Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820140 | sp|Q9LVE4|CSCL4_ARATH | 75.737 | 746 | 178 | 2 | 1 | 743 | 1 | 746 | 0.0 | 1148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820140 | G7KCP6 | 99.086 | 766 | 7 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002420 | Msa0820140 | 0.834250 | 3.340306e-56 | -8.615850e-47 |
| Msa0716890 | Msa0820140 | 0.808065 | 3.719078e-50 | -8.615850e-47 |
| Msa0739810 | Msa0820140 | 0.970624 | 6.685126e-132 | -8.615850e-47 |
| Msa0758030 | Msa0820140 | 0.845675 | 3.503240e-59 | -8.615850e-47 |
| Msa0820140 | Msa0860620 | 0.895712 | 7.385419e-76 | -8.615850e-47 |
| Msa0820140 | Msa1065890 | 0.815245 | 1.020353e-51 | -8.615850e-47 |
| Msa0820140 | Msa1111430 | 0.808457 | 3.068672e-50 | -8.615850e-47 |
| Msa0820140 | Msa1207190 | 0.842637 | 2.289567e-58 | -8.615850e-47 |
| Msa0820140 | Msa1221930 | 0.824683 | 7.068098e-54 | -8.615850e-47 |
| Msa0820140 | Msa1257440 | 0.833274 | 5.858225e-56 | -8.615850e-47 |
| Msa0820140 | Msa1305250 | 0.843086 | 1.739827e-58 | -8.615850e-47 |
| Msa0416020 | Msa0820140 | 0.811026 | 8.600385e-51 | -8.615850e-47 |
| Msa0276850 | Msa0820140 | 0.818982 | 1.475024e-52 | -8.615850e-47 |
| Msa0276860 | Msa0820140 | 0.830710 | 2.519218e-55 | -8.615850e-47 |
| Msa0309720 | Msa0820140 | 0.825521 | 4.479726e-54 | -8.615850e-47 |
| Msa0508180 | Msa0820140 | 0.804832 | 1.787560e-49 | -8.615850e-47 |
| Msa0574900 | Msa0820140 | 0.800795 | 1.218514e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820140 | MtrunA17_Chr5g0439871 | 99.086 | 766 | 7 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1571 |
| Msa0820140 | MtrunA17_Chr7g0259591 | 65.486 | 762 | 258 | 2 | 1 | 759 | 1 | 760 | 0.0 | 1050 |
| Msa0820140 | MtrunA17_Chr5g0409801 | 62.343 | 717 | 268 | 1 | 1 | 715 | 1 | 717 | 0.0 | 952 |
| Msa0820140 | MtrunA17_Chr4g0075301 | 72.500 | 520 | 139 | 2 | 1 | 517 | 1 | 519 | 0.0 | 780 |
| Msa0820140 | MtrunA17_Chr6g0453641 | 32.578 | 706 | 446 | 11 | 10 | 711 | 9 | 688 | 1.90e-138 | 425 |
| Msa0820140 | MtrunA17_Chr7g0217981 | 31.818 | 726 | 446 | 11 | 12 | 711 | 11 | 713 | 3.02e-129 | 402 |
| Msa0820140 | MtrunA17_Chr4g0042751 | 31.557 | 713 | 452 | 13 | 10 | 715 | 9 | 692 | 4.72e-123 | 385 |
| Msa0820140 | MtrunA17_Chr1g0152031 | 30.000 | 710 | 456 | 9 | 10 | 712 | 9 | 684 | 4.77e-118 | 373 |
| Msa0820140 | MtrunA17_Chr2g0285541 | 31.440 | 722 | 460 | 13 | 19 | 726 | 18 | 718 | 1.63e-114 | 363 |
| Msa0820140 | MtrunA17_Chr4g0075291 | 69.737 | 228 | 66 | 1 | 531 | 755 | 2 | 229 | 8.19e-112 | 339 |
| Msa0820140 | MtrunA17_Chr5g0418061 | 30.404 | 717 | 460 | 13 | 2 | 711 | 5 | 689 | 1.11e-104 | 337 |
| Msa0820140 | MtrunA17_Chr3g0084121 | 34.236 | 406 | 249 | 5 | 300 | 702 | 2 | 392 | 7.64e-72 | 241 |
| Msa0820140 | MtrunA17_Chr3g0135281 | 45.361 | 97 | 51 | 2 | 318 | 413 | 59 | 154 | 4.51e-20 | 87.8 |
| Msa0820140 | MtrunA17_Chr4g0037231 | 86.000 | 50 | 7 | 0 | 106 | 155 | 88 | 137 | 7.37e-20 | 88.6 |
| Msa0820140 | MtrunA17_Chr3g0084131 | 30.000 | 150 | 101 | 3 | 113 | 260 | 57 | 204 | 1.34e-19 | 88.2 |
| Msa0820140 | MtrunA17_Chr3g0135291 | 35.294 | 187 | 112 | 4 | 421 | 605 | 5 | 184 | 1.40e-19 | 87.8 |
| Msa0820140 | MtrunA17_Chr8g0371331 | 21.605 | 648 | 376 | 22 | 86 | 617 | 75 | 706 | 1.07e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820140 | AT3G21620.1 | 75.737 | 746 | 178 | 2 | 1 | 743 | 1 | 746 | 0.0 | 1148 |
| Msa0820140 | AT1G11960.1 | 74.406 | 758 | 185 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1147 |
| Msa0820140 | AT1G11960.3 | 74.406 | 758 | 185 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1147 |
| Msa0820140 | AT4G22120.2 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G22120.4 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G22120.5 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G22120.1 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G22120.6 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G22120.3 | 73.087 | 758 | 199 | 2 | 1 | 753 | 1 | 758 | 0.0 | 1136 |
| Msa0820140 | AT4G15430.2 | 72.715 | 755 | 203 | 1 | 1 | 752 | 1 | 755 | 0.0 | 1133 |
| Msa0820140 | AT4G15430.1 | 72.619 | 756 | 203 | 2 | 1 | 752 | 1 | 756 | 0.0 | 1129 |
| Msa0820140 | AT4G04340.2 | 72.763 | 760 | 202 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0820140 | AT4G04340.1 | 72.763 | 760 | 202 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0820140 | AT4G04340.3 | 72.763 | 760 | 202 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1128 |
| Msa0820140 | AT1G62320.3 | 71.725 | 771 | 213 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1113 |
| Msa0820140 | AT1G62320.5 | 71.725 | 771 | 213 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1113 |
| Msa0820140 | AT1G62320.4 | 71.595 | 771 | 212 | 4 | 1 | 766 | 1 | 769 | 0.0 | 1108 |
| Msa0820140 | AT1G62320.1 | 70.687 | 771 | 212 | 5 | 1 | 766 | 1 | 762 | 0.0 | 1088 |
| Msa0820140 | AT4G02900.4 | 65.476 | 756 | 258 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1032 |
| Msa0820140 | AT4G02900.3 | 65.476 | 756 | 258 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1032 |
| Msa0820140 | AT4G02900.1 | 65.476 | 756 | 258 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1031 |
| Msa0820140 | AT1G11960.2 | 75.987 | 608 | 143 | 1 | 1 | 605 | 1 | 608 | 0.0 | 947 |
| Msa0820140 | AT1G32090.1 | 61.732 | 716 | 271 | 2 | 1 | 713 | 1 | 716 | 0.0 | 912 |
| Msa0820140 | AT1G62320.2 | 74.671 | 608 | 151 | 1 | 1 | 605 | 1 | 608 | 0.0 | 912 |
| Msa0820140 | AT4G02900.2 | 64.706 | 595 | 208 | 2 | 161 | 755 | 1 | 593 | 0.0 | 813 |
| Msa0820140 | AT3G01100.1 | 32.821 | 716 | 449 | 10 | 10 | 719 | 9 | 698 | 4.86e-136 | 419 |
| Msa0820140 | AT3G01100.4 | 32.821 | 716 | 449 | 10 | 10 | 719 | 55 | 744 | 2.96e-135 | 418 |
| Msa0820140 | AT3G01100.3 | 34.983 | 586 | 359 | 7 | 139 | 719 | 15 | 583 | 5.22e-122 | 379 |
| Msa0820140 | AT1G69450.2 | 30.411 | 730 | 471 | 13 | 4 | 725 | 3 | 703 | 5.67e-122 | 382 |
| Msa0820140 | AT1G69450.1 | 30.411 | 730 | 471 | 13 | 4 | 725 | 3 | 703 | 5.67e-122 | 382 |
| Msa0820140 | AT1G69450.3 | 29.326 | 757 | 471 | 14 | 4 | 725 | 3 | 730 | 2.01e-116 | 369 |
| Msa0820140 | AT1G58520.4 | 30.759 | 725 | 477 | 9 | 10 | 731 | 9 | 711 | 1.40e-113 | 361 |
| Msa0820140 | AT1G58520.1 | 30.759 | 725 | 477 | 9 | 10 | 731 | 9 | 711 | 1.40e-113 | 361 |
| Msa0820140 | AT1G58520.7 | 30.759 | 725 | 477 | 9 | 10 | 731 | 9 | 711 | 1.40e-113 | 361 |
| Msa0820140 | AT1G58520.6 | 30.759 | 725 | 477 | 9 | 10 | 731 | 9 | 711 | 1.40e-113 | 361 |
| Msa0820140 | AT1G58520.2 | 30.759 | 725 | 477 | 9 | 10 | 731 | 9 | 711 | 1.40e-113 | 361 |
| Msa0820140 | AT3G01100.2 | 32.721 | 599 | 377 | 8 | 10 | 605 | 9 | 584 | 4.95e-110 | 347 |
| Msa0820140 | AT3G54510.2 | 30.956 | 701 | 451 | 10 | 10 | 707 | 9 | 679 | 2.10e-106 | 342 |
| Msa0820140 | AT1G10090.1 | 29.471 | 699 | 460 | 7 | 10 | 701 | 9 | 681 | 2.27e-103 | 335 |
| Msa0820140 | AT1G30360.1 | 32.555 | 685 | 417 | 11 | 19 | 684 | 18 | 676 | 6.10e-103 | 333 |
| Msa0820140 | AT1G58520.5 | 31.208 | 596 | 395 | 6 | 139 | 731 | 10 | 593 | 2.18e-95 | 310 |
| Msa0820140 | AT3G54510.4 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 5.41e-91 | 298 |
| Msa0820140 | AT3G54510.1 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 5.41e-91 | 298 |
| Msa0820140 | AT3G54510.3 | 31.720 | 599 | 379 | 9 | 10 | 605 | 9 | 580 | 1.02e-88 | 291 |
| Msa0820140 | AT3G54510.5 | 32.207 | 503 | 317 | 8 | 106 | 605 | 4 | 485 | 7.45e-74 | 248 |
