Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221930 | PNY06370.1 | 88.399 | 681 | 49 | 3 | 1 | 651 | 1 | 681 | 0.0 | 1212 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0820140 | Msa1221930 | 0.824683 | 7.068098e-54 | -8.615850e-47 |
| Msa1221930 | Msa1265050 | 0.845985 | 2.886116e-59 | -8.615850e-47 |
| Msa1221930 | Msa1337780 | 0.864289 | 1.353643e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221930 | MtrunA17_Chr4g0073001 | 97.248 | 327 | 8 | 1 | 326 | 651 | 27 | 353 | 0.0 | 650 |
| Msa1221930 | MtrunA17_Chr4g0073001 | 79.872 | 313 | 62 | 1 | 4 | 315 | 35 | 347 | 0.0 | 526 |
| Msa1221930 | MtrunA17_Chr4g0072981 | 96.190 | 315 | 12 | 0 | 1 | 315 | 54 | 368 | 0.0 | 628 |
| Msa1221930 | MtrunA17_Chr4g0072981 | 78.710 | 310 | 66 | 0 | 341 | 650 | 64 | 373 | 0.0 | 520 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1221930 | AT5G57700.3 | 77.377 | 305 | 69 | 0 | 11 | 315 | 20 | 324 | 5.58e-172 | 494 |
| Msa1221930 | AT5G57700.3 | 75.563 | 311 | 76 | 0 | 339 | 649 | 18 | 328 | 8.47e-171 | 491 |
| Msa1221930 | AT5G57700.1 | 77.377 | 305 | 69 | 0 | 11 | 315 | 14 | 318 | 5.78e-172 | 494 |
| Msa1221930 | AT5G57700.1 | 75.563 | 311 | 76 | 0 | 339 | 649 | 12 | 322 | 8.04e-171 | 491 |
| Msa1221930 | AT5G57700.4 | 77.377 | 305 | 69 | 0 | 11 | 315 | 10 | 314 | 8.25e-172 | 494 |
| Msa1221930 | AT5G57700.4 | 75.563 | 311 | 76 | 0 | 339 | 649 | 8 | 318 | 1.27e-170 | 491 |
| Msa1221930 | AT5G57700.5 | 77.377 | 305 | 69 | 0 | 11 | 315 | 9 | 313 | 9.79e-172 | 493 |
| Msa1221930 | AT5G57700.5 | 75.563 | 311 | 76 | 0 | 339 | 649 | 7 | 317 | 1.49e-170 | 490 |
| Msa1221930 | AT5G57700.2 | 77.377 | 305 | 69 | 0 | 11 | 315 | 9 | 313 | 9.79e-172 | 493 |
| Msa1221930 | AT5G57700.2 | 75.563 | 311 | 76 | 0 | 339 | 649 | 7 | 317 | 1.49e-170 | 490 |
Find 191 sgRNAs with CRISPR-Local
Find 603 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGAGTTTGTTTAACTTTA+AGG | 0.067683 | 8_1:+85923154 | Msa1221930:intron |
| TACCAAAATTTACCTGAATT+TGG | 0.077448 | 8_1:-85925183 | None:intergenic |
| TAACAGGTCACAACAGATTT+TGG | 0.166262 | 8_1:+85930539 | Msa1221930:intron |
| GGATTATTCTTGATATAAAT+TGG | 0.205156 | 8_1:-85930584 | None:intergenic |
| CTATAGGTCACGTCAGATTT+TGG | 0.234741 | 8_1:+85924961 | Msa1221930:intron |
| CAACTTCCACCTGGTATATT+AGG | 0.268997 | 8_1:+85930235 | Msa1221930:CDS |
| TTCTTGCTTCGATCCTTTAC+TGG | 0.272343 | 8_1:+85930659 | Msa1221930:CDS |
| AACTTTACTTCTGAACTTCT+TGG | 0.275798 | 8_1:-85923828 | None:intergenic |
| TGTTATACCTTATTCTTTAT+AGG | 0.279657 | 8_1:-85930259 | None:intergenic |
| CAACTTCCTCCTGGTATATT+AGG | 0.284457 | 8_1:+85924663 | Msa1221930:CDS |
| TAGAGATTTGTCGAGTTATA+AGG | 0.285852 | 8_1:-85931841 | None:intergenic |
| TTACTCTTGTTCTACAAAAT+AGG | 0.290411 | 8_1:+85929996 | Msa1221930:CDS |
| CTGTTGAAAGCTGGAACTCT+TGG | 0.290754 | 8_1:+85924837 | Msa1221930:CDS |
| GCTGGAACTCTTGGGGCGCC+TGG | 0.293777 | 8_1:+85924846 | Msa1221930:CDS |
| ACCAAAATTTACCTGAATTT+GGG | 0.295917 | 8_1:-85925182 | None:intergenic |
| CAGACGATCCACAAATTAAA+TGG | 0.296843 | 8_1:-85924817 | None:intergenic |
| TGGTGTACCTTATTCTTTAT+AGG | 0.302561 | 8_1:-85924687 | None:intergenic |
| AGTTCTTCATCACCAATTAT+AGG | 0.304830 | 8_1:-85929924 | None:intergenic |
| CTTCGATCCTTTACTGGAAT+TGG | 0.305124 | 8_1:+85930665 | Msa1221930:CDS |
| CTCTGATGTGCCTCCAAAAT+AGG | 0.320566 | 8_1:-85929268 | None:intergenic |
| CTAATGACGATGGTGATTCT+TGG | 0.323819 | 8_1:+85925487 | Msa1221930:CDS |
| ATATCACCTATACATATAAA+AGG | 0.328052 | 8_1:+85925592 | Msa1221930:CDS |
| AGGAGTTTGTTTAACTTTAA+GGG | 0.336788 | 8_1:+85923155 | Msa1221930:intron |
| TAGCCGATCTTGCTGGAAAA+TGG | 0.346809 | 8_1:+85930375 | Msa1221930:intron |
| ATATGGCAAGCACCTATAAT+TGG | 0.347884 | 8_1:+85929912 | Msa1221930:CDS |
| CAGCTTCCTAACCCAAATTC+AGG | 0.351629 | 8_1:+85925171 | Msa1221930:CDS |
| TTTATTGTATTAGGTATTGA+TGG | 0.356531 | 8_1:+85931152 | Msa1221930:intron |
| ATTAGGACCTATAAAGAATA+AGG | 0.358561 | 8_1:+85930252 | Msa1221930:CDS |
| ATATAATAGGACTCAAATTA+AGG | 0.358905 | 8_1:+85931367 | Msa1221930:CDS |
| AAGAAGTCGTCTTTGCTTGT+TGG | 0.361240 | 8_1:-85931887 | None:intergenic |
| TTGAGTCCTATTATATGTAT+AGG | 0.361772 | 8_1:-85931360 | None:intergenic |
| ATGTCACCTATACATATAAT+AGG | 0.362700 | 8_1:+85931354 | Msa1221930:CDS |
| TGTTGAAAGCTGGAACTCTT+GGG | 0.366483 | 8_1:+85924838 | Msa1221930:CDS |
| TTGGACAGCACGTTGTTGTT+AGG | 0.367222 | 8_1:+85931520 | Msa1221930:intron |
| CCTTTGATGGAGGCAAAACT+TGG | 0.367755 | 8_1:+85930708 | Msa1221930:CDS |
| ATATAAAAGGACACAAATTA+AGG | 0.370312 | 8_1:+85925605 | Msa1221930:CDS |
| CTCTTGGGGCGCCTGGGTTG+AGG | 0.371270 | 8_1:+85924853 | Msa1221930:CDS |
| ATTAGGACCTATAAAGAATA+AGG | 0.377168 | 8_1:+85924680 | Msa1221930:CDS |
| GGTTGTTCATCAGCAATTAC+TGG | 0.378896 | 8_1:-85923733 | None:intergenic |
| ATAAAACGCTCATATGATAA+AGG | 0.379798 | 8_1:+85930190 | Msa1221930:CDS |
| TCTCGTTTACTAGGTATTGA+TGG | 0.381867 | 8_1:+85925390 | Msa1221930:intron |
| AACAAGAGTAACTCATTTGA+TGG | 0.383116 | 8_1:-85929984 | None:intergenic |
| GTCAAACGCTCACATGATAA+AGG | 0.385074 | 8_1:+85924618 | Msa1221930:CDS |
| GTGCATCTGATGTGAAAATA+TGG | 0.385674 | 8_1:+85929292 | Msa1221930:CDS |
| GAAAATGGCCATTTAATTTG+TGG | 0.388353 | 8_1:+85924809 | Msa1221930:CDS |
| GGATTCCACATAGGAACATT+TGG | 0.390594 | 8_1:-85923754 | None:intergenic |
| ACTGGTTGAATCACACTTAG+AGG | 0.392097 | 8_1:-85925027 | None:intergenic |
| GGAAAGACATGGAGAAAGTA+TGG | 0.396643 | 8_1:+85930560 | Msa1221930:CDS |
| CTCACATTGGAGGATTCTTC+CGG | 0.398076 | 8_1:+85925519 | Msa1221930:CDS |
| CTCGTTTACTAGGTATTGAT+GGG | 0.403374 | 8_1:+85925391 | Msa1221930:intron |
| TTGGTTGGCAGAATGGAATA+TGG | 0.403734 | 8_1:+85929895 | Msa1221930:intron |
| GTCTTACTACGATCCTTTGA+TGG | 0.403900 | 8_1:+85925081 | Msa1221930:CDS |
| AGTTTGGTAACCTTTACTAT+AGG | 0.407694 | 8_1:-85931690 | None:intergenic |
| ATTTATGCATGCAATTCATA+TGG | 0.410238 | 8_1:+85931604 | Msa1221930:three_prime_UTR |
| CATCAGATGGTGGCCAGACT+TGG | 0.412755 | 8_1:+85925130 | Msa1221930:CDS |
| GCTGGAACTCATGGGGATCA+TGG | 0.415652 | 8_1:+85930427 | Msa1221930:CDS |
| CTAAACTCTACAGAAGTTCA+TGG | 0.416358 | 8_1:+85929022 | Msa1221930:CDS |
| TATATGTCAGAATCCTTTGA+TGG | 0.417523 | 8_1:+85930695 | Msa1221930:CDS |
| GTTTCGCATGTCCCCAAGTC+TGG | 0.418865 | 8_1:-85925143 | None:intergenic |
| GGAGAATAAATGTCCAATAC+AGG | 0.422209 | 8_1:+85923180 | Msa1221930:CDS |
| GAGACTATGCTAGGAATAAC+TGG | 0.425457 | 8_1:+85931732 | Msa1221930:three_prime_UTR |
| TCTACCAGTGGTCCCTGTAT+TGG | 0.426122 | 8_1:-85923193 | None:intergenic |
| GTGGATCTTCTGTCGAAAGC+TGG | 0.430366 | 8_1:+85930409 | Msa1221930:CDS |
| ACTCGCAGCTGATCGTAGTT+TGG | 0.430886 | 8_1:-85931706 | None:intergenic |
| TAGAATTGATTCTAATTTGA+AGG | 0.433889 | 8_1:+85922866 | Msa1221930:five_prime_UTR |
| CTGTCGAAAGCTGGAACTCA+TGG | 0.439355 | 8_1:+85930418 | Msa1221930:CDS |
| TATTATAAACAAGCAATATA+CGG | 0.442580 | 8_1:-85925431 | None:intergenic |
| GCACCAGGCACTTACATTAG+AGG | 0.443436 | 8_1:+85931271 | Msa1221930:CDS |
| CTACGATCCTTTGATGGCAT+TGG | 0.444545 | 8_1:+85925087 | Msa1221930:CDS |
| AATTTACCTGAATTTGGGTT+AGG | 0.446965 | 8_1:-85925177 | None:intergenic |
| GAGGAGTTAACCTTTCTTGA+AGG | 0.451786 | 8_1:+85923214 | Msa1221930:CDS |
| GAAAATGGTGACTTACTTTG+TGG | 0.454500 | 8_1:+85930390 | Msa1221930:CDS |
| CTGGAACTCTTGGGGCGCCT+GGG | 0.455117 | 8_1:+85924847 | Msa1221930:CDS |
| AAGTTGTTCTCTTTCTGTCC+AGG | 0.455665 | 8_1:-85930218 | None:intergenic |
| ATCAGATGGTGGCCAGACTT+GGG | 0.457556 | 8_1:+85925131 | Msa1221930:CDS |
| CAGAGGATGATGGTGATTCA+TGG | 0.457718 | 8_1:+85931249 | Msa1221930:CDS |
| GATGGAAGTTTGAACAGTAC+AGG | 0.461834 | 8_1:-85929966 | None:intergenic |
| TTGCATATAACACAATTTCA+AGG | 0.465981 | 8_1:+85931204 | Msa1221930:CDS |
| TTTGCAGTCTGGTATGGTAC+AGG | 0.467839 | 8_1:-85930623 | None:intergenic |
| GTACCATACCAGACTGCAAA+GGG | 0.475643 | 8_1:+85930626 | Msa1221930:CDS |
| GTCCCCTTTGCAGTCTGGTA+TGG | 0.476765 | 8_1:-85930629 | None:intergenic |
| GACGGAAGTTTGAATAGTAC+AGG | 0.478802 | 8_1:-85923775 | None:intergenic |
| TTCCCGTCTGCAGTCTGATA+AGG | 0.481979 | 8_1:-85925051 | None:intergenic |
| GATGGGATTAAGCTTAAAGA+TGG | 0.482873 | 8_1:+85931170 | Msa1221930:CDS |
| GCAGTGTCCCCTTTGCAGTC+TGG | 0.486735 | 8_1:-85930634 | None:intergenic |
| GGGCACCCGATGTCAAGATA+TGG | 0.490903 | 8_1:+85923413 | Msa1221930:CDS |
| AACTCTACCAATTCCAGTAA+AGG | 0.492110 | 8_1:-85930672 | None:intergenic |
| TGCAACCATATCTTGACATC+GGG | 0.492127 | 8_1:-85923418 | None:intergenic |
| TTGCAAAAGCATCTGCAACT+TGG | 0.493956 | 8_1:+85931793 | Msa1221930:three_prime_UTR |
| CGACAAATCTCTAACGCAAC+CGG | 0.495749 | 8_1:+85931851 | Msa1221930:three_prime_UTR |
| TGGTGGATAGGATGGAAGAT+GGG | 0.498718 | 8_1:+85923705 | Msa1221930:intron |
| TTGGTGGATAGGATGGAAGA+TGG | 0.503630 | 8_1:+85923704 | Msa1221930:intron |
| GGCAGGTCATGGAGCAAGCA+TGG | 0.503962 | 8_1:+85924982 | Msa1221930:CDS |
| GTATTAGCCCATCACTAGCT+TGG | 0.504254 | 8_1:-85925569 | None:intergenic |
| CTTTGATGGAGGCAAAACTT+GGG | 0.504583 | 8_1:+85930709 | Msa1221930:CDS |
| GTATGAGGCTCTCACATTGG+AGG | 0.506287 | 8_1:+85925509 | Msa1221930:CDS |
| TCATGCTTCTACCATTGTTG+AGG | 0.508120 | 8_1:+85923258 | Msa1221930:CDS |
| GGGAGCTGAGCCTTCAAGAA+AGG | 0.510552 | 8_1:-85923224 | None:intergenic |
| AGAAGCATGGCAATTATTGA+AGG | 0.511881 | 8_1:-85929104 | None:intergenic |
| TGTCGAAAGCTGGAACTCAT+GGG | 0.512024 | 8_1:+85930419 | Msa1221930:CDS |
