | 345 | 19 | 353 | 1.07e-128 | 384 |
| Msa1221990 | AT5G27540.2 | 57.910 | 335 | 139 | 1 | 13 | 345 | 19 | 353 | 1.07e-128 | 384 |
| Msa1221990 | AT3G63150.1 | 46.667 | 345 | 183 | 1 | 2 | 345 | 5 | 349 | 9.43e-99 | 306 |
| Msa1221990 | AT3G05310.1 | 45.058 | 344 | 187 | 1 | 4 | 345 | 7 | 350 | 1.13e-90 | 285 |
| Msa1221990 | AT3G05310.3 | 42.927 | 205 | 115 | 1 | 143 | 345 | 1 | 205 | 2.50e-46 | 165 |
| Msa1221990 | AT3G05310.2 | 42.927 | 205 | 115 | 1 | 143 | 345 | 1 | 205 | 4.24e-46 | 164 |
Find 88 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAAAGGTGGGTTGCTTTC+TGG | 0.089580 | 8_1:+86085033 | Msa1221990:CDS |
| CCACTTTCATTCACACCTTC+TGG | 0.173968 | 8_1:-86084472 | None:intergenic |
| CTCCCACGTCTTCGAGATTT+GGG | 0.186448 | 8_1:+86083471 | Msa1221990:CDS |
| TTGAAAGTCTGAGTGCATTT+TGG | 0.229244 | 8_1:+86083448 | Msa1221990:CDS |
| CATTTAGTTCAGCAGCATTA+AGG | 0.258490 | 8_1:-86084214 | None:intergenic |
| CAGAAAGCAACCCACCTTTC+CGG | 0.265305 | 8_1:-86085032 | None:intergenic |
| GCTCCCACGTCTTCGAGATT+TGG | 0.267747 | 8_1:+86083470 | Msa1221990:CDS |
| CCAGAGGTTGAAATCAATAT+TGG | 0.274916 | 8_1:+86083925 | Msa1221990:CDS |
| AAACAATTCTTCAAGTTCTT+CGG | 0.305482 | 8_1:-86085000 | None:intergenic |
| AACAATTCTTCAAGTTCTTC+GGG | 0.306913 | 8_1:-86084999 | None:intergenic |
| AGAAAGCAACCCACCTTTCC+GGG | 0.321697 | 8_1:-86085031 | None:intergenic |
| CTTGCAAGCAGCAACTATAA+TGG | 0.324587 | 8_1:-86083833 | None:intergenic |
| TGGACTATGCTCAGAAAGTT+TGG | 0.345690 | 8_1:+86084562 | Msa1221990:CDS |
| GATTCCTCACGTGCCCTAAC+TGG | 0.348879 | 8_1:+86082852 | Msa1221990:CDS |
| AAGTCTGTTATTTCCCCTTC+GGG | 0.353776 | 8_1:+86084095 | Msa1221990:CDS |
| GTTCAGCATATACGCCTATA+GGG | 0.354233 | 8_1:+86083950 | Msa1221990:CDS |
| CAAATTAATCAGACATGAAA+TGG | 0.355881 | 8_1:-86085092 | None:intergenic |
| ACTTGCTGATCATCTAATTC+CGG | 0.372917 | 8_1:+86084603 | Msa1221990:CDS |
| TGTTCAGCATATACGCCTAT+AGG | 0.378264 | 8_1:+86083949 | Msa1221990:CDS |
| ATTTAGTTCAGCAGCATTAA+GGG | 0.382411 | 8_1:-86084213 | None:intergenic |
| CACTTTCATTCACACCTTCT+GGG | 0.382982 | 8_1:-86084471 | None:intergenic |
| AGCAATTAGACTGGACTTGC+CGG | 0.391959 | 8_1:-86082907 | None:intergenic |
| AAAGTCTGTTATTTCCCCTT+CGG | 0.397073 | 8_1:+86084094 | Msa1221990:CDS |
| CGACAATACGAAATCCAGTT+AGG | 0.402432 | 8_1:-86082866 | None:intergenic |
| CCATCGGGAGACAGATGTTT+AGG | 0.411126 | 8_1:-86082990 | None:intergenic |
| CCAATATTGATTTCAACCTC+TGG | 0.417641 | 8_1:-86083925 | None:intergenic |
| TTGCAAGCAGCAACTATAAT+GGG | 0.418917 | 8_1:-86083832 | None:intergenic |
| CAATCATCGACACCTCTTCC+CGG | 0.431668 | 8_1:+86083024 | Msa1221990:CDS |
| AATAGAAGATGCACCTGATC+AGG | 0.433238 | 8_1:-86084640 | None:intergenic |
| CTCTAACACCTCGATTTGTC+CGG | 0.433875 | 8_1:+86084144 | Msa1221990:CDS |
| AGATTCGCAATTCTAGATAG+TGG | 0.442408 | 8_1:-86084424 | None:intergenic |
| TCAGGATCACGTTTCAAATC+CGG | 0.451014 | 8_1:-86084622 | None:intergenic |
| AGCAACTTTATCTCTGTCCT+CGG | 0.454406 | 8_1:-86083364 | None:intergenic |
| CAGAGGATATGTACCCCTAT+AGG | 0.459633 | 8_1:-86083964 | None:intergenic |
| AAATCGAGGTGTTAGAGTCT+TGG | 0.477910 | 8_1:-86084138 | None:intergenic |
| TTTCTACTGCCCCGGAAAGG+TGG | 0.479346 | 8_1:+86085021 | Msa1221990:CDS |
| TTCTACTGCCCCGGAAAGGT+GGG | 0.482578 | 8_1:+86085022 | Msa1221990:CDS |
| CTAGAATTGCGAATCTAATG+AGG | 0.489491 | 8_1:+86084431 | Msa1221990:CDS |
| ATAAAGTTGCTGAACAAATA+CGG | 0.494680 | 8_1:+86083376 | Msa1221990:CDS |
| ACAGGCGGCACGTCCTTCAC+AGG | 0.495012 | 8_1:-86082948 | None:intergenic |
| TTTGAAACGTGATCCTGATC+AGG | 0.496812 | 8_1:+86084627 | Msa1221990:CDS |
| TTGGAATTTCGACAATATAA+CGG | 0.502635 | 8_1:-86084119 | None:intergenic |
| GTCACCGGCGACGAAGGAAC+CGG | 0.507330 | 8_1:+86082888 | Msa1221990:CDS |
| CAATATTGATTTCAACCTCT+GGG | 0.510726 | 8_1:-86083924 | None:intergenic |
| CCAGAAGGTGTGAATGAAAG+TGG | 0.512498 | 8_1:+86084472 | Msa1221990:CDS |
| CTTGCCGGTTCCTTCGTCGC+CGG | 0.516545 | 8_1:-86082892 | None:intergenic |
| ATTGTGATCGGTATGCCATC+GGG | 0.530462 | 8_1:-86083005 | None:intergenic |
| GCAACTTTATCTCTGTCCTC+GGG | 0.531408 | 8_1:-86083363 | None:intergenic |
| TGATAAACATTACCGGGAAG+AGG | 0.534334 | 8_1:-86083036 | None:intergenic |
| ATCCTAGTGGGTAACAGTAC+AGG | 0.545996 | 8_1:-86082966 | None:intergenic |
| TCCCACGTCTTCGAGATTTG+GGG | 0.548379 | 8_1:+86083472 | Msa1221990:CDS |
| CGCCTGTACTGTTACCCACT+AGG | 0.548473 | 8_1:+86082964 | Msa1221990:CDS |
| GACAATACGAAATCCAGTTA+GGG | 0.551548 | 8_1:-86082865 | None:intergenic |
| ACAATATAACGGACCCGAAG+GGG | 0.556593 | 8_1:-86084108 | None:intergenic |
| GGCGAAAGTAGCAATTAGAC+TGG | 0.557341 | 8_1:-86082916 | None:intergenic |
| TCTAACACCTCGATTTGTCC+GGG | 0.559553 | 8_1:+86084145 | Msa1221990:CDS |