| Msa0820140 | AT3G54510.6 | 31.214 | 519 | 331 | 8 | 192 | 707 | 5 | 500 | 1.48e-73 | 249 |
| Msa0820140 | AT4G35870.1 | 21.839 | 435 | 289 | 8 | 86 | 474 | 92 | 521 | 5.67e-13 | 73.2 |
Find 182 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTCATTAATGTGTTTC+TGG | 0.046711 | 5_3:-57371631 | Msa0820140:CDS |
| CACTCTCATTATCACAATTT+TGG | 0.102507 | 5_3:-57376720 | Msa0820140:five_prime_UTR |
| TTCTCAGAAATTCACAATTT+TGG | 0.122166 | 5_3:-57376637 | Msa0820140:five_prime_UTR |
| TATGAAAAGCAAGAAAATTT+TGG | 0.136309 | 5_3:-57370030 | Msa0820140:three_prime_UTR |
| AAACCCTTCATATACCATTT+TGG | 0.198255 | 5_3:+57375766 | None:intergenic |
| GCTGCTGGCATTATAGATTT+AGG | 0.215346 | 5_3:+57372808 | None:intergenic |
| TGTCTCACAACTTCTGTTAA+TGG | 0.225729 | 5_3:-57370791 | Msa0820140:CDS |
| TACTGCAATTGCATTCTTAC+TGG | 0.251039 | 5_3:-57375836 | Msa0820140:CDS |
| CTCCAGCACTCTCATATTCT+TGG | 0.254312 | 5_3:+57370857 | None:intergenic |
| ATGGCTTCACTTGGCGATAT+AGG | 0.259109 | 5_3:-57375883 | Msa0820140:CDS |
| TTTATACAAGGTTTCCTTCC+TGG | 0.259327 | 5_3:-57371774 | Msa0820140:CDS |
| TGATGTTAAACAGGGTAATA+TGG | 0.269521 | 5_3:-57369960 | Msa0820140:three_prime_UTR |
| TGAAACCATATTGTCAAAAC+TGG | 0.272330 | 5_3:+57370715 | None:intergenic |
| CAGAGCCCCGTGACATATAC+TGG | 0.276735 | 5_3:-57372693 | Msa0820140:CDS |
| ATCGAAACACCAATTGTCTT+TGG | 0.283868 | 5_3:+57371411 | None:intergenic |
| CTGTTATGGTCCCTGTCAAT+TGG | 0.290711 | 5_3:-57374737 | Msa0820140:CDS |
| AAATACACCCTATCGTTTAT+AGG | 0.291133 | 5_3:+57375790 | None:intergenic |
| ATCCATAAGGCCAACTAAAA+AGG | 0.297259 | 5_3:-57373406 | Msa0820140:intron |
| AATGGTATATGAAGGGTTTA+AGG | 0.306107 | 5_3:-57375762 | Msa0820140:CDS |
| GTCTCACAACTTCTGTTAAT+GGG | 0.315219 | 5_3:-57370790 | Msa0820140:CDS |
| TGGCTTCACTTGGCGATATA+GGG | 0.323037 | 5_3:-57375882 | Msa0820140:CDS |
| ATAACATTACATTTCAATAA+TGG | 0.324210 | 5_3:+57372513 | None:intergenic |
| TGTTCGATTAGTTCGGGTTC+TGG | 0.324427 | 5_3:+57375637 | None:intergenic |
| ATGAGTGTTTGATGTTAAAC+AGG | 0.328197 | 5_3:-57369969 | Msa0820140:three_prime_UTR |
| ATGAAGAAAGTTGCTTTCAT+TGG | 0.328257 | 5_3:+57371387 | None:intergenic |
| GCAATGGATCCTGGGACTAT+TGG | 0.330247 | 5_3:-57371243 | Msa0820140:CDS |
| AAATCTTTCAAATTGAAGTT+TGG | 0.330467 | 5_3:+57370422 | None:intergenic |
| GCCTGCATGTTCGATTAGTT+CGG | 0.331065 | 5_3:+57375630 | None:intergenic |
| TCTATATACAAAAGAAAATC+TGG | 0.344704 | 5_3:+57370053 | None:intergenic |
| CAGTTCATTAATGTGTTTCT+GGG | 0.345844 | 5_3:-57371630 | Msa0820140:CDS |
| TGTTTCCTTCAAAACTCGTT+GGG | 0.348255 | 5_3:-57372782 | Msa0820140:CDS |
| GACAGATAAGAGCAATATTC+AGG | 0.350558 | 5_3:-57370002 | Msa0820140:three_prime_UTR |
| TATAGGTTGAATCCGGAGTA+TGG | 0.351640 | 5_3:+57375807 | None:intergenic |
| TTATACAAGGTTTCCTTCCT+GGG | 0.352560 | 5_3:-57371773 | Msa0820140:CDS |
| TCAATAAGGAGACTTGTAAT+TGG | 0.363088 | 5_3:-57372640 | Msa0820140:CDS |
| TTTCTTCATAACATACATAA+TGG | 0.366062 | 5_3:-57371373 | Msa0820140:CDS |
| CCTGCATGTTCGATTAGTTC+GGG | 0.370152 | 5_3:+57375631 | None:intergenic |
| CATTTGTGCAGGTACTTGTT+AGG | 0.372092 | 5_3:-57374021 | Msa0820140:intron |
| ATGAGAGTGCTGGAGCATTC+TGG | 0.373825 | 5_3:-57370849 | Msa0820140:CDS |
| AACCACATTTGAACGTTTCA+AGG | 0.375878 | 5_3:+57374704 | None:intergenic |
| AGAAAATGCTAGGAGTGAAA+TGG | 0.384869 | 5_3:+57374758 | None:intergenic |
| AAACTAGAAATCCAACAATA+TGG | 0.385358 | 5_3:-57372732 | Msa0820140:CDS |
| TCACTTAAAGAATTTCTTGT+TGG | 0.388253 | 5_3:-57371292 | Msa0820140:CDS |
| GAATGAATTTATCTAATTGT+TGG | 0.390867 | 5_3:+57371583 | None:intergenic |
| CAGTATATGTCACGGGGCTC+TGG | 0.392278 | 5_3:+57372694 | None:intergenic |
| CATATGTTTCTCTCTCAATA+AGG | 0.392484 | 5_3:-57372654 | Msa0820140:CDS |
| CAACAATATGGTTGACTGAA+TGG | 0.398254 | 5_3:-57372720 | Msa0820140:CDS |
| TTGACTTCAACTCAAATCTA+AGG | 0.398336 | 5_3:+57370190 | None:intergenic |
| GGGACTATTGGTTTCAATAC+AGG | 0.399816 | 5_3:-57371231 | Msa0820140:CDS |
| ACTTATAAACCCTTCGAACT+TGG | 0.400798 | 5_3:+57371698 | None:intergenic |
| CGTGAAGAAGCAATGGATCC+TGG | 0.400945 | 5_3:-57371252 | Msa0820140:CDS |
| CATTCAGTCAACCATATTGT+TGG | 0.403385 | 5_3:+57372721 | None:intergenic |
| GTTTATAAGTCAGTCTTCTC+TGG | 0.406786 | 5_3:-57371685 | Msa0820140:CDS |
| GAAAATGCTAGGAGTGAAAT+GGG | 0.410463 | 5_3:+57374759 | None:intergenic |
| CCAGAAACACATTAATGAAC+TGG | 0.416762 | 5_3:+57371631 | None:intergenic |
| TGAACGTTTCAAGGTGTCAT+TGG | 0.416852 | 5_3:+57374713 | None:intergenic |
| ATACAACTTTATTTCTTGCT+TGG | 0.417063 | 5_3:-57371198 | Msa0820140:CDS |
| CAGGATCCATTGCTTCTTCA+CGG | 0.418998 | 5_3:+57371253 | None:intergenic |
| CAGTCACTTGCTAATATAGA+AGG | 0.422929 | 5_3:-57372565 | Msa0820140:CDS |
| AATTTGTCAATATAGACTTC+AGG | 0.427589 | 5_3:-57375705 | Msa0820140:CDS |
| GTCTCCGTCATCTTTGAAAA+CGG | 0.427813 | 5_3:+57370376 | None:intergenic |
| GATGGATGGGCAGGATGTGC+TGG | 0.429016 | 5_3:-57371348 | Msa0820140:CDS |
| ATATTCCACTTGGATCAAAT+AGG | 0.437664 | 5_3:-57374650 | Msa0820140:intron |
| GACATGATCATCAATATTGT+TGG | 0.439726 | 5_3:+57371720 | None:intergenic |
| AACAATATGGTTGACTGAAT+GGG | 0.447238 | 5_3:-57372719 | Msa0820140:CDS |
| CATACATAAGGTTCTTGAAC+TGG | 0.447815 | 5_3:-57375681 | Msa0820140:CDS |
| AACTTGATCATACCGTGAAT+TGG | 0.448801 | 5_3:+57374174 | None:intergenic |
| GGACATGCTATATCTTGAAA+AGG | 0.449434 | 5_3:-57374259 | Msa0820140:CDS |
| ATAACATACATAATGGTTGA+TGG | 0.452299 | 5_3:-57371366 | Msa0820140:CDS |
| GTGTCATTGGTCCAATTGAC+AGG | 0.457964 | 5_3:+57374726 | None:intergenic |
| TGATCAATATCTAACTCATC+AGG | 0.460224 | 5_3:-57373930 | Msa0820140:intron |
| CAGGTGTGTTCTTCCGCGAC+TGG | 0.464122 | 5_3:+57370291 | None:intergenic |
| TTTCTGGGGAGCATAATTAC+CGG | 0.466924 | 5_3:-57371615 | Msa0820140:CDS |
| TGCAGAATTCCAAAGACAAT+TGG | 0.469700 | 5_3:-57371420 | Msa0820140:intron |
| TCTCCGTCATCTTTGAAAAC+GGG | 0.472289 | 5_3:+57370377 | None:intergenic |
| ATATCTTGTCTACCGTCATC+AGG | 0.473416 | 5_3:-57371112 | Msa0820140:intron |
| ATGATGTATGGAAGTAGAAA+TGG | 0.475585 | 5_3:+57371153 | None:intergenic |
| CTGACTGATTCATCAGCATC+AGG | 0.478193 | 5_3:+57373989 | None:intergenic |
| TGCCCCTCCTTGCAATGGAC+TGG | 0.482980 | 5_3:+57375738 | None:intergenic |
| TTGTTTCCTTCAAAACTCGT+TGG | 0.486952 | 5_3:-57372783 | Msa0820140:CDS |
| TCTGGCATTTGCAATGCAGC+AGG | 0.487520 | 5_3:+57375655 | None:intergenic |
| TACTGGCATTTGCCATACTC+CGG | 0.495772 | 5_3:-57375819 | Msa0820140:CDS |
| AAACAGGGTAATATGGCATA+AGG | 0.496095 | 5_3:-57369953 | Msa0820140:three_prime_UTR |
| TGTTAGTTCAACGCTCAAGC+AGG | 0.497157 | 5_3:+57376759 | None:intergenic |
| TATCGTTTATAGGTTGAATC+CGG | 0.497991 | 5_3:+57375800 | None:intergenic |
| ACAATACGTCCATGGACATC+AGG | 0.498283 | 5_3:+57370826 | None:intergenic |
| ATTCTAGAAACGAATCCATA+AGG | 0.498469 | 5_3:-57373419 | Msa0820140:CDS |
| CGTTAAATTTCAGATAGAGC+TGG | 0.503238 | 5_3:-57372854 | Msa0820140:intron |
| ACTAATCGAACATGCAGGCT+TGG | 0.509292 | 5_3:-57375626 | Msa0820140:CDS |
| CTTAATGACAAGTGCATGGT+TGG | 0.510333 | 5_3:-57370147 | Msa0820140:three_prime_UTR |
| TAATTGTTGGAATGCAGTCC+CGG | 0.510445 | 5_3:+57371596 | None:intergenic |
| CATACATAATGGTTGATGGA+TGG | 0.514476 | 5_3:-57371362 | Msa0820140:CDS |
| GACATGCTATATCTTGAAAA+GGG | 0.520309 | 5_3:-57374258 | Msa0820140:CDS |
| GATCATACCGTGAATTGGTC+AGG | 0.520969 | 5_3:+57374179 | None:intergenic |
| TAGACTTCAGGTCATACATA+AGG | 0.521133 | 5_3:-57375693 | Msa0820140:CDS |
| TTTAAGTGATAAAATATCAA+AGG | 0.523335 | 5_3:+57371306 | None:intergenic |