| TGCATATAACACAATTTCAA+GGG | 0.513627 | 8_1:+85931205 | Msa1221930:CDS |
| CTGGAACTCATGGGGATCAT+GGG | 0.515269 | 8_1:+85930428 | Msa1221930:CDS |
| ATTAGAGGATACTGTGGGAA+TGG | 0.516146 | 8_1:+85931286 | Msa1221930:CDS |
| TCACTAGCTTGGATGACAGC+AGG | 0.517841 | 8_1:-85925558 | None:intergenic |
| GTTTGTTTAACTTTAAGGGA+TGG | 0.518122 | 8_1:+85923159 | Msa1221930:exon |
| GCTGTCATCCAAGCTAGTGA+TGG | 0.519152 | 8_1:+85925561 | Msa1221930:CDS |
| TTATTGTATTAGGTATTGAT+GGG | 0.519749 | 8_1:+85931153 | Msa1221930:intron |
| TCTACAGAAGTTCATGGTAA+AGG | 0.520761 | 8_1:+85929028 | Msa1221930:CDS |
| AGAAGCATGACAACTATTGA+AGG | 0.522607 | 8_1:-85923245 | None:intergenic |
| GTGGATCGTCTGTTGAAAGC+TGG | 0.524401 | 8_1:+85924828 | Msa1221930:CDS |
| CGATGGTGATTCTTGGTATG+AGG | 0.524434 | 8_1:+85925494 | Msa1221930:CDS |
| TCTGCAGTCTGATAAGGTAC+TGG | 0.528660 | 8_1:-85925045 | None:intergenic |
| TTGTTCAATTTCAGATGGAG+TGG | 0.529232 | 8_1:+85924591 | Msa1221930:intron |
| TGTTGGTTTCTCAAAATCAC+CGG | 0.533164 | 8_1:-85931870 | None:intergenic |
| CATTATCAGAACTATCCTAC+TGG | 0.533624 | 8_1:+85925883 | Msa1221930:CDS |
| GGACTCTCCCATCACTAGCT+TGG | 0.534109 | 8_1:-85931331 | None:intergenic |
| AGCACGTTGTTGTTAGGCCA+AGG | 0.534872 | 8_1:+85931526 | Msa1221930:intron |
| ATTGGAGGATTCTTCCGGAA+TGG | 0.536187 | 8_1:+85925524 | Msa1221930:CDS |
| GAAAGAGAGCAACTTCCTCC+TGG | 0.538595 | 8_1:+85924654 | Msa1221930:CDS |
| TTTGGGTTATGAAGCTGTGT+AGG | 0.539143 | 8_1:-85930743 | None:intergenic |
| CCATGCTTCTACCATTGTTG+AGG | 0.541835 | 8_1:+85929117 | Msa1221930:CDS |
| TTTGGGTTAGGAAGCTGAGT+AGG | 0.543335 | 8_1:-85925165 | None:intergenic |
| AGGGTATGAGAATTCCATTC+CGG | 0.548345 | 8_1:-85925538 | None:intergenic |
| CTTGCTCTCTCAGAGGATGA+TGG | 0.551867 | 8_1:+85931239 | Msa1221930:CDS |
| TACTCTACCAATGCCATCAA+AGG | 0.555326 | 8_1:-85925094 | None:intergenic |
| TGTTTATAATACTACATCGA+GGG | 0.555488 | 8_1:+85925443 | Msa1221930:CDS |
| TATATCAAGAATAATCCTCT+AGG | 0.556170 | 8_1:+85930590 | Msa1221930:CDS |
| AAATTAGAAGCCTATAGTAA+AGG | 0.563654 | 8_1:+85931680 | Msa1221930:three_prime_UTR |
| AATATGGTTGCAGACTTACA+AGG | 0.564820 | 8_1:+85929308 | Msa1221930:CDS |
| TCACTAGCTTGGATAACAGC+AGG | 0.569119 | 8_1:-85931320 | None:intergenic |
| TTGGTATGAGGCTCTCACAT+TGG | 0.569332 | 8_1:+85925506 | Msa1221930:CDS |
| CTGTCATCCAAGCTAGTGAT+GGG | 0.570334 | 8_1:+85925562 | Msa1221930:CDS |
| AATACAGGGACCACTGGTAG+AGG | 0.570816 | 8_1:+85923195 | Msa1221930:CDS |
| CTGTTATCCAAGCTAGTGAT+GGG | 0.571738 | 8_1:+85931324 | Msa1221930:CDS |
| CACTAGCTTGGATGACAGCA+GGG | 0.571850 | 8_1:-85925557 | None:intergenic |
| GCTGTTATCCAAGCTAGTGA+TGG | 0.573480 | 8_1:+85931323 | Msa1221930:CDS |
| TGATGGTGATTCATGGCACC+AGG | 0.574432 | 8_1:+85931256 | Msa1221930:CDS |
| AAGAACTAAATGTTCCTATG+TGG | 0.575733 | 8_1:+85929940 | Msa1221930:CDS |
| CTCATGGGGATCATGGGCAG+AGG | 0.576464 | 8_1:+85930434 | Msa1221930:CDS |
| TTTGATGGAGGCAAAACTTG+GGG | 0.576603 | 8_1:+85930710 | Msa1221930:CDS |
| GCGAGTTGCGAGACTATGCT+AGG | 0.577068 | 8_1:+85931723 | Msa1221930:three_prime_UTR |
| ATGTCCAATACAGGGACCAC+TGG | 0.580826 | 8_1:+85923189 | Msa1221930:CDS |
| AACCTACGAGTACTTGAAGA+AGG | 0.582291 | 8_1:+85922807 | Msa1221930:five_prime_UTR |
| TCAGATGGTGGCCAGACTTG+GGG | 0.584192 | 8_1:+85925132 | Msa1221930:CDS |
| TATCCTCTAATGTAAGTGCC+TGG | 0.586915 | 8_1:-85931274 | None:intergenic |
| TTTATAGGTCCTAATATACC+AGG | 0.587132 | 8_1:-85924672 | None:intergenic |
| AACAACCAAATGTTCCTATG+TGG | 0.589763 | 8_1:+85923749 | Msa1221930:CDS |
| AATAGTACAGGATTCCACAT+AGG | 0.590460 | 8_1:-85923763 | None:intergenic |
| TATTATATGTATAGGTGACA+TGG | 0.592092 | 8_1:-85931352 | None:intergenic |
| GTTGAAAGCTGGAACTCTTG+GGG | 0.594151 | 8_1:+85924839 | Msa1221930:CDS |
| TTTATAGGTCCTAATATACC+AGG | 0.595601 | 8_1:-85930244 | None:intergenic |
| CTGCAACCATATCTTGACAT+CGG | 0.599218 | 8_1:-85923419 | None:intergenic |
| TGTTATATGCAATCAATAGA+CGG | 0.601096 | 8_1:-85931193 | None:intergenic |
| CACCTTCTTCAAGTACTCGT+AGG | 0.604627 | 8_1:-85922809 | None:intergenic |
| GTACCTTATCAGACTGCAGA+CGG | 0.604743 | 8_1:+85925048 | Msa1221930:CDS |
| GATGGGGTTAAGCTTCGAGA+TGG | 0.609802 | 8_1:+85925408 | Msa1221930:CDS |
| CATATGATAAAGGAATTACC+TGG | 0.613149 | 8_1:+85930200 | Msa1221930:CDS |
| TACCTTATCAGACTGCAGAC+GGG | 0.615526 | 8_1:+85925049 | Msa1221930:CDS |
| CACATGATAAAGGAATTACA+TGG | 0.616043 | 8_1:+85924628 | Msa1221930:CDS |
| GTAATGTATGACCTCAACAA+TGG | 0.616633 | 8_1:-85929128 | None:intergenic |
| CAGCTTCATAACCCAAACTC+AGG | 0.616786 | 8_1:+85930749 | Msa1221930:CDS |
| TGTATTTCAGAATCATCAGA+TGG | 0.619976 | 8_1:+85925117 | Msa1221930:CDS |
| ATGTCAGAATCCTTTGATGG+AGG | 0.620638 | 8_1:+85930698 | Msa1221930:CDS |
| AACAGTACAGGATTCCACAT+AGG | 0.621525 | 8_1:-85929954 | None:intergenic |
| GCATATAACACAATTTCAAG+GGG | 0.626738 | 8_1:+85931206 | Msa1221930:CDS |
| AATAGAAGTAGCTCATCTGA+CGG | 0.627581 | 8_1:-85923793 | None:intergenic |
| GAAGCATGGCAATTATTGAA+GGG | 0.629938 | 8_1:-85929103 | None:intergenic |
| GTCGAAAGCTGGAACTCATG+GGG | 0.637175 | 8_1:+85930420 | Msa1221930:CDS |
| TTAATCCATGACCTCAACAA+TGG | 0.638267 | 8_1:-85923269 | None:intergenic |
| CCTCAACAATGGTAGAAGCA+TGG | 0.638870 | 8_1:-85929117 | None:intergenic |
| TTGTTTATAATACTACATCG+AGG | 0.647975 | 8_1:+85925442 | Msa1221930:CDS |
| GAAGCATGACAACTATTGAA+GGG | 0.650984 | 8_1:-85923244 | None:intergenic |
| TTGATGGAGGCAAAACTTGG+GGG | 0.652700 | 8_1:+85930711 | Msa1221930:CDS |
| GTTGCACTTTCTAATGACGA+TGG | 0.655171 | 8_1:+85925477 | Msa1221930:CDS |
| GAGAATAAATGTCCAATACA+GGG | 0.656905 | 8_1:+85923181 | Msa1221930:CDS |
| GTTTATAATACTACATCGAG+GGG | 0.661060 | 8_1:+85925444 | Msa1221930:CDS |
| TCGTTTACTAGGTATTGATG+GGG | 0.663112 | 8_1:+85925392 | Msa1221930:intron |
| TAAAGTTACAACCTCAACCC+AGG | 0.664258 | 8_1:-85924864 | None:intergenic |
| TGGTCTGCAATGCATCACCT+TGG | 0.665302 | 8_1:-85931543 | None:intergenic |
| TGTACCATACCAGACTGCAA+AGG | 0.666438 | 8_1:+85930625 | Msa1221930:CDS |
| GAAAGAGAACAACTTCCACC+TGG | 0.670747 | 8_1:+85930226 | Msa1221930:CDS |
| AAGGTTAACTCCTCTACCAG+TGG | 0.680938 | 8_1:-85923205 | None:intergenic |
| ATTTCAGAATCATCAGATGG+TGG | 0.681034 | 8_1:+85925120 | Msa1221930:CDS |
| GCTTAAACTTGCTCTCTCAG+AGG | 0.686643 | 8_1:+85931232 | Msa1221930:CDS |
| ATGGTAAAGGCTATATACAG+AGG | 0.688446 | 8_1:+85929041 | Msa1221930:CDS |
| ACTTACATTAGAGGATACTG+TGG | 0.691470 | 8_1:+85931280 | Msa1221930:CDS |
| ATAGGTCCTAATATACCAGG+TGG | 0.694136 | 8_1:-85930241 | None:intergenic |
| ACAGGTTGAATCACACCTAG+AGG | 0.701319 | 8_1:-85930605 | None:intergenic |
| CTTACATTAGAGGATACTGT+GGG | 0.704692 | 8_1:+85931281 | Msa1221930:CDS |
| ATAGGTCCTAATATACCAGG+AGG | 0.707005 | 8_1:-85924669 | None:intergenic |
| TACCATACCAGACTGCAAAG+GGG | 0.745321 | 8_1:+85930627 | Msa1221930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAAATATAAAAATATT+TGG | - | chr8_1:85924081-85924100 | None:intergenic | 0.0% |
| !! | TATATATATATATAAAATAA+TGG | - | chr8_1:85928873-85928892 | None:intergenic | 0.0% |
| !! | AATTAAAATTAGAATTATTG+TGG | - | chr8_1:85927789-85927808 | None:intergenic | 10.0% |
| !! | ATCTTACAATATAAAAAATA+TGG | + | chr8_1:85927851-85927870 | Msa1221930:intron | 10.0% |
| !! | TCTTACAATATAAAAAATAT+GGG | + | chr8_1:85927852-85927871 | Msa1221930:intron | 10.0% |
| !! | TACTTCAATATAAAAAAATA+AGG | + | chr8_1:85928514-85928533 | Msa1221930:intron | 10.0% |
| !!! | ATATATATAAAATAATGGAT+CGG | - | chr8_1:85928868-85928887 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTCACT+AGG | + | chr8_1:85929221-85929240 | Msa1221930:intron | 10.0% |
| !! | TAAAAATATTTGGAAGAAAA+AGG | - | chr8_1:85924071-85924090 | None:intergenic | 15.0% |
| !! | TATGTAAAATAATTTCTAAC+AGG | + | chr8_1:85924363-85924382 | Msa1221930:intron | 15.0% |
| !! | TATTATAAACAAGCAATATA+CGG | - | chr8_1:85925434-85925453 | None:intergenic | 15.0% |
| !! | TATTATAAGAAATACATGAA+AGG | - | chr8_1:85925723-85925742 | None:intergenic | 15.0% |
| !! | AAAATACTGAAGAAATAAAA+AGG | - | chr8_1:85925859-85925878 | None:intergenic | 15.0% |
| !!! | TTTGTTTCTAATATATCATA+CGG | + | chr8_1:85925977-85925996 | Msa1221930:intron | 15.0% |
| !! | ATATAAATGAAGTTAATAGT+TGG | - | chr8_1:85926081-85926100 | None:intergenic | 15.0% |
| !! | ATAAGAAAAACATAATACAA+AGG | - | chr8_1:85926448-85926467 | None:intergenic | 15.0% |
| !!! | ATTTTTAAAATGTAACTCAA+AGG | + | chr8_1:85926490-85926509 | Msa1221930:intron | 15.0% |
| !! | AACATAAATAAATTCCAATA+CGG | - | chr8_1:85927036-85927055 | None:intergenic | 15.0% |
| !!! | TAAGCATATCATTTATATTT+TGG | + | chr8_1:85927250-85927269 | Msa1221930:intron | 15.0% |
| !!! | TAAAACTTTTTATGCTTTTA+AGG | + | chr8_1:85927941-85927960 | Msa1221930:intron | 15.0% |
| !! | TTCTTATATATCTTTCATTT+AGG | - | chr8_1:85931068-85931087 | None:intergenic | 15.0% |
| !! | TAAATGAAAGATATATAAGA+AGG | + | chr8_1:85931067-85931086 | Msa1221930:intron | 15.0% |
| !! | AAATGAAAGATATATAAGAA+GGG | + | chr8_1:85931068-85931087 | Msa1221930:intron | 15.0% |
| !!! | AAATTTCCTTTTATTGTATT+AGG | + | chr8_1:85931143-85931162 | Msa1221930:intron | 15.0% |
| !!! | TGCATTGATTTCAAAAAAAA+TGG | - | chr8_1:85922769-85922788 | None:intergenic | 20.0% |
| !!! | TAGAATTGATTCTAATTTGA+AGG | + | chr8_1:85922866-85922885 | Msa1221930:five_prime_UTR | 20.0% |
| !! | CAAATCATATTTAATGTGTT+TGG | - | chr8_1:85923005-85923024 | None:intergenic | 20.0% |
| !! | CAAACACATTAAATATGATT+TGG | + | chr8_1:85923003-85923022 | Msa1221930:intron | 20.0% |