| TCCTCACTTATGCATGCGAT+CGG | 0.562970 | 8_1:+86083415 | Msa1221990:CDS |
| GATTGTGATCGGTATGCCAT+CGG | 0.565745 | 8_1:-86083006 | None:intergenic |
| GACAATATAACGGACCCGAA+GGG | 0.569205 | 8_1:-86084109 | None:intergenic |
| TTCTGTTTCGTGAGATACCG+TGG | 0.574301 | 8_1:+86084542 | Msa1221990:CDS |
| CTAATTGCTACTTTCGCCGA+CGG | 0.576337 | 8_1:+86082921 | Msa1221990:CDS |
| GGATTTCGTATTGTCGTCAC+CGG | 0.578315 | 8_1:+86082873 | Msa1221990:CDS |
| CCCACGTCTTCGAGATTTGG+GGG | 0.582745 | 8_1:+86083473 | Msa1221990:CDS |
| AGTTGCTGAACAAATACGGC+GGG | 0.583032 | 8_1:+86083380 | Msa1221990:CDS |
| CGACAATATAACGGACCCGA+AGG | 0.602189 | 8_1:-86084110 | None:intergenic |
| GTCCTTCACAGGGTTTCCGT+CGG | 0.608633 | 8_1:-86082937 | None:intergenic |
| GCAATTCTAGATAGTGGCAT+CGG | 0.611836 | 8_1:-86084418 | None:intergenic |
| CAGGCGGCACGTCCTTCACA+GGG | 0.612651 | 8_1:-86082947 | None:intergenic |
| TTTAAAGCCCGGACAAATCG+AGG | 0.619965 | 8_1:-86084152 | None:intergenic |
| ATTGTCGTCACCGGCGACGA+AGG | 0.620712 | 8_1:+86082882 | Msa1221990:CDS |
| ATTAATCAGACATGAAATGG+AGG | 0.623379 | 8_1:-86085089 | None:intergenic |
| AAATCCAGTTAGGGCACGTG+AGG | 0.623472 | 8_1:-86082856 | None:intergenic |
| CGCCGACGGAAACCCTGTGA+AGG | 0.634478 | 8_1:+86082935 | Msa1221990:CDS |
| TTGCGGGATAGATTCCCAGA+AGG | 0.636017 | 8_1:+86084457 | Msa1221990:CDS |
| CCTAAACATCTGTCTCCCGA+TGG | 0.636457 | 8_1:+86082990 | Msa1221990:CDS |
| CACTGCGACTGTGACAGAGA+TGG | 0.638633 | 8_1:+86084188 | Msa1221990:CDS |
| GAAAGCAACCCACCTTTCCG+GGG | 0.639441 | 8_1:-86085030 | None:intergenic |
| TTCAGCATATACGCCTATAG+GGG | 0.643181 | 8_1:+86083951 | Msa1221990:CDS |
| GCCGATCGCATGCATAAGTG+AGG | 0.648345 | 8_1:-86083416 | None:intergenic |
| GAGGTGTCGATGATTGTGAT+CGG | 0.651795 | 8_1:-86083017 | None:intergenic |
| AACTTTCTGAGCATAGTCCA+CGG | 0.660031 | 8_1:-86084559 | None:intergenic |
| CATCTCTGTCACAGTCGCAG+TGG | 0.670123 | 8_1:-86084187 | None:intergenic |
| AGATGTTTAGGCATCCTAGT+GGG | 0.681946 | 8_1:-86082978 | None:intergenic |
| GAATATTCATGAAATCAATG+TGG | 0.692164 | 8_1:-86084522 | None:intergenic |
| CAGATGTTTAGGCATCCTAG+TGG | 0.700074 | 8_1:-86082979 | None:intergenic |
| TGTTGTTGCCTGTAGTCCCG+AGG | 0.706598 | 8_1:+86083347 | Msa1221990:intron |
| CTAGTGGGTAACAGTACAGG+CGG | 0.726173 | 8_1:-86082963 | None:intergenic |
| AAGTTGCTGAACAAATACGG+CGG | 0.736750 | 8_1:+86083379 | Msa1221990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGAGATAAATATATAAAA+CGG | + | chr8_1:86083619-86083638 | Msa1221990:intron | 10.0% |
| !! | TAAGAGATAAATATATAAAA+CGG | + | chr8_1:86083619-86083638 | Msa1221990:intron | 10.0% |
| !! | AAAAATATGATAAACATTAC+CGG | - | chr8_1:86083046-86083065 | None:intergenic | 15.0% |
| !!! | ATCAAAATAAAAATCGATTT+AGG | + | chr8_1:86083151-86083170 | Msa1221990:intron | 15.0% |
| !!! | TCAAAATAAAAATCGATTTA+GGG | + | chr8_1:86083152-86083171 | Msa1221990:intron | 15.0% |
| !! | ACATATAATATTTGAAAACA+GGG | - | chr8_1:86084011-86084030 | None:intergenic | 15.0% |
| !! | TACATATAATATTTGAAAAC+AGG | - | chr8_1:86084012-86084031 | None:intergenic | 15.0% |
| !! | AAAAATATGATAAACATTAC+CGG | - | chr8_1:86083046-86083065 | None:intergenic | 15.0% |
| !!! | ATCAAAATAAAAATCGATTT+AGG | + | chr8_1:86083151-86083170 | Msa1221990:intron | 15.0% |
| !!! | TCAAAATAAAAATCGATTTA+GGG | + | chr8_1:86083152-86083171 | Msa1221990:intron | 15.0% |
| !! | ACATATAATATTTGAAAACA+GGG | - | chr8_1:86084011-86084030 | None:intergenic | 15.0% |
| !! | TACATATAATATTTGAAAAC+AGG | - | chr8_1:86084012-86084031 | None:intergenic | 15.0% |
| !! | AAAATATGATAAACATTACC+GGG | - | chr8_1:86083045-86083064 | None:intergenic | 20.0% |
| !!! | CATAGTGGTATATTTAATTT+CGG | + | chr8_1:86083566-86083585 | Msa1221990:intron | 20.0% |
| !!! | CACTTTAATTTTCTTATTGA+AGG | + | chr8_1:86084046-86084065 | Msa1221990:intron | 20.0% |
| !!! | TTATTAGCTTATTTCATTGT+AGG | + | chr8_1:86084331-86084350 | Msa1221990:intron | 20.0% |
| !!! | ACTTAATCACATTTTTTCAT+TGG | + | chr8_1:86084956-86084975 | Msa1221990:intron | 20.0% |
| !! | AAAATATGATAAACATTACC+GGG | - | chr8_1:86083045-86083064 | None:intergenic | 20.0% |
| !!! | CATAGTGGTATATTTAATTT+CGG | + | chr8_1:86083566-86083585 | Msa1221990:intron | 20.0% |
| !!! | CACTTTAATTTTCTTATTGA+AGG | + | chr8_1:86084046-86084065 | Msa1221990:intron | 20.0% |
| !!! | TTATTAGCTTATTTCATTGT+AGG | + | chr8_1:86084331-86084350 | Msa1221990:intron | 20.0% |
| !!! | ACTTAATCACATTTTTTCAT+TGG | + | chr8_1:86084956-86084975 | Msa1221990:intron | 20.0% |
| ! | ATAAAGTTGCTGAACAAATA+CGG | + | chr8_1:86083376-86083395 | Msa1221990:CDS | 25.0% |
| ! | TTGCATCTAATCTTTATTAG+TGG | + | chr8_1:86083519-86083538 | Msa1221990:intron | 25.0% |
| ! | ATCTCTTATTACACTTAGAA+AGG | - | chr8_1:86083607-86083626 | None:intergenic | 25.0% |