| TTGAAGGAAACAAAGGCTGC+TGG | 0.523880 | 5_3:+57372793 | None:intergenic |
| TGGATTCTGCTGTATACTTG+AGG | 0.524624 | 5_3:-57375606 | Msa0820140:CDS |
| TGATGAGTTAGATATTGATC+AGG | 0.525466 | 5_3:+57373932 | None:intergenic |
| ACATTTCAATAATGGACTTG+AGG | 0.530070 | 5_3:+57372521 | None:intergenic |
| AGTGACTGTACGAATGCAAT+GGG | 0.531271 | 5_3:+57372580 | None:intergenic |
| TAAATCTATAGACAGATTGA+AGG | 0.531434 | 5_3:-57370117 | Msa0820140:three_prime_UTR |
| ATGATCATGTCCAAGTTCGA+AGG | 0.533063 | 5_3:-57371708 | Msa0820140:CDS |
| TCAATTTCAAATATTCCACT+TGG | 0.533872 | 5_3:-57374660 | Msa0820140:CDS |
| AACCAAGAATATGAGAGTGC+TGG | 0.536287 | 5_3:-57370859 | Msa0820140:CDS |
| TACTTGAGGATCTACTTACT+CGG | 0.536863 | 5_3:-57375592 | Msa0820140:CDS |
| CACCTTGAAACGTTCAAATG+TGG | 0.537370 | 5_3:-57374706 | Msa0820140:CDS |
| CTTATTGAGAGAGAAACATA+TGG | 0.537706 | 5_3:+57372655 | None:intergenic |
| GGTCCAGTCCATTGCAAGGA+GGG | 0.539372 | 5_3:-57375741 | Msa0820140:CDS |
| AGGTCTTTGTGGCAGTAAAG+TGG | 0.540543 | 5_3:-57373234 | Msa0820140:CDS |
| TCTATAGACAGATTGAAGGT+TGG | 0.543525 | 5_3:-57370113 | Msa0820140:three_prime_UTR |
| TCGAAGAACATGGCTTCACT+TGG | 0.545282 | 5_3:-57375892 | Msa0820140:exon |
| CCACTATGTTTGCTAGGCGC+AGG | 0.545840 | 5_3:+57370272 | None:intergenic |
| TCAAGAGTGGAAGGAAGAGC+CGG | 0.545999 | 5_3:-57370333 | Msa0820140:CDS |
| GATAGAGCTGGAGAAAGATA+AGG | 0.546330 | 5_3:-57372842 | Msa0820140:CDS |
| GTTATCCCAGTATATGTCAC+GGG | 0.546554 | 5_3:+57372687 | None:intergenic |
| TTTCCAAAATGGTATATGAA+GGG | 0.546798 | 5_3:-57375769 | Msa0820140:CDS |
| CGGGATGGATATATGCATCA+TGG | 0.546871 | 5_3:+57370396 | None:intergenic |
| AAGAAATAAAGTTGTATCTG+AGG | 0.548593 | 5_3:+57371204 | None:intergenic |
| ACAAATGCCCCTCCTTGCAA+TGG | 0.549030 | 5_3:+57375733 | None:intergenic |
| ATACATAATGGTTGATGGAT+GGG | 0.551192 | 5_3:-57371361 | Msa0820140:CDS |
| ACGCCGTCCTGACCAATTCA+CGG | 0.551285 | 5_3:-57374186 | Msa0820140:intron |
| GGATTCAACCTATAAACGAT+AGG | 0.553075 | 5_3:-57375798 | Msa0820140:CDS |
| ACTGGGAGAGCGATGAGTAA+TGG | 0.553292 | 5_3:+57370733 | None:intergenic |
| GTGAAGAAGCAATGGATCCT+GGG | 0.559253 | 5_3:-57371251 | Msa0820140:CDS |
| TCCAAACAAAACGCCAGTCG+CGG | 0.560248 | 5_3:-57370304 | Msa0820140:CDS |
| GCATTCTGGCCTGATGTCCA+TGG | 0.563003 | 5_3:-57370835 | Msa0820140:CDS |
| GAGCCACCACTATGTTTGCT+AGG | 0.566786 | 5_3:+57370266 | None:intergenic |
| TCAATAATGGACTTGAGGAA+TGG | 0.570509 | 5_3:+57372526 | None:intergenic |
| GTAAGAATGCAATTGCAGTA+AGG | 0.570711 | 5_3:+57375839 | None:intergenic |
| GTCAAGGACTAAGTTCGTGT+TGG | 0.570794 | 5_3:-57370172 | Msa0820140:three_prime_UTR |
| GTTAGTTCAACGCTCAAGCA+GGG | 0.572095 | 5_3:+57376760 | None:intergenic |
| ATAATGGTTGATGGATGGGC+AGG | 0.572967 | 5_3:-57371357 | Msa0820140:CDS |
| TTCTGGGGAGCATAATTACC+GGG | 0.577184 | 5_3:-57371614 | Msa0820140:CDS |
| TGTGATGAGTCAAGAGTGGA+AGG | 0.578062 | 5_3:-57370342 | Msa0820140:CDS |
| TTAGATTTGAGTTGAAGTCA+AGG | 0.578851 | 5_3:-57370188 | Msa0820140:three_prime_UTR |
| AAGTGACTGTACGAATGCAA+TGG | 0.582913 | 5_3:+57372579 | None:intergenic |
| ATCAGTAGTGCCATGCATAG+AGG | 0.583391 | 5_3:+57370235 | None:intergenic |
| GATTCAACCTATAAACGATA+GGG | 0.584151 | 5_3:-57375797 | Msa0820140:CDS |
| AATGGATGAGTAGTAAAAGC+AGG | 0.586318 | 5_3:+57370667 | None:intergenic |
| GTCCAGTCCATTGCAAGGAG+GGG | 0.588634 | 5_3:-57375740 | Msa0820140:CDS |
| GTTTCCTTCAAAACTCGTTG+GGG | 0.588764 | 5_3:-57372781 | Msa0820140:CDS |
| AGTTCATTAATGTGTTTCTG+GGG | 0.590166 | 5_3:-57371629 | Msa0820140:CDS |
| AATAGCTTCAAAGCAATCCC+AGG | 0.590192 | 5_3:+57371756 | None:intergenic |
| TGATCATGTCCAAGTTCGAA+GGG | 0.591481 | 5_3:-57371707 | Msa0820140:CDS |
| GGACCATAACAGAAAATGCT+AGG | 0.593519 | 5_3:+57374748 | None:intergenic |
| AAAAGACCGTGAAGAAGCAA+TGG | 0.595265 | 5_3:-57371259 | Msa0820140:CDS |
| CTGGAAGATGTAATATCTTG+AGG | 0.595341 | 5_3:+57371650 | None:intergenic |
| ATGCAAATACAATACGTCCA+TGG | 0.598039 | 5_3:+57370818 | None:intergenic |
| CGTCATCTTTGAAAACGGGA+TGG | 0.599840 | 5_3:+57370381 | None:intergenic |
| CAAGATATAGCATGTCCAGA+AGG | 0.603409 | 5_3:+57374265 | None:intergenic |
| AGCAATGGTCAAAGACACAT+TGG | 0.604396 | 5_3:-57370459 | Msa0820140:CDS |
| TCATTACAAGCCTCTATGCA+TGG | 0.608855 | 5_3:-57370245 | Msa0820140:CDS |
| GCGTGAACTTCAGGAAGCAA+TGG | 0.614185 | 5_3:-57370474 | Msa0820140:intron |
| TGACATATACTGGGATAACA+TGG | 0.614941 | 5_3:-57372683 | Msa0820140:CDS |
| TGTTATCCCAGTATATGTCA+CGG | 0.616689 | 5_3:+57372686 | None:intergenic |
| GTATTGAAACCAATAGTCCC+AGG | 0.617054 | 5_3:+57371234 | None:intergenic |
| ACTTGAGGATCTACTTACTC+GGG | 0.622654 | 5_3:-57375591 | Msa0820140:intron |
| TTAAGGTCCAGTCCATTGCA+AGG | 0.631853 | 5_3:-57375745 | Msa0820140:CDS |
| ACGTACCTATTTGATCCAAG+TGG | 0.632709 | 5_3:+57374645 | None:intergenic |
| CCCGAACTAATCGAACATGC+AGG | 0.637671 | 5_3:-57375631 | Msa0820140:CDS |
| GAAACCATATTGTCAAAACT+GGG | 0.637941 | 5_3:+57370716 | None:intergenic |
| GCTTCAAAGCAATCCCAGGA+AGG | 0.641603 | 5_3:+57371760 | None:intergenic |
| TGAGTGTTTGATGTTAAACA+GGG | 0.643301 | 5_3:-57369968 | Msa0820140:three_prime_UTR |
| AGCTAATGTTTACCTGATGA+CGG | 0.643360 | 5_3:+57371100 | None:intergenic |
| GAGTTAGATATTGATCAGGA+TGG | 0.644477 | 5_3:+57373936 | None:intergenic |
| AGAGCCCCGTGACATATACT+GGG | 0.645760 | 5_3:-57372692 | Msa0820140:CDS |
| TGATGGTAAATCGAAGAACA+TGG | 0.653853 | 5_3:-57375902 | Msa0820140:exon |
| CCTGCGCCTAGCAAACATAG+TGG | 0.655457 | 5_3:-57370272 | Msa0820140:CDS |
| AGGTCCAGTCCATTGCAAGG+AGG | 0.656275 | 5_3:-57375742 | Msa0820140:CDS |
| GCGCCTAGCAAACATAGTGG+TGG | 0.658614 | 5_3:-57370269 | Msa0820140:CDS |
| GTGATGTGATGAGTCAAGAG+TGG | 0.660535 | 5_3:-57370346 | Msa0820140:CDS |
| TTAGTTCAACGCTCAAGCAG+GGG | 0.670183 | 5_3:+57376761 | None:intergenic |
| GGAGCTTAATGACAAGTGCA+TGG | 0.674311 | 5_3:-57370151 | Msa0820140:three_prime_UTR |
| AATGGACTTGAGGAATGGTG+CGG | 0.681567 | 5_3:+57372531 | None:intergenic |
| TGTCATTGGTCCAATTGACA+GGG | 0.681640 | 5_3:+57374727 | None:intergenic |
| GTGTGACTACAGCATACACA+AGG | 0.702184 | 5_3:+57371175 | None:intergenic |
| ATACCGTGAATTGGTCAGGA+CGG | 0.704095 | 5_3:+57374183 | None:intergenic |
| TTATCCCAGTATATGTCACG+GGG | 0.723719 | 5_3:+57372688 | None:intergenic |
| AAAATGCTAGGAGTGAAATG+GGG | 0.730707 | 5_3:+57374760 | None:intergenic |
| ACTGATTCATCAGCATCAGG+CGG | 0.734704 | 5_3:+57373992 | None:intergenic |
| GATGGATATATGCATCATGG+AGG | 0.742987 | 5_3:+57370399 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCAATTTTAGATTT+TGG | - | chr5_3:57370168-57370187 | Msa0820140:three_prime_UTR | 10.0% |
| !! | TAAAACCAAATAAAAAAAAT+TGG | - | chr5_3:57370218-57370237 | Msa0820140:exon | 10.0% |
| !!! | AAAATCCAATTTTTTTTATT+TGG | + | chr5_3:57370226-57370245 | None:intergenic | 10.0% |
| !! | AAAATAAATGTTATGAAATT+TGG | - | chr5_3:57370288-57370307 | Msa0820140:CDS | 10.0% |
| !! | ATAAATAATAAATCATGTAT+TGG | + | chr5_3:57371231-57371250 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | + | chr5_3:57371379-57371398 | None:intergenic | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | + | chr5_3:57371380-57371399 | None:intergenic | 10.0% |
| !! | TCAACTATTATAAAAAAAAA+GGG | + | chr5_3:57371835-57371854 | None:intergenic | 10.0% |
| !! | ATCAACTATTATAAAAAAAA+AGG | + | chr5_3:57371836-57371855 | None:intergenic | 10.0% |
| !! | TATTATGAAAATCTTAATAA+AGG | - | chr5_3:57373622-57373641 | Msa0820140:intron | 10.0% |
| !! | ATTATGAAAATCTTAATAAA+GGG | - | chr5_3:57373623-57373642 | Msa0820140:intron | 10.0% |