| !!! | AAGCAATAATATTTTTTTGC+AGG | + | chr8_1:85923135-85923154 | Msa1221930:intron | 20.0% |
| !! | ATACATAACATATTTCTTGA+AGG | - | chr8_1:85923311-85923330 | None:intergenic | 20.0% |
| !!! | ATTTTTTGGTTGCTTATTTT+GGG | + | chr8_1:85923377-85923396 | Msa1221930:CDS | 20.0% |
| !!! | TTAACTTTTTTGAACACATT+TGG | + | chr8_1:85923685-85923704 | Msa1221930:intron | 20.0% |
| !! | AGAAAAATAGATGTAATAAG+AGG | - | chr8_1:85923866-85923885 | None:intergenic | 20.0% |
| !! | ATATCATAAATGTATGACAA+AGG | - | chr8_1:85923963-85923982 | None:intergenic | 20.0% |
| !! | AAATAATTTCTAACAGGTAA+AGG | + | chr8_1:85924369-85924388 | Msa1221930:intron | 20.0% |
| !! | TTCTTTGACAAATAATTCAT+CGG | + | chr8_1:85924421-85924440 | Msa1221930:intron | 20.0% |
| !! | ATAACAAACTCAAAATAACA+TGG | - | chr8_1:85924541-85924560 | None:intergenic | 20.0% |
| !!! | TTAATTTGTTCAATTTCAGA+TGG | + | chr8_1:85924586-85924605 | Msa1221930:intron | 20.0% |
| !! | AAATAGAAGGAAATAAATTC+TGG | - | chr8_1:85924710-85924729 | None:intergenic | 20.0% |
| !! | ATAGTAATTAAATTCAGAAC+TGG | - | chr8_1:85924772-85924791 | None:intergenic | 20.0% |
| !! | TAAGTAGCAAAGAATTATAA+AGG | - | chr8_1:85925336-85925355 | None:intergenic | 20.0% |
| !! | ATATCACCTATACATATAAA+AGG | + | chr8_1:85925592-85925611 | Msa1221930:CDS | 20.0% |
| !! | ATATAAAAGGACACAAATTA+AGG | + | chr8_1:85925605-85925624 | Msa1221930:CDS | 20.0% |
| !!! | TCATTTTTCTTTTAGACAAA+AGG | + | chr8_1:85926359-85926378 | Msa1221930:intron | 20.0% |
| !! | TTTCTTATAAATAGAACTAG+AGG | + | chr8_1:85926460-85926479 | Msa1221930:intron | 20.0% |
| !!! | TTTATTTTTTCCTTTTACTC+TGG | - | chr8_1:85926524-85926543 | None:intergenic | 20.0% |
| !!! | ACATTTAGAATCTTTTTTGA+TGG | + | chr8_1:85926989-85927008 | Msa1221930:intron | 20.0% |
| !!! | CATTTAGAATCTTTTTTGAT+GGG | + | chr8_1:85926990-85927009 | Msa1221930:intron | 20.0% |
| !!! | TTTTTTATTCTTCACAATAG+CGG | + | chr8_1:85927070-85927089 | Msa1221930:intron | 20.0% |
| !!! | ATCAGTGAATTATTATTTTC+GGG | - | chr8_1:85927228-85927247 | None:intergenic | 20.0% |
| !!! | GATCAGTGAATTATTATTTT+CGG | - | chr8_1:85927229-85927248 | None:intergenic | 20.0% |
| !!! | ATAGTATAGGACTAAATTTT+CGG | + | chr8_1:85927338-85927357 | Msa1221930:intron | 20.0% |
| !! | TTAAACTTGGTACAAATTAT+GGG | - | chr8_1:85927434-85927453 | None:intergenic | 20.0% |
| !!! | CTTTACTCTCTATTATTTTT+TGG | - | chr8_1:85928048-85928067 | None:intergenic | 20.0% |
| !! | TTGTAGTCCTTAAATAAAAA+AGG | + | chr8_1:85928073-85928092 | Msa1221930:intron | 20.0% |
| !!! | GTTCTAATTTTGTAATTCTA+AGG | + | chr8_1:85928192-85928211 | Msa1221930:intron | 20.0% |
| !! | AATATGAAAATAACAAGCTA+GGG | - | chr8_1:85928307-85928326 | None:intergenic | 20.0% |
| !!! | GTTGTTGTAGTATTTTTTTT+AGG | - | chr8_1:85928396-85928415 | None:intergenic | 20.0% |
| !! | TAAAAATGATTGAAAATGGA+AGG | - | chr8_1:85929172-85929191 | None:intergenic | 20.0% |
| !!! | TCCATTTTCAATCATTTTTA+AGG | + | chr8_1:85929172-85929191 | Msa1221930:intron | 20.0% |
| !! | ACCTTAAAAATGATTGAAAA+TGG | - | chr8_1:85929176-85929195 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTTCACTAGGT+TGG | + | chr8_1:85929225-85929244 | Msa1221930:intron | 20.0% |
| !!! | TTTTTTTTTTTCACTAGGTT+GGG | + | chr8_1:85929226-85929245 | Msa1221930:intron | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+GGG | - | chr8_1:85929551-85929570 | None:intergenic | 20.0% |
| !! | ATTAAGTTATTTATCCAAAC+AGG | - | chr8_1:85929552-85929571 | None:intergenic | 20.0% |
| !! | ATACATATATGAAGAATGTA+AGG | - | chr8_1:85930050-85930069 | None:intergenic | 20.0% |
| !!! | TTTTTGAATTAATGCAATTG+AGG | + | chr8_1:85930113-85930132 | Msa1221930:intron | 20.0% |
| !! | TAAAATAAGCCAATTTCTTT+AGG | - | chr8_1:85930151-85930170 | None:intergenic | 20.0% |
| !!! | TTGGCTTATTTTATTTTAGA+TGG | + | chr8_1:85930158-85930177 | Msa1221930:intron | 20.0% |
| !!! | TTATTTTATTTTAGATGGAG+TGG | + | chr8_1:85930163-85930182 | Msa1221930:intron | 20.0% |
| !! | TGTTATACCTTATTCTTTAT+AGG | - | chr8_1:85930262-85930281 | None:intergenic | 20.0% |
| !! | GGATTATTCTTGATATAAAT+TGG | - | chr8_1:85930587-85930606 | None:intergenic | 20.0% |
| !! | TACAAGCAACATAAATATAT+TGG | - | chr8_1:85930785-85930804 | None:intergenic | 20.0% |
| !! | TCAATACCTAATACAATAAA+AGG | - | chr8_1:85931152-85931171 | None:intergenic | 20.0% |
| !!! | TTTATTGTATTAGGTATTGA+TGG | + | chr8_1:85931152-85931171 | Msa1221930:intron | 20.0% |
| !!! | TTATTGTATTAGGTATTGAT+GGG | + | chr8_1:85931153-85931172 | Msa1221930:intron | 20.0% |
| !! | ATATAATAGGACTCAAATTA+AGG | + | chr8_1:85931367-85931386 | Msa1221930:CDS | 20.0% |
| !! | AGGTATATATATTATGCATA+TGG | + | chr8_1:85931387-85931406 | Msa1221930:intron | 20.0% |
| !!! | CTTTTTTCCTTGTTTTTATT+TGG | + | chr8_1:85931501-85931520 | Msa1221930:intron | 20.0% |
| !!! | TTTTCCTTTTTCTTTTTGTT+GGG | - | chr8_1:85931662-85931681 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTTTCTTTTTGT+TGG | - | chr8_1:85931663-85931682 | None:intergenic | 20.0% |
| !! | ATTGATTCTAATTTGAAGGT+AGG | + | chr8_1:85922870-85922889 | Msa1221930:intron | 25.0% |
| !! | CATTAAATATGATTTGGAAG+TGG | + | chr8_1:85923009-85923028 | Msa1221930:intron | 25.0% |
| !! | AGGAGTTTGTTTAACTTTAA+GGG | + | chr8_1:85923155-85923174 | Msa1221930:intron | 25.0% |
| ! | CAAAATAAGCAACCAAAAAA+TGG | - | chr8_1:85923378-85923397 | None:intergenic | 25.0% |
| !!! | CATTTTTTGGTTGCTTATTT+TGG | + | chr8_1:85923376-85923395 | Msa1221930:CDS | 25.0% |
| !!! | TTTTTTGGTTGCTTATTTTG+GGG | + | chr8_1:85923378-85923397 | Msa1221930:CDS | 25.0% |
| ! | AAAATGTGCCTTGAAAAAAT+TGG | + | chr8_1:85923553-85923572 | Msa1221930:intron | 25.0% |
| !!! | ATTTGTCTCCAATTTTTTCA+AGG | - | chr8_1:85923564-85923583 | None:intergenic | 25.0% |
| ! | AGACATCGTAGTTTATAATA+TGG | - | chr8_1:85923603-85923622 | None:intergenic | 25.0% |
| ! | TTTGTACCTTCAATATCTAT+TGG | + | chr8_1:85923622-85923641 | Msa1221930:intron | 25.0% |
| !! | CTACTTCTATTTTACAAGAT+AGG | + | chr8_1:85923805-85923824 | Msa1221930:CDS | 25.0% |
| ! | AAACACCTCAATTTGAATAA+GGG | + | chr8_1:85924444-85924463 | Msa1221930:intron | 25.0% |
| ! | ATTAGGACCTATAAAGAATA+AGG | + | chr8_1:85924680-85924699 | Msa1221930:CDS | 25.0% |
| !! | CTTGCTATAGATAAAATAGA+AGG | - | chr8_1:85924723-85924742 | None:intergenic | 25.0% |
| !! | TAGCCAATTTTGTTAGAAAA+TGG | + | chr8_1:85924794-85924813 | Msa1221930:intron | 25.0% |
| !! | GTTCATTTTCAATGTAAATC+GGG | - | chr8_1:85925008-85925027 | None:intergenic | 25.0% |
| !! | GGTTCATTTTCAATGTAAAT+CGG | - | chr8_1:85925009-85925028 | None:intergenic | 25.0% |
| ! | ACCAAAATTTACCTGAATTT+GGG | - | chr8_1:85925185-85925204 | None:intergenic | 25.0% |
| ! | TACCAAAATTTACCTGAATT+TGG | - | chr8_1:85925186-85925205 | None:intergenic | 25.0% |
| ! | TTGTTTATAATACTACATCG+AGG | + | chr8_1:85925442-85925461 | Msa1221930:CDS | 25.0% |
| ! | TGTTTATAATACTACATCGA+GGG | + | chr8_1:85925443-85925462 | Msa1221930:CDS | 25.0% |
| !! | TTGTGTCCTTTTATATGTAT+AGG | - | chr8_1:85925601-85925620 | None:intergenic | 25.0% |
| ! | AATAGCTGTCTTTAAATTGT+AGG | + | chr8_1:85925648-85925667 | Msa1221930:intron | 25.0% |
| ! | TTAAATTGTAGGTTTCAGTT+TGG | + | chr8_1:85925659-85925678 | Msa1221930:intron | 25.0% |
| ! | AAATTTACTCCACATCAATT+TGG | - | chr8_1:85925788-85925807 | None:intergenic | 25.0% |
| ! | TAACTTAAAAGTGAGTTTAG+AGG | + | chr8_1:85926141-85926160 | Msa1221930:intron | 25.0% |
| ! | AATTTGCAAATAGGAATTGA+GGG | - | chr8_1:85926232-85926251 | None:intergenic | 25.0% |
| !! | ATGTGTATCTAGAGTAAAAT+AGG | + | chr8_1:85926385-85926404 | Msa1221930:intron | 25.0% |
| ! | TGAACAAGATAATATTGATG+TGG | + | chr8_1:85926820-85926839 | Msa1221930:intron | 25.0% |
| !!! | ACCTTATTTTGCAATTTTGA+TGG | + | chr8_1:85926951-85926970 | Msa1221930:intron | 25.0% |
| !!! | CCTTATTTTGCAATTTTGAT+GGG | + | chr8_1:85926952-85926971 | Msa1221930:intron | 25.0% |
| ! | CAAGTATTTATTTACCGTAT+TGG | + | chr8_1:85927019-85927038 | Msa1221930:intron | 25.0% |
| ! | ACTATCTCCTATATCATATT+TGG | + | chr8_1:85927100-85927119 | Msa1221930:intron | 25.0% |
| ! | CTATCTCCTATATCATATTT+GGG | + | chr8_1:85927101-85927120 | Msa1221930:intron | 25.0% |
| ! | TATCTCCTATATCATATTTG+GGG | + | chr8_1:85927102-85927121 | Msa1221930:intron | 25.0% |
| !!! | CCTCGTTTTTTTAACTAAAT+GGG | - | chr8_1:85927187-85927206 | None:intergenic | 25.0% |
| !!! | TCCTCGTTTTTTTAACTAAA+TGG | - | chr8_1:85927188-85927207 | None:intergenic | 25.0% |
| !! | TCAGTGAATTATTATTTTCG+GGG | - | chr8_1:85927227-85927246 | None:intergenic | 25.0% |
| ! | AATTTAGTCCTATACTATCA+CGG | - | chr8_1:85927336-85927355 | None:intergenic | 25.0% |
| ! | TAGAGAAACATATATGTAAC+TGG | - | chr8_1:85927377-85927396 | None:intergenic | 25.0% |
| ! | CTTAAACTTGGTACAAATTA+TGG | - | chr8_1:85927435-85927454 | None:intergenic | 25.0% |
| !!! | AAATAGAGTGTCTTTTGTTT+TGG | + | chr8_1:85927697-85927716 | Msa1221930:intron | 25.0% |
| !!! | ATTTTAATTCCACGTGTATT+AGG | + | chr8_1:85927800-85927819 | Msa1221930:intron | 25.0% |
| !! | AAATGTAGTAAGTATTGCAT+TGG | - | chr8_1:85927984-85928003 | None:intergenic | 25.0% |
| !!! | ATTTTTTGGCTAATGTTAAC+CGG | - | chr8_1:85928034-85928053 | None:intergenic | 25.0% |
| !!! | GGGTGTTTAAATTTTTAGTA+AGG | - | chr8_1:85928143-85928162 | None:intergenic | 25.0% |
| ! | TTAGAACATAATAGCTCTTA+TGG | - | chr8_1:85928179-85928198 | None:intergenic | 25.0% |
| ! | AGAAATTGTAGAAACTAGTT+TGG | - | chr8_1:85928242-85928261 | None:intergenic | 25.0% |