| ! | TAATTAGTATTCTGCAAGAA+TGG | + | chr8_1:86083645-86083664 | Msa1221990:intron | 25.0% |
| ! | AATTAGTATTCTGCAAGAAT+GGG | + | chr8_1:86083646-86083665 | Msa1221990:intron | 25.0% |
| ! | TTATGTGAATGTGAATAATC+TGG | - | chr8_1:86083739-86083758 | None:intergenic | 25.0% |
| ! | ATGTATGCATTATCTGAAAA+TGG | - | chr8_1:86083775-86083794 | None:intergenic | 25.0% |
| ! | GTTATATGAACTTAATGAAC+AGG | + | chr8_1:86083801-86083820 | Msa1221990:intron | 25.0% |
| ! | TCTTGATTGTAATAATACAG+AGG | - | chr8_1:86083984-86084003 | None:intergenic | 25.0% |
| ! | TTGGAATTTCGACAATATAA+CGG | - | chr8_1:86084122-86084141 | None:intergenic | 25.0% |
| ! | ACGACTTTGATGTTTAATAT+GGG | - | chr8_1:86084264-86084283 | None:intergenic | 25.0% |
| ! | TACGACTTTGATGTTTAATA+TGG | - | chr8_1:86084265-86084284 | None:intergenic | 25.0% |
| ! | GAATATTCATGAAATCAATG+TGG | - | chr8_1:86084525-86084544 | None:intergenic | 25.0% |
| ! | TGAAAGAATTGATCTCAAAA+TGG | - | chr8_1:86084709-86084728 | None:intergenic | 25.0% |
| !! | TTTTCAGATATTTTCTCAAC+CGG | + | chr8_1:86084910-86084929 | Msa1221990:intron | 25.0% |
| !! | AAACAATTCTTCAAGTTCTT+CGG | - | chr8_1:86085003-86085022 | None:intergenic | 25.0% |
| ! | ATAAAGTTGCTGAACAAATA+CGG | + | chr8_1:86083376-86083395 | Msa1221990:CDS | 25.0% |
| ! | TTGCATCTAATCTTTATTAG+TGG | + | chr8_1:86083519-86083538 | Msa1221990:intron | 25.0% |
| ! | ATCTCTTATTACACTTAGAA+AGG | - | chr8_1:86083607-86083626 | None:intergenic | 25.0% |
| ! | TAATTAGTATTCTGCAAGAA+TGG | + | chr8_1:86083645-86083664 | Msa1221990:intron | 25.0% |
| ! | AATTAGTATTCTGCAAGAAT+GGG | + | chr8_1:86083646-86083665 | Msa1221990:intron | 25.0% |
| ! | TTATGTGAATGTGAATAATC+TGG | - | chr8_1:86083739-86083758 | None:intergenic | 25.0% |
| ! | ATGTATGCATTATCTGAAAA+TGG | - | chr8_1:86083775-86083794 | None:intergenic | 25.0% |
| ! | GTTATATGAACTTAATGAAC+AGG | + | chr8_1:86083801-86083820 | Msa1221990:intron | 25.0% |
| ! | TCTTGATTGTAATAATACAG+AGG | - | chr8_1:86083984-86084003 | None:intergenic | 25.0% |
| ! | TTGGAATTTCGACAATATAA+CGG | - | chr8_1:86084122-86084141 | None:intergenic | 25.0% |
| ! | ACGACTTTGATGTTTAATAT+GGG | - | chr8_1:86084264-86084283 | None:intergenic | 25.0% |
| ! | TACGACTTTGATGTTTAATA+TGG | - | chr8_1:86084265-86084284 | None:intergenic | 25.0% |
| ! | GAATATTCATGAAATCAATG+TGG | - | chr8_1:86084525-86084544 | None:intergenic | 25.0% |
| ! | TGAAAGAATTGATCTCAAAA+TGG | - | chr8_1:86084709-86084728 | None:intergenic | 25.0% |
| !! | TTTTCAGATATTTTCTCAAC+CGG | + | chr8_1:86084910-86084929 | Msa1221990:intron | 25.0% |
| !! | AAACAATTCTTCAAGTTCTT+CGG | - | chr8_1:86085003-86085022 | None:intergenic | 25.0% |
| ! | CATCACACTTAATGCAATTT+TGG | - | chr8_1:86083280-86083299 | None:intergenic | 30.0% |
| AAAGATTAGATGCAAAAGAG+AGG | - | chr8_1:86083514-86083533 | None:intergenic | 30.0% | |
| CATTGCATTTGTATTCATAG+TGG | + | chr8_1:86083551-86083570 | Msa1221990:intron | 30.0% | |
| CTTATTACACTTAGAAAGGA+TGG | - | chr8_1:86083603-86083622 | None:intergenic | 30.0% | |
| TACAAGCATGTTTGAACAAT+TGG | - | chr8_1:86083690-86083709 | None:intergenic | 30.0% | |
| !! | CAATATTGATTTCAACCTCT+GGG | - | chr8_1:86083927-86083946 | None:intergenic | 30.0% |
| ! | AATAACAGACTTTTGTGCAA+AGG | - | chr8_1:86084087-86084106 | None:intergenic | 30.0% |
| ! | ATTTAGTTCAGCAGCATTAA+GGG | - | chr8_1:86084216-86084235 | None:intergenic | 30.0% |
| ! | TGCTGAACTAAATGATTTTC+AGG | + | chr8_1:86084223-86084242 | Msa1221990:CDS | 30.0% |
| TGTTTAATATGGGAAGGAAA+AGG | - | chr8_1:86084254-86084273 | None:intergenic | 30.0% | |
| CTTTGATGTTTAATATGGGA+AGG | - | chr8_1:86084260-86084279 | None:intergenic | 30.0% | |
| AATATTAAAGATCGTGTGAG+CGG | - | chr8_1:86084862-86084881 | None:intergenic | 30.0% | |
| ATTTGTATATCACCATAAGC+CGG | - | chr8_1:86084932-86084951 | None:intergenic | 30.0% | |
| GCTTATGGTGATATACAAAT+TGG | + | chr8_1:86084932-86084951 | Msa1221990:intron | 30.0% | |
| !!! | TCACATTTTTTCATTGGTTC+AGG | + | chr8_1:86084962-86084981 | Msa1221990:intron | 30.0% |
| !!! | ATTTTTTCATTGGTTCAGGA+TGG | + | chr8_1:86084966-86084985 | Msa1221990:intron | 30.0% |
| !!! | TTTTTTCATTGGTTCAGGAT+GGG | + | chr8_1:86084967-86084986 | Msa1221990:intron | 30.0% |
| ! | AACAATTCTTCAAGTTCTTC+GGG | - | chr8_1:86085002-86085021 | None:intergenic | 30.0% |
| ! | CATCACACTTAATGCAATTT+TGG | - | chr8_1:86083280-86083299 | None:intergenic | 30.0% |
| AAAGATTAGATGCAAAAGAG+AGG | - | chr8_1:86083514-86083533 | None:intergenic | 30.0% | |
| CATTGCATTTGTATTCATAG+TGG | + | chr8_1:86083551-86083570 | Msa1221990:intron | 30.0% | |
| CTTATTACACTTAGAAAGGA+TGG | - | chr8_1:86083603-86083622 | None:intergenic | 30.0% | |
| TACAAGCATGTTTGAACAAT+TGG | - | chr8_1:86083690-86083709 | None:intergenic | 30.0% | |
