Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223500 | XP_003610453.1 | 97.214 | 646 | 18 | 0 | 1 | 646 | 1 | 646 | 0.0 | 1300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223500 | sp|Q9NYH9|UTP6_HUMAN | 25.378 | 662 | 399 | 20 | 1 | 642 | 1 | 587 | 5.76e-48 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223500 | G7JJ94 | 97.214 | 646 | 18 | 0 | 1 | 646 | 1 | 646 | 0.0 | 1300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1223500 | Msa1277260 | 0.803584 | 3.252010e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223500 | MtrunA17_Chr4g0075081 | 97.214 | 646 | 18 | 0 | 1 | 646 | 1 | 646 | 0.0 | 1300 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1223500 | AT4G28200.1 | 57.645 | 654 | 257 | 5 | 1 | 641 | 1 | 647 | 0.0 | 768 |
Find 164 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGACTTGCATAAAATTTA+AGG | 0.072372 | 8_1:-88013975 | None:intergenic |
| ATATTGGGTTCTTCATCTTT+AGG | 0.158287 | 8_1:-88011794 | None:intergenic |
| TATTGGGTTCTTCATCTTTA+GGG | 0.188228 | 8_1:-88011793 | None:intergenic |
| GGAGATTTCTGTTCTTTCTT+TGG | 0.205138 | 8_1:+88014020 | Msa1223500:CDS |
| TCAGCCATGGTTCACGGTTT+AGG | 0.207464 | 8_1:-88009541 | None:intergenic |
| CAGTGCAGTTATGGGAATTA+AGG | 0.210628 | 8_1:+88011987 | Msa1223500:CDS |
| CCTGAGGAATTAAAATTTCT+TGG | 0.225012 | 8_1:-88011405 | None:intergenic |
| CAGCCATGGTTCACGGTTTA+GGG | 0.248144 | 8_1:-88009540 | None:intergenic |
| ACTTGCTTTGAAGCGTTATA+AGG | 0.272220 | 8_1:+88009870 | Msa1223500:CDS |
| GCAAGCCAGTCCCAGAATTC+TGG | 0.277657 | 8_1:-88011343 | None:intergenic |
| TTTCAACCGAACCAGAATTC+TGG | 0.284378 | 8_1:+88011332 | Msa1223500:CDS |
| TTGTTCTTCTTTGATTCATC+TGG | 0.286830 | 8_1:-88011133 | None:intergenic |
| ATTTGGTCAAAATTTGTCTA+AGG | 0.312536 | 8_1:-88012087 | None:intergenic |
| ATGACCAAAATGTTGACTTT+TGG | 0.312802 | 8_1:+88014382 | Msa1223500:CDS |
| CTCACCCAAGGCAACCTTCC+TGG | 0.322100 | 8_1:-88010990 | None:intergenic |
| CACCATAGACAGTTCGAAAA+AGG | 0.323080 | 8_1:-88011183 | None:intergenic |
| ATCCAAACTCCTGGAACCTT+TGG | 0.324573 | 8_1:-88010818 | None:intergenic |
| GATGAAGAACCCAATATAGA+TGG | 0.325914 | 8_1:+88011800 | Msa1223500:CDS |
| AAGCTTTGCTACCAGTTTCC+TGG | 0.328198 | 8_1:-88011942 | None:intergenic |
| CTTGCCAAAAGTCAACATTT+TGG | 0.336551 | 8_1:-88014386 | None:intergenic |
| AGGCACTTGCAAATCTTGTT+AGG | 0.337032 | 8_1:+88010789 | Msa1223500:intron |
| ACCCAAAGGTTCCAGGAGTT+TGG | 0.341768 | 8_1:+88010816 | Msa1223500:CDS |
| GCCCAACATCAGAAGACCTT+TGG | 0.346201 | 8_1:+88010921 | Msa1223500:CDS |
| TTCCCCTGTATGTTTACTTA+AGG | 0.346833 | 8_1:+88014768 | Msa1223500:three_prime_UTR |
| CTGATTTCGCTGGGTTGGTT+AGG | 0.353723 | 8_1:+88009830 | Msa1223500:CDS |
| GTTCTTTCTTTGGCTAAAGA+TGG | 0.356533 | 8_1:+88014030 | Msa1223500:CDS |
| TGTATGTTTACTTAAGGTAT+TGG | 0.358051 | 8_1:+88014774 | Msa1223500:three_prime_UTR |
| AGGCCAGAGATATCTATAAA+AGG | 0.360971 | 8_1:+88014124 | Msa1223500:CDS |
| TTCTAACTGTTATGTGTTTG+AGG | 0.361711 | 8_1:-88009460 | None:intergenic |
| GTAGGAATCATCAGAGTTGC+AGG | 0.366398 | 8_1:+88014888 | Msa1223500:three_prime_UTR |
| CCCAACATCAGAAGACCTTT+GGG | 0.371717 | 8_1:+88010922 | Msa1223500:CDS |
| TGGTTCACGGTTTAGGGTTA+CGG | 0.374197 | 8_1:-88009534 | None:intergenic |
| TGCAGATTCATATAATTTCC+TGG | 0.375451 | 8_1:-88014349 | None:intergenic |
| TCGTGTCAAGTTGCATTTGT+AGG | 0.377483 | 8_1:+88014870 | Msa1223500:three_prime_UTR |
| ATGACTTGCATAAAATTTAA+GGG | 0.380249 | 8_1:-88013974 | None:intergenic |
| AGTGCAGTTATGGGAATTAA+GGG | 0.388281 | 8_1:+88011988 | Msa1223500:CDS |
| TTGGATTTATGCTGCAGCTT+GGG | 0.391944 | 8_1:+88010835 | Msa1223500:CDS |
| AGCAAATTGAACTTAATTTG+TGG | 0.399786 | 8_1:-88014682 | None:intergenic |
| CTTGCTTTGAAGCGTTATAA+GGG | 0.400112 | 8_1:+88009871 | Msa1223500:CDS |
| TCAGGTGCAAAAGGCAATTC+AGG | 0.402595 | 8_1:+88011423 | Msa1223500:CDS |
| ATGTATGGCCCATCTATATT+GGG | 0.405195 | 8_1:-88011809 | None:intergenic |
| TTCAACCGAACCAGAATTCT+GGG | 0.405346 | 8_1:+88011333 | Msa1223500:CDS |
| AGGTTGCACCCAAAGGTTCC+AGG | 0.405391 | 8_1:+88010809 | Msa1223500:CDS |
| TTTCTAAGATTGAGACTTGA+AGG | 0.405456 | 8_1:-88011223 | None:intergenic |
| AACAAGCTACCGCTGTCTAT+TGG | 0.405697 | 8_1:+88014565 | Msa1223500:CDS |
| ACATTTGCAGTTGAGACAAT+TGG | 0.409596 | 8_1:+88011913 | Msa1223500:CDS |
| ACCTTTGGGTGGAGTATCTT+CGG | 0.410834 | 8_1:+88010936 | Msa1223500:CDS |
| ATTGGATGAGGCCAGGAAAC+TGG | 0.417782 | 8_1:+88011931 | Msa1223500:CDS |
| TATGTATGGCCCATCTATAT+TGG | 0.420247 | 8_1:-88011810 | None:intergenic |
| TCCAAACTCCTGGAACCTTT+GGG | 0.423407 | 8_1:-88010817 | None:intergenic |
| GGTTGCCTTGGGTGAGGATG+AGG | 0.428184 | 8_1:+88010997 | Msa1223500:CDS |
| TTGCAGAATCAGTGCAGTTA+TGG | 0.428214 | 8_1:+88011978 | Msa1223500:CDS |
| CAGCCCTTTCATATATTGAC+AGG | 0.434375 | 8_1:-88011841 | None:intergenic |
| GATGAGGCCGTGTCCGTTGA+AGG | 0.435930 | 8_1:+88009687 | Msa1223500:CDS |
| TTTAATTCCTCAGGTGCAAA+AGG | 0.436231 | 8_1:+88011414 | Msa1223500:CDS |
| TGCAGAATCAGTGCAGTTAT+GGG | 0.443270 | 8_1:+88011979 | Msa1223500:CDS |
| TTTGGATTTATGCTGCAGCT+TGG | 0.446702 | 8_1:+88010834 | Msa1223500:CDS |
| GGATAACAAATCAGTATCAC+TGG | 0.447213 | 8_1:-88012053 | None:intergenic |
| CCCAAAGGTCTTCTGATGTT+GGG | 0.447510 | 8_1:-88010922 | None:intergenic |
| AAATCGAAATCTGATTTCGC+TGG | 0.453923 | 8_1:+88009820 | Msa1223500:CDS |
| GCTTTGAAAAGTGTGCCTTC+AGG | 0.457241 | 8_1:+88011725 | Msa1223500:CDS |
| GGCTGCGCTGAACAATCTCT+TGG | 0.459090 | 8_1:-88009497 | None:intergenic |
| ACCCAAAGGTCTTCTGATGT+TGG | 0.461135 | 8_1:-88010923 | None:intergenic |
| GAAGCAAACCTTGCATCAAT+AGG | 0.462444 | 8_1:+88014303 | Msa1223500:CDS |
| TCATGTGTATTCTTATACAC+TGG | 0.464101 | 8_1:+88014819 | Msa1223500:three_prime_UTR |
| TTTGTCTAAGGAGTTCGAAA+AGG | 0.466162 | 8_1:-88012075 | None:intergenic |
| AATACCTTAAGTAAACATAC+AGG | 0.467470 | 8_1:-88014772 | None:intergenic |