| ! | CAATATGAAAATAACAAGCT+AGG | - | chr8_1:85928308-85928327 | None:intergenic | 25.0% |
| !!! | CTAGCTTGTTATTTTCATAT+TGG | + | chr8_1:85928306-85928325 | Msa1221930:intron | 25.0% |
| !! | AGACACAAACATTATTTCTT+GGG | - | chr8_1:85928373-85928392 | None:intergenic | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | - | chr8_1:85928475-85928494 | None:intergenic | 25.0% |
| ! | GTTCTATCATAAACCAAATT+TGG | + | chr8_1:85928479-85928498 | Msa1221930:intron | 25.0% |
| !! | TTATATTGAAGTACTTGAGT+TGG | - | chr8_1:85928507-85928526 | None:intergenic | 25.0% |
| ! | AATGATAGAAGAGATTAAGA+AGG | - | chr8_1:85928805-85928824 | None:intergenic | 25.0% |
| ! | AAATTTGCAACTTAATTCAG+AGG | - | chr8_1:85928995-85929014 | None:intergenic | 25.0% |
| ! | ACATGTAATTAACCAACATT+TGG | + | chr8_1:85929380-85929399 | Msa1221930:intron | 25.0% |
| ! | GAAACAAATATAATACAGAG+AGG | - | chr8_1:85929781-85929800 | None:intergenic | 25.0% |
| ! | TTACTCTTGTTCTACAAAAT+AGG | + | chr8_1:85929996-85930015 | Msa1221930:CDS | 25.0% |
| !!! | GACATTACTTTTGAAAATCT+TGG | - | chr8_1:85930022-85930041 | None:intergenic | 25.0% |
| ! | CAATATGAACCTAAAGAAAT+TGG | + | chr8_1:85930139-85930158 | Msa1221930:intron | 25.0% |
| ! | ATAAAACGCTCATATGATAA+AGG | + | chr8_1:85930190-85930209 | Msa1221930:CDS | 25.0% |
| ! | ATTAGGACCTATAAAGAATA+AGG | + | chr8_1:85924680-85924699 | Msa1221930:CDS | 25.0% |
| ! | TAGCTAAAAATTATTCTGTG+TGG | - | chr8_1:85930289-85930308 | None:intergenic | 25.0% |
| !!! | ACACAGAATAATTTTTAGCT+AGG | + | chr8_1:85930288-85930307 | Msa1221930:intron | 25.0% |
| ! | TGATTAAGATCAGTTCTATT+AGG | - | chr8_1:85930462-85930481 | None:intergenic | 25.0% |
| ! | TATATCAAGAATAATCCTCT+AGG | + | chr8_1:85930590-85930609 | Msa1221930:CDS | 25.0% |
| ! | TATAAGCTATTAATGCAAGT+CGG | - | chr8_1:85931119-85931138 | None:intergenic | 25.0% |
| ! | TGTTATATGCAATCAATAGA+CGG | - | chr8_1:85931196-85931215 | None:intergenic | 25.0% |
| ! | TTGCATATAACACAATTTCA+AGG | + | chr8_1:85931204-85931223 | Msa1221930:CDS | 25.0% |
| ! | TGCATATAACACAATTTCAA+GGG | + | chr8_1:85931205-85931224 | Msa1221930:CDS | 25.0% |
| ! | TATTATATGTATAGGTGACA+TGG | - | chr8_1:85931355-85931374 | None:intergenic | 25.0% |
| ! | ATGTCACCTATACATATAAT+AGG | + | chr8_1:85931354-85931373 | Msa1221930:CDS | 25.0% |
| ! | TTGAGTCCTATTATATGTAT+AGG | - | chr8_1:85931363-85931382 | None:intergenic | 25.0% |
| !!! | CACTTTCTTCTTTTAATTGA+TGG | + | chr8_1:85931416-85931435 | Msa1221930:intron | 25.0% |
| ! | ATTTATGCATGCAATTCATA+TGG | + | chr8_1:85931604-85931623 | Msa1221930:three_prime_UTR | 25.0% |
| !! | CTTTTCATTCACAAAAAACA+AGG | - | chr8_1:85931630-85931649 | None:intergenic | 25.0% |
| !!! | TGTTTTTTGTGAATGAAAAG+AGG | + | chr8_1:85931630-85931649 | Msa1221930:three_prime_UTR | 25.0% |
| !!! | GTTTTTTGTGAATGAAAAGA+GGG | + | chr8_1:85931631-85931650 | Msa1221930:three_prime_UTR | 25.0% |
| !! | TTTCCTTTTTCTTTTTGTTG+GGG | - | chr8_1:85931661-85931680 | None:intergenic | 25.0% |
| ! | AAATTAGAAGCCTATAGTAA+AGG | + | chr8_1:85931680-85931699 | Msa1221930:three_prime_UTR | 25.0% |
| !!! | CTTTTGCAAAGTTTTATTTG+AGG | - | chr8_1:85931782-85931801 | None:intergenic | 25.0% |
| !! | GTAGAACTGATTTTGATGTT+TGG | + | chr8_1:85922831-85922850 | Msa1221930:five_prime_UTR | 30.0% |
| !! | ATATGATTTGGAAGTGGTTT+TGG | + | chr8_1:85923015-85923034 | Msa1221930:intron | 30.0% |
| !! | AAGCCATATACGTGTTTTAA+TGG | - | chr8_1:85923107-85923126 | None:intergenic | 30.0% |
| ! | CAGGAGTTTGTTTAACTTTA+AGG | + | chr8_1:85923154-85923173 | Msa1221930:intron | 30.0% |
| ! | GTTTGTTTAACTTTAAGGGA+TGG | + | chr8_1:85923159-85923178 | Msa1221930:exon | 30.0% |
| GAGAATAAATGTCCAATACA+GGG | + | chr8_1:85923181-85923200 | Msa1221930:CDS | 30.0% | |
| ! | CAATGTTGTTTGATTTCTGT+AGG | + | chr8_1:85923342-85923361 | Msa1221930:intron | 30.0% |
| !!! | GGTTGATAAGAACCATTTTT+TGG | + | chr8_1:85923363-85923382 | Msa1221930:intron | 30.0% |
| !!! | TTTTTGGTTGCTTATTTTGG+GGG | + | chr8_1:85923379-85923398 | Msa1221930:CDS | 30.0% |
| !! | TATGATTTTAAAGACATGCG+GGG | - | chr8_1:85923478-85923497 | None:intergenic | 30.0% |
| !! | CTATGATTTTAAAGACATGC+GGG | - | chr8_1:85923479-85923498 | None:intergenic | 30.0% |
| !! | CCTATGATTTTAAAGACATG+CGG | - | chr8_1:85923480-85923499 | None:intergenic | 30.0% |
| TTGTCTCCAATAGATATTGA+AGG | - | chr8_1:85923631-85923650 | None:intergenic | 30.0% | |
| !!! | ACTTTTTTGAACACATTTGG+TGG | + | chr8_1:85923688-85923707 | Msa1221930:intron | 30.0% |
| AACTTTACTTCTGAACTTCT+TGG | - | chr8_1:85923831-85923850 | None:intergenic | 30.0% | |
| TTAAGTCTATAATGCAATGC+AGG | - | chr8_1:85924007-85924026 | None:intergenic | 30.0% | |
| !! | CTGTTTGTAGCTTTGTTTAT+TGG | + | chr8_1:85924044-85924063 | Msa1221930:intron | 30.0% |
| GTGATACGATAAAGAGAATT+TGG | + | chr8_1:85924154-85924173 | Msa1221930:intron | 30.0% | |
| GAAACACCTCAATTTGAATA+AGG | + | chr8_1:85924443-85924462 | Msa1221930:intron | 30.0% | |
| CACATGATAAAGGAATTACA+TGG | + | chr8_1:85924628-85924647 | Msa1221930:CDS | 30.0% | |
| TTTATAGGTCCTAATATACC+AGG | - | chr8_1:85924675-85924694 | None:intergenic | 30.0% | |
| TGGTGTACCTTATTCTTTAT+AGG | - | chr8_1:85924690-85924709 | None:intergenic | 30.0% | |
| !! | TGGCCATTTTCTAACAAAAT+TGG | - | chr8_1:85924800-85924819 | None:intergenic | 30.0% |
| !! | GAAAATGGCCATTTAATTTG+TGG | + | chr8_1:85924809-85924828 | Msa1221930:CDS | 30.0% |
| CTTTACTGATCCTAATTAAG+CGG | + | chr8_1:85924882-85924901 | Msa1221930:intron | 30.0% | |
| !!! | TTTTGTTTTTGGTGTGCTAT+AGG | + | chr8_1:85924945-85924964 | Msa1221930:intron | 30.0% |
| TGTATTTCAGAATCATCAGA+TGG | + | chr8_1:85925117-85925136 | Msa1221930:CDS | 30.0% | |
| ! | AATTTACCTGAATTTGGGTT+AGG | - | chr8_1:85925180-85925199 | None:intergenic | 30.0% |
| ! | ACCCAAATTCAGGTAAATTT+TGG | + | chr8_1:85925181-85925200 | Msa1221930:intron | 30.0% |
| TAACTATAACTATACGAGCT+AGG | + | chr8_1:85925259-85925278 | Msa1221930:intron | 30.0% | |
| ! | TAACCTGTTTCGAGTATTAA+TGG | + | chr8_1:85925354-85925373 | Msa1221930:intron | 30.0% |
| GTTTATAATACTACATCGAG+GGG | + | chr8_1:85925444-85925463 | Msa1221930:CDS | 30.0% | |
| AATTATCCTTACACAGAACA+CGG | + | chr8_1:85926008-85926027 | Msa1221930:intron | 30.0% | |
| GAATTTGCAAATAGGAATTG+AGG | - | chr8_1:85926233-85926252 | None:intergenic | 30.0% | |
| GTCTTTGTGAATTTGCAAAT+AGG | - | chr8_1:85926241-85926260 | None:intergenic | 30.0% | |
| !! | CTCATTTGAAAGTACTCATT+TGG | - | chr8_1:85926263-85926282 | None:intergenic | 30.0% |
| AACTCACTTGTATAAGATAG+TGG | + | chr8_1:85926331-85926350 | Msa1221930:intron | 30.0% | |
| ACTACCACTACTATGATATT+CGG | - | chr8_1:85926651-85926670 | None:intergenic | 30.0% | |
| ACAAGATAATATTGATGTGG+TGG | + | chr8_1:85926823-85926842 | Msa1221930:intron | 30.0% | |
| TTAGAATAGAAGTGAAGATG+AGG | + | chr8_1:85926849-85926868 | Msa1221930:intron | 30.0% | |
| CCCATCAAAATTGCAAAATA+AGG | - | chr8_1:85926955-85926974 | None:intergenic | 30.0% | |
| CCCATTTAGTTAAAAAAACG+AGG | + | chr8_1:85927184-85927203 | Msa1221930:intron | 30.0% | |
| ATGTAACTGGTATTAACTGT+AGG | - | chr8_1:85927364-85927383 | None:intergenic | 30.0% | |
| ACCCTTGTAAAACTATACAA+GGG | - | chr8_1:85927402-85927421 | None:intergenic | 30.0% | |
| TACCCTTGTAAAACTATACA+AGG | - | chr8_1:85927403-85927422 | None:intergenic | 30.0% | |
| !! | TTTTGGTTAATCCTTTGACA+AGG | + | chr8_1:85927714-85927733 | Msa1221930:intron | 30.0% |
| TTTGGTTAATCCTTTGACAA+GGG | + | chr8_1:85927715-85927734 | Msa1221930:intron | 30.0% | |
| AATCTATAAACCCTTGTCAA+AGG | - | chr8_1:85927728-85927747 | None:intergenic | 30.0% | |
| ATTAACTTACCTAATACACG+TGG | - | chr8_1:85927812-85927831 | None:intergenic | 30.0% | |
| AAAATATGGGTCATGTTAAC+CGG | + | chr8_1:85927865-85927884 | Msa1221930:intron | 30.0% | |
| TAATCCTCAAGGATTATTAG+CGG | - | chr8_1:85928100-85928119 | None:intergenic | 30.0% | |
| ! | GAGACACAAACATTATTTCT+TGG | - | chr8_1:85928374-85928393 | None:intergenic | 30.0% |
| TAAAAAAATAAGGCAAAGCC+AGG | + | chr8_1:85928524-85928543 | Msa1221930:intron | 30.0% | |
| GAAATGTGTCTTTATAGCAT+AGG | + | chr8_1:85928626-85928645 | Msa1221930:intron | 30.0% | |
| AAGAGATTAAGAAGGCTATA+TGG | - | chr8_1:85928797-85928816 | None:intergenic | 30.0% | |
| TTGTTCATATTCACTAACCT+AGG | + | chr8_1:85928936-85928955 | Msa1221930:intron | 30.0% | |
| AGGAGTTTAATTGCTTCTTA+TGG | - | chr8_1:85928975-85928994 | None:intergenic | 30.0% | |
| ! | ATTAAGTTGCAAATTTCTGC+AGG | + | chr8_1:85928999-85929018 | Msa1221930:intron | 30.0% |
| !!! | CATTTTTTGGTTGCCTATTT+TGG | + | chr8_1:85929255-85929274 | Msa1221930:CDS | 30.0% |
| GTAATTAACCAACATTTGGT+TGG | + | chr8_1:85929384-85929403 | Msa1221930:intron | 30.0% | |
| AAGTTATGTCCAAACTATCT+TGG | + | chr8_1:85929618-85929637 | Msa1221930:intron | 30.0% | |
| CAATATTGTGCATGGAAATT+TGG | + | chr8_1:85929876-85929895 | Msa1221930:intron | 30.0% | |
| AGTTCTTCATCACCAATTAT+AGG | - | chr8_1:85929927-85929946 | None:intergenic | 30.0% | |
| AAGAACTAAATGTTCCTATG+TGG | + | chr8_1:85929940-85929959 | Msa1221930:CDS | 30.0% | |
| AACAAGAGTAACTCATTTGA+TGG | - | chr8_1:85929987-85930006 | None:intergenic | 30.0% | |
| ! | TGTGTGTATTTTGCAATCTA+TGG | + | chr8_1:85930079-85930098 | Msa1221930:intron | 30.0% |
| ! | TGTATTTTGCAATCTATGGT+AGG | + | chr8_1:85930083-85930102 | Msa1221930:intron | 30.0% |
| CATATGATAAAGGAATTACC+TGG | + | chr8_1:85930200-85930219 | Msa1221930:CDS | 30.0% | |