| !! | TAATATAATATGATATTGTA+TGG | - | chr5_3:57374716-57374735 | Msa0820140:CDS | 10.0% |
| !! | AAAAAAAAAAACTAGTAAAG+TGG | + | chr5_3:57370570-57370589 | None:intergenic | 15.0% |
| !! | CAAAAACTTAAAATTAAGTA+AGG | + | chr5_3:57371294-57371313 | None:intergenic | 15.0% |
| !!! | CTTACTTAATTTTAAGTTTT+TGG | - | chr5_3:57371292-57371311 | Msa0820140:CDS | 15.0% |
| !! | AAACCTATTAAAATTAAGTA+AGG | + | chr5_3:57371350-57371369 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr5_3:57371670-57371689 | None:intergenic | 15.0% |
| !! | AAACAAATTTGAATTTAGTA+AGG | - | chr5_3:57371700-57371719 | Msa0820140:CDS | 15.0% |
| !! | AGAATTATGAAAATTAAGTA+AGG | - | chr5_3:57371761-57371780 | Msa0820140:CDS | 15.0% |
| !! | CTTATTCATTTAAATAAACA+AGG | + | chr5_3:57372199-57372218 | None:intergenic | 15.0% |
| !! | ATAAATCTTTATCATAGAAA+CGG | + | chr5_3:57372612-57372631 | None:intergenic | 15.0% |
| !! | ATTTAACTAAAAAACCAATT+TGG | + | chr5_3:57373768-57373787 | None:intergenic | 15.0% |
| !! | ATAACATTACATTTCAATAA+TGG | + | chr5_3:57374207-57374226 | None:intergenic | 15.0% |
| !! | AAAGAGAAAAATGTAATAAA+AGG | + | chr5_3:57374240-57374259 | None:intergenic | 15.0% |
| !!! | TATTACATTTTTCTCTTTAT+TGG | - | chr5_3:57374242-57374261 | Msa0820140:CDS | 15.0% |
| !!! | CTGAATTTTCTATTTATTTA+AGG | + | chr5_3:57374606-57374625 | None:intergenic | 15.0% |
| !! | CTTAAATAAATAGAAAATTC+AGG | - | chr5_3:57374604-57374623 | Msa0820140:intron | 15.0% |
| !! | TTTAAGTGATAAAATATCAA+AGG | + | chr5_3:57375414-57375433 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAATACCTGTAA+TGG | + | chr5_3:57376071-57376090 | None:intergenic | 15.0% |
| !! | TCAAAAAGTTGTAAACTTTA+TGG | + | chr5_3:57369895-57369914 | None:intergenic | 20.0% |
| !!! | TTTATTTTCTTGTTCATCAT+TGG | - | chr5_3:57370243-57370262 | Msa0820140:CDS | 20.0% |
| !!! | ATTGTGATTTTAGTTCATAA+AGG | - | chr5_3:57370343-57370362 | Msa0820140:CDS | 20.0% |
| !!! | TTGTGATTTTAGTTCATAAA+GGG | - | chr5_3:57370344-57370363 | Msa0820140:CDS | 20.0% |
| !!! | TTTTGAAGTGAATTATAGTT+TGG | - | chr5_3:57370415-57370434 | Msa0820140:CDS | 20.0% |
| !! | GAAGAATTGTATGAAATATA+TGG | - | chr5_3:57370500-57370519 | Msa0820140:intron | 20.0% |
| !! | TCACTGTTTATATCATTTAT+TGG | - | chr5_3:57370732-57370751 | Msa0820140:CDS | 20.0% |
| !! | TTGGAAGATTAGAAATTAAA+CGG | - | chr5_3:57370751-57370770 | Msa0820140:CDS | 20.0% |
| !!! | AGTCCTTACTTAATTTTAAT+AGG | - | chr5_3:57371344-57371363 | Msa0820140:CDS | 20.0% |
| !!! | TTTAAAACGACAAAAGTTAA+AGG | - | chr5_3:57371551-57371570 | Msa0820140:intron | 20.0% |
| !!! | TTAGTGCATAAATTTTTTGT+AGG | - | chr5_3:57371731-57371750 | Msa0820140:CDS | 20.0% |
| !!! | TAGTGCATAAATTTTTTGTA+GGG | - | chr5_3:57371732-57371751 | Msa0820140:CDS | 20.0% |
| !!! | AAAAGGGTTAAATATGTTTT+TGG | + | chr5_3:57371819-57371838 | None:intergenic | 20.0% |
| !! | AAACAAATTAATACATCTTC+TGG | - | chr5_3:57372298-57372317 | Msa0820140:intron | 20.0% |
| !! | GAAAAGCTTAACAAATATTT+CGG | + | chr5_3:57372354-57372373 | None:intergenic | 20.0% |
| !! | AAAATATCACTTAAGAGTAA+GGG | + | chr5_3:57373188-57373207 | None:intergenic | 20.0% |
| !! | AAAAATATCACTTAAGAGTA+AGG | + | chr5_3:57373189-57373208 | None:intergenic | 20.0% |
| !!! | TAGAAATACCTTTAAAAAGA+TGG | + | chr5_3:57373395-57373414 | None:intergenic | 20.0% |
| !! | TTATAGTAACTTGATACAAA+AGG | - | chr5_3:57374539-57374558 | Msa0820140:intron | 20.0% |
| !! | ATAATCTTACATTATCTCTT+AGG | + | chr5_3:57374666-57374685 | None:intergenic | 20.0% |
| !! | GAATGAATTTATCTAATTGT+TGG | + | chr5_3:57375137-57375156 | None:intergenic | 20.0% |
| !! | TTTCTTCATAACATACATAA+TGG | - | chr5_3:57375344-57375363 | Msa0820140:intron | 20.0% |
| !!! | TAAACAGAAAGCAATATTTT+AGG | - | chr5_3:57376156-57376175 | Msa0820140:intron | 20.0% |
| !!! | AAACAGAAAGCAATATTTTA+GGG | - | chr5_3:57376157-57376176 | Msa0820140:intron | 20.0% |
| !!! | GAGTTAATTTTCTTTTTTTG+TGG | - | chr5_3:57376219-57376238 | Msa0820140:intron | 20.0% |
| !! | AAATCTTTCAAATTGAAGTT+TGG | + | chr5_3:57376298-57376317 | None:intergenic | 20.0% |
| !! | TCTATATACAAAAGAAAATC+TGG | + | chr5_3:57376667-57376686 | None:intergenic | 20.0% |
| !!! | TATGAAAAGCAAGAAAATTT+TGG | - | chr5_3:57376687-57376706 | Msa0820140:five_prime_UTR | 20.0% |
| !!! | ATGAAAAGCAAGAAAATTTT+GGG | - | chr5_3:57376688-57376707 | Msa0820140:five_prime_UTR | 20.0% |
| !! | TTCTCAGAAATTCACAATTT+TGG | - | chr5_3:57370080-57370099 | Msa0820140:three_prime_UTR | 25.0% |
| ! | CATAAAGGGTTGTTAAAAAT+TGG | - | chr5_3:57370358-57370377 | Msa0820140:CDS | 25.0% |
| ! | GAATTGTATGAAATATATGG+TGG | - | chr5_3:57370503-57370522 | Msa0820140:intron | 25.0% |
| ! | AAAAAAACTAGTAAAGTGGT+GGG | + | chr5_3:57370566-57370585 | None:intergenic | 25.0% |
| ! | AAAAAAAACTAGTAAAGTGG+TGG | + | chr5_3:57370567-57370586 | None:intergenic | 25.0% |
| ! | ATAAAGGTTTAACAACTGAT+TGG | + | chr5_3:57370638-57370657 | None:intergenic | 25.0% |
| !! | TTTTCCAAAATGGTATATGA+AGG | - | chr5_3:57370947-57370966 | Msa0820140:intron | 25.0% |
| ! | TTTCCAAAATGGTATATGAA+GGG | - | chr5_3:57370948-57370967 | Msa0820140:intron | 25.0% |
| ! | AATTTGTCAATATAGACTTC+AGG | - | chr5_3:57371012-57371031 | Msa0820140:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | - | chr5_3:57371308-57371327 | Msa0820140:CDS | 25.0% |
| !! | TAGAAGTTCCCAATTTTATA+GGG | + | chr5_3:57371319-57371338 | None:intergenic | 25.0% |
| !! | TTAGAAGTTCCCAATTTTAT+AGG | + | chr5_3:57371320-57371339 | None:intergenic | 25.0% |
| !!! | AAACAAACTTTGTTTTAGCA+GGG | + | chr5_3:57371411-57371430 | None:intergenic | 25.0% |
| !!! | TAAACAAACTTTGTTTTAGC+AGG | + | chr5_3:57371412-57371431 | None:intergenic | 25.0% |
| ! | AAGGTAAAAGTAACAAAATC+TGG | - | chr5_3:57371570-57371589 | Msa0820140:CDS | 25.0% |
| !!! | AATCTTGCGATAATTTTTTG+TGG | - | chr5_3:57371605-57371624 | Msa0820140:CDS | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr5_3:57371308-57371327 | None:intergenic | 25.0% |
| ! | ATCTTATTCAATTGAATTGC+AGG | - | chr5_3:57371920-57371939 | Msa0820140:intron | 25.0% |
| ! | TCAATTTCAAATATTCCACT+TGG | - | chr5_3:57372057-57372076 | Msa0820140:intron | 25.0% |
| ! | CTAAAATGATAGACTATAGA+TGG | + | chr5_3:57372147-57372166 | None:intergenic | 25.0% |
| !! | ATAGAATTGTTTAGAGTTAG+AGG | + | chr5_3:57372257-57372276 | None:intergenic | 25.0% |
| !! | TTAATACATCTTCTGGTTAT+TGG | - | chr5_3:57372305-57372324 | Msa0820140:intron | 25.0% |
| ! | CTTAACAAATATTTCGGTTA+GGG | + | chr5_3:57372348-57372367 | None:intergenic | 25.0% |
| !! | TCATTACTTATTGCAGATTT+TGG | - | chr5_3:57372401-57372420 | Msa0820140:intron | 25.0% |
| !! | TATGAATTTGAAGTCATAAC+AGG | + | chr5_3:57372937-57372956 | None:intergenic | 25.0% |
| ! | GAGAATTATATCTTGTTAAC+TGG | - | chr5_3:57373030-57373049 | Msa0820140:intron | 25.0% |
| ! | AGAAGAAGAAAAAACAGAAT+TGG | - | chr5_3:57373253-57373272 | Msa0820140:intron | 25.0% |
| !! | AGATTTTCATAATACAAGTG+TGG | + | chr5_3:57373616-57373635 | None:intergenic | 25.0% |
| ! | AAACTAGAAATCCAACAATA+TGG | - | chr5_3:57373985-57374004 | Msa0820140:CDS | 25.0% |
| ! | ATATTGTTGGCAAAAAAATG+AGG | + | chr5_3:57374987-57375006 | None:intergenic | 25.0% |
| ! | ACAGTCATATATATATGCAT+AGG | + | chr5_3:57375188-57375207 | None:intergenic | 25.0% |
| ! | ATTATGAACAAATCATGTAC+AGG | + | chr5_3:57375259-57375278 | None:intergenic | 25.0% |
| ! | ATAACATACATAATGGTTGA+TGG | - | chr5_3:57375351-57375370 | Msa0820140:intron | 25.0% |