| !! | CAATATTGATTTCAACCTCT+GGG | - | chr8_1:86083927-86083946 | None:intergenic | 30.0% |
| ! | AATAACAGACTTTTGTGCAA+AGG | - | chr8_1:86084087-86084106 | None:intergenic | 30.0% |
| ! | ATTTAGTTCAGCAGCATTAA+GGG | - | chr8_1:86084216-86084235 | None:intergenic | 30.0% |
| ! | TGCTGAACTAAATGATTTTC+AGG | + | chr8_1:86084223-86084242 | Msa1221990:CDS | 30.0% |
| TGTTTAATATGGGAAGGAAA+AGG | - | chr8_1:86084254-86084273 | None:intergenic | 30.0% | |
| CTTTGATGTTTAATATGGGA+AGG | - | chr8_1:86084260-86084279 | None:intergenic | 30.0% | |
| AATATTAAAGATCGTGTGAG+CGG | - | chr8_1:86084862-86084881 | None:intergenic | 30.0% | |
| ATTTGTATATCACCATAAGC+CGG | - | chr8_1:86084932-86084951 | None:intergenic | 30.0% | |
| GCTTATGGTGATATACAAAT+TGG | + | chr8_1:86084932-86084951 | Msa1221990:intron | 30.0% | |
| !!! | TCACATTTTTTCATTGGTTC+AGG | + | chr8_1:86084962-86084981 | Msa1221990:intron | 30.0% |
| !!! | ATTTTTTCATTGGTTCAGGA+TGG | + | chr8_1:86084966-86084985 | Msa1221990:intron | 30.0% |
| !!! | TTTTTTCATTGGTTCAGGAT+GGG | + | chr8_1:86084967-86084986 | Msa1221990:intron | 30.0% |
| ! | AACAATTCTTCAAGTTCTTC+GGG | - | chr8_1:86085002-86085021 | None:intergenic | 30.0% |
| GACAATACGAAATCCAGTTA+GGG | - | chr8_1:86082868-86082887 | None:intergenic | 35.0% | |
| AAGTTTAACTGCACCAAAAG+TGG | + | chr8_1:86083070-86083089 | Msa1221990:intron | 35.0% | |
| ! | TTGAAAGTCTGAGTGCATTT+TGG | + | chr8_1:86083448-86083467 | Msa1221990:CDS | 35.0% |
| TTGCAAGCAGCAACTATAAT+GGG | - | chr8_1:86083835-86083854 | None:intergenic | 35.0% | |
| !! | TCTGGGAATTTTTGGATTAC+TGG | - | chr8_1:86083910-86083929 | None:intergenic | 35.0% |
| AGTAATCCAAAAATTCCCAG+AGG | + | chr8_1:86083909-86083928 | Msa1221990:CDS | 35.0% | |
| !! | TTTCAACCTCTGGGAATTTT+TGG | - | chr8_1:86083918-86083937 | None:intergenic | 35.0% |
| !! | CCAATATTGATTTCAACCTC+TGG | - | chr8_1:86083928-86083947 | None:intergenic | 35.0% |
| CCAGAGGTTGAAATCAATAT+TGG | + | chr8_1:86083925-86083944 | Msa1221990:CDS | 35.0% | |
| !! | AAAGTCTGTTATTTCCCCTT+CGG | + | chr8_1:86084094-86084113 | Msa1221990:CDS | 35.0% |
| !! | TAAAAATGCGCTTTAAAGCC+CGG | - | chr8_1:86084166-86084185 | None:intergenic | 35.0% |
| ! | CATTTAGTTCAGCAGCATTA+AGG | - | chr8_1:86084217-86084236 | None:intergenic | 35.0% |
| AAGCTAATAATCAAGCGACA+GGG | - | chr8_1:86084321-86084340 | None:intergenic | 35.0% | |
| TAAGCTAATAATCAAGCGAC+AGG | - | chr8_1:86084322-86084341 | None:intergenic | 35.0% | |
| TATTTAACCTGTAGATGGTC+TGG | - | chr8_1:86084388-86084407 | None:intergenic | 35.0% | |
| CGACATATTTAACCTGTAGA+TGG | - | chr8_1:86084393-86084412 | None:intergenic | 35.0% | |
| AGATTCGCAATTCTAGATAG+TGG | - | chr8_1:86084427-86084446 | None:intergenic | 35.0% | |
| CTAGAATTGCGAATCTAATG+AGG | + | chr8_1:86084431-86084450 | Msa1221990:CDS | 35.0% | |
| ! | CGAATCTAATGAGGTTTTTG+CGG | + | chr8_1:86084440-86084459 | Msa1221990:CDS | 35.0% |
| ! | GAATCTAATGAGGTTTTTGC+GGG | + | chr8_1:86084441-86084460 | Msa1221990:CDS | 35.0% |
| ! | ACTTGCTGATCATCTAATTC+CGG | + | chr8_1:86084603-86084622 | Msa1221990:CDS | 35.0% |
| ATATTAAAGATCGTGTGAGC+GGG | - | chr8_1:86084861-86084880 | None:intergenic | 35.0% | |
| !! | ATATTTTCTCAACCGGCTTA+TGG | + | chr8_1:86084917-86084936 | Msa1221990:intron | 35.0% |
| GACAATACGAAATCCAGTTA+GGG | - | chr8_1:86082868-86082887 | None:intergenic | 35.0% | |
| AAGTTTAACTGCACCAAAAG+TGG | + | chr8_1:86083070-86083089 | Msa1221990:intron | 35.0% | |
| ! | TTGAAAGTCTGAGTGCATTT+TGG | + | chr8_1:86083448-86083467 | Msa1221990:CDS | 35.0% |
| TTGCAAGCAGCAACTATAAT+GGG | - | chr8_1:86083835-86083854 | None:intergenic | 35.0% | |
| !! | TCTGGGAATTTTTGGATTAC+TGG | - | chr8_1:86083910-86083929 | None:intergenic | 35.0% |
| AGTAATCCAAAAATTCCCAG+AGG | + | chr8_1:86083909-86083928 | Msa1221990:CDS | 35.0% | |
| !! | TTTCAACCTCTGGGAATTTT+TGG | - | chr8_1:86083918-86083937 | None:intergenic | 35.0% |
| !! | CCAATATTGATTTCAACCTC+TGG | - | chr8_1:86083928-86083947 | None:intergenic | 35.0% |
| CCAGAGGTTGAAATCAATAT+TGG | + | chr8_1:86083925-86083944 | Msa1221990:CDS | 35.0% | |
| !! | AAAGTCTGTTATTTCCCCTT+CGG | + | chr8_1:86084094-86084113 | Msa1221990:CDS | 35.0% |
| !! | TAAAAATGCGCTTTAAAGCC+CGG | - | chr8_1:86084166-86084185 | None:intergenic | 35.0% |
| ! | CATTTAGTTCAGCAGCATTA+AGG | - | chr8_1:86084217-86084236 | None:intergenic | 35.0% |
| AAGCTAATAATCAAGCGACA+GGG | - | chr8_1:86084321-86084340 | None:intergenic | 35.0% | |
| TAAGCTAATAATCAAGCGAC+AGG | - | chr8_1:86084322-86084341 | None:intergenic | 35.0% | |
| TATTTAACCTGTAGATGGTC+TGG | - | chr8_1:86084388-86084407 | None:intergenic | 35.0% | |
| CGACATATTTAACCTGTAGA+TGG | - | chr8_1:86084393-86084412 | None:intergenic | 35.0% | |
| AGATTCGCAATTCTAGATAG+TGG | - | chr8_1:86084427-86084446 | None:intergenic | 35.0% | |