| TTTATAGGTCCTAATATACC+AGG | - | chr8_1:85924675-85924694 | None:intergenic | 30.0% | |
| ACTAGTTGTTGCATTATAAC+AGG | + | chr8_1:85930523-85930542 | Msa1221930:intron | 30.0% | |
| TATATGTCAGAATCCTTTGA+TGG | + | chr8_1:85930695-85930714 | Msa1221930:CDS | 30.0% | |
| GAAAAACTTTACCTGAGTTT+GGG | - | chr8_1:85930763-85930782 | None:intergenic | 30.0% | |
| TTGAAGTTATCTCATATGAC+AGG | + | chr8_1:85930816-85930835 | Msa1221930:intron | 30.0% | |
| AAACGAGTCATTTATAAGAG+AGG | + | chr8_1:85930936-85930955 | Msa1221930:intron | 30.0% | |
| GTAGATGTGATTCATATACT+TGG | + | chr8_1:85930977-85930996 | Msa1221930:intron | 30.0% | |
| ! | TTGGTGTCTTAAAGTTAGTT+TGG | + | chr8_1:85930996-85931015 | Msa1221930:intron | 30.0% |
| GCATATAACACAATTTCAAG+GGG | + | chr8_1:85931206-85931225 | Msa1221930:CDS | 30.0% | |
| TCTTTGTCTGAAAAACAAGT+TGG | - | chr8_1:85931566-85931585 | None:intergenic | 30.0% | |
| ! | AGTTTGGTAACCTTTACTAT+AGG | - | chr8_1:85931693-85931712 | None:intergenic | 30.0% |
| TAGAGATTTGTCGAGTTATA+AGG | - | chr8_1:85931844-85931863 | None:intergenic | 30.0% | |
| !!! | CCATATACGTGTTTTAATGG+TGG | - | chr8_1:85923104-85923123 | None:intergenic | 35.0% |
| CCACCATTAAAACACGTATA+TGG | + | chr8_1:85923101-85923120 | Msa1221930:intron | 35.0% | |
| GGAGAATAAATGTCCAATAC+AGG | + | chr8_1:85923180-85923199 | Msa1221930:CDS | 35.0% | |
| GAAGCATGACAACTATTGAA+GGG | - | chr8_1:85923247-85923266 | None:intergenic | 35.0% | |
| ! | AGAAGCATGACAACTATTGA+AGG | - | chr8_1:85923248-85923267 | None:intergenic | 35.0% |
| TTAATCCATGACCTCAACAA+TGG | - | chr8_1:85923272-85923291 | None:intergenic | 35.0% | |
| !! | CCGCATGTCTTTAAAATCAT+AGG | + | chr8_1:85923477-85923496 | Msa1221930:intron | 35.0% |
| ! | TTTGAACACATTTGGTGGAT+AGG | + | chr8_1:85923693-85923712 | Msa1221930:intron | 35.0% |
| AACAACCAAATGTTCCTATG+TGG | + | chr8_1:85923749-85923768 | Msa1221930:CDS | 35.0% | |
| AATAGTACAGGATTCCACAT+AGG | - | chr8_1:85923766-85923785 | None:intergenic | 35.0% | |
| AATAGAAGTAGCTCATCTGA+CGG | - | chr8_1:85923796-85923815 | None:intergenic | 35.0% | |
| TGTTCCAATGCTTTAATGTG+TGG | + | chr8_1:85923903-85923922 | Msa1221930:intron | 35.0% | |
| ACTACCACACATTAAAGCAT+TGG | - | chr8_1:85923910-85923929 | None:intergenic | 35.0% | |
| TATGAATCAGCAAGCAAATC+TGG | + | chr8_1:85924132-85924151 | Msa1221930:intron | 35.0% | |
| GAGAATTTGGTCAATGATAC+TGG | + | chr8_1:85924167-85924186 | Msa1221930:intron | 35.0% | |
| CGAAAACATGTAGCATCATA+TGG | + | chr8_1:85924392-85924411 | Msa1221930:intron | 35.0% | |
| CAAAGCCCTTATTCAAATTG+AGG | - | chr8_1:85924452-85924471 | None:intergenic | 35.0% | |
| CTCAATTTGAATAAGGGCTT+TGG | + | chr8_1:85924450-85924469 | Msa1221930:intron | 35.0% | |
| TTAAGTATGCTGATGCGAAA+GGG | - | chr8_1:85924570-85924589 | None:intergenic | 35.0% | |
| ATTAAGTATGCTGATGCGAA+AGG | - | chr8_1:85924571-85924590 | None:intergenic | 35.0% | |
| TTGTTCAATTTCAGATGGAG+TGG | + | chr8_1:85924591-85924610 | Msa1221930:intron | 35.0% | |
| CAGACGATCCACAAATTAAA+TGG | - | chr8_1:85924820-85924839 | None:intergenic | 35.0% | |
| ! | TTTGGAACAACCGCTTAATT+AGG | - | chr8_1:85924895-85924914 | None:intergenic | 35.0% |
| ! | CTAACATTTCAGAGCATCTT+TGG | - | chr8_1:85924913-85924932 | None:intergenic | 35.0% |
| !! | AAGATGCTCTGAAATGTTAG+CGG | + | chr8_1:85924913-85924932 | Msa1221930:intron | 35.0% |
| !!! | GGGGTGACATTTTTTGTTTT+TGG | + | chr8_1:85924934-85924953 | Msa1221930:intron | 35.0% |
| ATTTCAGAATCATCAGATGG+TGG | + | chr8_1:85925120-85925139 | Msa1221930:CDS | 35.0% | |
| AATACCTAGTAAACGAGAGT+AGG | - | chr8_1:85925388-85925407 | None:intergenic | 35.0% | |
| !! | TCTCGTTTACTAGGTATTGA+TGG | + | chr8_1:85925390-85925409 | Msa1221930:intron | 35.0% |
| !! | CTCGTTTACTAGGTATTGAT+GGG | + | chr8_1:85925391-85925410 | Msa1221930:intron | 35.0% |
| !! | TCGTTTACTAGGTATTGATG+GGG | + | chr8_1:85925392-85925411 | Msa1221930:intron | 35.0% |
| ATTCTTCAGCCAAATTGATG+TGG | + | chr8_1:85925776-85925795 | Msa1221930:intron | 35.0% | |
| GTTGTCTGTCTCTAATTACA+TGG | + | chr8_1:85925833-85925852 | Msa1221930:intron | 35.0% | |
| CATTATCAGAACTATCCTAC+TGG | + | chr8_1:85925883-85925902 | Msa1221930:CDS | 35.0% | |
| AGTAAACAAACAGTACCAGT+AGG | - | chr8_1:85925901-85925920 | None:intergenic | 35.0% | |
| CATGGATATAGTTGCAAAAG+TGG | + | chr8_1:85926045-85926064 | Msa1221930:intron | 35.0% | |
| GAGTTTAGAAGAGCTAACTA+TGG | + | chr8_1:85926186-85926205 | Msa1221930:intron | 35.0% | |
| GAGTACTTTCAAATGAGTTC+AGG | + | chr8_1:85926266-85926285 | Msa1221930:intron | 35.0% | |
| TTACTGAGTGTGAAGGATAT+CGG | - | chr8_1:85926307-85926326 | None:intergenic | 35.0% | |
| GTTTCATTTACTGAGTGTGA+AGG | - | chr8_1:85926314-85926333 | None:intergenic | 35.0% | |
| AAATAAAACAGTAGCAGCTC+TGG | + | chr8_1:85926557-85926576 | Msa1221930:intron | 35.0% | |
| ATAGCCGAATATCATAGTAG+TGG | + | chr8_1:85926644-85926663 | Msa1221930:intron | 35.0% | |
| ATCTAGTCTCACTAAAGTTG+TGG | + | chr8_1:85926739-85926758 | Msa1221930:intron | 35.0% | |
| CCAAACCCCAAATATGATAT+AGG | - | chr8_1:85927110-85927129 | None:intergenic | 35.0% | |
| ! | CCTATATCATATTTGGGGTT+TGG | + | chr8_1:85927107-85927126 | Msa1221930:intron | 35.0% |
| GTTAAAAAAACGAGGAGACT+TGG | + | chr8_1:85927192-85927211 | Msa1221930:intron | 35.0% | |
| !! | TGCCCTTGTATAGTTTTACA+AGG | + | chr8_1:85927397-85927416 | Msa1221930:intron | 35.0% |
| !! | GCCCTTGTATAGTTTTACAA+GGG | + | chr8_1:85927398-85927417 | Msa1221930:intron | 35.0% |
| ACGAAGAAGGTTCAAGTAAA+TGG | - | chr8_1:85927574-85927593 | None:intergenic | 35.0% | |
| TACTTGAACCTTCTTCGTAT+TGG | + | chr8_1:85927576-85927595 | Msa1221930:intron | 35.0% | |
| ! | TGAAGAGTTGCTTCACATTT+TGG | + | chr8_1:85927748-85927767 | Msa1221930:intron | 35.0% |
| ! | GAAGAGTTGCTTCACATTTT+GGG | + | chr8_1:85927749-85927768 | Msa1221930:intron | 35.0% |
| ATTATTGTGGCATACCAACA+TGG | - | chr8_1:85927776-85927795 | None:intergenic | 35.0% | |
| !!! | TAGCGGGCCTTTTTTATTTA+AGG | - | chr8_1:85928083-85928102 | None:intergenic | 35.0% |
| AATCCTCAAGGATTATTAGC+GGG | - | chr8_1:85928099-85928118 | None:intergenic | 35.0% | |
| ATCCTTGAGGATTACAAACT+TGG | + | chr8_1:85928106-85928125 | Msa1221930:intron | 35.0% | |
| TTCCAAGTTTGTAATCCTCA+AGG | - | chr8_1:85928111-85928130 | None:intergenic | 35.0% | |
| !! | ACTTGAGTTGGATCCAAATT+TGG | - | chr8_1:85928495-85928514 | None:intergenic | 35.0% |
| TTTCTTCATTGTATTCAGCC+TGG | - | chr8_1:85928545-85928564 | None:intergenic | 35.0% | |
| GGCTGAATACAATGAAGAAA+AGG | + | chr8_1:85928545-85928564 | Msa1221930:intron | 35.0% | |
| AAAGGAAAGAAACAGAGACA+TGG | - | chr8_1:85928772-85928791 | None:intergenic | 35.0% | |
| TAAGAAGGCTATATGGAGAA+AGG | - | chr8_1:85928790-85928809 | None:intergenic | 35.0% | |
| ! | ACACTGCTTACTCATTTTCT+GGG | + | chr8_1:85928826-85928845 | Msa1221930:intron | 35.0% |
| CTAAACTCTACAGAAGTTCA+TGG | + | chr8_1:85929022-85929041 | Msa1221930:CDS | 35.0% | |
| TCTACAGAAGTTCATGGTAA+AGG | + | chr8_1:85929028-85929047 | Msa1221930:CDS | 35.0% | |
| ATGGTAAAGGCTATATACAG+AGG | + | chr8_1:85929041-85929060 | Msa1221930:CDS | 35.0% | |
| GAAGCATGGCAATTATTGAA+GGG | - | chr8_1:85929106-85929125 | None:intergenic | 35.0% | |
| ! | AGAAGCATGGCAATTATTGA+AGG | - | chr8_1:85929107-85929126 | None:intergenic | 35.0% |
| GTAATGTATGACCTCAACAA+TGG | - | chr8_1:85929131-85929150 | None:intergenic | 35.0% | |
| !!! | TTTTTTTCACTAGGTTGGGA+AGG | + | chr8_1:85929230-85929249 | Msa1221930:intron | 35.0% |
| !!! | TTTTTTCACTAGGTTGGGAA+GGG | + | chr8_1:85929231-85929250 | Msa1221930:intron | 35.0% |
| !!! | TTTTTGGTTGCCTATTTTGG+AGG | + | chr8_1:85929258-85929277 | Msa1221930:CDS | 35.0% |
| GTGCATCTGATGTGAAAATA+TGG | + | chr8_1:85929292-85929311 | Msa1221930:CDS | 35.0% | |
| AATATGGTTGCAGACTTACA+AGG | + | chr8_1:85929308-85929327 | Msa1221930:CDS | 35.0% | |
| TGGAAAAAACTTGGTTGAGA+GGG | + | chr8_1:85929473-85929492 | Msa1221930:intron | 35.0% | |
| CCATTGTCAAATCTATATCG+GGG | - | chr8_1:85929528-85929547 | None:intergenic | 35.0% | |
| GCCATTGTCAAATCTATATC+GGG | - | chr8_1:85929529-85929548 | None:intergenic | 35.0% | |
| GGCCATTGTCAAATCTATAT+CGG | - | chr8_1:85929530-85929549 | None:intergenic | 35.0% | |
| ATAAACGCTCCAAGATAGTT+TGG | - | chr8_1:85929630-85929649 | None:intergenic | 35.0% | |
| ! | GTTTTCATAAGTTCTCCCAA+CGG | + | chr8_1:85929687-85929706 | Msa1221930:intron | 35.0% |
| CTCACAAATACTTATGTCAG+TGG | + | chr8_1:85929713-85929732 | Msa1221930:intron | 35.0% | |
| TACAGAGAGGAGATGATATT+GGG | - | chr8_1:85929768-85929787 | None:intergenic | 35.0% | |
| ATACAGAGAGGAGATGATAT+TGG | - | chr8_1:85929769-85929788 | None:intergenic | 35.0% | |
| ! | ATGTTCTAAACTCCAAAGAC+AGG | - | chr8_1:85929809-85929828 | None:intergenic | 35.0% |
| !! | GTCTTTGGAGTTTAGAACAT+TGG | + | chr8_1:85929809-85929828 | Msa1221930:intron | 35.0% |
| ! | TTTGGAGTTTAGAACATTGG+AGG | + | chr8_1:85929812-85929831 | Msa1221930:intron | 35.0% |
| ! | TTGGAGTTTAGAACATTGGA+GGG | + | chr8_1:85929813-85929832 | Msa1221930:intron | 35.0% |
| GCTTGTTTCAATATTGTGCA+TGG | + | chr8_1:85929868-85929887 | Msa1221930:intron | 35.0% | |
| ATTGTGCATGGAAATTTGGT+TGG | + | chr8_1:85929880-85929899 | Msa1221930:intron | 35.0% | |
| ATATGGCAAGCACCTATAAT+TGG | + | chr8_1:85929912-85929931 | Msa1221930:CDS | 35.0% | |
| GAAAATGGTGACTTACTTTG+TGG | + | chr8_1:85930390-85930409 | Msa1221930:CDS | 35.0% | |
| ! | TAACAGGTCACAACAGATTT+TGG | + | chr8_1:85930539-85930558 | Msa1221930:intron | 35.0% |