| TTGTCTCAACTGCAAATGTA+AGG | 0.468804 | 8_1:-88011909 | None:intergenic |
| ATCAGAGAACTTGTGGCTAA+AGG | 0.473103 | 8_1:+88012123 | Msa1223500:CDS |
| AAAGATGGTGGTAGTGAAAG+TGG | 0.479068 | 8_1:+88014045 | Msa1223500:CDS |
| GGCTGCCCGTGCTTTAATGC+AGG | 0.480714 | 8_1:+88010883 | Msa1223500:CDS |
| CTTCCTATATAATGCAAGGC+CGG | 0.481302 | 8_1:-88014268 | None:intergenic |
| GAAGGCCAGGAAGGTTGCCT+TGG | 0.484452 | 8_1:+88010985 | Msa1223500:CDS |
| CACATACATTAACAAGTTGA+AGG | 0.486769 | 8_1:+88010967 | Msa1223500:CDS |
| ACTATGTCAGCCATGGTTCA+CGG | 0.492887 | 8_1:-88009547 | None:intergenic |
| CCAGTCCCAGAATTCTGGTT+CGG | 0.497439 | 8_1:-88011338 | None:intergenic |
| ATCTCCTGTCAATATATGAA+AGG | 0.498463 | 8_1:+88011837 | Msa1223500:CDS |
| ATAAGGGTGATATTCAACTT+TGG | 0.498858 | 8_1:+88009887 | Msa1223500:CDS |
| TTGTCTAAGGAGTTCGAAAA+GGG | 0.499749 | 8_1:-88012074 | None:intergenic |
| AAGGCCAGGAAGGTTGCCTT+GGG | 0.501875 | 8_1:+88010986 | Msa1223500:CDS |
| TAGACGATACTTTGATAAGC+TGG | 0.506350 | 8_1:+88013996 | Msa1223500:CDS |
| GCAGCATAAATCCAAACTCC+TGG | 0.515535 | 8_1:-88010827 | None:intergenic |
| CCGCTGTCTATTGGCGTGCT+AGG | 0.515561 | 8_1:+88014574 | Msa1223500:CDS |
| TTTCAAAATCAGAGAACTTG+TGG | 0.516848 | 8_1:+88012116 | Msa1223500:CDS |
| TGAGACAATTGGATGAGGCC+AGG | 0.517854 | 8_1:+88011924 | Msa1223500:CDS |
| TTCCTATATAATGCAAGGCC+GGG | 0.518118 | 8_1:-88014267 | None:intergenic |
| GACAGGAGATGTGGTATGTA+TGG | 0.519034 | 8_1:-88011824 | None:intergenic |
| AAAATAGTCTCGCAAATGCC+AGG | 0.523648 | 8_1:+88014331 | Msa1223500:CDS |
| AAAGAATTATTTGCTGAGCA+TGG | 0.524154 | 8_1:+88011154 | Msa1223500:CDS |
| ATCCCGGCCTTGCATTATAT+AGG | 0.525127 | 8_1:+88014265 | Msa1223500:CDS |
| TCTCCTGTCAATATATGAAA+GGG | 0.526427 | 8_1:+88011838 | Msa1223500:CDS |
| ATATGAAAGGGCTGAAAGCA+TGG | 0.527334 | 8_1:+88011850 | Msa1223500:CDS |
| GAAATCTGATTTCGCTGGGT+TGG | 0.530619 | 8_1:+88009825 | Msa1223500:CDS |
| TGGGGAAGCAATAAATTCAC+TGG | 0.533228 | 8_1:-88014613 | None:intergenic |
| CTTTCTTTGGCTAAAGATGG+TGG | 0.535513 | 8_1:+88014033 | Msa1223500:CDS |
| ATTGGGTTCTTCATCTTTAG+GGG | 0.537286 | 8_1:-88011792 | None:intergenic |
| TTCTAAGATTGAGACTTGAA+GGG | 0.538562 | 8_1:-88011222 | None:intergenic |
| AGTGAATCGTTTAATACGAA+AGG | 0.542260 | 8_1:+88014926 | Msa1223500:three_prime_UTR |
| CAGGAAGGTTGCCTTGGGTG+AGG | 0.542496 | 8_1:+88010991 | Msa1223500:CDS |
| GTATTGCACTATGTCAGCCA+TGG | 0.543507 | 8_1:-88009554 | None:intergenic |
| CTACTATCGCATGGAGGTCA+AGG | 0.543652 | 8_1:+88014410 | Msa1223500:CDS |
| ACCTCCCTGCATTAAAGCAC+GGG | 0.548301 | 8_1:-88010888 | None:intergenic |
| AATCGAAATCTGATTTCGCT+GGG | 0.548958 | 8_1:+88009821 | Msa1223500:CDS |
| TCGATGCACTACGTAGGTTA+CGG | 0.551001 | 8_1:+88009746 | Msa1223500:CDS |
| GCAGTTGAGACAATTGGATG+AGG | 0.554938 | 8_1:+88011919 | Msa1223500:CDS |
| AGAGGCGGAAATTCGAGTAC+AGG | 0.557613 | 8_1:+88009662 | Msa1223500:CDS |
| GACCTCCCTGCATTAAAGCA+CGG | 0.559052 | 8_1:-88010889 | None:intergenic |
| ATATAGGAAGTGCATTGAGC+TGG | 0.561780 | 8_1:+88014281 | Msa1223500:CDS |
| TATCTAGCTTTACCGCATCC+CGG | 0.562125 | 8_1:+88014249 | Msa1223500:CDS |
| ACATTAACAAGTTGAAGGCC+AGG | 0.564813 | 8_1:+88010972 | Msa1223500:CDS |
| ATGAAGAACCCAATATAGAT+GGG | 0.565040 | 8_1:+88011801 | Msa1223500:CDS |
| AGATACTGAATGACATGAAG+AGG | 0.567446 | 8_1:+88011305 | Msa1223500:CDS |
| TATGAAAGGGCTGAAAGCAT+GGG | 0.567635 | 8_1:+88011851 | Msa1223500:CDS |
| AAGATTGAGACTTGAAGGGA+TGG | 0.570301 | 8_1:-88011218 | None:intergenic |
| TCTTGTTAGGTTGCACCCAA+AGG | 0.570444 | 8_1:+88010802 | Msa1223500:CDS |
| TGATCGTAACTTGAATGTTG+TGG | 0.571370 | 8_1:+88010862 | Msa1223500:CDS |
| TTCAGCGCAGCCTCTGTCGA+CGG | 0.571483 | 8_1:+88009508 | Msa1223500:five_prime_UTR |
| TTGAAGTATAAAACTAACAA+TGG | 0.574024 | 8_1:-88014085 | None:intergenic |
| TCATATATTGACAGGAGATG+TGG | 0.577193 | 8_1:-88011833 | None:intergenic |
| AAATCCTCCTTCAACGGACA+CGG | 0.582690 | 8_1:-88009694 | None:intergenic |
| GACTCGTGATCCTAGAACGG+TGG | 0.583414 | 8_1:+88011027 | Msa1223500:CDS |
| CCGAACCAGAATTCTGGGAC+TGG | 0.583962 | 8_1:+88011338 | Msa1223500:CDS |
| TCTGTTGCAGGTTTATGAAG+AGG | 0.585714 | 8_1:+88011703 | Msa1223500:intron |
| TATAATGCAAGGCCGGGATG+CGG | 0.586266 | 8_1:-88014261 | None:intergenic |
| TTTGTGGTCAAAATTGAACT+CGG | 0.586361 | 8_1:-88014666 | None:intergenic |
| TGCACTTCCTATATAATGCA+AGG | 0.587184 | 8_1:-88014272 | None:intergenic |
| TAACAAGTTGAAGGCCAGGA+AGG | 0.590491 | 8_1:+88010976 | Msa1223500:CDS |
| GCGCGTGAGTTGAAGAAACA+AGG | 0.594343 | 8_1:+88009781 | Msa1223500:CDS |
| TTGGGTGGAGTATCTTCGGA+TGG | 0.594540 | 8_1:+88010940 | Msa1223500:CDS |
| AGTTCCATCCTCACTCGAGT+AGG | 0.599751 | 8_1:-88014746 | None:intergenic |
| AATTCGAGTACAGGCTGATG+AGG | 0.600197 | 8_1:+88009671 | Msa1223500:CDS |
| GCTACAAAATCCTCCTTCAA+CGG | 0.606386 | 8_1:-88009700 | None:intergenic |
| TTGGCAAGACTACTATCGCA+TGG | 0.606759 | 8_1:+88014401 | Msa1223500:CDS |
| AAACTAAACATAGTTCCTGA+AGG | 0.616969 | 8_1:-88011740 | None:intergenic |
| GTTGCCTTGGGTGAGGATGA+GGG | 0.618019 | 8_1:+88010998 | Msa1223500:CDS |
| GATACTGAATGACATGAAGA+GGG | 0.621428 | 8_1:+88011306 | Msa1223500:CDS |
| AGCGCAGCCTCTGTCGACGG+TGG | 0.624496 | 8_1:+88009511 | Msa1223500:five_prime_UTR |
| GCTGCCCGTGCTTTAATGCA+GGG | 0.630198 | 8_1:+88010884 | Msa1223500:CDS |
| ACGATACTTTGATAAGCTGG+TGG | 0.633401 | 8_1:+88013999 | Msa1223500:CDS |
| ATACCTTAAGTAAACATACA+GGG | 0.635632 | 8_1:-88014771 | None:intergenic |
| AGTTCCCTCATCCTCACCCA+AGG | 0.637079 | 8_1:-88011002 | None:intergenic |
| TGACATAGTGCAATACAAGC+TGG | 0.643441 | 8_1:+88009561 | Msa1223500:CDS |
| GTTACGGCCACCGTCGACAG+AGG | 0.644726 | 8_1:-88009518 | None:intergenic |
| TAACCCTAAACCGTGAACCA+TGG | 0.645202 | 8_1:+88009537 | Msa1223500:exon |
| CTGGTAGCAAAGCTTTGCAG+CGG | 0.649670 | 8_1:+88011950 | Msa1223500:CDS |