| CTAGAATTGCGAATCTAATG+AGG | + | chr8_1:86084431-86084450 | Msa1221990:CDS | 35.0% | |
| ! | CGAATCTAATGAGGTTTTTG+CGG | + | chr8_1:86084440-86084459 | Msa1221990:CDS | 35.0% |
| ! | GAATCTAATGAGGTTTTTGC+GGG | + | chr8_1:86084441-86084460 | Msa1221990:CDS | 35.0% |
| ! | ACTTGCTGATCATCTAATTC+CGG | + | chr8_1:86084603-86084622 | Msa1221990:CDS | 35.0% |
| ATATTAAAGATCGTGTGAGC+GGG | - | chr8_1:86084861-86084880 | None:intergenic | 35.0% | |
| !! | ATATTTTCTCAACCGGCTTA+TGG | + | chr8_1:86084917-86084936 | Msa1221990:intron | 35.0% |
| CGACAATACGAAATCCAGTT+AGG | - | chr8_1:86082869-86082888 | None:intergenic | 40.0% | |
| AGATGTTTAGGCATCCTAGT+GGG | - | chr8_1:86082981-86083000 | None:intergenic | 40.0% | |
| TGATAAACATTACCGGGAAG+AGG | - | chr8_1:86083039-86083058 | None:intergenic | 40.0% | |
| !! | TATAGACAGATCGCCACTTT+TGG | - | chr8_1:86083086-86083105 | None:intergenic | 40.0% |
| CAAAACAGAAGCTGACAAAG+TGG | - | chr8_1:86083127-86083146 | None:intergenic | 40.0% | |
| TGCCATGTCAGCATGTTTAA+TGG | + | chr8_1:86083206-86083225 | Msa1221990:intron | 40.0% | |
| GCCATGTCAGCATGTTTAAT+GGG | + | chr8_1:86083207-86083226 | Msa1221990:intron | 40.0% | |
| TCCCATTAAACATGCTGACA+TGG | - | chr8_1:86083211-86083230 | None:intergenic | 40.0% | |
| TAAACAATTGCCACCACTGT+TGG | + | chr8_1:86083233-86083252 | Msa1221990:intron | 40.0% | |
| AAACAATTGCCACCACTGTT+GGG | + | chr8_1:86083234-86083253 | Msa1221990:intron | 40.0% | |
| AGCAACTTTATCTCTGTCCT+CGG | - | chr8_1:86083367-86083386 | None:intergenic | 40.0% | |
| AAGTTGCTGAACAAATACGG+CGG | + | chr8_1:86083379-86083398 | Msa1221990:CDS | 40.0% | |
| TAGTATTCTGCAAGAATGGG+AGG | + | chr8_1:86083649-86083668 | Msa1221990:intron | 40.0% | |
| AGTATTCTGCAAGAATGGGA+GGG | + | chr8_1:86083650-86083669 | Msa1221990:intron | 40.0% | |
| CTTGCAAGCAGCAACTATAA+TGG | - | chr8_1:86083836-86083855 | None:intergenic | 40.0% | |
| TGTTCAGCATATACGCCTAT+AGG | + | chr8_1:86083949-86083968 | Msa1221990:CDS | 40.0% | |
| GTTCAGCATATACGCCTATA+GGG | + | chr8_1:86083950-86083969 | Msa1221990:CDS | 40.0% | |
| TTCAGCATATACGCCTATAG+GGG | + | chr8_1:86083951-86083970 | Msa1221990:CDS | 40.0% | |
| !! | AAGTCTGTTATTTCCCCTTC+GGG | + | chr8_1:86084095-86084114 | Msa1221990:CDS | 40.0% |
| ! | AAATCGAGGTGTTAGAGTCT+TGG | - | chr8_1:86084141-86084160 | None:intergenic | 40.0% |
| ! | GCAATTCTAGATAGTGGCAT+CGG | - | chr8_1:86084421-86084440 | None:intergenic | 40.0% |
| CACTTTCATTCACACCTTCT+GGG | - | chr8_1:86084474-86084493 | None:intergenic | 40.0% | |
| !! | GAAAGTGGACTTACTTTTGC+AGG | + | chr8_1:86084487-86084506 | Msa1221990:CDS | 40.0% |
| AACTTTCTGAGCATAGTCCA+CGG | - | chr8_1:86084562-86084581 | None:intergenic | 40.0% | |
| TGGACTATGCTCAGAAAGTT+TGG | + | chr8_1:86084562-86084581 | Msa1221990:CDS | 40.0% | |
| TCAGGATCACGTTTCAAATC+CGG | - | chr8_1:86084625-86084644 | None:intergenic | 40.0% | |
| ! | TTTGAAACGTGATCCTGATC+AGG | + | chr8_1:86084627-86084646 | Msa1221990:CDS | 40.0% |
| AATAGAAGATGCACCTGATC+AGG | - | chr8_1:86084643-86084662 | None:intergenic | 40.0% | |
| ! | AGAATTGTTTTCTACTGCCC+CGG | + | chr8_1:86085013-86085032 | Msa1221990:CDS | 40.0% |
| CGACAATACGAAATCCAGTT+AGG | - | chr8_1:86082869-86082888 | None:intergenic | 40.0% | |
| AGATGTTTAGGCATCCTAGT+GGG | - | chr8_1:86082981-86083000 | None:intergenic | 40.0% | |
| TGATAAACATTACCGGGAAG+AGG | - | chr8_1:86083039-86083058 | None:intergenic | 40.0% | |
| !! | TATAGACAGATCGCCACTTT+TGG | - | chr8_1:86083086-86083105 | None:intergenic | 40.0% |
| CAAAACAGAAGCTGACAAAG+TGG | - | chr8_1:86083127-86083146 | None:intergenic | 40.0% | |
| TGCCATGTCAGCATGTTTAA+TGG | + | chr8_1:86083206-86083225 | Msa1221990:intron | 40.0% | |
| GCCATGTCAGCATGTTTAAT+GGG | + | chr8_1:86083207-86083226 | Msa1221990:intron | 40.0% | |
| TCCCATTAAACATGCTGACA+TGG | - | chr8_1:86083211-86083230 | None:intergenic | 40.0% | |
| TAAACAATTGCCACCACTGT+TGG | + | chr8_1:86083233-86083252 | Msa1221990:intron | 40.0% | |
| AAACAATTGCCACCACTGTT+GGG | + | chr8_1:86083234-86083253 | Msa1221990:intron | 40.0% | |
| AGCAACTTTATCTCTGTCCT+CGG | - | chr8_1:86083367-86083386 | None:intergenic | 40.0% | |
| AAGTTGCTGAACAAATACGG+CGG | + | chr8_1:86083379-86083398 | Msa1221990:CDS | 40.0% | |
| TAGTATTCTGCAAGAATGGG+AGG | + | chr8_1:86083649-86083668 | Msa1221990:intron | 40.0% | |
| AGTATTCTGCAAGAATGGGA+GGG | + | chr8_1:86083650-86083669 | Msa1221990:intron | 40.0% | |
| CTTGCAAGCAGCAACTATAA+TGG | - | chr8_1:86083836-86083855 | None:intergenic | 40.0% | |
| TGTTCAGCATATACGCCTAT+AGG | + | chr8_1:86083949-86083968 | Msa1221990:CDS | 40.0% | |
| GTTCAGCATATACGCCTATA+GGG | + | chr8_1:86083950-86083969 | Msa1221990:CDS | 40.0% | |
| TTCAGCATATACGCCTATAG+GGG | + | chr8_1:86083951-86083970 | Msa1221990:CDS | 40.0% | |