| ! | TCACTTAAAGAATTTCTTGT+TGG | - | chr5_3:57375425-57375444 | Msa0820140:intron | 25.0% |
| ! | AAGAAATAAAGTTGTATCTG+AGG | + | chr5_3:57375516-57375535 | None:intergenic | 25.0% |
| !! | ATACAACTTTATTTCTTGCT+TGG | - | chr5_3:57375519-57375538 | Msa0820140:intron | 25.0% |
| !!! | TCGATTTTAATATATGCTCA+TGG | + | chr5_3:57375763-57375782 | None:intergenic | 25.0% |
| ! | TACATGCACTAAAATACTTA+AGG | + | chr5_3:57375789-57375808 | None:intergenic | 25.0% |
| !! | TTTTGACAATATGGTTTCAT+CGG | - | chr5_3:57376006-57376025 | Msa0820140:intron | 25.0% |
| !!! | AACAGAAAGCAATATTTTAG+GGG | - | chr5_3:57376158-57376177 | Msa0820140:intron | 25.0% |
| ! | TAAATCTATAGACAGATTGA+AGG | - | chr5_3:57376600-57376619 | Msa0820140:intron | 25.0% |
| ! | CACTCTCATTATCACAATTT+TGG | - | chr5_3:57369997-57370016 | Msa0820140:three_prime_UTR | 30.0% |
| GAAACAGAAAAAGAAGAGAA+TGG | + | chr5_3:57370042-57370061 | None:intergenic | 30.0% | |
| GGTAATGTACTCTTATGTAA+TGG | - | chr5_3:57370113-57370132 | Msa0820140:three_prime_UTR | 30.0% | |
| !!! | GTTATGCATGTTTTTTTGTG+TGG | - | chr5_3:57370190-57370209 | Msa0820140:three_prime_UTR | 30.0% |
| ! | TTCATCATTGGTTGTTAAGA+TGG | - | chr5_3:57370255-57370274 | Msa0820140:CDS | 30.0% |
| TGAGCTAGATTATGTGAAAA+GGG | - | chr5_3:57370449-57370468 | Msa0820140:CDS | 30.0% | |
| AAAAAACTAGTAAAGTGGTG+GGG | + | chr5_3:57370565-57370584 | None:intergenic | 30.0% | |
| ! | TGAAGAGTTGTATATTTTGC+AGG | - | chr5_3:57370788-57370807 | Msa0820140:CDS | 30.0% |
| ! | GAAGAGTTGTATATTTTGCA+GGG | - | chr5_3:57370789-57370808 | Msa0820140:CDS | 30.0% |
| ! | TATCGTTTATAGGTTGAATC+CGG | + | chr5_3:57370920-57370939 | None:intergenic | 30.0% |
| GATTCAACCTATAAACGATA+GGG | - | chr5_3:57370920-57370939 | Msa0820140:intron | 30.0% | |
| AAATACACCCTATCGTTTAT+AGG | + | chr5_3:57370930-57370949 | None:intergenic | 30.0% | |
| ! | ATAGGGTGTATTTTCCAAAA+TGG | - | chr5_3:57370937-57370956 | Msa0820140:intron | 30.0% |
| ! | AAACCCTTCATATACCATTT+TGG | + | chr5_3:57370954-57370973 | None:intergenic | 30.0% |
| AATGGTATATGAAGGGTTTA+AGG | - | chr5_3:57370955-57370974 | Msa0820140:intron | 30.0% | |
| !! | TAAAGTTTGCAGTTCTGAAT+CGG | - | chr5_3:57371175-57371194 | Msa0820140:CDS | 30.0% |
| ATTGGTTAAAATCTACTCTC+TGG | + | chr5_3:57371213-57371232 | None:intergenic | 30.0% | |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | - | chr5_3:57371307-57371326 | Msa0820140:CDS | 30.0% |
| ! | CATGTTTAGAACACTATGAA+AGG | - | chr5_3:57371474-57371493 | Msa0820140:intron | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | - | chr5_3:57371776-57371795 | Msa0820140:CDS | 30.0% | |
| ! | TTAGAAGGTCCCAATTTTAT+AGG | - | chr5_3:57371791-57371810 | Msa0820140:CDS | 30.0% |
| ! | TAGAAGGTCCCAATTTTATA+GGG | - | chr5_3:57371792-57371811 | Msa0820140:CDS | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr5_3:57371307-57371326 | None:intergenic | 30.0% |
| TCTTGAAACTAGAAAAACGT+AGG | + | chr5_3:57371863-57371882 | None:intergenic | 30.0% | |
| ATATTCCACTTGGATCAAAT+AGG | - | chr5_3:57372067-57372086 | Msa0820140:intron | 30.0% | |
| ! | AAGAAGGTGCAAAAAAAGAA+TGG | + | chr5_3:57372122-57372141 | None:intergenic | 30.0% |
| GCTTAACAAATATTTCGGTT+AGG | + | chr5_3:57372349-57372368 | None:intergenic | 30.0% | |
| TGCAATAAGTAATGAGTTAC+TGG | + | chr5_3:57372396-57372415 | None:intergenic | 30.0% | |
| GACATGCTATATCTTGAAAA+GGG | - | chr5_3:57372459-57372478 | Msa0820140:intron | 30.0% | |
| ! | GCTAGTTGAACATTTCTTTT+TGG | - | chr5_3:57372754-57372773 | Msa0820140:CDS | 30.0% |
| TGATGAGTTAGATATTGATC+AGG | + | chr5_3:57372788-57372807 | None:intergenic | 30.0% | |
| TGATCAATATCTAACTCATC+AGG | - | chr5_3:57372787-57372806 | Msa0820140:CDS | 30.0% | |
| ! | TAATGTTTTCCGATACCTTT+GGG | - | chr5_3:57373073-57373092 | Msa0820140:intron | 30.0% |
| !! | TGAATTTTACCCAAAGGTAT+CGG | + | chr5_3:57373085-57373104 | None:intergenic | 30.0% |
| ! | TTGCATTGAATTTTACCCAA+AGG | + | chr5_3:57373091-57373110 | None:intergenic | 30.0% |
| TCAATGCAAAATAACGATTC+TGG | - | chr5_3:57373102-57373121 | Msa0820140:intron | 30.0% | |
| CAATGCAAAATAACGATTCT+GGG | - | chr5_3:57373103-57373122 | Msa0820140:intron | 30.0% | |
| !! | ATTCTGGGATGAATTCTTAT+TGG | - | chr5_3:57373118-57373137 | Msa0820140:intron | 30.0% |
| GAAAACACAATGAAACAACT+TGG | + | chr5_3:57373166-57373185 | None:intergenic | 30.0% | |
| !! | CTCTTAAGTGATATTTTTGC+AGG | - | chr5_3:57373191-57373210 | Msa0820140:CDS | 30.0% |
| ! | ATTCTAGAAACGAATCCATA+AGG | - | chr5_3:57373298-57373317 | Msa0820140:intron | 30.0% |
| !! | AGATGACATACCTTTTTAGT+TGG | + | chr5_3:57373324-57373343 | None:intergenic | 30.0% |
| AACAGATTTGGAAGATGATT+TGG | + | chr5_3:57373371-57373390 | None:intergenic | 30.0% | |
| TAAAAAGATGGCAACAGATT+TGG | + | chr5_3:57373383-57373402 | None:intergenic | 30.0% | |
| ! | ATCTGTTGCCATCTTTTTAA+AGG | - | chr5_3:57373384-57373403 | Msa0820140:intron | 30.0% |
| AAGCAAAGGTTACAAATATG+AGG | + | chr5_3:57373718-57373737 | None:intergenic | 30.0% | |
| GCAATGATGAAAATAAGCAA+AGG | + | chr5_3:57373732-57373751 | None:intergenic | 30.0% | |
| AACAATATGGTTGACTGAAT+GGG | - | chr5_3:57373998-57374017 | Msa0820140:CDS | 30.0% | |
| CTTATTGAGAGAGAAACATA+TGG | + | chr5_3:57374065-57374084 | None:intergenic | 30.0% | |
| CATATGTTTCTCTCTCAATA+AGG | - | chr5_3:57374063-57374082 | Msa0820140:intron | 30.0% | |
| TCAATAAGGAGACTTGTAAT+TGG | - | chr5_3:57374077-57374096 | Msa0820140:intron | 30.0% | |
| !! | ACATTTCAATAATGGACTTG+AGG | + | chr5_3:57374199-57374218 | None:intergenic | 30.0% |
| AAATACTAATCCCTATGTGT+AGG | - | chr5_3:57374564-57374583 | Msa0820140:intron | 30.0% | |
| TATCTAGTCTGATTACATCA+CGG | - | chr5_3:57374772-57374791 | Msa0820140:CDS | 30.0% | |
| CATAACATTAACATCTACCA+TGG | + | chr5_3:57374890-57374909 | None:intergenic | 30.0% | |
| ! | GTCATCAAGTCTTTTATACA+AGG | - | chr5_3:57374931-57374950 | Msa0820140:intron | 30.0% |
| GACATGATCATCAATATTGT+TGG | + | chr5_3:57375000-57375019 | None:intergenic | 30.0% | |
| CAGTTCATTAATGTGTTTCT+GGG | - | chr5_3:57375087-57375106 | Msa0820140:intron | 30.0% | |
| ! | AGTTCATTAATGTGTTTCTG+GGG | - | chr5_3:57375088-57375107 | Msa0820140:intron | 30.0% |
| GTCATATATATATGCATAGG+AGG | + | chr5_3:57375185-57375204 | None:intergenic | 30.0% | |
| ! | ATGAAGAAAGTTGCTTTCAT+TGG | + | chr5_3:57375333-57375352 | None:intergenic | 30.0% |
| !! | ATACATAATGGTTGATGGAT+GGG | - | chr5_3:57375356-57375375 | Msa0820140:intron | 30.0% |
| ATGATGTATGGAAGTAGAAA+TGG | + | chr5_3:57375567-57375586 | None:intergenic | 30.0% | |
| CCAAAAAAGACAATGATGTA+TGG | + | chr5_3:57375579-57375598 | None:intergenic | 30.0% | |
| !!! | CCATACATCATTGTCTTTTT+TGG | - | chr5_3:57375576-57375595 | Msa0820140:intron | 30.0% |
| !!! | CATCATTGTCTTTTTTGGTT+TGG | - | chr5_3:57375581-57375600 | Msa0820140:intron | 30.0% |
| ! | TATTAATGTCTGAAACTGAC+TGG | - | chr5_3:57375817-57375836 | Msa0820140:CDS | 30.0% |
| GAAACCATATTGTCAAAACT+GGG | + | chr5_3:57376004-57376023 | None:intergenic | 30.0% | |
| TGAAACCATATTGTCAAAAC+TGG | + | chr5_3:57376005-57376024 | None:intergenic | 30.0% | |
| ! | TTTTACTACTCATCCATTAC+AGG | - | chr5_3:57376055-57376074 | Msa0820140:intron | 30.0% |
| ! | AGAAGCATGTTCAAAACATA+GGG | + | chr5_3:57376189-57376208 | None:intergenic | 30.0% |
| ! | AAGAAGCATGTTCAAAACAT+AGG | + | chr5_3:57376190-57376209 | None:intergenic | 30.0% |
| TTGACTTCAACTCAAATCTA+AGG | + | chr5_3:57376530-57376549 | None:intergenic | 30.0% | |
| !! | TTAGATTTGAGTTGAAGTCA+AGG | - | chr5_3:57376529-57376548 | Msa0820140:intron | 30.0% |