| CGCGTGAGTTGAAGAAACAA+GGG | 0.652834 | 8_1:+88009782 | Msa1223500:CDS |
| TCCGAAGATACTCCACCCAA+AGG | 0.653095 | 8_1:-88010937 | None:intergenic |
| TCTGACTCGTGATCCTAGAA+CGG | 0.653631 | 8_1:+88011024 | Msa1223500:CDS |
| GATAACAAATCAGTATCACT+GGG | 0.657544 | 8_1:-88012052 | None:intergenic |
| AACATCAGAAGACCTTTGGG+TGG | 0.663723 | 8_1:+88010925 | Msa1223500:CDS |
| GCCCGTGCTTTAATGCAGGG+AGG | 0.670197 | 8_1:+88010887 | Msa1223500:CDS |
| TACCTTAAGTAAACATACAG+GGG | 0.670796 | 8_1:-88014770 | None:intergenic |
| ACGAGATTGTTAAACAGAGG+CGG | 0.673954 | 8_1:+88009647 | Msa1223500:CDS |
| GAGGCCGTGTCCGTTGAAGG+AGG | 0.675188 | 8_1:+88009690 | Msa1223500:CDS |
| TTCGAAGATCTCGAGCAACG+TGG | 0.678884 | 8_1:+88009601 | Msa1223500:CDS |
| TCAAAAGGATGGAATTCACA+AGG | 0.680373 | 8_1:+88014104 | Msa1223500:CDS |
| TCGACGAGATTGTTAAACAG+AGG | 0.689269 | 8_1:+88009644 | Msa1223500:CDS |
| ACGTAGGTTACGGAAGAAGT+CGG | 0.692227 | 8_1:+88009756 | Msa1223500:CDS |
| CCTAGCACGCCAATAGACAG+CGG | 0.706749 | 8_1:-88014574 | None:intergenic |
| ACATTACGAAGATATGTGCG+AGG | 0.714205 | 8_1:+88011282 | Msa1223500:CDS |
| GGAATCATCAGAGTTGCAGG+AGG | 0.715136 | 8_1:+88014891 | Msa1223500:three_prime_UTR |
| CGCAGCTCGATGCACTACGT+AGG | 0.747048 | 8_1:+88009740 | Msa1223500:CDS |
| TAGGTTACGGAAGAAGTCGG+TGG | 0.753853 | 8_1:+88009759 | Msa1223500:CDS |
| GCAAGACTACTATCGCATGG+AGG | 0.758958 | 8_1:+88014404 | Msa1223500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGTTTTTAAATTTTTAC+AGG | + | chr8_1:88010769-88010788 | Msa1223500:intron | 10.0% |
| !!! | ATAATTAATAACAGAATTTT+GGG | - | chr8_1:88013828-88013847 | None:intergenic | 10.0% |
| !! | TACATATTAGAAATTAAACT+TGG | - | chr8_1:88010684-88010703 | None:intergenic | 15.0% |
| !!! | AAAGAGATTTTTTGAAATAT+TGG | + | chr8_1:88011243-88011262 | Msa1223500:CDS | 15.0% |
| !!! | TAATTAATAACAGAATTTTG+GGG | - | chr8_1:88013827-88013846 | None:intergenic | 15.0% |
| !!! | CATAATTAATAACAGAATTT+TGG | - | chr8_1:88013829-88013848 | None:intergenic | 15.0% |
| !! | TGAAAAATTATCATAAATCT+GGG | - | chr8_1:88014635-88014654 | None:intergenic | 15.0% |
| !! | TTGAAAAATTATCATAAATC+TGG | - | chr8_1:88014636-88014655 | None:intergenic | 15.0% |
| !!! | TTTTGTAGGGTTAAAAAAAA+TGG | + | chr8_1:88009925-88009944 | Msa1223500:CDS | 20.0% |
| !!! | ATTTGCTATAAAAATTGCTT+AGG | - | chr8_1:88010091-88010110 | None:intergenic | 20.0% |
| !!! | TAAGCAATTTTTATAGCAAA+TGG | + | chr8_1:88010090-88010109 | Msa1223500:intron | 20.0% |
| !!! | ATAATAAGTTGAAAACAACT+TGG | + | chr8_1:88010396-88010415 | Msa1223500:intron | 20.0% |
| !! | TTTAAATTGTCAACACTATA+GGG | - | chr8_1:88010475-88010494 | None:intergenic | 20.0% |
| !! | ATTTAAATTGTCAACACTAT+AGG | - | chr8_1:88010476-88010495 | None:intergenic | 20.0% |
| !!! | GTTGACAATTTAAATTGTTT+TGG | + | chr8_1:88010481-88010500 | Msa1223500:intron | 20.0% |
| !! | AATCAATAGATTTAAACTTG+AGG | + | chr8_1:88010587-88010606 | Msa1223500:intron | 20.0% |
| !!! | AGATTTTTTGAAATATTGGA+GGG | + | chr8_1:88011247-88011266 | Msa1223500:CDS | 20.0% |
| !! | TAGGAAAATTCATCATATTA+TGG | + | chr8_1:88011543-88011562 | Msa1223500:intron | 20.0% |
| !!! | TATGGTTTTGTAATTTACTA+TGG | + | chr8_1:88011561-88011580 | Msa1223500:intron | 20.0% |
| !!! | TTTGTATGCAAATTTTCTAA+TGG | + | chr8_1:88011760-88011779 | Msa1223500:CDS | 20.0% |
| !!! | TTGTATGCAAATTTTCTAAT+GGG | + | chr8_1:88011761-88011780 | Msa1223500:CDS | 20.0% |
| !!! | TGATTTTGAAACATGAAATT+TGG | - | chr8_1:88012107-88012126 | None:intergenic | 20.0% |
| !!! | ATTTGTTTATTCCTTTTGAT+TGG | - | chr8_1:88012205-88012224 | None:intergenic | 20.0% |
| !!! | GTTGAAAATGTTTCATTTTT+TGG | - | chr8_1:88012668-88012687 | None:intergenic | 20.0% |
| !!! | AAATGAAACATTTTCAACAT+TGG | + | chr8_1:88012670-88012689 | Msa1223500:intron | 20.0% |
| !! | AACAAAAAAATGTTCAACAA+TGG | - | chr8_1:88013364-88013383 | None:intergenic | 20.0% |
| !!! | TTTTTTTTAAATAACCACTC+TGG | + | chr8_1:88013454-88013473 | Msa1223500:intron | 20.0% |
| !!! | AACTAAACCTTTTTTTAAGT+TGG | + | chr8_1:88013632-88013651 | Msa1223500:intron | 20.0% |
| !! | TCAAAATCCAACTTAAAAAA+AGG | - | chr8_1:88013642-88013661 | None:intergenic | 20.0% |
| !! | CTTTAAATACATACAATTCA+AGG | - | chr8_1:88013765-88013784 | None:intergenic | 20.0% |
| !!! | AATTAATAACAGAATTTTGG+GGG | - | chr8_1:88013826-88013845 | None:intergenic | 20.0% |
| !! | AACACTATACAAAATAATTC+AGG | - | chr8_1:88013900-88013919 | None:intergenic | 20.0% |
| !!! | ATGACTTGCATAAAATTTAA+GGG | - | chr8_1:88013977-88013996 | None:intergenic | 20.0% |
| !!! | TATGACTTGCATAAAATTTA+AGG | - | chr8_1:88013978-88013997 | None:intergenic | 20.0% |
| !! | TTGAAGTATAAAACTAACAA+TGG | - | chr8_1:88014088-88014107 | None:intergenic | 20.0% |
| !!! | TGTTAGTTTTATACTTCAAA+AGG | + | chr8_1:88014089-88014108 | Msa1223500:CDS | 20.0% |
| !!! | ATGCATATATACCTTTTTTT+TGG | + | chr8_1:88014514-88014533 | Msa1223500:intron | 20.0% |
| !!! | TGCATATATACCTTTTTTTT+GGG | + | chr8_1:88014515-88014534 | Msa1223500:intron | 20.0% |
| !! | GAAAAATTATCATAAATCTG+GGG | - | chr8_1:88014634-88014653 | None:intergenic | 20.0% |
| !!! | TAATACGAAAGGAAAATTTT+AGG | + | chr8_1:88014937-88014956 | Msa1223500:three_prime_UTR | 20.0% |
| !!! | AATACGAAAGGAAAATTTTA+GGG | + | chr8_1:88014938-88014957 | Msa1223500:three_prime_UTR | 20.0% |
| ! | ATGATAAGTGTTTATGCTAT+AGG | - | chr8_1:88010303-88010322 | None:intergenic | 25.0% |
| ! | CTTATTATTATAAGCTCTCT+AGG | - | chr8_1:88010384-88010403 | None:intergenic | 25.0% |
| !!! | GACAATTTAAATTGTTTTGG+TGG | + | chr8_1:88010484-88010503 | Msa1223500:intron | 25.0% |
| ! | ATATGTAGAGCAAATAATTC+AGG | + | chr8_1:88010697-88010716 | Msa1223500:intron | 25.0% |
| ! | AATTCAGGCACTAAAATATT+TGG | + | chr8_1:88010712-88010731 | Msa1223500:intron | 25.0% |
| ! | ATTCAGGCACTAAAATATTT+GGG | + | chr8_1:88010713-88010732 | Msa1223500:intron | 25.0% |