| !! | AAGTCTGTTATTTCCCCTTC+GGG | + | chr8_1:86084095-86084114 | Msa1221990:CDS | 40.0% |
| ! | AAATCGAGGTGTTAGAGTCT+TGG | - | chr8_1:86084141-86084160 | None:intergenic | 40.0% |
| ! | GCAATTCTAGATAGTGGCAT+CGG | - | chr8_1:86084421-86084440 | None:intergenic | 40.0% |
| CACTTTCATTCACACCTTCT+GGG | - | chr8_1:86084474-86084493 | None:intergenic | 40.0% | |
| !! | GAAAGTGGACTTACTTTTGC+AGG | + | chr8_1:86084487-86084506 | Msa1221990:CDS | 40.0% |
| AACTTTCTGAGCATAGTCCA+CGG | - | chr8_1:86084562-86084581 | None:intergenic | 40.0% | |
| TGGACTATGCTCAGAAAGTT+TGG | + | chr8_1:86084562-86084581 | Msa1221990:CDS | 40.0% | |
| TCAGGATCACGTTTCAAATC+CGG | - | chr8_1:86084625-86084644 | None:intergenic | 40.0% | |
| ! | TTTGAAACGTGATCCTGATC+AGG | + | chr8_1:86084627-86084646 | Msa1221990:CDS | 40.0% |
| AATAGAAGATGCACCTGATC+AGG | - | chr8_1:86084643-86084662 | None:intergenic | 40.0% | |
| ! | AGAATTGTTTTCTACTGCCC+CGG | + | chr8_1:86085013-86085032 | Msa1221990:CDS | 40.0% |
| GGATTTCGTATTGTCGTCAC+CGG | + | chr8_1:86082873-86082892 | Msa1221990:CDS | 45.0% | |
| AGCAATTAGACTGGACTTGC+CGG | - | chr8_1:86082910-86082929 | None:intergenic | 45.0% | |
| GGCGAAAGTAGCAATTAGAC+TGG | - | chr8_1:86082919-86082938 | None:intergenic | 45.0% | |
| !! | CTAATTGCTACTTTCGCCGA+CGG | + | chr8_1:86082921-86082940 | Msa1221990:CDS | 45.0% |
| ! | ATCCTAGTGGGTAACAGTAC+AGG | - | chr8_1:86082969-86082988 | None:intergenic | 45.0% |
| CAGATGTTTAGGCATCCTAG+TGG | - | chr8_1:86082982-86083001 | None:intergenic | 45.0% | |
| ATTGTGATCGGTATGCCATC+GGG | - | chr8_1:86083008-86083027 | None:intergenic | 45.0% | |
| GATTGTGATCGGTATGCCAT+CGG | - | chr8_1:86083009-86083028 | None:intergenic | 45.0% | |
| !! | GAGGTGTCGATGATTGTGAT+CGG | - | chr8_1:86083020-86083039 | None:intergenic | 45.0% |
| AACAATTGCCACCACTGTTG+GGG | + | chr8_1:86083235-86083254 | Msa1221990:intron | 45.0% | |
| GCAACTTTATCTCTGTCCTC+GGG | - | chr8_1:86083366-86083385 | None:intergenic | 45.0% | |
| AGTTGCTGAACAAATACGGC+GGG | + | chr8_1:86083380-86083399 | Msa1221990:CDS | 45.0% | |
| TCCTCACTTATGCATGCGAT+CGG | + | chr8_1:86083415-86083434 | Msa1221990:CDS | 45.0% | |
| GTATTCTGCAAGAATGGGAG+GGG | + | chr8_1:86083651-86083670 | Msa1221990:intron | 45.0% | |
| CAGAGGATATGTACCCCTAT+AGG | - | chr8_1:86083967-86083986 | None:intergenic | 45.0% | |
| !! | ACAATATAACGGACCCGAAG+GGG | - | chr8_1:86084111-86084130 | None:intergenic | 45.0% |
| !! | GACAATATAACGGACCCGAA+GGG | - | chr8_1:86084112-86084131 | None:intergenic | 45.0% |
| ! | CTCTAACACCTCGATTTGTC+CGG | + | chr8_1:86084144-86084163 | Msa1221990:CDS | 45.0% |
| ! | TCTAACACCTCGATTTGTCC+GGG | + | chr8_1:86084145-86084164 | Msa1221990:CDS | 45.0% |
| ! | TTTAAAGCCCGGACAAATCG+AGG | - | chr8_1:86084155-86084174 | None:intergenic | 45.0% |
| CATCTAACCAGACCATCTAC+AGG | + | chr8_1:86084378-86084397 | Msa1221990:intron | 45.0% | |
| CCACTTTCATTCACACCTTC+TGG | - | chr8_1:86084475-86084494 | None:intergenic | 45.0% | |
| ! | CCAGAAGGTGTGAATGAAAG+TGG | + | chr8_1:86084472-86084491 | Msa1221990:CDS | 45.0% |
| TTCTGTTTCGTGAGATACCG+TGG | + | chr8_1:86084542-86084561 | Msa1221990:CDS | 45.0% | |
| GGATTTCGTATTGTCGTCAC+CGG | + | chr8_1:86082873-86082892 | Msa1221990:CDS | 45.0% | |
| AGCAATTAGACTGGACTTGC+CGG | - | chr8_1:86082910-86082929 | None:intergenic | 45.0% | |
| GGCGAAAGTAGCAATTAGAC+TGG | - | chr8_1:86082919-86082938 | None:intergenic | 45.0% | |
| !! | CTAATTGCTACTTTCGCCGA+CGG | + | chr8_1:86082921-86082940 | Msa1221990:CDS | 45.0% |
| ! | ATCCTAGTGGGTAACAGTAC+AGG | - | chr8_1:86082969-86082988 | None:intergenic | 45.0% |
| CAGATGTTTAGGCATCCTAG+TGG | - | chr8_1:86082982-86083001 | None:intergenic | 45.0% | |
| ATTGTGATCGGTATGCCATC+GGG | - | chr8_1:86083008-86083027 | None:intergenic | 45.0% | |
| GATTGTGATCGGTATGCCAT+CGG | - | chr8_1:86083009-86083028 | None:intergenic | 45.0% | |
| !! | GAGGTGTCGATGATTGTGAT+CGG | - | chr8_1:86083020-86083039 | None:intergenic | 45.0% |
| AACAATTGCCACCACTGTTG+GGG | + | chr8_1:86083235-86083254 | Msa1221990:intron | 45.0% | |
| GCAACTTTATCTCTGTCCTC+GGG | - | chr8_1:86083366-86083385 | None:intergenic | 45.0% | |
| AGTTGCTGAACAAATACGGC+GGG | + | chr8_1:86083380-86083399 | Msa1221990:CDS | 45.0% | |
| TCCTCACTTATGCATGCGAT+CGG | + | chr8_1:86083415-86083434 | Msa1221990:CDS | 45.0% | |
| GTATTCTGCAAGAATGGGAG+GGG | + | chr8_1:86083651-86083670 | Msa1221990:intron | 45.0% | |
| CAGAGGATATGTACCCCTAT+AGG | - | chr8_1:86083967-86083986 | None:intergenic | 45.0% | |
| !! | ACAATATAACGGACCCGAAG+GGG | - | chr8_1:86084111-86084130 | None:intergenic | 45.0% |
| !! | GACAATATAACGGACCCGAA+GGG | - | chr8_1:86084112-86084131 | None:intergenic | 45.0% |