| ATGAGTGTTTGATGTTAAAC+AGG | - | chr5_3:57376748-57376767 | Msa0820140:five_prime_UTR | 30.0% | |
| TGAGTGTTTGATGTTAAACA+GGG | - | chr5_3:57376749-57376768 | Msa0820140:five_prime_UTR | 30.0% | |
| TGATGTTAAACAGGGTAATA+TGG | - | chr5_3:57376757-57376776 | Msa0820140:five_prime_UTR | 30.0% | |
| !!! | CACAATTTTGGTGCTACATA+AGG | - | chr5_3:57370092-57370111 | Msa0820140:three_prime_UTR | 35.0% |
| CTGAGCTAGATTATGTGAAA+AGG | - | chr5_3:57370448-57370467 | Msa0820140:CDS | 35.0% | |
| GAAGTAAGACAGTGACATAA+AGG | + | chr5_3:57370654-57370673 | None:intergenic | 35.0% | |
| ! | TATATTTTGCAGGGAGTTGA+TGG | - | chr5_3:57370798-57370817 | Msa0820140:CDS | 35.0% |
| TGATGGTAAATCGAAGAACA+TGG | - | chr5_3:57370815-57370834 | Msa0820140:CDS | 35.0% | |
| GTAAGAATGCAATTGCAGTA+AGG | + | chr5_3:57370881-57370900 | None:intergenic | 35.0% | |
| TACTGCAATTGCATTCTTAC+TGG | - | chr5_3:57370881-57370900 | Msa0820140:intron | 35.0% | |
| GGATTCAACCTATAAACGAT+AGG | - | chr5_3:57370919-57370938 | Msa0820140:intron | 35.0% | |
| TAGACTTCAGGTCATACATA+AGG | - | chr5_3:57371024-57371043 | Msa0820140:intron | 35.0% | |
| CATACATAAGGTTCTTGAAC+TGG | - | chr5_3:57371036-57371055 | Msa0820140:intron | 35.0% | |
| TACTTGAGGATCTACTTACT+CGG | - | chr5_3:57371125-57371144 | Msa0820140:CDS | 35.0% | |
| TTCAGAACTGCAAACTTTAG+AGG | + | chr5_3:57371174-57371193 | None:intergenic | 35.0% | |
| AAAATGCTAGGAGTGAAATG+GGG | + | chr5_3:57371960-57371979 | None:intergenic | 35.0% | |
| GAAAATGCTAGGAGTGAAAT+GGG | + | chr5_3:57371961-57371980 | None:intergenic | 35.0% | |
| AGAAAATGCTAGGAGTGAAA+TGG | + | chr5_3:57371962-57371981 | None:intergenic | 35.0% | |
| ! | ACTCCTAGCATTTTCTGTTA+TGG | - | chr5_3:57371966-57371985 | Msa0820140:intron | 35.0% |
| AACCACATTTGAACGTTTCA+AGG | + | chr5_3:57372016-57372035 | None:intergenic | 35.0% | |
| TAGACTATAGATGGCAAAGA+AGG | + | chr5_3:57372138-57372157 | None:intergenic | 35.0% | |
| !!! | TTCTGGTTATTGGTTTTACG+AGG | - | chr5_3:57372315-57372334 | Msa0820140:intron | 35.0% |
| ! | ATTTTGGACTCACTTGGTAA+TGG | - | chr5_3:57372417-57372436 | Msa0820140:intron | 35.0% |
| GGACATGCTATATCTTGAAA+AGG | - | chr5_3:57372458-57372477 | Msa0820140:intron | 35.0% | |
| AACTTGATCATACCGTGAAT+TGG | + | chr5_3:57372546-57372565 | None:intergenic | 35.0% | |
| GAGTTAGATATTGATCAGGA+TGG | + | chr5_3:57372784-57372803 | None:intergenic | 35.0% | |
| TATGTGCAGTTACAGAAAAC+AGG | + | chr5_3:57372819-57372838 | None:intergenic | 35.0% | |
| ! | GTAATGTTTTCCGATACCTT+TGG | - | chr5_3:57373072-57373091 | Msa0820140:intron | 35.0% |
| ACACAATGAAACAACTTGGT+AGG | + | chr5_3:57373162-57373181 | None:intergenic | 35.0% | |
| ATCCATAAGGCCAACTAAAA+AGG | - | chr5_3:57373311-57373330 | Msa0820140:intron | 35.0% | |
| !!! | TACCTTTTTAGTTGGCCTTA+TGG | + | chr5_3:57373316-57373335 | None:intergenic | 35.0% |
| TGTGACCAACTAGAATTACA+TGG | + | chr5_3:57373440-57373459 | None:intergenic | 35.0% | |
| CGTTAAATTTCAGATAGAGC+TGG | - | chr5_3:57373863-57373882 | Msa0820140:intron | 35.0% | |
| !!! | ACGAGTTTTGAAGGAAACAA+AGG | + | chr5_3:57373934-57373953 | None:intergenic | 35.0% |
| TTGTTTCCTTCAAAACTCGT+TGG | - | chr5_3:57373934-57373953 | Msa0820140:CDS | 35.0% | |
| TGTTTCCTTCAAAACTCGTT+GGG | - | chr5_3:57373935-57373954 | Msa0820140:CDS | 35.0% | |
| CATTCAGTCAACCATATTGT+TGG | + | chr5_3:57373999-57374018 | None:intergenic | 35.0% | |
| CAACAATATGGTTGACTGAA+TGG | - | chr5_3:57373997-57374016 | Msa0820140:CDS | 35.0% | |
| TGTTATCCCAGTATATGTCA+CGG | + | chr5_3:57374034-57374053 | None:intergenic | 35.0% | |
| TGACATATACTGGGATAACA+TGG | - | chr5_3:57374034-57374053 | Msa0820140:intron | 35.0% | |
| ! | CAGTCACTTGCTAATATAGA+AGG | - | chr5_3:57374152-57374171 | Msa0820140:intron | 35.0% |
| !! | TCAATAATGGACTTGAGGAA+TGG | + | chr5_3:57374194-57374213 | None:intergenic | 35.0% |
| TCAATGTAGTCCTACACATA+GGG | + | chr5_3:57374577-57374596 | None:intergenic | 35.0% | |
| TGGAAGTTTATGTCTTTCAC+TGG | - | chr5_3:57374802-57374821 | Msa0820140:intron | 35.0% | |
| ! | CTTTGATAACTGTCTATCCA+TGG | - | chr5_3:57374870-57374889 | Msa0820140:intron | 35.0% |
| TTTATACAAGGTTTCCTTCC+TGG | - | chr5_3:57374943-57374962 | Msa0820140:intron | 35.0% | |
| TTATACAAGGTTTCCTTCCT+GGG | - | chr5_3:57374944-57374963 | Msa0820140:intron | 35.0% | |
| ACTTATAAACCCTTCGAACT+TGG | + | chr5_3:57375022-57375041 | None:intergenic | 35.0% | |
| GTTTATAAGTCAGTCTTCTC+TGG | - | chr5_3:57375032-57375051 | Msa0820140:intron | 35.0% | |
| CTGGAAGATGTAATATCTTG+AGG | + | chr5_3:57375070-57375089 | None:intergenic | 35.0% | |
| CCAGAAACACATTAATGAAC+TGG | + | chr5_3:57375089-57375108 | None:intergenic | 35.0% | |
| CCAGTTCATTAATGTGTTTC+TGG | - | chr5_3:57375086-57375105 | Msa0820140:intron | 35.0% | |
| TGCAGAATTCCAAAGACAAT+TGG | - | chr5_3:57375297-57375316 | Msa0820140:intron | 35.0% | |
| ATCGAAACACCAATTGTCTT+TGG | + | chr5_3:57375309-57375328 | None:intergenic | 35.0% | |
| !! | CATACATAATGGTTGATGGA+TGG | - | chr5_3:57375355-57375374 | Msa0820140:intron | 35.0% |
| AGCTAATGTTTACCTGATGA+CGG | + | chr5_3:57375620-57375639 | None:intergenic | 35.0% | |
| ! | CAACATAGCACTCATTTTCA+TGG | + | chr5_3:57375702-57375721 | None:intergenic | 35.0% |
| ATGTTGTGTGTGTACAACTT+TGG | - | chr5_3:57375716-57375735 | Msa0820140:CDS | 35.0% | |
| ATGCAAATACAATACGTCCA+TGG | + | chr5_3:57375902-57375921 | None:intergenic | 35.0% | |
| TGTCTCACAACTTCTGTTAA+TGG | - | chr5_3:57375926-57375945 | Msa0820140:intron | 35.0% | |
| GTCTCACAACTTCTGTTAAT+GGG | - | chr5_3:57375927-57375946 | Msa0820140:intron | 35.0% | |
| AATGGATGAGTAGTAAAAGC+AGG | + | chr5_3:57376053-57376072 | None:intergenic | 35.0% | |
| !!! | CGTTTTGTTTGGACAATTAC+CGG | + | chr5_3:57376406-57376425 | None:intergenic | 35.0% |
| TCTATAGACAGATTGAAGGT+TGG | - | chr5_3:57376604-57376623 | Msa0820140:intron | 35.0% | |
| GACAGATAAGAGCAATATTC+AGG | - | chr5_3:57376715-57376734 | Msa0820140:five_prime_UTR | 35.0% | |
| AAACAGGGTAATATGGCATA+AGG | - | chr5_3:57376764-57376783 | Msa0820140:five_prime_UTR | 35.0% | |
| ! | TCATTGGTTGTTAAGATGGC+TGG | - | chr5_3:57370259-57370278 | Msa0820140:CDS | 40.0% |
| ! | TATAGGTTGAATCCGGAGTA+TGG | + | chr5_3:57370913-57370932 | None:intergenic | 40.0% |
| TGGATTCTGCTGTATACTTG+AGG | - | chr5_3:57371111-57371130 | Msa0820140:intron | 40.0% | |
| ACTTGAGGATCTACTTACTC+GGG | - | chr5_3:57371126-57371145 | Msa0820140:CDS | 40.0% | |
| GGACCATAACAGAAAATGCT+AGG | + | chr5_3:57371972-57371991 | None:intergenic | 40.0% | |
| TGTCATTGGTCCAATTGACA+GGG | + | chr5_3:57371993-57372012 | None:intergenic | 40.0% | |
| ! | TGAACGTTTCAAGGTGTCAT+TGG | + | chr5_3:57372007-57372026 | None:intergenic | 40.0% |
| CACCTTGAAACGTTCAAATG+TGG | - | chr5_3:57372011-57372030 | Msa0820140:intron | 40.0% | |
| ACGTACCTATTTGATCCAAG+TGG | + | chr5_3:57372075-57372094 | None:intergenic | 40.0% | |
| ! | TTGCAGATTTTGGACTCACT+TGG | - | chr5_3:57372411-57372430 | Msa0820140:intron | 40.0% |
| ! | TGGCTTATGCTTTTACCTTC+TGG | - | chr5_3:57372437-57372456 | Msa0820140:intron | 40.0% |
| CAAGATATAGCATGTCCAGA+AGG | + | chr5_3:57372455-57372474 | None:intergenic | 40.0% | |
| ! | ATTGCTTGAAGAAGGAGCAT+GGG | + | chr5_3:57372669-57372688 | None:intergenic | 40.0% |
| AATTGCTTGAAGAAGGAGCA+TGG | + | chr5_3:57372670-57372689 | None:intergenic | 40.0% | |
| GCACAGTAATTGCTTGAAGA+AGG | + | chr5_3:57372677-57372696 | None:intergenic | 40.0% | |
| CAATTACTGTGCATTTGTGC+AGG | - | chr5_3:57372685-57372704 | Msa0820140:CDS | 40.0% | |