| !!! | GAGATTTTTTGAAATATTGG+AGG | + | chr8_1:88011246-88011265 | Msa1223500:CDS | 25.0% |
| !! | CTTTTCCTTTATGTGTTTTA+TGG | + | chr8_1:88011487-88011506 | Msa1223500:intron | 25.0% |
| !!! | ATGATTTGTTGGATCAATAT+AGG | - | chr8_1:88011667-88011686 | None:intergenic | 25.0% |
| ! | ATATTGATCCAACAAATCAT+TGG | + | chr8_1:88011667-88011686 | Msa1223500:intron | 25.0% |
| ! | TATTGATCCAACAAATCATT+GGG | + | chr8_1:88011668-88011687 | Msa1223500:intron | 25.0% |
| ! | ATTTGGTCAAAATTTGTCTA+AGG | - | chr8_1:88012090-88012109 | None:intergenic | 25.0% |
| ! | CAACAAAAATAAGAGATAAG+TGG | - | chr8_1:88012159-88012178 | None:intergenic | 25.0% |
| ! | ACTAATAATAGATCTGTGAT+GGG | + | chr8_1:88012278-88012297 | Msa1223500:intron | 25.0% |
| !! | AATACATTTAGTCTTCAACT+GGG | - | chr8_1:88012409-88012428 | None:intergenic | 25.0% |
| ! | AAATCACAATTGAGAAACTA+GGG | - | chr8_1:88012468-88012487 | None:intergenic | 25.0% |
| ! | AAAATCACAATTGAGAAACT+AGG | - | chr8_1:88012469-88012488 | None:intergenic | 25.0% |
| !! | TAGTTTCTCAATTGTGATTT+TGG | + | chr8_1:88012468-88012487 | Msa1223500:intron | 25.0% |
| ! | ATAAGTTAAAATCTGAGTGA+TGG | - | chr8_1:88012507-88012526 | None:intergenic | 25.0% |
| ! | CTGAAATATATCTATCAATG+AGG | + | chr8_1:88012827-88012846 | Msa1223500:intron | 25.0% |
| ! | TAGTGGTAAATATTAACTTC+AGG | + | chr8_1:88013142-88013161 | Msa1223500:intron | 25.0% |
| ! | AATCAAAAAGAGATCAAATG+TGG | + | chr8_1:88013553-88013572 | Msa1223500:intron | 25.0% |
| ! | ATCAAAAAGAGATCAAATGT+GGG | + | chr8_1:88013554-88013573 | Msa1223500:intron | 25.0% |
| ! | ATACAAAATAATTCAGGTGA+AGG | - | chr8_1:88013894-88013913 | None:intergenic | 25.0% |
| ! | TTAGAGAGATGAACAAATTT+AGG | - | chr8_1:88013937-88013956 | None:intergenic | 25.0% |
| !!! | AGTTTTATACTTCAAAAGGA+TGG | + | chr8_1:88014093-88014112 | Msa1223500:CDS | 25.0% |
| !! | ATACCTTTTATAGATATCTC+TGG | - | chr8_1:88014130-88014149 | None:intergenic | 25.0% |
| ! | ATTTGATCGATAAATTATCC+AGG | - | chr8_1:88014488-88014507 | None:intergenic | 25.0% |
| ! | AAGATCAAAACCCAAAAAAA+AGG | - | chr8_1:88014528-88014547 | None:intergenic | 25.0% |
| !! | AGCAAATTGAACTTAATTTG+TGG | - | chr8_1:88014685-88014704 | None:intergenic | 25.0% |
| ! | ATACCTTAAGTAAACATACA+GGG | - | chr8_1:88014774-88014793 | None:intergenic | 25.0% |
| ! | AATACCTTAAGTAAACATAC+AGG | - | chr8_1:88014775-88014794 | None:intergenic | 25.0% |
| ! | TGTATGTTTACTTAAGGTAT+TGG | + | chr8_1:88014774-88014793 | Msa1223500:three_prime_UTR | 25.0% |
| !!! | AAAGGAAAATTTTAGGGTAA+TGG | + | chr8_1:88014944-88014963 | Msa1223500:three_prime_UTR | 25.0% |
| TTCTAACTGTTATGTGTTTG+AGG | - | chr8_1:88009463-88009482 | None:intergenic | 30.0% | |
| ATAAGGGTGATATTCAACTT+TGG | + | chr8_1:88009887-88009906 | Msa1223500:CDS | 30.0% | |
| !! | TTCGTTATCTTGAGTTTTGT+AGG | + | chr8_1:88009911-88009930 | Msa1223500:CDS | 30.0% |
| !! | TCGTTATCTTGAGTTTTGTA+GGG | + | chr8_1:88009912-88009931 | Msa1223500:CDS | 30.0% |
| AAAAAATGGCAGAATGAAGA+AGG | + | chr8_1:88009939-88009958 | Msa1223500:CDS | 30.0% | |
| TCAAATAAGCAAATCCAAAC+AGG | + | chr8_1:88010277-88010296 | Msa1223500:intron | 30.0% | |
| !!! | AAATTGTTTTGGTGGTACTA+AGG | + | chr8_1:88010492-88010511 | Msa1223500:intron | 30.0% |
| CTAAGGTAGAATATGATTGT+AGG | + | chr8_1:88010509-88010528 | Msa1223500:intron | 30.0% | |
| TTCAATAATCTATAACCTGC+TGG | - | chr8_1:88010655-88010674 | None:intergenic | 30.0% | |
| GCAGGTTATAGATTATTGAA+AGG | + | chr8_1:88010655-88010674 | Msa1223500:intron | 30.0% | |
| GGTTATAGATTATTGAAAGG+TGG | + | chr8_1:88010658-88010677 | Msa1223500:intron | 30.0% | |
| ! | CACATACATTAACAAGTTGA+AGG | + | chr8_1:88010967-88010986 | Msa1223500:CDS | 30.0% |
| !! | GTTTTCCTCTTTTTCATCAA+GGG | - | chr8_1:88011095-88011114 | None:intergenic | 30.0% |
| TTGTTCTTCTTTGATTCATC+TGG | - | chr8_1:88011136-88011155 | None:intergenic | 30.0% | |
| ! | AAAGAATTATTTGCTGAGCA+TGG | + | chr8_1:88011154-88011173 | Msa1223500:CDS | 30.0% |
| !! | TTCTAAGATTGAGACTTGAA+GGG | - | chr8_1:88011225-88011244 | None:intergenic | 30.0% |
| !! | TTTCTAAGATTGAGACTTGA+AGG | - | chr8_1:88011226-88011245 | None:intergenic | 30.0% |
| CCTGAGGAATTAAAATTTCT+TGG | - | chr8_1:88011408-88011427 | None:intergenic | 30.0% | |
| !!! | CCAAGAAATTTTAATTCCTC+AGG | + | chr8_1:88011405-88011424 | Msa1223500:CDS | 30.0% |
| ! | TTCCTTTATGTGTTTTATGG+TGG | + | chr8_1:88011490-88011509 | Msa1223500:intron | 30.0% |
| GAATGCTTTAACATGAAACT+AGG | + | chr8_1:88011524-88011543 | Msa1223500:intron | 30.0% | |
| TACTTAAACACGGGAAAAAT+GGG | - | chr8_1:88011590-88011609 | None:intergenic | 30.0% | |
| ATACTTAAACACGGGAAAAA+TGG | - | chr8_1:88011591-88011610 | None:intergenic | 30.0% | |
| ! | TTTTCCCGTGTTTAAGTATT+AGG | + | chr8_1:88011592-88011611 | Msa1223500:intron | 30.0% |
| ACCATCCTAATACTTAAACA+CGG | - | chr8_1:88011600-88011619 | None:intergenic | 30.0% | |
| TATTAGGATGGTTAGATAGA+GGG | + | chr8_1:88011608-88011627 | Msa1223500:intron | 30.0% | |
| CAATATAGGCACAAGAAAAA+AGG | - | chr8_1:88011653-88011672 | None:intergenic | 30.0% | |
| AAACTAAACATAGTTCCTGA+AGG | - | chr8_1:88011743-88011762 | None:intergenic | 30.0% | |
| TATTGGGTTCTTCATCTTTA+GGG | - | chr8_1:88011796-88011815 | None:intergenic | 30.0% | |
| ATATTGGGTTCTTCATCTTT+AGG | - | chr8_1:88011797-88011816 | None:intergenic | 30.0% | |
| ATGAAGAACCCAATATAGAT+GGG | + | chr8_1:88011801-88011820 | Msa1223500:CDS | 30.0% | |
| ATCTCCTGTCAATATATGAA+AGG | + | chr8_1:88011837-88011856 | Msa1223500:CDS | 30.0% | |
| TCTCCTGTCAATATATGAAA+GGG | + | chr8_1:88011838-88011857 | Msa1223500:CDS | 30.0% | |
| GATAACAAATCAGTATCACT+GGG | - | chr8_1:88012055-88012074 | None:intergenic | 30.0% | |
| TTTCAAAATCAGAGAACTTG+TGG | + | chr8_1:88012116-88012135 | Msa1223500:CDS | 30.0% | |
| ! | AGCACATTTTATACAAGACA+TGG | - | chr8_1:88012182-88012201 | None:intergenic | 30.0% |