| ! | CTCTAACACCTCGATTTGTC+CGG | + | chr8_1:86084144-86084163 | Msa1221990:CDS | 45.0% |
| ! | TCTAACACCTCGATTTGTCC+GGG | + | chr8_1:86084145-86084164 | Msa1221990:CDS | 45.0% |
| ! | TTTAAAGCCCGGACAAATCG+AGG | - | chr8_1:86084155-86084174 | None:intergenic | 45.0% |
| CATCTAACCAGACCATCTAC+AGG | + | chr8_1:86084378-86084397 | Msa1221990:intron | 45.0% | |
| CCACTTTCATTCACACCTTC+TGG | - | chr8_1:86084475-86084494 | None:intergenic | 45.0% | |
| ! | CCAGAAGGTGTGAATGAAAG+TGG | + | chr8_1:86084472-86084491 | Msa1221990:CDS | 45.0% |
| TTCTGTTTCGTGAGATACCG+TGG | + | chr8_1:86084542-86084561 | Msa1221990:CDS | 45.0% | |
| AAATCCAGTTAGGGCACGTG+AGG | - | chr8_1:86082859-86082878 | None:intergenic | 50.0% | |
| ! | CTAGTGGGTAACAGTACAGG+CGG | - | chr8_1:86082966-86082985 | None:intergenic | 50.0% |
| CCATCGGGAGACAGATGTTT+AGG | - | chr8_1:86082993-86083012 | None:intergenic | 50.0% | |
| CCTAAACATCTGTCTCCCGA+TGG | + | chr8_1:86082990-86083009 | Msa1221990:CDS | 50.0% | |
| CAATCATCGACACCTCTTCC+CGG | + | chr8_1:86083024-86083043 | Msa1221990:CDS | 50.0% | |
| ! | GATTTTTGCCCCAACAGTGG+TGG | - | chr8_1:86083246-86083265 | None:intergenic | 50.0% |
| ! | CGTGATTTTTGCCCCAACAG+TGG | - | chr8_1:86083249-86083268 | None:intergenic | 50.0% |
| CTCCCACGTCTTCGAGATTT+GGG | + | chr8_1:86083471-86083490 | Msa1221990:CDS | 50.0% | |
| TCCCACGTCTTCGAGATTTG+GGG | + | chr8_1:86083472-86083491 | Msa1221990:CDS | 50.0% | |
| CTTAGAAAGGATGGCGCAAG+AGG | - | chr8_1:86083594-86083613 | None:intergenic | 50.0% | |
| TGCAAGAATGGGAGGGGATT+TGG | + | chr8_1:86083657-86083676 | Msa1221990:intron | 50.0% | |
| !! | CGACAATATAACGGACCCGA+AGG | - | chr8_1:86084113-86084132 | None:intergenic | 50.0% |
| TTGCGGGATAGATTCCCAGA+AGG | + | chr8_1:86084457-86084476 | Msa1221990:CDS | 50.0% | |
| ! | TGTTTTCTACTGCCCCGGAA+AGG | + | chr8_1:86085018-86085037 | Msa1221990:CDS | 50.0% |
| AGAAAGCAACCCACCTTTCC+GGG | - | chr8_1:86085034-86085053 | None:intergenic | 50.0% | |
| CAGAAAGCAACCCACCTTTC+CGG | - | chr8_1:86085035-86085054 | None:intergenic | 50.0% | |
| AAATCCAGTTAGGGCACGTG+AGG | - | chr8_1:86082859-86082878 | None:intergenic | 50.0% | |
| ! | CTAGTGGGTAACAGTACAGG+CGG | - | chr8_1:86082966-86082985 | None:intergenic | 50.0% |
| CCATCGGGAGACAGATGTTT+AGG | - | chr8_1:86082993-86083012 | None:intergenic | 50.0% | |
| CCTAAACATCTGTCTCCCGA+TGG | + | chr8_1:86082990-86083009 | Msa1221990:CDS | 50.0% | |
| CAATCATCGACACCTCTTCC+CGG | + | chr8_1:86083024-86083043 | Msa1221990:CDS | 50.0% | |
| ! | GATTTTTGCCCCAACAGTGG+TGG | - | chr8_1:86083246-86083265 | None:intergenic | 50.0% |
| ! | CGTGATTTTTGCCCCAACAG+TGG | - | chr8_1:86083249-86083268 | None:intergenic | 50.0% |
| CTCCCACGTCTTCGAGATTT+GGG | + | chr8_1:86083471-86083490 | Msa1221990:CDS | 50.0% | |
| TCCCACGTCTTCGAGATTTG+GGG | + | chr8_1:86083472-86083491 | Msa1221990:CDS | 50.0% | |
| CTTAGAAAGGATGGCGCAAG+AGG | - | chr8_1:86083594-86083613 | None:intergenic | 50.0% | |
| TGCAAGAATGGGAGGGGATT+TGG | + | chr8_1:86083657-86083676 | Msa1221990:intron | 50.0% | |
| !! | CGACAATATAACGGACCCGA+AGG | - | chr8_1:86084113-86084132 | None:intergenic | 50.0% |
| TTGCGGGATAGATTCCCAGA+AGG | + | chr8_1:86084457-86084476 | Msa1221990:CDS | 50.0% | |
| ! | TGTTTTCTACTGCCCCGGAA+AGG | + | chr8_1:86085018-86085037 | Msa1221990:CDS | 50.0% |
| AGAAAGCAACCCACCTTTCC+GGG | - | chr8_1:86085034-86085053 | None:intergenic | 50.0% | |
| CAGAAAGCAACCCACCTTTC+CGG | - | chr8_1:86085035-86085054 | None:intergenic | 50.0% | |
| GATTCCTCACGTGCCCTAAC+TGG | + | chr8_1:86082852-86082871 | Msa1221990:CDS | 55.0% | |
| GTCCTTCACAGGGTTTCCGT+CGG | - | chr8_1:86082940-86082959 | None:intergenic | 55.0% | |
| CGCCTGTACTGTTACCCACT+AGG | + | chr8_1:86082964-86082983 | Msa1221990:CDS | 55.0% | |
| TGTTGTTGCCTGTAGTCCCG+AGG | + | chr8_1:86083347-86083366 | Msa1221990:intron | 55.0% | |
| ATCTCTGTCCTCGGGACTAC+AGG | - | chr8_1:86083358-86083377 | None:intergenic | 55.0% | |
| GCCGATCGCATGCATAAGTG+AGG | - | chr8_1:86083419-86083438 | None:intergenic | 55.0% | |
| GCTCCCACGTCTTCGAGATT+TGG | + | chr8_1:86083470-86083489 | Msa1221990:CDS | 55.0% | |
| CCCCCAAATCTCGAAGACGT+GGG | - | chr8_1:86083476-86083495 | None:intergenic | 55.0% | |
| CCCACGTCTTCGAGATTTGG+GGG | + | chr8_1:86083473-86083492 | Msa1221990:CDS | 55.0% | |
| ACCCCCAAATCTCGAAGACG+TGG | - | chr8_1:86083477-86083496 | None:intergenic | 55.0% | |
| ACGTCTTCGAGATTTGGGGG+TGG | + | chr8_1:86083476-86083495 | Msa1221990:intron | 55.0% | |
| CGTCTTCGAGATTTGGGGGT+GGG | + | chr8_1:86083477-86083496 | Msa1221990:intron | 55.0% | |
| CATCTCTGTCACAGTCGCAG+TGG | - | chr8_1:86084190-86084209 | None:intergenic | 55.0% | |
| CACTGCGACTGTGACAGAGA+TGG | + | chr8_1:86084188-86084207 | Msa1221990:CDS | 55.0% | |