| !! | CAACAGATTTTGGAAAGACA+TGG | + | chr8_1:85930549-85930568 | Msa1221930:CDS | 35.0% |
| AACTCTACCAATTCCAGTAA+AGG | - | chr8_1:85930675-85930694 | None:intergenic | 35.0% | |
| GGAAAAACTTTACCTGAGTT+TGG | - | chr8_1:85930764-85930783 | None:intergenic | 35.0% | |
| GATGTGTTGGAAAATGTGAA+TGG | + | chr8_1:85930885-85930904 | Msa1221930:intron | 35.0% | |
| ! | TCTTAAAGTTAGTTTGGCGT+TGG | + | chr8_1:85931002-85931021 | Msa1221930:intron | 35.0% |
| GATGGGATTAAGCTTAAAGA+TGG | + | chr8_1:85931170-85931189 | Msa1221930:CDS | 35.0% | |
| ACTTACATTAGAGGATACTG+TGG | + | chr8_1:85931280-85931299 | Msa1221930:CDS | 35.0% | |
| CTTACATTAGAGGATACTGT+GGG | + | chr8_1:85931281-85931300 | Msa1221930:CDS | 35.0% | |
| GCATCATTCTGTAAAAATGC+TGG | + | chr8_1:85931444-85931463 | Msa1221930:intron | 35.0% | |
| GTGCTGTCCAAATAAAAACA+AGG | - | chr8_1:85931511-85931530 | None:intergenic | 35.0% | |
| AAGCCCCAACAAAAAGAAAA+AGG | + | chr8_1:85931655-85931674 | Msa1221930:three_prime_UTR | 35.0% | |
| !!! | AAGTTTTATTTGAGGTCGTC+TGG | - | chr8_1:85931774-85931793 | None:intergenic | 35.0% |
| !! | TGTTGGTTTCTCAAAATCAC+CGG | - | chr8_1:85931873-85931892 | None:intergenic | 35.0% |
| !! | CTCTTTCACTCATTTTGAAG+GGG | - | chr8_1:85931918-85931937 | None:intergenic | 35.0% |
| ! | GCTCTTTCACTCATTTTGAA+GGG | - | chr8_1:85931919-85931938 | None:intergenic | 35.0% |
| AACCTACGAGTACTTGAAGA+AGG | + | chr8_1:85922807-85922826 | Msa1221930:five_prime_UTR | 40.0% | |
| GAGGAGTTAACCTTTCTTGA+AGG | + | chr8_1:85923214-85923233 | Msa1221930:CDS | 40.0% | |
| TCATGCTTCTACCATTGTTG+AGG | + | chr8_1:85923258-85923277 | Msa1221930:CDS | 40.0% | |
| TTCTACCATTGTTGAGGTCA+TGG | + | chr8_1:85923264-85923283 | Msa1221930:intron | 40.0% | |
| !!! | TTATTTTGGGGGTACATCAG+AGG | + | chr8_1:85923390-85923409 | Msa1221930:CDS | 40.0% |
| !! | TATTTTGGGGGTACATCAGA+GGG | + | chr8_1:85923391-85923410 | Msa1221930:CDS | 40.0% |
| TGCAACCATATCTTGACATC+GGG | - | chr8_1:85923421-85923440 | None:intergenic | 40.0% | |
| CTGCAACCATATCTTGACAT+CGG | - | chr8_1:85923422-85923441 | None:intergenic | 40.0% | |
| ! | AACACATTTGGTGGATAGGA+TGG | + | chr8_1:85923697-85923716 | Msa1221930:intron | 40.0% |
| GGTTGTTCATCAGCAATTAC+TGG | - | chr8_1:85923736-85923755 | None:intergenic | 40.0% | |
| GGATTCCACATAGGAACATT+TGG | - | chr8_1:85923757-85923776 | None:intergenic | 40.0% | |
| GACGGAAGTTTGAATAGTAC+AGG | - | chr8_1:85923778-85923797 | None:intergenic | 40.0% | |
| !! | TTGGTCAATGATACTGGCTT+TGG | + | chr8_1:85924173-85924192 | Msa1221930:intron | 40.0% |
| !! | ATTAGCTTTCTCAGTTCTCG+CGG | + | chr8_1:85924227-85924246 | Msa1221930:intron | 40.0% |
| CGGTAGGTAGAAGTAATAAG+AGG | - | chr8_1:85924261-85924280 | None:intergenic | 40.0% | |
| TACTTCTACCTACCGAAATG+TGG | + | chr8_1:85924266-85924285 | Msa1221930:intron | 40.0% | |
| ACAGTTAACCACATTTCGGT+AGG | - | chr8_1:85924277-85924296 | None:intergenic | 40.0% | |
| CTGCACAGTTAACCACATTT+CGG | - | chr8_1:85924281-85924300 | None:intergenic | 40.0% | |
| !! | TAACATGGTGCTATAACAGC+TGG | - | chr8_1:85924526-85924545 | None:intergenic | 40.0% |
| GTCAAACGCTCACATGATAA+AGG | + | chr8_1:85924618-85924637 | Msa1221930:CDS | 40.0% | |
| CAACTTCCTCCTGGTATATT+AGG | + | chr8_1:85924663-85924682 | Msa1221930:CDS | 40.0% | |
| ATAGGTCCTAATATACCAGG+AGG | - | chr8_1:85924672-85924691 | None:intergenic | 40.0% | |
| TGTTGAAAGCTGGAACTCTT+GGG | + | chr8_1:85924838-85924857 | Msa1221930:CDS | 40.0% | |
| TAAAGTTACAACCTCAACCC+AGG | - | chr8_1:85924867-85924886 | None:intergenic | 40.0% | |
| !! | AGATGCTCTGAAATGTTAGC+GGG | + | chr8_1:85924914-85924933 | Msa1221930:intron | 40.0% |
| ! | CTATAGGTCACGTCAGATTT+TGG | + | chr8_1:85924961-85924980 | Msa1221930:intron | 40.0% |
| ACTGGTTGAATCACACTTAG+AGG | - | chr8_1:85925030-85925049 | None:intergenic | 40.0% | |
| GTCTTACTACGATCCTTTGA+TGG | + | chr8_1:85925081-85925100 | Msa1221930:CDS | 40.0% | |
| TACTCTACCAATGCCATCAA+AGG | - | chr8_1:85925097-85925116 | None:intergenic | 40.0% | |
| !! | TATACGAGCTAGGTTGATCA+TGG | + | chr8_1:85925269-85925288 | Msa1221930:intron | 40.0% |
| GTTGCACTTTCTAATGACGA+TGG | + | chr8_1:85925477-85925496 | Msa1221930:CDS | 40.0% | |
| CTAATGACGATGGTGATTCT+TGG | + | chr8_1:85925487-85925506 | Msa1221930:CDS | 40.0% | |
| AGGGTATGAGAATTCCATTC+CGG | - | chr8_1:85925541-85925560 | None:intergenic | 40.0% | |
| TAACCCCCTAATCTGTTCTT+TGG | + | chr8_1:85925744-85925763 | Msa1221930:intron | 40.0% | |
| TGCTGCCAAAGAACAGATTA+GGG | - | chr8_1:85925752-85925771 | None:intergenic | 40.0% | |
| ATGCTGCCAAAGAACAGATT+AGG | - | chr8_1:85925753-85925772 | None:intergenic | 40.0% | |
| GGTTTCACATCCAGAGTAAA+AGG | + | chr8_1:85926511-85926530 | Msa1221930:intron | 40.0% | |
| ! | AGTAGCAGCTCTGGTATATT+TGG | + | chr8_1:85926566-85926585 | Msa1221930:intron | 40.0% |
| CGCTATTGACAACATAGCTT+AGG | - | chr8_1:85926620-85926639 | None:intergenic | 40.0% | |
| TGAGACTAGATTGCTATAGC+GGG | - | chr8_1:85926730-85926749 | None:intergenic | 40.0% | |
| GTGAGACTAGATTGCTATAG+CGG | - | chr8_1:85926731-85926750 | None:intergenic | 40.0% | |
| CTCACTAAAGTTGTGGCTAA+TGG | + | chr8_1:85926746-85926765 | Msa1221930:intron | 40.0% | |
| GAATAGAAGTGAAGATGAGG+CGG | + | chr8_1:85926852-85926871 | Msa1221930:intron | 40.0% | |
| CACCATATGGGATTTCTTGT+GGG | + | chr8_1:85927140-85927159 | Msa1221930:intron | 40.0% | |
| TACCCACAAGAAATCCCATA+TGG | - | chr8_1:85927145-85927164 | None:intergenic | 40.0% | |
| !!! | TTCACATTTTGGGACCATGT+TGG | + | chr8_1:85927759-85927778 | Msa1221930:intron | 40.0% |
| ! | CTTATGGCAGTGTCTCTTTT+GGG | - | chr8_1:85928163-85928182 | None:intergenic | 40.0% |
| ! | TCTTATGGCAGTGTCTCTTT+TGG | - | chr8_1:85928164-85928183 | None:intergenic | 40.0% |
| TCAACACCATGAACAAGACA+TGG | + | chr8_1:85928337-85928356 | Msa1221930:intron | 40.0% | |
| ! | GACTTTCCATGTCTTGTTCA+TGG | - | chr8_1:85928346-85928365 | None:intergenic | 40.0% |
| TCACTTAGTGGGATAAGACT+TGG | - | chr8_1:85928427-85928446 | None:intergenic | 40.0% | |
| ! | AAGTCTTATCCCACTAAGTG+AGG | + | chr8_1:85928426-85928445 | Msa1221930:intron | 40.0% |
| TATAACCGACCTCACTTAGT+GGG | - | chr8_1:85928438-85928457 | None:intergenic | 40.0% | |
| ATATAACCGACCTCACTTAG+TGG | - | chr8_1:85928439-85928458 | None:intergenic | 40.0% | |
| ATGTGCAACGTGTACAACAT+GGG | - | chr8_1:85928687-85928706 | None:intergenic | 40.0% | |
| !! | GACATGGTTGATGATTGGTT+TGG | - | chr8_1:85928756-85928775 | None:intergenic | 40.0% |
| !! | ACAGAGACATGGTTGATGAT+TGG | - | chr8_1:85928761-85928780 | None:intergenic | 40.0% |
| ! | CACACTGCTTACTCATTTTC+TGG | + | chr8_1:85928825-85928844 | Msa1221930:intron | 40.0% |
| !! | TTGAAGGGAACTGATTTTGC+AGG | - | chr8_1:85929091-85929110 | None:intergenic | 40.0% |
| !! | TATTTTGGAGGCACATCAGA+GGG | + | chr8_1:85929270-85929289 | Msa1221930:CDS | 40.0% |
| CACTTTGACCAACCAAATGT+TGG | - | chr8_1:85929395-85929414 | None:intergenic | 40.0% | |
| ! | CAACATTTGGTTGGTCAAAG+TGG | + | chr8_1:85929393-85929412 | Msa1221930:intron | 40.0% |
| ! | TTTGGTTGGTCAAAGTGGTA+AGG | + | chr8_1:85929398-85929417 | Msa1221930:intron | 40.0% |
| ! | TTGGTTGGTCAAAGTGGTAA+GGG | + | chr8_1:85929399-85929418 | Msa1221930:intron | 40.0% |
| CTCTGTGTGTGGAAAAAACT+TGG | + | chr8_1:85929464-85929483 | Msa1221930:intron | 40.0% | |
| GTGGAAAAAACTTGGTTGAG+AGG | + | chr8_1:85929472-85929491 | Msa1221930:intron | 40.0% | |
| GGAAAAAACTTGGTTGAGAG+GGG | + | chr8_1:85929474-85929493 | Msa1221930:intron | 40.0% | |
| CCCCGATATAGATTTGACAA+TGG | + | chr8_1:85929525-85929544 | Msa1221930:intron | 40.0% | |
| AGTATTTGTGAGACTCCGTT+GGG | - | chr8_1:85929705-85929724 | None:intergenic | 40.0% | |
| AAGTATTTGTGAGACTCCGT+TGG | - | chr8_1:85929706-85929725 | None:intergenic | 40.0% | |
| TTGTTTCCTGTTCCTGTCTT+TGG | + | chr8_1:85929794-85929813 | Msa1221930:intron | 40.0% | |
| TAAACTCCAAAGACAGGAAC+AGG | - | chr8_1:85929803-85929822 | None:intergenic | 40.0% | |
| TGGAAATTTGGTTGGCAGAA+TGG | + | chr8_1:85929888-85929907 | Msa1221930:intron | 40.0% | |
| TTGGTTGGCAGAATGGAATA+TGG | + | chr8_1:85929895-85929914 | Msa1221930:intron | 40.0% | |
| AACAGTACAGGATTCCACAT+AGG | - | chr8_1:85929957-85929976 | None:intergenic | 40.0% | |
| GATGGAAGTTTGAACAGTAC+AGG | - | chr8_1:85929969-85929988 | None:intergenic | 40.0% | |
| AAGTTGTTCTCTTTCTGTCC+AGG | - | chr8_1:85930221-85930240 | None:intergenic | 40.0% | |
| CAACTTCCACCTGGTATATT+AGG | + | chr8_1:85930235-85930254 | Msa1221930:CDS | 40.0% | |
| ATAGGTCCTAATATACCAGG+TGG | - | chr8_1:85924672-85924691 | None:intergenic | 40.0% | |
| !! | TTTTGTTTAGCCGATCTTGC+TGG | + | chr8_1:85930368-85930387 | Msa1221930:intron | 40.0% |
| ! | TCACCATTTTCCAGCAAGAT+CGG | - | chr8_1:85930381-85930400 | None:intergenic | 40.0% |
| GGAAAGACATGGAGAAAGTA+TGG | + | chr8_1:85930560-85930579 | Msa1221930:CDS | 40.0% | |
| TTCTTGCTTCGATCCTTTAC+TGG | + | chr8_1:85930659-85930678 | Msa1221930:CDS | 40.0% | |
| CTTCGATCCTTTACTGGAAT+TGG | + | chr8_1:85930665-85930684 | Msa1221930:CDS | 40.0% | |
| ATGTCAGAATCCTTTGATGG+AGG | + | chr8_1:85930698-85930717 | Msa1221930:CDS | 40.0% | |
| CTTTGATGGAGGCAAAACTT+GGG | + | chr8_1:85930709-85930728 | Msa1221930:CDS | 40.0% | |
| TTTGATGGAGGCAAAACTTG+GGG | + | chr8_1:85930710-85930729 | Msa1221930:CDS | 40.0% | |
| ! | TTTGGGTTATGAAGCTGTGT+AGG | - | chr8_1:85930746-85930765 | None:intergenic | 40.0% |
| AAGTGTAGCACAGAACACAT+AGG | - | chr8_1:85930864-85930883 | None:intergenic | 40.0% | |