| TAAAATGTGCTCCAATCAAA+AGG | + | chr8_1:88012191-88012210 | Msa1223500:intron | 30.0% | |
| GACTAATAATAGATCTGTGA+TGG | + | chr8_1:88012277-88012296 | Msa1223500:intron | 30.0% | |
| CTCAAAAATCCAATGATCAA+GGG | - | chr8_1:88012328-88012347 | None:intergenic | 30.0% | |
| TAAGTCAGGTAATTCTATAC+AGG | - | chr8_1:88012357-88012376 | None:intergenic | 30.0% | |
| CATACGTAAAAAAGTAAGTC+AGG | - | chr8_1:88012371-88012390 | None:intergenic | 30.0% | |
| !!! | CTGACTTACTTTTTTACGTA+TGG | + | chr8_1:88012369-88012388 | Msa1223500:intron | 30.0% |
| ! | CAATACATTTAGTCTTCAAC+TGG | - | chr8_1:88012410-88012429 | None:intergenic | 30.0% |
| AATCACAATTGAGAAACTAG+GGG | - | chr8_1:88012467-88012486 | None:intergenic | 30.0% | |
| !!! | TTTTTTAAAATGCCCACTCT+GGG | - | chr8_1:88012574-88012593 | None:intergenic | 30.0% |
| !!! | ATTTTTTAAAATGCCCACTC+TGG | - | chr8_1:88012575-88012594 | None:intergenic | 30.0% |
| TCCAGAGAAATATATAGATG+AGG | + | chr8_1:88012861-88012880 | Msa1223500:intron | 30.0% | |
| CCAGAGAAATATATAGATGA+GGG | + | chr8_1:88012862-88012881 | Msa1223500:intron | 30.0% | |
| CAGAGAAATATATAGATGAG+GGG | + | chr8_1:88012863-88012882 | Msa1223500:intron | 30.0% | |
| TGGTAAATATTAACTTCAGG+AGG | - | chr8_1:88013145-88013164 | None:intergenic | 30.0% | |
| GAGTGGTAAATATTAACTTC+AGG | - | chr8_1:88012901-88012920 | None:intergenic | 30.0% | |
| TGGTAAATATTAACTTCAGG+AGG | + | chr8_1:88013145-88013164 | Msa1223500:intron | 30.0% | |
| CCAGAGAAATATATAGATGA+GGG | - | chr8_1:88012862-88012881 | None:intergenic | 30.0% | |
| TCCAGAGAAATATATAGATG+AGG | - | chr8_1:88012861-88012880 | None:intergenic | 30.0% | |
| TCAAAAAGAGATCAAATGTG+GGG | + | chr8_1:88013555-88013574 | Msa1223500:intron | 30.0% | |
| ! | ATTTTCCATAGTATGCTGTA+TGG | + | chr8_1:88014176-88014195 | Msa1223500:intron | 30.0% |
| ! | TTTTCCATAGTATGCTGTAT+GGG | + | chr8_1:88014177-88014196 | Msa1223500:intron | 30.0% |
| TCTGCAATGTAAAATAGTTG+AGG | - | chr8_1:88014229-88014248 | None:intergenic | 30.0% | |
| ! | TTTTATCTCCTATTGATGCA+AGG | - | chr8_1:88014314-88014333 | None:intergenic | 30.0% |
| TGCAGATTCATATAATTTCC+TGG | - | chr8_1:88014352-88014371 | None:intergenic | 30.0% | |
| !!! | ATGACCAAAATGTTGACTTT+TGG | + | chr8_1:88014382-88014401 | Msa1223500:CDS | 30.0% |
| TTTGTGGTCAAAATTGAACT+CGG | - | chr8_1:88014669-88014688 | None:intergenic | 30.0% | |
| TACCTTAAGTAAACATACAG+GGG | - | chr8_1:88014773-88014792 | None:intergenic | 30.0% | |
| TCATGTGTATTCTTATACAC+TGG | + | chr8_1:88014819-88014838 | Msa1223500:three_prime_UTR | 30.0% | |
| CATTCAAAAAACTCAGTATC+TGG | - | chr8_1:88014847-88014866 | None:intergenic | 30.0% | |
| AGTGAATCGTTTAATACGAA+AGG | + | chr8_1:88014926-88014945 | Msa1223500:three_prime_UTR | 30.0% | |
| AAATCGAAATCTGATTTCGC+TGG | + | chr8_1:88009820-88009839 | Msa1223500:CDS | 35.0% | |
| AATCGAAATCTGATTTCGCT+GGG | + | chr8_1:88009821-88009840 | Msa1223500:CDS | 35.0% | |
| !! | ACTTGCTTTGAAGCGTTATA+AGG | + | chr8_1:88009870-88009889 | Msa1223500:CDS | 35.0% |
| !! | CTTGCTTTGAAGCGTTATAA+GGG | + | chr8_1:88009871-88009890 | Msa1223500:CDS | 35.0% |
| GCTGTTATCATAAGCTATCT+TGG | + | chr8_1:88010153-88010172 | Msa1223500:intron | 35.0% | |
| ! | TAAGTCTTGTGAGACTGTTT+GGG | - | chr8_1:88010242-88010261 | None:intergenic | 35.0% |
| ! | ATAAGTCTTGTGAGACTGTT+TGG | - | chr8_1:88010243-88010262 | None:intergenic | 35.0% |
| !!! | AATCTGCAAGCCGTTTTTAT+AGG | + | chr8_1:88010354-88010373 | Msa1223500:intron | 35.0% |
| ! | TCTAGGACAGCCTATAAAAA+CGG | - | chr8_1:88010367-88010386 | None:intergenic | 35.0% |
| ACTATAGGGTCTCTTTGAAT+TGG | - | chr8_1:88010461-88010480 | None:intergenic | 35.0% | |
| TTGTGAAGGCTTAACTATTG+CGG | - | chr8_1:88010624-88010643 | None:intergenic | 35.0% | |
| ! | GGCACTAAAATATTTGGGTT+TGG | + | chr8_1:88010718-88010737 | Msa1223500:intron | 35.0% |
| TGATCGTAACTTGAATGTTG+TGG | + | chr8_1:88010862-88010881 | Msa1223500:CDS | 35.0% | |
| TATGACCCTTGATGAAAAAG+AGG | + | chr8_1:88011087-88011106 | Msa1223500:CDS | 35.0% | |
| !! | CGTTTTCCTCTTTTTCATCA+AGG | - | chr8_1:88011096-88011115 | None:intergenic | 35.0% |
| !!! | AACCTTTTTCGAACTGTCTA+TGG | + | chr8_1:88011181-88011200 | Msa1223500:CDS | 35.0% |
| AGATACTGAATGACATGAAG+AGG | + | chr8_1:88011305-88011324 | Msa1223500:CDS | 35.0% | |
| GATACTGAATGACATGAAGA+GGG | + | chr8_1:88011306-88011325 | Msa1223500:CDS | 35.0% | |
| TTTAATTCCTCAGGTGCAAA+AGG | + | chr8_1:88011414-88011433 | Msa1223500:CDS | 35.0% | |
| CAATTCAGGTACGAATATGT+AGG | + | chr8_1:88011437-88011456 | Msa1223500:intron | 35.0% | |
| TAGGATCTACTGAACTCATT+GGG | + | chr8_1:88011456-88011475 | Msa1223500:intron | 35.0% | |
| AGCCACCATAAAACACATAA+AGG | - | chr8_1:88011495-88011514 | None:intergenic | 35.0% | |
| CCATCCTAATACTTAAACAC+GGG | - | chr8_1:88011599-88011618 | None:intergenic | 35.0% | |
| GTATTAGGATGGTTAGATAG+AGG | + | chr8_1:88011607-88011626 | Msa1223500:intron | 35.0% | |
| ! | AAAAGGAGGTGTAAAATGCT+TGG | - | chr8_1:88011636-88011655 | None:intergenic | 35.0% |
| TATAGGCACAAGAAAAAAGG+AGG | - | chr8_1:88011650-88011669 | None:intergenic | 35.0% | |
| ATTGGGTTCTTCATCTTTAG+GGG | - | chr8_1:88011795-88011814 | None:intergenic | 35.0% | |
| GATGAAGAACCCAATATAGA+TGG | + | chr8_1:88011800-88011819 | Msa1223500:CDS | 35.0% | |
| ATGTATGGCCCATCTATATT+GGG | - | chr8_1:88011812-88011831 | None:intergenic | 35.0% | |
| TATGTATGGCCCATCTATAT+TGG | - | chr8_1:88011813-88011832 | None:intergenic | 35.0% | |
| TCATATATTGACAGGAGATG+TGG | - | chr8_1:88011836-88011855 | None:intergenic | 35.0% | |
| TTGTCTCAACTGCAAATGTA+AGG | - | chr8_1:88011912-88011931 | None:intergenic | 35.0% | |
| ACATTTGCAGTTGAGACAAT+TGG | + | chr8_1:88011913-88011932 | Msa1223500:CDS | 35.0% | |
| AGTGCAGTTATGGGAATTAA+GGG | + | chr8_1:88011988-88012007 | Msa1223500:CDS | 35.0% | |