| TTTCTACTGCCCCGGAAAGG+TGG | + | chr8_1:86085021-86085040 | Msa1221990:CDS | 55.0% | |
| TTCTACTGCCCCGGAAAGGT+GGG | + | chr8_1:86085022-86085041 | Msa1221990:CDS | 55.0% | |
| GAAAGCAACCCACCTTTCCG+GGG | - | chr8_1:86085033-86085052 | None:intergenic | 55.0% | |
| !! | CGGAAAGGTGGGTTGCTTTC+TGG | + | chr8_1:86085033-86085052 | Msa1221990:CDS | 55.0% |
| GATTCCTCACGTGCCCTAAC+TGG | + | chr8_1:86082852-86082871 | Msa1221990:CDS | 55.0% | |
| GTCCTTCACAGGGTTTCCGT+CGG | - | chr8_1:86082940-86082959 | None:intergenic | 55.0% | |
| CGCCTGTACTGTTACCCACT+AGG | + | chr8_1:86082964-86082983 | Msa1221990:CDS | 55.0% | |
| TGTTGTTGCCTGTAGTCCCG+AGG | + | chr8_1:86083347-86083366 | Msa1221990:intron | 55.0% | |
| ATCTCTGTCCTCGGGACTAC+AGG | - | chr8_1:86083358-86083377 | None:intergenic | 55.0% | |
| GCCGATCGCATGCATAAGTG+AGG | - | chr8_1:86083419-86083438 | None:intergenic | 55.0% | |
| GCTCCCACGTCTTCGAGATT+TGG | + | chr8_1:86083470-86083489 | Msa1221990:CDS | 55.0% | |
| CCCCCAAATCTCGAAGACGT+GGG | - | chr8_1:86083476-86083495 | None:intergenic | 55.0% | |
| CCCACGTCTTCGAGATTTGG+GGG | + | chr8_1:86083473-86083492 | Msa1221990:CDS | 55.0% | |
| ACCCCCAAATCTCGAAGACG+TGG | - | chr8_1:86083477-86083496 | None:intergenic | 55.0% | |
| ACGTCTTCGAGATTTGGGGG+TGG | + | chr8_1:86083476-86083495 | Msa1221990:intron | 55.0% | |
| CGTCTTCGAGATTTGGGGGT+GGG | + | chr8_1:86083477-86083496 | Msa1221990:intron | 55.0% | |
| CATCTCTGTCACAGTCGCAG+TGG | - | chr8_1:86084190-86084209 | None:intergenic | 55.0% | |
| CACTGCGACTGTGACAGAGA+TGG | + | chr8_1:86084188-86084207 | Msa1221990:CDS | 55.0% | |
| TTTCTACTGCCCCGGAAAGG+TGG | + | chr8_1:86085021-86085040 | Msa1221990:CDS | 55.0% | |
| TTCTACTGCCCCGGAAAGGT+GGG | + | chr8_1:86085022-86085041 | Msa1221990:CDS | 55.0% | |
| GAAAGCAACCCACCTTTCCG+GGG | - | chr8_1:86085033-86085052 | None:intergenic | 55.0% | |
| !! | CGGAAAGGTGGGTTGCTTTC+TGG | + | chr8_1:86085033-86085052 | Msa1221990:CDS | 55.0% |
| ATTGTCGTCACCGGCGACGA+AGG | + | chr8_1:86082882-86082901 | Msa1221990:CDS | 60.0% | |
| ATTGTCGTCACCGGCGACGA+AGG | + | chr8_1:86082882-86082901 | Msa1221990:CDS | 60.0% | |
| GTCACCGGCGACGAAGGAAC+CGG | + | chr8_1:86082888-86082907 | Msa1221990:CDS | 65.0% | |
| !! | CTTGCCGGTTCCTTCGTCGC+CGG | - | chr8_1:86082895-86082914 | None:intergenic | 65.0% |
| CGCCGACGGAAACCCTGTGA+AGG | + | chr8_1:86082935-86082954 | Msa1221990:CDS | 65.0% | |
| CAGGCGGCACGTCCTTCACA+GGG | - | chr8_1:86082950-86082969 | None:intergenic | 65.0% | |
| ACAGGCGGCACGTCCTTCAC+AGG | - | chr8_1:86082951-86082970 | None:intergenic | 65.0% | |
| GTCACCGGCGACGAAGGAAC+CGG | + | chr8_1:86082888-86082907 | Msa1221990:CDS | 65.0% | |
| !! | CTTGCCGGTTCCTTCGTCGC+CGG | - | chr8_1:86082895-86082914 | None:intergenic | 65.0% |
| CGCCGACGGAAACCCTGTGA+AGG | + | chr8_1:86082935-86082954 | Msa1221990:CDS | 65.0% | |
| CAGGCGGCACGTCCTTCACA+GGG | - | chr8_1:86082950-86082969 | None:intergenic | 65.0% | |
| ACAGGCGGCACGTCCTTCAC+AGG | - | chr8_1:86082951-86082970 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 86082843 | 86085106 | 86082843 | ID=Msa1221990;Name=Msa1221990 |
| chr8_1 | mRNA | 86082843 | 86085106 | 86082843 | ID=Msa1221990-mRNA-1;Parent=Msa1221990;Name=Msa1221990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|7|0|367 |
| chr8_1 | exon | 86082843 | 86083045 | 86082843 | ID=Msa1221990-mRNA-1:exon:30922;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86083362 | 86083494 | 86083362 | ID=Msa1221990-mRNA-1:exon:30923;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86083823 | 86083972 | 86083823 | ID=Msa1221990-mRNA-1:exon:30924;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86084068 | 86084244 | 86084068 | ID=Msa1221990-mRNA-1:exon:30925;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86084400 | 86084648 | 86084400 | ID=Msa1221990-mRNA-1:exon:30926;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86084781 | 86084849 | 86084781 | ID=Msa1221990-mRNA-1:exon:30927;Parent=Msa1221990-mRNA-1 |
| chr8_1 | exon | 86084984 | 86085106 | 86084984 | ID=Msa1221990-mRNA-1:exon:30928;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86082843 | 86083045 | 86082843 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86083362 | 86083494 | 86083362 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86083823 | 86083972 | 86083823 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86084068 | 86084244 | 86084068 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86084400 | 86084648 | 86084400 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86084781 | 86084849 | 86084781 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| chr8_1 | CDS | 86084984 | 86085106 | 86084984 | ID=Msa1221990-mRNA-1:cds;Parent=Msa1221990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