| CATTTGTGCAGGTACTTGTT+AGG | - | chr5_3:57372696-57372715 | Msa0820140:CDS | 40.0% | |
| GTTCATAGAGACAGGATTAC+TGG | + | chr5_3:57373347-57373366 | None:intergenic | 40.0% | |
| ! | GATTTGGAGTTCATAGAGAC+AGG | + | chr5_3:57373355-57373374 | None:intergenic | 40.0% |
| ! | TAGAATTACATGGTGCCAGA+GGG | + | chr5_3:57373430-57373449 | None:intergenic | 40.0% |
| TGGCACCATGTAATTCTAGT+TGG | - | chr5_3:57373432-57373451 | Msa0820140:CDS | 40.0% | |
| !!! | ACTGGCTTTTTAGGTCTTTG+TGG | - | chr5_3:57373472-57373491 | Msa0820140:CDS | 40.0% |
| AGGACACAAGTTCTCTTGTA+TGG | + | chr5_3:57373698-57373717 | None:intergenic | 40.0% | |
| GCTGCTGGCATTATAGATTT+AGG | + | chr5_3:57373912-57373931 | None:intergenic | 40.0% | |
| GTTTCCTTCAAAACTCGTTG+GGG | - | chr5_3:57373936-57373955 | Msa0820140:CDS | 40.0% | |
| TTATCCCAGTATATGTCACG+GGG | + | chr5_3:57374032-57374051 | None:intergenic | 40.0% | |
| GTTATCCCAGTATATGTCAC+GGG | + | chr5_3:57374033-57374052 | None:intergenic | 40.0% | |
| AGTGACTGTACGAATGCAAT+GGG | + | chr5_3:57374140-57374159 | None:intergenic | 40.0% | |
| AAGTGACTGTACGAATGCAA+TGG | + | chr5_3:57374141-57374160 | None:intergenic | 40.0% | |
| AATAGCTTGAACAACCCATC+TGG | - | chr5_3:57374367-57374386 | Msa0820140:intron | 40.0% | |
| ATAGCTTGAACAACCCATCT+GGG | - | chr5_3:57374368-57374387 | Msa0820140:intron | 40.0% | |
| GTCAATGTAGTCCTACACAT+AGG | + | chr5_3:57374578-57374597 | None:intergenic | 40.0% | |
| GATTACATCACGGAATATGC+TGG | - | chr5_3:57374782-57374801 | Msa0820140:intron | 40.0% | |
| AATAGCTTCAAAGCAATCCC+AGG | + | chr5_3:57374964-57374983 | None:intergenic | 40.0% | |
| ATGATCATGTCCAAGTTCGA+AGG | - | chr5_3:57375009-57375028 | Msa0820140:intron | 40.0% | |
| TGATCATGTCCAAGTTCGAA+GGG | - | chr5_3:57375010-57375029 | Msa0820140:intron | 40.0% | |
| ! | TTTCTGGGGAGCATAATTAC+CGG | - | chr5_3:57375102-57375121 | Msa0820140:intron | 40.0% |
| TAATTGTTGGAATGCAGTCC+CGG | + | chr5_3:57375124-57375143 | None:intergenic | 40.0% | |
| !! | GATGTGCTGGTGAGATTTTA+AGG | - | chr5_3:57375382-57375401 | Msa0820140:intron | 40.0% |
| AAAAGACCGTGAAGAAGCAA+TGG | - | chr5_3:57375458-57375477 | Msa0820140:intron | 40.0% | |
| GTATTGAAACCAATAGTCCC+AGG | + | chr5_3:57375486-57375505 | None:intergenic | 40.0% | |
| !! | GGGACTATTGGTTTCAATAC+AGG | - | chr5_3:57375486-57375505 | Msa0820140:intron | 40.0% |
| ATATCTTGTCTACCGTCATC+AGG | - | chr5_3:57375605-57375624 | Msa0820140:CDS | 40.0% | |
| !! | GAAAAGCATCAAAACAGCGA+AGG | + | chr5_3:57375650-57375669 | None:intergenic | 40.0% |
| ! | AACCAAGAATATGAGAGTGC+TGG | - | chr5_3:57375858-57375877 | Msa0820140:CDS | 40.0% |
| !! | CTCTCCCAGTTTTGACAATA+TGG | - | chr5_3:57375997-57376016 | Msa0820140:intron | 40.0% |
| !!! | ATGGTTTCATCGGTTTTGCA+AGG | - | chr5_3:57376016-57376035 | Msa0820140:intron | 40.0% |
| !!! | TGGTTTCATCGGTTTTGCAA+GGG | - | chr5_3:57376017-57376036 | Msa0820140:intron | 40.0% |
| AGCAATGGTCAAAGACACAT+TGG | - | chr5_3:57376258-57376277 | Msa0820140:intron | 40.0% | |
| GATGGATATATGCATCATGG+AGG | + | chr5_3:57376321-57376340 | None:intergenic | 40.0% | |
| ! | CATCCCGTTTTCAAAGATGA+CGG | - | chr5_3:57376337-57376356 | Msa0820140:intron | 40.0% |
| ! | TCTCCGTCATCTTTGAAAAC+GGG | + | chr5_3:57376343-57376362 | None:intergenic | 40.0% |
| ! | GTCTCCGTCATCTTTGAAAA+CGG | + | chr5_3:57376344-57376363 | None:intergenic | 40.0% |
| TCATTACAAGCCTCTATGCA+TGG | - | chr5_3:57376472-57376491 | Msa0820140:intron | 40.0% | |
| CTTAATGACAAGTGCATGGT+TGG | - | chr5_3:57376570-57376589 | Msa0820140:intron | 40.0% | |
| TTAGTTCAACGCTCAAGCAG+GGG | + | chr5_3:57369959-57369978 | None:intergenic | 45.0% | |
| GTTAGTTCAACGCTCAAGCA+GGG | + | chr5_3:57369960-57369979 | None:intergenic | 45.0% | |
| TGTTAGTTCAACGCTCAAGC+AGG | + | chr5_3:57369961-57369980 | None:intergenic | 45.0% | |
| TCGAAGAACATGGCTTCACT+TGG | - | chr5_3:57370825-57370844 | Msa0820140:CDS | 45.0% | |
| ATGGCTTCACTTGGCGATAT+AGG | - | chr5_3:57370834-57370853 | Msa0820140:CDS | 45.0% | |
| TGGCTTCACTTGGCGATATA+GGG | - | chr5_3:57370835-57370854 | Msa0820140:CDS | 45.0% | |
| TACTGGCATTTGCCATACTC+CGG | - | chr5_3:57370898-57370917 | Msa0820140:intron | 45.0% | |
| TTAAGGTCCAGTCCATTGCA+AGG | - | chr5_3:57370972-57370991 | Msa0820140:intron | 45.0% | |
| ! | TGTTCGATTAGTTCGGGTTC+TGG | + | chr5_3:57371083-57371102 | None:intergenic | 45.0% |
| ! | CCTGCATGTTCGATTAGTTC+GGG | + | chr5_3:57371089-57371108 | None:intergenic | 45.0% |
| ! | GCCTGCATGTTCGATTAGTT+CGG | + | chr5_3:57371090-57371109 | None:intergenic | 45.0% |
| ACTAATCGAACATGCAGGCT+TGG | - | chr5_3:57371091-57371110 | Msa0820140:intron | 45.0% | |
| CTGTTATGGTCCCTGTCAAT+TGG | - | chr5_3:57371980-57371999 | Msa0820140:intron | 45.0% | |
| ! | GTGTCATTGGTCCAATTGAC+AGG | + | chr5_3:57371994-57372013 | None:intergenic | 45.0% |
| ATACCGTGAATTGGTCAGGA+CGG | + | chr5_3:57372537-57372556 | None:intergenic | 45.0% | |
| GATCATACCGTGAATTGGTC+AGG | + | chr5_3:57372541-57372560 | None:intergenic | 45.0% | |
| ! | TTGCTTGAAGAAGGAGCATG+GGG | + | chr5_3:57372668-57372687 | None:intergenic | 45.0% |
| ! | ACTGATTCATCAGCATCAGG+CGG | + | chr5_3:57372728-57372747 | None:intergenic | 45.0% |
| ! | CTGACTGATTCATCAGCATC+AGG | + | chr5_3:57372731-57372750 | None:intergenic | 45.0% |
| CCAGATGAAGAGAGGCAATT+AGG | + | chr5_3:57372842-57372861 | None:intergenic | 45.0% | |
| CCTAATTGCCTCTCTTCATC+TGG | - | chr5_3:57372839-57372858 | Msa0820140:CDS | 45.0% | |
| TACAAGCTCCAGATGAAGAG+AGG | + | chr5_3:57372850-57372869 | None:intergenic | 45.0% | |
| CTATTTCCCTTTCTTCCCTC+TGG | - | chr5_3:57373412-57373431 | Msa0820140:CDS | 45.0% | |
| ! | CTAGAATTACATGGTGCCAG+AGG | + | chr5_3:57373431-57373450 | None:intergenic | 45.0% |
| !!! | TGCTTGCAGACTGGCTTTTT+AGG | - | chr5_3:57373463-57373482 | Msa0820140:CDS | 45.0% |
| AGGTCTTTGTGGCAGTAAAG+TGG | - | chr5_3:57373483-57373502 | Msa0820140:CDS | 45.0% | |
| CAGTGCATGCTTCTCCAAAT+TGG | - | chr5_3:57373751-57373770 | Msa0820140:intron | 45.0% | |
| TTGAAGGAAACAAAGGCTGC+TGG | + | chr5_3:57373927-57373946 | None:intergenic | 45.0% | |
| ! | AATGGACTTGAGGAATGGTG+CGG | + | chr5_3:57374189-57374208 | None:intergenic | 45.0% |
| !! | GAGGAGCAAACTCTAAGGTA+AGG | + | chr5_3:57374419-57374438 | None:intergenic | 45.0% |
| CTTGAGAGGAGCAAACTCTA+AGG | + | chr5_3:57374424-57374443 | None:intergenic | 45.0% | |
| ! | CTTAGAGTTTGCTCCTCTCA+AGG | - | chr5_3:57374422-57374441 | Msa0820140:intron | 45.0% |
| ! | ATTCTCCCTGGTGCTAAGTT+TGG | - | chr5_3:57374456-57374475 | Msa0820140:intron | 45.0% |
| ! | TTCTGGGGAGCATAATTACC+GGG | - | chr5_3:57375103-57375122 | Msa0820140:intron | 45.0% |
| !! | ATAATGGTTGATGGATGGGC+AGG | - | chr5_3:57375360-57375379 | Msa0820140:intron | 45.0% |
| CAGGATCCATTGCTTCTTCA+CGG | + | chr5_3:57375467-57375486 | None:intergenic | 45.0% | |
| GTGAAGAAGCAATGGATCCT+GGG | - | chr5_3:57375466-57375485 | Msa0820140:intron | 45.0% | |
| GTGTGACTACAGCATACACA+AGG | + | chr5_3:57375545-57375564 | None:intergenic | 45.0% | |
| CTCCAGCACTCTCATATTCT+TGG | + | chr5_3:57375863-57375882 | None:intergenic | 45.0% | |
| ACAATACGTCCATGGACATC+AGG | + | chr5_3:57375894-57375913 | None:intergenic | 45.0% | |
| ! | TTTTGTGGTGCGTGAACTTC+AGG | - | chr5_3:57376234-57376253 | Msa0820140:intron | 45.0% |
| CGGGATGGATATATGCATCA+TGG | + | chr5_3:57376324-57376343 | None:intergenic | 45.0% | |
| ! | CGTCATCTTTGAAAACGGGA+TGG | + | chr5_3:57376339-57376358 | None:intergenic | 45.0% |
| GTGATGTGATGAGTCAAGAG+TGG | - | chr5_3:57376371-57376390 | Msa0820140:intron | 45.0% | |