| GGATAACAAATCAGTATCAC+TGG | - | chr8_1:88012056-88012075 | None:intergenic | 35.0% | |
| TTGTCTAAGGAGTTCGAAAA+GGG | - | chr8_1:88012077-88012096 | None:intergenic | 35.0% | |
| TTTGTCTAAGGAGTTCGAAA+AGG | - | chr8_1:88012078-88012097 | None:intergenic | 35.0% | |
| ! | GTCTTTTATCCCTTGATCAT+TGG | + | chr8_1:88012316-88012335 | Msa1223500:intron | 35.0% |
| GCTCAAAAATCCAATGATCA+AGG | - | chr8_1:88012329-88012348 | None:intergenic | 35.0% | |
| ATCACAATTGAGAAACTAGG+GGG | - | chr8_1:88012466-88012485 | None:intergenic | 35.0% | |
| AGTTAAAATCTGAGTGATGG+TGG | - | chr8_1:88012504-88012523 | None:intergenic | 35.0% | |
| GCAGAAAACAAATCACAAGA+GGG | - | chr8_1:88012630-88012649 | None:intergenic | 35.0% | |
| TGCAGAAAACAAATCACAAG+AGG | - | chr8_1:88012631-88012650 | None:intergenic | 35.0% | |
| AATCTTGAGCTGGTTATCAA+AGG | - | chr8_1:88012704-88012723 | None:intergenic | 35.0% | |
| !! | AAGATTCAAGTTGAAGGATG+TGG | + | chr8_1:88012718-88012737 | Msa1223500:intron | 35.0% |
| TGTGAATGAAAGGTTAACGA+AGG | + | chr8_1:88012741-88012760 | Msa1223500:intron | 35.0% | |
| TTGTCTATCAATGAGGTTGA+TGG | + | chr8_1:88012787-88012806 | Msa1223500:intron | 35.0% | |
| CCCTCATCTATATATTTCTC+TGG | - | chr8_1:88013178-88013197 | None:intergenic | 35.0% | |
| ATATTAACTTCAGGAGGAGT+AGG | - | chr8_1:88013151-88013170 | None:intergenic | 35.0% | |
| ! | TGCATTTGAAGTGGTTAACT+CGG | - | chr8_1:88013070-88013089 | None:intergenic | 35.0% |
| TGTTATAGCTGCATTTGAAG+TGG | - | chr8_1:88013079-88013098 | None:intergenic | 35.0% | |
| TGTTTGAGAACAACACATAG+TGG | + | chr8_1:88013125-88013144 | Msa1223500:intron | 35.0% | |
| ATATTAACTTCAGGAGGAGT+AGG | + | chr8_1:88013151-88013170 | Msa1223500:intron | 35.0% | |
| CCCTCATCTATATATTTCTC+TGG | + | chr8_1:88013178-88013197 | Msa1223500:intron | 35.0% | |
| TGCATTGTCTAATAGAAGAG+CGG | - | chr8_1:88013213-88013232 | None:intergenic | 35.0% | |
| ACAATGCAAGCTCTTTGTAA+TGG | + | chr8_1:88013225-88013244 | Msa1223500:intron | 35.0% | |
| GCTAAAGATTCAGAAGTTGA+AGG | - | chr8_1:88013322-88013341 | None:intergenic | 35.0% | |
| TCAACTTCTGAATCTTTAGC+TGG | + | chr8_1:88013322-88013341 | Msa1223500:intron | 35.0% | |
| TTCAACAATGGAAGAGTCTT+GGG | - | chr8_1:88013352-88013371 | None:intergenic | 35.0% | |
| !! | GCAACGTGTTTTGTTCTTAT+TGG | - | chr8_1:88013480-88013499 | None:intergenic | 35.0% |
| ATCCAAAGTCAAAATCTGAG+TGG | + | chr8_1:88013521-88013540 | Msa1223500:intron | 35.0% | |
| TCCAAAGTCAAAATCTGAGT+GGG | + | chr8_1:88013522-88013541 | Msa1223500:intron | 35.0% | |
| CAAAAAGAGATCAAATGTGG+GGG | + | chr8_1:88013556-88013575 | Msa1223500:intron | 35.0% | |
| AAAAAGAGATCAAATGTGGG+GGG | + | chr8_1:88013557-88013576 | Msa1223500:intron | 35.0% | |
| ! | TAGCTTCAATTGAGCGATTT+TGG | - | chr8_1:88013583-88013602 | None:intergenic | 35.0% |
| ! | TTGCCATTTGAAACCAAAGT+TGG | + | chr8_1:88013689-88013708 | Msa1223500:intron | 35.0% |
| ! | ACACCAACTTTGGTTTCAAA+TGG | - | chr8_1:88013695-88013714 | None:intergenic | 35.0% |
| GGTGAAGGAAAACTAAATTC+AGG | - | chr8_1:88013879-88013898 | None:intergenic | 35.0% | |
| CTCTAACTGTAACTCAATAC+AGG | + | chr8_1:88013951-88013970 | Msa1223500:intron | 35.0% | |
| TAGACGATACTTTGATAAGC+TGG | + | chr8_1:88013996-88014015 | Msa1223500:CDS | 35.0% | |
| GGAGATTTCTGTTCTTTCTT+TGG | + | chr8_1:88014020-88014039 | Msa1223500:CDS | 35.0% | |
| GTTCTTTCTTTGGCTAAAGA+TGG | + | chr8_1:88014030-88014049 | Msa1223500:CDS | 35.0% | |
| TCAAAAGGATGGAATTCACA+AGG | + | chr8_1:88014104-88014123 | Msa1223500:CDS | 35.0% | |
| AGGCCAGAGATATCTATAAA+AGG | + | chr8_1:88014124-88014143 | Msa1223500:CDS | 35.0% | |
| ! | TCTATAAAAGGTATGAGCAG+TGG | + | chr8_1:88014136-88014155 | Msa1223500:intron | 35.0% |
| AAAACCCATACAGCATACTA+TGG | - | chr8_1:88014184-88014203 | None:intergenic | 35.0% | |
| TGCACTTCCTATATAATGCA+AGG | - | chr8_1:88014275-88014294 | None:intergenic | 35.0% | |
| ! | CTTGCCAAAAGTCAACATTT+TGG | - | chr8_1:88014389-88014408 | None:intergenic | 35.0% |
| ! | TGTTGGATTTCTTTTGTACC+TGG | + | chr8_1:88014467-88014486 | Msa1223500:intron | 35.0% |
| TTCCCCTGTATGTTTACTTA+AGG | + | chr8_1:88014768-88014787 | Msa1223500:three_prime_UTR | 35.0% | |
| TGACATAGTGCAATACAAGC+TGG | + | chr8_1:88009561-88009580 | Msa1223500:CDS | 40.0% | |
| TCGACGAGATTGTTAAACAG+AGG | + | chr8_1:88009644-88009663 | Msa1223500:CDS | 40.0% | |
| ACGAGATTGTTAAACAGAGG+CGG | + | chr8_1:88009647-88009666 | Msa1223500:CDS | 40.0% | |
| GCTACAAAATCCTCCTTCAA+CGG | - | chr8_1:88009703-88009722 | None:intergenic | 40.0% | |
| GTTTATGCTATAGGCCTGTT+TGG | - | chr8_1:88010294-88010313 | None:intergenic | 40.0% | |
| !! | TGCTGGAATGAGTTTTGTGA+AGG | - | chr8_1:88010638-88010657 | None:intergenic | 40.0% |
| TTCACAAAACTCATTCCAGC+AGG | + | chr8_1:88010637-88010656 | Msa1223500:intron | 40.0% | |
| AGGCACTTGCAAATCTTGTT+AGG | + | chr8_1:88010789-88010808 | Msa1223500:intron | 40.0% | |
| TTTGGATTTATGCTGCAGCT+TGG | + | chr8_1:88010834-88010853 | Msa1223500:CDS | 40.0% | |
| TTGGATTTATGCTGCAGCTT+GGG | + | chr8_1:88010835-88010854 | Msa1223500:CDS | 40.0% | |
| ! | ACATTAACAAGTTGAAGGCC+AGG | + | chr8_1:88010972-88010991 | Msa1223500:CDS | 40.0% |
| ! | TGTTTTTCTTCCACCGTTCT+AGG | - | chr8_1:88011040-88011059 | None:intergenic | 40.0% |
| GAACGGTGGAAGAAAAACAA+TGG | + | chr8_1:88011041-88011060 | Msa1223500:CDS | 40.0% | |
| CACCATAGACAGTTCGAAAA+AGG | - | chr8_1:88011186-88011205 | None:intergenic | 40.0% | |
| !!! | CTTTTTCGAACTGTCTATGG+TGG | + | chr8_1:88011184-88011203 | Msa1223500:CDS | 40.0% |
| AAGATTGAGACTTGAAGGGA+TGG | - | chr8_1:88011221-88011240 | None:intergenic | 40.0% | |
| ACATTACGAAGATATGTGCG+AGG | + | chr8_1:88011282-88011301 | Msa1223500:CDS | 40.0% | |
| TTTCAACCGAACCAGAATTC+TGG | + | chr8_1:88011332-88011351 | Msa1223500:CDS | 40.0% | |
| TTCAACCGAACCAGAATTCT+GGG | + | chr8_1:88011333-88011352 | Msa1223500:CDS | 40.0% | |