| TGTGCTACACTTAGATGTGT+TGG | + | chr8_1:85930872-85930891 | Msa1221930:intron | 40.0% | |
| TATCCTCTAATGTAAGTGCC+TGG | - | chr8_1:85931277-85931296 | None:intergenic | 40.0% | |
| ATTAGAGGATACTGTGGGAA+TGG | + | chr8_1:85931286-85931305 | Msa1221930:CDS | 40.0% | |
| CTGTTATCCAAGCTAGTGAT+GGG | + | chr8_1:85931324-85931343 | Msa1221930:CDS | 40.0% | |
| GAGACTATGCTAGGAATAAC+TGG | + | chr8_1:85931732-85931751 | Msa1221930:three_prime_UTR | 40.0% | |
| !! | TTGCAAAAGCATCTGCAACT+TGG | + | chr8_1:85931793-85931812 | Msa1221930:three_prime_UTR | 40.0% |
| ! | GGTGCAACATATTTTTCGCA+AGG | - | chr8_1:85931823-85931842 | None:intergenic | 40.0% |
| AAGAAGTCGTCTTTGCTTGT+TGG | - | chr8_1:85931890-85931909 | None:intergenic | 40.0% | |
| CACCTTCTTCAAGTACTCGT+AGG | - | chr8_1:85922812-85922831 | None:intergenic | 45.0% | |
| GGACTCGCAATCAAACAAGA+AGG | + | chr8_1:85923036-85923055 | Msa1221930:intron | 45.0% | |
| AAGGTTAACTCCTCTACCAG+TGG | - | chr8_1:85923208-85923227 | None:intergenic | 45.0% | |
| !! | ATTTTGGGGGTACATCAGAG+GGG | + | chr8_1:85923392-85923411 | Msa1221930:CDS | 45.0% |
| ! | TTGGTGGATAGGATGGAAGA+TGG | + | chr8_1:85923704-85923723 | Msa1221930:intron | 45.0% |
| ! | TGGTGGATAGGATGGAAGAT+GGG | + | chr8_1:85923705-85923724 | Msa1221930:intron | 45.0% |
| ! | TTAGCTTTCTCAGTTCTCGC+GGG | + | chr8_1:85924228-85924247 | Msa1221930:intron | 45.0% |
| CTGTTGAAAGCTGGAACTCT+TGG | + | chr8_1:85924837-85924856 | Msa1221930:CDS | 45.0% | |
| GTTGAAAGCTGGAACTCTTG+GGG | + | chr8_1:85924839-85924858 | Msa1221930:CDS | 45.0% | |
| !! | GATGCTCTGAAATGTTAGCG+GGG | + | chr8_1:85924915-85924934 | Msa1221930:intron | 45.0% |
| TCTGCAGTCTGATAAGGTAC+TGG | - | chr8_1:85925048-85925067 | None:intergenic | 45.0% | |
| GTACCTTATCAGACTGCAGA+CGG | + | chr8_1:85925048-85925067 | Msa1221930:CDS | 45.0% | |
| TACCTTATCAGACTGCAGAC+GGG | + | chr8_1:85925049-85925068 | Msa1221930:CDS | 45.0% | |
| ! | CTACGATCCTTTGATGGCAT+TGG | + | chr8_1:85925087-85925106 | Msa1221930:CDS | 45.0% |
| ! | TTTGGGTTAGGAAGCTGAGT+AGG | - | chr8_1:85925168-85925187 | None:intergenic | 45.0% |
| CAGCTTCCTAACCCAAATTC+AGG | + | chr8_1:85925171-85925190 | Msa1221930:CDS | 45.0% | |
| GCGCCATTAATACTCGAAAC+AGG | - | chr8_1:85925360-85925379 | None:intergenic | 45.0% | |
| TCCACCTACTCTCGTTTACT+AGG | + | chr8_1:85925381-85925400 | Msa1221930:intron | 45.0% | |
| ACCTAGTAAACGAGAGTAGG+TGG | - | chr8_1:85925385-85925404 | None:intergenic | 45.0% | |
| CGATGGTGATTCTTGGTATG+AGG | + | chr8_1:85925494-85925513 | Msa1221930:CDS | 45.0% | |
| TTGGTATGAGGCTCTCACAT+TGG | + | chr8_1:85925506-85925525 | Msa1221930:CDS | 45.0% | |
| CTCACATTGGAGGATTCTTC+CGG | + | chr8_1:85925519-85925538 | Msa1221930:CDS | 45.0% | |
| ATTGGAGGATTCTTCCGGAA+TGG | + | chr8_1:85925524-85925543 | Msa1221930:CDS | 45.0% | |
| CTGTCATCCAAGCTAGTGAT+GGG | + | chr8_1:85925562-85925581 | Msa1221930:CDS | 45.0% | |
| GTATTAGCCCATCACTAGCT+TGG | - | chr8_1:85925572-85925591 | None:intergenic | 45.0% | |
| CTGCCAAAGAACAGATTAGG+GGG | - | chr8_1:85925750-85925769 | None:intergenic | 45.0% | |
| GCTGCCAAAGAACAGATTAG+GGG | - | chr8_1:85925751-85925770 | None:intergenic | 45.0% | |
| TGTCTACCGTGTTCTGTGTA+AGG | - | chr8_1:85926017-85926036 | None:intergenic | 45.0% | |
| ACGGTAGACAGCTATAGACA+TGG | + | chr8_1:85926027-85926046 | Msa1221930:intron | 45.0% | |
| CAGGCAAAGCAAACTAGACA+AGG | + | chr8_1:85926589-85926608 | Msa1221930:intron | 45.0% | |
| AATTCGCAGTCACTAGAAGG+CGG | - | chr8_1:85926699-85926718 | None:intergenic | 45.0% | |
| TGCAATTCGCAGTCACTAGA+AGG | - | chr8_1:85926702-85926721 | None:intergenic | 45.0% | |
| AGTTGTGGCTAATGGAGATG+AGG | + | chr8_1:85926754-85926773 | Msa1221930:intron | 45.0% | |
| TAATGGAGATGAGGAGTTGG+AGG | + | chr8_1:85926763-85926782 | Msa1221930:intron | 45.0% | |
| GCACCATATGGGATTTCTTG+TGG | + | chr8_1:85927139-85927158 | Msa1221930:intron | 45.0% | |
| CAGTGTCACCGTGATAGTAT+AGG | + | chr8_1:85927325-85927344 | Msa1221930:intron | 45.0% | |
| GACACACTCCAATACGAAGA+AGG | - | chr8_1:85927587-85927606 | None:intergenic | 45.0% | |
| AGATTCATTAACCAGTGCCC+CGG | - | chr8_1:85927896-85927915 | None:intergenic | 45.0% | |
| TGCTTTCTTAACCAATGCCC+CGG | + | chr8_1:85928003-85928022 | Msa1221930:intron | 45.0% | |
| CTTATCCCACTAAGTGAGGT+CGG | + | chr8_1:85928430-85928449 | Msa1221930:intron | 45.0% | |
| CATGTGCAACGTGTACAACA+TGG | - | chr8_1:85928688-85928707 | None:intergenic | 45.0% | |
| CGTTGCACATGTTTGTCTCA+CGG | + | chr8_1:85928697-85928716 | Msa1221930:intron | 45.0% | |
| GTTGCACATGTTTGTCTCAC+GGG | + | chr8_1:85928698-85928717 | Msa1221930:intron | 45.0% | |
| CCTCAACAATGGTAGAAGCA+TGG | - | chr8_1:85923261-85923280 | None:intergenic | 45.0% | |
| CCATGCTTCTACCATTGTTG+AGG | + | chr8_1:85929117-85929136 | Msa1221930:CDS | 45.0% | |
| !!! | GGTTGGGAAGGGTCATTTTT+TGG | + | chr8_1:85929242-85929261 | Msa1221930:intron | 45.0% |
| CTCTGATGTGCCTCCAAAAT+AGG | - | chr8_1:85929271-85929290 | None:intergenic | 45.0% | |
| !! | CTATTTTGGAGGCACATCAG+AGG | + | chr8_1:85929269-85929288 | Msa1221930:CDS | 45.0% |
| !! | TCGAATACTGACTCTGTGTG+TGG | + | chr8_1:85929453-85929472 | Msa1221930:intron | 45.0% |
| AAAAACTTGGTTGAGAGGGG+AGG | + | chr8_1:85929477-85929496 | Msa1221930:intron | 45.0% | |
| GATTTGACAATGGCCCTGTT+TGG | + | chr8_1:85929535-85929554 | Msa1221930:intron | 45.0% | |
| TCAGATGAGCCAATTCTAGC+AGG | + | chr8_1:85929742-85929761 | Msa1221930:intron | 45.0% | |
| GATATTGGGCCTGCTAGAAT+TGG | - | chr8_1:85929754-85929773 | None:intergenic | 45.0% | |
| ! | GAGTTTAGAACATTGGAGGG+AGG | + | chr8_1:85929816-85929835 | Msa1221930:intron | 45.0% |
| GAAAGAGAACAACTTCCACC+TGG | + | chr8_1:85930226-85930245 | Msa1221930:CDS | 45.0% | |
| TAGCCGATCTTGCTGGAAAA+TGG | + | chr8_1:85930375-85930394 | Msa1221930:intron | 45.0% | |
| TGTCGAAAGCTGGAACTCAT+GGG | + | chr8_1:85930419-85930438 | Msa1221930:CDS | 45.0% | |
| ! | ACAGGTTGAATCACACCTAG+AGG | - | chr8_1:85930608-85930627 | None:intergenic | 45.0% |
| TTTGCAGTCTGGTATGGTAC+AGG | - | chr8_1:85930626-85930645 | None:intergenic | 45.0% | |
| TGTACCATACCAGACTGCAA+AGG | + | chr8_1:85930625-85930644 | Msa1221930:CDS | 45.0% | |
| GTACCATACCAGACTGCAAA+GGG | + | chr8_1:85930626-85930645 | Msa1221930:CDS | 45.0% | |
| TACCATACCAGACTGCAAAG+GGG | + | chr8_1:85930627-85930646 | Msa1221930:CDS | 45.0% | |
| ! | CCAAGTTTTGCCTCCATCAA+AGG | - | chr8_1:85930711-85930730 | None:intergenic | 45.0% |
| CCTTTGATGGAGGCAAAACT+TGG | + | chr8_1:85930708-85930727 | Msa1221930:CDS | 45.0% | |
| TTGATGGAGGCAAAACTTGG+GGG | + | chr8_1:85930711-85930730 | Msa1221930:CDS | 45.0% | |
| CAGCTTCATAACCCAAACTC+AGG | + | chr8_1:85930749-85930768 | Msa1221930:CDS | 45.0% | |
| ! | GCTTAAACTTGCTCTCTCAG+AGG | + | chr8_1:85931232-85931251 | Msa1221930:CDS | 45.0% |
| ! | CAGAGGATGATGGTGATTCA+TGG | + | chr8_1:85931249-85931268 | Msa1221930:CDS | 45.0% |
| ! | TCACTAGCTTGGATAACAGC+AGG | - | chr8_1:85931323-85931342 | None:intergenic | 45.0% |
| GCTGTTATCCAAGCTAGTGA+TGG | + | chr8_1:85931323-85931342 | Msa1221930:CDS | 45.0% | |
| ! | TTGGACAGCACGTTGTTGTT+AGG | + | chr8_1:85931520-85931539 | Msa1221930:intron | 45.0% |
| CGACAAATCTCTAACGCAAC+CGG | + | chr8_1:85931851-85931870 | Msa1221930:three_prime_UTR | 45.0% | |
| ATGTCCAATACAGGGACCAC+TGG | + | chr8_1:85923189-85923208 | Msa1221930:CDS | 50.0% | |
| TCTACCAGTGGTCCCTGTAT+TGG | - | chr8_1:85923196-85923215 | None:intergenic | 50.0% | |
| AATACAGGGACCACTGGTAG+AGG | + | chr8_1:85923195-85923214 | Msa1221930:CDS | 50.0% | |
| !! | TTTTGGGGGTACATCAGAGG+GGG | + | chr8_1:85923393-85923412 | Msa1221930:CDS | 50.0% |
| TGTGTGGTAGTTGAGACAGC+TGG | + | chr8_1:85923919-85923938 | Msa1221930:intron | 50.0% | |
| GTGTGGTAGTTGAGACAGCT+GGG | + | chr8_1:85923920-85923939 | Msa1221930:intron | 50.0% | |
| TATAACAGCTGGTGTGGGGA+GGG | - | chr8_1:85924515-85924534 | None:intergenic | 50.0% | |
| GTGCTATAACAGCTGGTGTG+GGG | - | chr8_1:85924519-85924538 | None:intergenic | 50.0% | |
| ! | GGTGCTATAACAGCTGGTGT+GGG | - | chr8_1:85924520-85924539 | None:intergenic | 50.0% |
| !! | TGGTGCTATAACAGCTGGTG+TGG | - | chr8_1:85924521-85924540 | None:intergenic | 50.0% |
| GAAAGAGAGCAACTTCCTCC+TGG | + | chr8_1:85924654-85924673 | Msa1221930:CDS | 50.0% | |
| GTGGATCGTCTGTTGAAAGC+TGG | + | chr8_1:85924828-85924847 | Msa1221930:CDS | 50.0% | |
| !! | AGGTCACGTCAGATTTTGGC+AGG | + | chr8_1:85924965-85924984 | Msa1221930:intron | 50.0% |
| !! | CGTCAGATTTTGGCAGGTCA+TGG | + | chr8_1:85924971-85924990 | Msa1221930:CDS | 50.0% |
| TTCCCGTCTGCAGTCTGATA+AGG | - | chr8_1:85925054-85925073 | None:intergenic | 50.0% | |
| ! | ATCAGATGGTGGCCAGACTT+GGG | + | chr8_1:85925131-85925150 | Msa1221930:CDS | 50.0% |
| GATGGGGTTAAGCTTCGAGA+TGG | + | chr8_1:85925408-85925427 | Msa1221930:CDS | 50.0% | |
| GTATGAGGCTCTCACATTGG+AGG | + | chr8_1:85925509-85925528 | Msa1221930:CDS | 50.0% | |
| ! | CACTAGCTTGGATGACAGCA+GGG | - | chr8_1:85925560-85925579 | None:intergenic | 50.0% |
| ! | TCACTAGCTTGGATGACAGC+AGG | - | chr8_1:85925561-85925580 | None:intergenic | 50.0% |
| GCTGTCATCCAAGCTAGTGA+TGG | + | chr8_1:85925561-85925580 | Msa1221930:CDS | 50.0% | |
| ! | GCAGCTCTGGTATATTTGGC+AGG | + | chr8_1:85926570-85926589 | Msa1221930:intron | 50.0% |
| GGCTAATGGAGATGAGGAGT+TGG | + | chr8_1:85926760-85926779 | Msa1221930:intron | 50.0% | |
| AAGATGAGGCGGACACAGAT+AGG | + | chr8_1:85926863-85926882 | Msa1221930:intron | 50.0% | |
| CGGACACAGATAGGAAAGCA+TGG | + | chr8_1:85926872-85926891 | Msa1221930:intron | 50.0% | |