| TGTGATGAGTCAAGAGTGGA+AGG | - | chr5_3:57376375-57376394 | Msa0820140:intron | 45.0% | |
| ATCAGTAGTGCCATGCATAG+AGG | + | chr5_3:57376485-57376504 | None:intergenic | 45.0% | |
| GTCAAGGACTAAGTTCGTGT+TGG | - | chr5_3:57376545-57376564 | Msa0820140:intron | 45.0% | |
| GGAGCTTAATGACAAGTGCA+TGG | - | chr5_3:57376566-57376585 | Msa0820140:intron | 45.0% | |
| ACAAATGCCCCTCCTTGCAA+TGG | + | chr5_3:57370987-57371006 | None:intergenic | 50.0% | |
| TCTGGCATTTGCAATGCAGC+AGG | + | chr5_3:57371065-57371084 | None:intergenic | 50.0% | |
| CCCGAACTAATCGAACATGC+AGG | - | chr5_3:57371086-57371105 | Msa0820140:intron | 50.0% | |
| ! | TGCTTGAAGAAGGAGCATGG+GGG | + | chr5_3:57372667-57372686 | None:intergenic | 50.0% |
| ! | ATGGTGCCAGAGGGAAGAAA+GGG | + | chr5_3:57373421-57373440 | None:intergenic | 50.0% |
| GTCACATTGTGCTTGCAGAC+TGG | - | chr5_3:57373454-57373473 | Msa0820140:CDS | 50.0% | |
| !! | AGCACCCCAACGAGTTTTGA+AGG | + | chr5_3:57373943-57373962 | None:intergenic | 50.0% |
| AGAGCCCCGTGACATATACT+GGG | - | chr5_3:57374025-57374044 | Msa0820140:intron | 50.0% | |
| CTTGAACAACCCATCTGGGT+TGG | - | chr5_3:57374372-57374391 | Msa0820140:intron | 50.0% | |
| !! | TTGGTCTCGTGGTGTTGACT+TGG | - | chr5_3:57374391-57374410 | Msa0820140:intron | 50.0% |
| !! | TGGTCTCGTGGTGTTGACTT+GGG | - | chr5_3:57374392-57374411 | Msa0820140:intron | 50.0% |
| TTTGCTCCTCTCAAGGTCTC+AGG | - | chr5_3:57374429-57374448 | Msa0820140:intron | 50.0% | |
| ATCGAACCTGAGACCTTGAG+AGG | + | chr5_3:57374438-57374457 | None:intergenic | 50.0% | |
| ! | TCCCTGGTGCTAAGTTTGGT+GGG | - | chr5_3:57374460-57374479 | Msa0820140:intron | 50.0% |
| GCTTCAAAGCAATCCCAGGA+AGG | + | chr5_3:57374960-57374979 | None:intergenic | 50.0% | |
| CGTGAAGAAGCAATGGATCC+TGG | - | chr5_3:57375465-57375484 | Msa0820140:intron | 50.0% | |
| GCAATGGATCCTGGGACTAT+TGG | - | chr5_3:57375474-57375493 | Msa0820140:intron | 50.0% | |
| !! | ATGAGAGTGCTGGAGCATTC+TGG | - | chr5_3:57375868-57375887 | Msa0820140:CDS | 50.0% |
| ACTGGGAGAGCGATGAGTAA+TGG | + | chr5_3:57375987-57376006 | None:intergenic | 50.0% | |
| GCGTGAACTTCAGGAAGCAA+TGG | - | chr5_3:57376243-57376262 | Msa0820140:intron | 50.0% | |
| TCAAGAGTGGAAGGAAGAGC+CGG | - | chr5_3:57376384-57376403 | Msa0820140:intron | 50.0% | |
| TCCAAACAAAACGCCAGTCG+CGG | - | chr5_3:57376413-57376432 | Msa0820140:intron | 50.0% | |
| GAGCCACCACTATGTTTGCT+AGG | + | chr5_3:57376454-57376473 | None:intergenic | 50.0% | |
| AGGTCCAGTCCATTGCAAGG+AGG | - | chr5_3:57370975-57370994 | Msa0820140:intron | 55.0% | |
| GGTCCAGTCCATTGCAAGGA+GGG | - | chr5_3:57370976-57370995 | Msa0820140:intron | 55.0% | |
| GTCCAGTCCATTGCAAGGAG+GGG | - | chr5_3:57370977-57370996 | Msa0820140:intron | 55.0% | |
| ACGCCGTCCTGACCAATTCA+CGG | - | chr5_3:57372531-57372550 | Msa0820140:CDS | 55.0% | |
| ! | CATGGTGCCAGAGGGAAGAA+AGG | + | chr5_3:57373422-57373441 | None:intergenic | 55.0% |
| CAGTATATGTCACGGGGCTC+TGG | + | chr5_3:57374026-57374045 | None:intergenic | 55.0% | |
| CAGAGCCCCGTGACATATAC+TGG | - | chr5_3:57374024-57374043 | Msa0820140:intron | 55.0% | |
| ACCACGAGACCAACCCAGAT+GGG | + | chr5_3:57374384-57374403 | None:intergenic | 55.0% | |
| GTCTCAGGTTCGATTCTCCC+TGG | - | chr5_3:57374444-57374463 | Msa0820140:intron | 55.0% | |
| ! | CTCCCTGGTGCTAAGTTTGG+TGG | - | chr5_3:57374459-57374478 | Msa0820140:intron | 55.0% |
| GCCCACCAAACTTAGCACCA+GGG | + | chr5_3:57374464-57374483 | None:intergenic | 55.0% | |
| AGCCCACCAAACTTAGCACC+AGG | + | chr5_3:57374465-57374484 | None:intergenic | 55.0% | |
| GCATTCTGGCCTGATGTCCA+TGG | - | chr5_3:57375882-57375901 | Msa0820140:CDS | 55.0% | |
| !! | TCCGCGACTGGCGTTTTGTT+TGG | + | chr5_3:57376417-57376436 | None:intergenic | 55.0% |
| ! | CCACTATGTTTGCTAGGCGC+AGG | + | chr5_3:57376448-57376467 | None:intergenic | 55.0% |
| CCTGCGCCTAGCAAACATAG+TGG | - | chr5_3:57376445-57376464 | Msa0820140:intron | 55.0% | |
| GCGCCTAGCAAACATAGTGG+TGG | - | chr5_3:57376448-57376467 | Msa0820140:intron | 55.0% | |
| TGCCCCTCCTTGCAATGGAC+TGG | + | chr5_3:57370982-57371001 | None:intergenic | 60.0% | |
| !! | ACCCATCTGGGTTGGTCTCG+TGG | - | chr5_3:57374380-57374399 | Msa0820140:intron | 60.0% |
| CACCACGAGACCAACCCAGA+TGG | + | chr5_3:57374385-57374404 | None:intergenic | 60.0% | |
| GATGGATGGGCAGGATGTGC+TGG | - | chr5_3:57375369-57375388 | Msa0820140:intron | 60.0% | |
| CAGGTGTGTTCTTCCGCGAC+TGG | + | chr5_3:57376429-57376448 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 57369890 | 57376849 | 57369890 | ID=Msa0820140;Name=Msa0820140 |
| chr5_3 | mRNA | 57369890 | 57376849 | 57369890 | ID=Msa0820140-mRNA-1;Parent=Msa0820140;Name=Msa0820140-mRNA-1;_AED=0.07;_eAED=0.07;_QI=255|1|1|1|0.90|0.83|12|339|766 |
| chr5_3 | exon | 57369890 | 57370483 | 57369890 | ID=Msa0820140-mRNA-1:exon:17334;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57370663 | 57370896 | 57370663 | ID=Msa0820140-mRNA-1:exon:17333;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57371113 | 57371437 | 57371113 | ID=Msa0820140-mRNA-1:exon:17332;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57371567 | 57371812 | 57371567 | ID=Msa0820140-mRNA-1:exon:17331;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57372523 | 57372863 | 57372523 | ID=Msa0820140-mRNA-1:exon:17330;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57373187 | 57373267 | 57373187 | ID=Msa0820140-mRNA-1:exon:17329;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57373407 | 57373526 | 57373407 | ID=Msa0820140-mRNA-1:exon:17328;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57373931 | 57374032 | 57373931 | ID=Msa0820140-mRNA-1:exon:17327;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57374187 | 57374322 | 57374187 | ID=Msa0820140-mRNA-1:exon:17326;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57374651 | 57374797 | 57374651 | ID=Msa0820140-mRNA-1:exon:17325;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57375592 | 57375931 | 57375592 | ID=Msa0820140-mRNA-1:exon:17324;Parent=Msa0820140-mRNA-1 |
| chr5_3 | exon | 57376621 | 57376849 | 57376621 | ID=Msa0820140-mRNA-1:exon:17323;Parent=Msa0820140-mRNA-1 |
| chr5_3 | five_prime_UTR | 57376621 | 57376849 | 57376621 | ID=Msa0820140-mRNA-1:five_prime_utr;Parent=Msa0820140-mRNA-1 |
| chr5_3 | five_prime_UTR | 57375906 | 57375931 | 57375906 | ID=Msa0820140-mRNA-1:five_prime_utr;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57375592 | 57375905 | 57375592 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57374651 | 57374797 | 57374651 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57374187 | 57374322 | 57374187 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57373931 | 57374032 | 57373931 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57373407 | 57373526 | 57373407 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57373187 | 57373267 | 57373187 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57372523 | 57372863 | 57372523 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57371567 | 57371812 | 57371567 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57371113 | 57371437 | 57371113 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57370663 | 57370896 | 57370663 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | CDS | 57370229 | 57370483 | 57370229 | ID=Msa0820140-mRNA-1:cds;Parent=Msa0820140-mRNA-1 |
| chr5_3 | three_prime_UTR | 57369890 | 57370228 | 57369890 | ID=Msa0820140-mRNA-1:three_prime_utr;Parent=Msa0820140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