| GTAGGATCTACTGAACTCAT+TGG | + | chr8_1:88011455-88011474 | Msa1223500:intron | 40.0% | |
| CCCGTGTTTAAGTATTAGGA+TGG | + | chr8_1:88011596-88011615 | Msa1223500:intron | 40.0% | |
| TCCAACAAATCATTGGGTTC+TGG | + | chr8_1:88011674-88011693 | Msa1223500:intron | 40.0% | |
| TCTGTTGCAGGTTTATGAAG+AGG | + | chr8_1:88011703-88011722 | Msa1223500:intron | 40.0% | |
| CAGCCCTTTCATATATTGAC+AGG | - | chr8_1:88011844-88011863 | None:intergenic | 40.0% | |
| ATATGAAAGGGCTGAAAGCA+TGG | + | chr8_1:88011850-88011869 | Msa1223500:CDS | 40.0% | |
| ! | TATGAAAGGGCTGAAAGCAT+GGG | + | chr8_1:88011851-88011870 | Msa1223500:CDS | 40.0% |
| TTGCAGAATCAGTGCAGTTA+TGG | + | chr8_1:88011978-88011997 | Msa1223500:CDS | 40.0% | |
| TGCAGAATCAGTGCAGTTAT+GGG | + | chr8_1:88011979-88011998 | Msa1223500:CDS | 40.0% | |
| CAGTGCAGTTATGGGAATTA+AGG | + | chr8_1:88011987-88012006 | Msa1223500:CDS | 40.0% | |
| ATCAGAGAACTTGTGGCTAA+AGG | + | chr8_1:88012123-88012142 | Msa1223500:CDS | 40.0% | |
| TCACATCTTGCATTTGCAAG+AGG | - | chr8_1:88012259-88012278 | None:intergenic | 40.0% | |
| !! | TCTTCAACTGGGAAAGCATT+CGG | - | chr8_1:88012398-88012417 | None:intergenic | 40.0% |
| !! | TAAAATCTGAGTGATGGTGG+TGG | - | chr8_1:88012501-88012520 | None:intergenic | 40.0% |
| CTTCAACTTGAATCTTGAGC+TGG | - | chr8_1:88012714-88012733 | None:intergenic | 40.0% | |
| !! | CAGCTCAAGATTCAAGTTGA+AGG | + | chr8_1:88012712-88012731 | Msa1223500:intron | 40.0% |
| AAGGATGTGGTGTGAATGAA+AGG | + | chr8_1:88012731-88012750 | Msa1223500:intron | 40.0% | |
| CTCTGCATTGTCTATCAATG+AGG | + | chr8_1:88012780-88012799 | Msa1223500:intron | 40.0% | |
| TTGTCTGAGAAAACACAGAG+TGG | - | chr8_1:88012918-88012937 | None:intergenic | 40.0% | |
| ! | TACATGGTTCTACGGTTTCT+TGG | - | chr8_1:88012985-88013004 | None:intergenic | 40.0% |
| !! | CAAGCTCTTTGTAATGGACT+TGG | + | chr8_1:88013231-88013250 | Msa1223500:intron | 40.0% |
| TTAACGAAGGCAAAGAAGCA+GGG | - | chr8_1:88013280-88013299 | None:intergenic | 40.0% | |
| AAGGATGTGATGTGAATGAG+CGG | - | chr8_1:88013303-88013322 | None:intergenic | 40.0% | |
| GTTCAACAATGGAAGAGTCT+TGG | - | chr8_1:88013353-88013372 | None:intergenic | 40.0% | |
| TTTGTTCTTATTGGCCAGAG+TGG | - | chr8_1:88013471-88013490 | None:intergenic | 40.0% | |
| CCAAAGTCAAAATCTGAGTG+GGG | + | chr8_1:88013523-88013542 | Msa1223500:intron | 40.0% | |
| CAAAGTCAAAATCTGAGTGG+GGG | + | chr8_1:88013524-88013543 | Msa1223500:intron | 40.0% | |
| ATCGCTCAATTGAAGCTAGA+AGG | + | chr8_1:88013585-88013604 | Msa1223500:intron | 40.0% | |
| TCGCTCAATTGAAGCTAGAA+GGG | + | chr8_1:88013586-88013605 | Msa1223500:intron | 40.0% | |
| CGAGAAACAAACACCAACTT+TGG | - | chr8_1:88013705-88013724 | None:intergenic | 40.0% | |
| ACGATACTTTGATAAGCTGG+TGG | + | chr8_1:88013999-88014018 | Msa1223500:CDS | 40.0% | |
| CTTTCTTTGGCTAAAGATGG+TGG | + | chr8_1:88014033-88014052 | Msa1223500:CDS | 40.0% | |
| ! | AAAGATGGTGGTAGTGAAAG+TGG | + | chr8_1:88014045-88014064 | Msa1223500:CDS | 40.0% |
| TTCCTATATAATGCAAGGCC+GGG | - | chr8_1:88014270-88014289 | None:intergenic | 40.0% | |
| CTTCCTATATAATGCAAGGC+CGG | - | chr8_1:88014271-88014290 | None:intergenic | 40.0% | |
| ! | ATATAGGAAGTGCATTGAGC+TGG | + | chr8_1:88014281-88014300 | Msa1223500:CDS | 40.0% |
| GAAGCAAACCTTGCATCAAT+AGG | + | chr8_1:88014303-88014322 | Msa1223500:CDS | 40.0% | |
| AAAATAGTCTCGCAAATGCC+AGG | + | chr8_1:88014331-88014350 | Msa1223500:CDS | 40.0% | |
| ! | TGGAGGTCAAGGTATTCAAT+TGG | + | chr8_1:88014421-88014440 | Msa1223500:intron | 40.0% |
| !! | TTGGGTTTTGATCTTGCAGA+TGG | + | chr8_1:88014533-88014552 | Msa1223500:intron | 40.0% |
| !! | TGGGTTTTGATCTTGCAGAT+GGG | + | chr8_1:88014534-88014553 | Msa1223500:intron | 40.0% |
| TGGGGAAGCAATAAATTCAC+TGG | - | chr8_1:88014616-88014635 | None:intergenic | 40.0% | |
| ! | TCGTGTCAAGTTGCATTTGT+AGG | + | chr8_1:88014870-88014889 | Msa1223500:three_prime_UTR | 40.0% |
| ! | TGGTTCACGGTTTAGGGTTA+CGG | - | chr8_1:88009537-88009556 | None:intergenic | 45.0% |
| TAACCCTAAACCGTGAACCA+TGG | + | chr8_1:88009537-88009556 | Msa1223500:exon | 45.0% | |
| ACTATGTCAGCCATGGTTCA+CGG | - | chr8_1:88009550-88009569 | None:intergenic | 45.0% | |
| GTATTGCACTATGTCAGCCA+TGG | - | chr8_1:88009557-88009576 | None:intergenic | 45.0% | |
| AATTCGAGTACAGGCTGATG+AGG | + | chr8_1:88009671-88009690 | Msa1223500:CDS | 45.0% | |
| AAATCCTCCTTCAACGGACA+CGG | - | chr8_1:88009697-88009716 | None:intergenic | 45.0% | |
| TCGATGCACTACGTAGGTTA+CGG | + | chr8_1:88009746-88009765 | Msa1223500:CDS | 45.0% | |
| ACGTAGGTTACGGAAGAAGT+CGG | + | chr8_1:88009756-88009775 | Msa1223500:CDS | 45.0% | |
| ! | CGCGTGAGTTGAAGAAACAA+GGG | + | chr8_1:88009782-88009801 | Msa1223500:CDS | 45.0% |
| GAAATCTGATTTCGCTGGGT+TGG | + | chr8_1:88009825-88009844 | Msa1223500:CDS | 45.0% | |
| ! | TCTTGTTAGGTTGCACCCAA+AGG | + | chr8_1:88010802-88010821 | Msa1223500:CDS | 45.0% |
| TCCAAACTCCTGGAACCTTT+GGG | - | chr8_1:88010820-88010839 | None:intergenic | 45.0% | |
| ATCCAAACTCCTGGAACCTT+TGG | - | chr8_1:88010821-88010840 | None:intergenic | 45.0% | |
| GCAGCATAAATCCAAACTCC+TGG | - | chr8_1:88010830-88010849 | None:intergenic | 45.0% | |
| CCCAAAGGTCTTCTGATGTT+GGG | - | chr8_1:88010925-88010944 | None:intergenic | 45.0% | |
| CCCAACATCAGAAGACCTTT+GGG | + | chr8_1:88010922-88010941 | Msa1223500:CDS | 45.0% | |
| ACCCAAAGGTCTTCTGATGT+TGG | - | chr8_1:88010926-88010945 | None:intergenic | 45.0% | |
| AACATCAGAAGACCTTTGGG+TGG | + | chr8_1:88010925-88010944 | Msa1223500:CDS | 45.0% | |
| ! | ACCTTTGGGTGGAGTATCTT+CGG | + | chr8_1:88010936-88010955 | Msa1223500:CDS | 45.0% |
| ! | TAACAAGTTGAAGGCCAGGA+AGG | + | chr8_1:88010976-88010995 | Msa1223500:CDS | 45.0% |
| ! | TCTGACTCGTGATCCTAGAA+CGG | + | chr8_1:88011024-88011043 | Msa1223500:CDS | 45.0% |
| ! | TGAATTGCCTTTTGCACCTG+AGG | - | chr8_1:88011424-88011443 | None:intergenic | 45.0% |