| ! | ATTTGGGGTTTGGCGCTACA+CGG | + | chr8_1:85927117-85927136 | Msa1221930:intron | 50.0% |
| ATTCATTAACCAGTGCCCCG+GGG | - | chr8_1:85927894-85927913 | None:intergenic | 50.0% | |
| GATTCATTAACCAGTGCCCC+GGG | - | chr8_1:85927895-85927914 | None:intergenic | 50.0% | |
| GCTTTCTTAACCAATGCCCC+GGG | + | chr8_1:85928004-85928023 | Msa1221930:intron | 50.0% | |
| CTTTCTTAACCAATGCCCCG+GGG | + | chr8_1:85928005-85928024 | Msa1221930:intron | 50.0% | |
| TTTCTTAACCAATGCCCCGG+GGG | + | chr8_1:85928006-85928025 | Msa1221930:intron | 50.0% | |
| AGGCCCGCTAATAATCCTTG+AGG | + | chr8_1:85928093-85928112 | Msa1221930:intron | 50.0% | |
| ATGGACAGTGTCAAGCACCT+AGG | - | chr8_1:85928956-85928975 | None:intergenic | 50.0% | |
| GTGGATCTTCTGTCGAAAGC+TGG | + | chr8_1:85930409-85930428 | Msa1221930:CDS | 50.0% | |
| CTGTCGAAAGCTGGAACTCA+TGG | + | chr8_1:85930418-85930437 | Msa1221930:CDS | 50.0% | |
| GTCGAAAGCTGGAACTCATG+GGG | + | chr8_1:85930420-85930439 | Msa1221930:CDS | 50.0% | |
| CTGGAACTCATGGGGATCAT+GGG | + | chr8_1:85930428-85930447 | Msa1221930:CDS | 50.0% | |
| GACTCGCTCATTGTTGCTAC+TGG | + | chr8_1:85931092-85931111 | Msa1221930:intron | 50.0% | |
| CTTGCTCTCTCAGAGGATGA+TGG | + | chr8_1:85931239-85931258 | Msa1221930:CDS | 50.0% | |
| ! | TGATGGTGATTCATGGCACC+AGG | + | chr8_1:85931256-85931275 | Msa1221930:CDS | 50.0% |
| GCACCAGGCACTTACATTAG+AGG | + | chr8_1:85931271-85931290 | Msa1221930:CDS | 50.0% | |
| ! | AGCACGTTGTTGTTAGGCCA+AGG | + | chr8_1:85931526-85931545 | Msa1221930:intron | 50.0% |
| TGGTCTGCAATGCATCACCT+TGG | - | chr8_1:85931546-85931565 | None:intergenic | 50.0% | |
| ACTCGCAGCTGATCGTAGTT+TGG | - | chr8_1:85931709-85931728 | None:intergenic | 50.0% | |
| GGGAGCTGAGCCTTCAAGAA+AGG | - | chr8_1:85923227-85923246 | None:intergenic | 55.0% | |
| GGGCACCCGATGTCAAGATA+TGG | + | chr8_1:85923413-85923432 | Msa1221930:CDS | 55.0% | |
| GTAGTTGAGACAGCTGGGCT+GGG | + | chr8_1:85923925-85923944 | Msa1221930:intron | 55.0% | |
| CTATAACAGCTGGTGTGGGG+AGG | - | chr8_1:85924516-85924535 | None:intergenic | 55.0% | |
| ! | CATCAGATGGTGGCCAGACT+TGG | + | chr8_1:85925130-85925149 | Msa1221930:CDS | 55.0% |
| ! | TCAGATGGTGGCCAGACTTG+GGG | + | chr8_1:85925132-85925151 | Msa1221930:CDS | 55.0% |
| GTTTCGCATGTCCCCAAGTC+TGG | - | chr8_1:85925146-85925165 | None:intergenic | 55.0% | |
| TGGAGATGAGGAGTTGGAGG+TGG | + | chr8_1:85926766-85926785 | Msa1221930:intron | 55.0% | |
| GTCATGTTAACCGGTACCCC+CGG | + | chr8_1:85927874-85927893 | Msa1221930:intron | 55.0% | |
| TCATGTTAACCGGTACCCCC+GGG | + | chr8_1:85927875-85927894 | Msa1221930:intron | 55.0% | |
| TTCATTAACCAGTGCCCCGG+GGG | - | chr8_1:85927893-85927912 | None:intergenic | 55.0% | |
| TAATGTTAACCGGTGCCCCC+GGG | - | chr8_1:85928024-85928043 | None:intergenic | 55.0% | |
| CTAATGTTAACCGGTGCCCC+CGG | - | chr8_1:85928025-85928044 | None:intergenic | 55.0% | |
| GCTGGAACTCATGGGGATCA+TGG | + | chr8_1:85930427-85930446 | Msa1221930:CDS | 55.0% | |
| GTCCCCTTTGCAGTCTGGTA+TGG | - | chr8_1:85930632-85930651 | None:intergenic | 55.0% | |
| GGACTCTCCCATCACTAGCT+TGG | - | chr8_1:85931334-85931353 | None:intergenic | 55.0% | |
| GCGAGTTGCGAGACTATGCT+AGG | + | chr8_1:85931723-85931742 | Msa1221930:three_prime_UTR | 55.0% | |
| GGTAGTTGAGACAGCTGGGC+TGG | + | chr8_1:85923924-85923943 | Msa1221930:intron | 60.0% | |
| GGCAGGTCATGGAGCAAGCA+TGG | + | chr8_1:85924982-85925001 | Msa1221930:CDS | 60.0% | |
| TCACTAGAAGGCGGCTCGTG+GGG | - | chr8_1:85926690-85926709 | None:intergenic | 60.0% | |
| GTCACTAGAAGGCGGCTCGT+GGG | - | chr8_1:85926691-85926710 | None:intergenic | 60.0% | |
| AGTCACTAGAAGGCGGCTCG+TGG | - | chr8_1:85926692-85926711 | None:intergenic | 60.0% | |
| TGGCGCTACACGGCACCATA+TGG | + | chr8_1:85927127-85927146 | Msa1221930:intron | 60.0% | |
| GGCGCTACACGGCACCATAT+GGG | + | chr8_1:85927128-85927147 | Msa1221930:intron | 60.0% | |
| CATGTTAACCGGTACCCCCG+GGG | + | chr8_1:85927876-85927895 | Msa1221930:intron | 60.0% | |
| AATGTTAACCGGTGCCCCCG+GGG | - | chr8_1:85928023-85928042 | None:intergenic | 60.0% | |
| GGTTGAGAGGGGAGGACTCT+CGG | + | chr8_1:85929485-85929504 | Msa1221930:intron | 60.0% | |
| CTCATGGGGATCATGGGCAG+AGG | + | chr8_1:85930434-85930453 | Msa1221930:CDS | 60.0% | |
| GCAGTGTCCCCTTTGCAGTC+TGG | - | chr8_1:85930637-85930656 | None:intergenic | 60.0% | |
| GTGTGGGGAGGGAGGTAAGG+TGG | - | chr8_1:85924504-85924523 | None:intergenic | 65.0% | |
| CTGGTGTGGGGAGGGAGGTA+AGG | - | chr8_1:85924507-85924526 | None:intergenic | 65.0% | |
| AACAGCTGGTGTGGGGAGGG+AGG | - | chr8_1:85924512-85924531 | None:intergenic | 65.0% | |
| ! | CTGGAACTCTTGGGGCGCCT+GGG | + | chr8_1:85924847-85924866 | Msa1221930:CDS | 65.0% |
| ! | GCTGGAACTCTTGGGGCGCC+TGG | + | chr8_1:85924846-85924865 | Msa1221930:CDS | 70.0% |
| ! | CTCTTGGGGCGCCTGGGTTG+AGG | + | chr8_1:85924853-85924872 | Msa1221930:CDS | 70.0% |
| GAAGGCGGCTCGTGGGGAGA+TGG | - | chr8_1:85926684-85926703 | None:intergenic | 70.0% | |
| ! | AACCAGTGCCCCGGGGGTAC+CGG | - | chr8_1:85927887-85927906 | None:intergenic | 70.0% |
| ! | AACCAATGCCCCGGGGGCAC+CGG | + | chr8_1:85928012-85928031 | Msa1221930:intron | 70.0% |
| AACCGGTACCCCCGGGGCAC+TGG | + | chr8_1:85927882-85927901 | Msa1221930:intron | 75.0% | |
| AACCGGTGCCCCCGGGGCAT+TGG | - | chr8_1:85928017-85928036 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 85922755 | 85931938 | 85922755 | ID=Msa1221930;Name=Msa1221930 |
| chr8_1 | mRNA | 85922755 | 85931938 | 85922755 | ID=Msa1221930-mRNA-1;Parent=Msa1221930;Name=Msa1221930-mRNA-1;_AED=0.15;_eAED=0.16;_QI=154|0.87|0.88|1|0.93|0.88|17|387|651 |
| chr8_1 | exon | 85922755 | 85922887 | 85922755 | ID=Msa1221930-mRNA-1:exon:30881;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85923157 | 85923279 | 85923157 | ID=Msa1221930-mRNA-1:exon:30882;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85923364 | 85923450 | 85923364 | ID=Msa1221930-mRNA-1:exon:30883;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85923715 | 85923842 | 85923715 | ID=Msa1221930-mRNA-1:exon:30884;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85924605 | 85924701 | 85924605 | ID=Msa1221930-mRNA-1:exon:30885;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85924797 | 85924874 | 85924797 | ID=Msa1221930-mRNA-1:exon:30886;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85924967 | 85925192 | 85924967 | ID=Msa1221930-mRNA-1:exon:30887;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85925403 | 85925626 | 85925403 | ID=Msa1221930-mRNA-1:exon:30888;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85925873 | 85925904 | 85925873 | ID=Msa1221930-mRNA-1:exon:30889;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85929021 | 85929138 | 85929021 | ID=Msa1221930-mRNA-1:exon:30890;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85929243 | 85929329 | 85929243 | ID=Msa1221930-mRNA-1:exon:30891;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85929906 | 85930033 | 85929906 | ID=Msa1221930-mRNA-1:exon:30892;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85930177 | 85930273 | 85930177 | ID=Msa1221930-mRNA-1:exon:30893;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85930378 | 85930455 | 85930378 | ID=Msa1221930-mRNA-1:exon:30894;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85930545 | 85930770 | 85930545 | ID=Msa1221930-mRNA-1:exon:30895;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85931165 | 85931388 | 85931165 | ID=Msa1221930-mRNA-1:exon:30896;Parent=Msa1221930-mRNA-1 |
| chr8_1 | exon | 85931528 | 85931938 | 85931528 | ID=Msa1221930-mRNA-1:exon:30897;Parent=Msa1221930-mRNA-1 |
| chr8_1 | five_prime_UTR | 85922755 | 85922887 | 85922755 | ID=Msa1221930-mRNA-1:five_prime_utr;Parent=Msa1221930-mRNA-1 |
| chr8_1 | five_prime_UTR | 85923157 | 85923177 | 85923157 | ID=Msa1221930-mRNA-1:five_prime_utr;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85923178 | 85923279 | 85923178 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85923364 | 85923450 | 85923364 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85923715 | 85923842 | 85923715 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85924605 | 85924701 | 85924605 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85924797 | 85924874 | 85924797 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85924967 | 85925192 | 85924967 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85925403 | 85925626 | 85925403 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85925873 | 85925904 | 85925873 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85929021 | 85929138 | 85929021 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85929243 | 85929329 | 85929243 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85929906 | 85930033 | 85929906 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85930177 | 85930273 | 85930177 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85930378 | 85930455 | 85930378 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85930545 | 85930770 | 85930545 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85931165 | 85931388 | 85931165 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | CDS | 85931528 | 85931551 | 85931528 | ID=Msa1221930-mRNA-1:cds;Parent=Msa1221930-mRNA-1 |
| chr8_1 | three_prime_UTR | 85931552 | 85931938 | 85931552 | ID=Msa1221930-mRNA-1:three_prime_utr;Parent=Msa1221930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