| TCAGGTGCAAAAGGCAATTC+AGG | + | chr8_1:88011423-88011442 | Msa1223500:CDS | 45.0% | |
| ! | GCCAGAACCCAATGATTTGT+TGG | - | chr8_1:88011678-88011697 | None:intergenic | 45.0% |
| !! | TTCTGGCTTTGATCTGTTGC+AGG | + | chr8_1:88011691-88011710 | Msa1223500:intron | 45.0% |
| !! | GCTTTGAAAAGTGTGCCTTC+AGG | + | chr8_1:88011725-88011744 | Msa1223500:CDS | 45.0% |
| GACAGGAGATGTGGTATGTA+TGG | - | chr8_1:88011827-88011846 | None:intergenic | 45.0% | |
| GCAGTTGAGACAATTGGATG+AGG | + | chr8_1:88011919-88011938 | Msa1223500:CDS | 45.0% | |
| AAGCTTTGCTACCAGTTTCC+TGG | - | chr8_1:88011945-88011964 | None:intergenic | 45.0% | |
| !! | CTGTGATGGGTTTAGAACAC+TGG | + | chr8_1:88012291-88012310 | Msa1223500:intron | 45.0% |
| TTCATTCCTATTGCCCAGAG+TGG | + | chr8_1:88012558-88012577 | Msa1223500:intron | 45.0% | |
| TCATTCCTATTGCCCAGAGT+GGG | + | chr8_1:88012559-88012578 | Msa1223500:intron | 45.0% | |
| GTTAACGAAGGCAAGAAGCA+AGG | + | chr8_1:88012753-88012772 | Msa1223500:intron | 45.0% | |
| ! | TGTTGTTGTTGCGTCTGTTG+TGG | + | chr8_1:88012938-88012957 | Msa1223500:intron | 45.0% |
| ! | GACACACGTACATGGTTCTA+CGG | - | chr8_1:88012993-88013012 | None:intergenic | 45.0% |
| GTAGAACCATGTACGTGTGT+CGG | + | chr8_1:88012992-88013011 | Msa1223500:intron | 45.0% | |
| CAAAGAATGCAAAGGAACCG+TGG | - | chr8_1:88013044-88013063 | None:intergenic | 45.0% | |
| CTCGGCAACAAAGAATGCAA+AGG | - | chr8_1:88013052-88013071 | None:intergenic | 45.0% | |
| GTTAACGAAGGCAAAGAAGC+AGG | - | chr8_1:88013281-88013300 | None:intergenic | 45.0% | |
| TGTGAATGAGCGGTTAACGA+AGG | - | chr8_1:88013293-88013312 | None:intergenic | 45.0% | |
| !!! | CCCCACTCAGATTTTGACTT+TGG | - | chr8_1:88013526-88013545 | None:intergenic | 45.0% |
| CGCTCAATTGAAGCTAGAAG+GGG | + | chr8_1:88013587-88013606 | Msa1223500:intron | 45.0% | |
| GGCCAAAATCGCACAATTGA+GGG | + | chr8_1:88013608-88013627 | Msa1223500:intron | 45.0% | |
| ! | TGCCCTCAATTGTGCGATTT+TGG | - | chr8_1:88013613-88013632 | None:intergenic | 45.0% |
| TATGAGCAGTGGAATCAGTG+CGG | + | chr8_1:88014147-88014166 | Msa1223500:intron | 45.0% | |
| !! | TATCTAGCTTTACCGCATCC+CGG | + | chr8_1:88014249-88014268 | Msa1223500:CDS | 45.0% |
| ATCCCGGCCTTGCATTATAT+AGG | + | chr8_1:88014265-88014284 | Msa1223500:CDS | 45.0% | |
| TTGGCAAGACTACTATCGCA+TGG | + | chr8_1:88014401-88014420 | Msa1223500:CDS | 45.0% | |
| AACAAGCTACCGCTGTCTAT+TGG | + | chr8_1:88014565-88014584 | Msa1223500:CDS | 45.0% | |
| ! | GTGTTTTTCCTACTCGAGTG+AGG | + | chr8_1:88014738-88014757 | Msa1223500:three_prime_UTR | 45.0% |
| ! | TTTTCCTACTCGAGTGAGGA+TGG | + | chr8_1:88014742-88014761 | Msa1223500:three_prime_UTR | 45.0% |
| GTAGGAATCATCAGAGTTGC+AGG | + | chr8_1:88014888-88014907 | Msa1223500:three_prime_UTR | 45.0% | |
| CAGCCATGGTTCACGGTTTA+GGG | - | chr8_1:88009543-88009562 | None:intergenic | 50.0% | |
| TCAGCCATGGTTCACGGTTT+AGG | - | chr8_1:88009544-88009563 | None:intergenic | 50.0% | |
| TTCGAAGATCTCGAGCAACG+TGG | + | chr8_1:88009601-88009620 | Msa1223500:CDS | 50.0% | |
| AGAGGCGGAAATTCGAGTAC+AGG | + | chr8_1:88009662-88009681 | Msa1223500:CDS | 50.0% | |
| TAGGTTACGGAAGAAGTCGG+TGG | + | chr8_1:88009759-88009778 | Msa1223500:CDS | 50.0% | |
| ! | GCGCGTGAGTTGAAGAAACA+AGG | + | chr8_1:88009781-88009800 | Msa1223500:CDS | 50.0% |
| !! | CTGATTTCGCTGGGTTGGTT+AGG | + | chr8_1:88009830-88009849 | Msa1223500:CDS | 50.0% |
| ACCCAAAGGTTCCAGGAGTT+TGG | + | chr8_1:88010816-88010835 | Msa1223500:CDS | 50.0% | |
| ACCTCCCTGCATTAAAGCAC+GGG | - | chr8_1:88010891-88010910 | None:intergenic | 50.0% | |
| GACCTCCCTGCATTAAAGCA+CGG | - | chr8_1:88010892-88010911 | None:intergenic | 50.0% | |
| GCCCAACATCAGAAGACCTT+TGG | + | chr8_1:88010921-88010940 | Msa1223500:CDS | 50.0% | |
| TCCGAAGATACTCCACCCAA+AGG | - | chr8_1:88010940-88010959 | None:intergenic | 50.0% | |
| ! | TTGGGTGGAGTATCTTCGGA+TGG | + | chr8_1:88010940-88010959 | Msa1223500:CDS | 50.0% |
| ! | CCAGTCCCAGAATTCTGGTT+CGG | - | chr8_1:88011341-88011360 | None:intergenic | 50.0% |
| TGAGACAATTGGATGAGGCC+AGG | + | chr8_1:88011924-88011943 | Msa1223500:CDS | 50.0% | |
| ATTGGATGAGGCCAGGAAAC+TGG | + | chr8_1:88011931-88011950 | Msa1223500:CDS | 50.0% | |
| CTGGTAGCAAAGCTTTGCAG+CGG | + | chr8_1:88011950-88011969 | Msa1223500:CDS | 50.0% | |
| !! | AATCTGAGTGATGGTGGTGG+TGG | - | chr8_1:88012498-88012517 | None:intergenic | 50.0% |
| AAATGCCCACTCTGGGCAAT+AGG | - | chr8_1:88012567-88012586 | None:intergenic | 50.0% | |
| TTGTGACCGACACACGTACA+TGG | - | chr8_1:88013001-88013020 | None:intergenic | 50.0% | |
| GGGCCAAAATCGCACAATTG+AGG | + | chr8_1:88013607-88013626 | Msa1223500:intron | 50.0% | |
| ATGAGCAGTGGAATCAGTGC+GGG | + | chr8_1:88014148-88014167 | Msa1223500:intron | 50.0% | |
| TATAATGCAAGGCCGGGATG+CGG | - | chr8_1:88014264-88014283 | None:intergenic | 50.0% | |
| GCAAGACTACTATCGCATGG+AGG | + | chr8_1:88014404-88014423 | Msa1223500:CDS | 50.0% | |
| CTACTATCGCATGGAGGTCA+AGG | + | chr8_1:88014410-88014429 | Msa1223500:CDS | 50.0% | |
| AGTTCCATCCTCACTCGAGT+AGG | - | chr8_1:88014749-88014768 | None:intergenic | 50.0% | |
| GGAATCATCAGAGTTGCAGG+AGG | + | chr8_1:88014891-88014910 | Msa1223500:three_prime_UTR | 50.0% | |
| GGCTGCGCTGAACAATCTCT+TGG | - | chr8_1:88009500-88009519 | None:intergenic | 55.0% | |
| AGGTTGCACCCAAAGGTTCC+AGG | + | chr8_1:88010809-88010828 | Msa1223500:CDS | 55.0% | |
| GCTGCCCGTGCTTTAATGCA+GGG | + | chr8_1:88010884-88010903 | Msa1223500:CDS | 55.0% | |
| AAGGCCAGGAAGGTTGCCTT+GGG | + | chr8_1:88010986-88011005 | Msa1223500:CDS | 55.0% | |
| GTTGCCTTGGGTGAGGATGA+GGG | + | chr8_1:88010998-88011017 | Msa1223500:CDS | 55.0% | |
| AGTTCCCTCATCCTCACCCA+AGG | - | chr8_1:88011005-88011024 | None:intergenic | 55.0% | |
| GACTCGTGATCCTAGAACGG+TGG | + | chr8_1:88011027-88011046 | Msa1223500:CDS | 55.0% | |
| !! | CCGAACCAGAATTCTGGGAC+TGG | + | chr8_1:88011338-88011357 | Msa1223500:CDS | 55.0% |
| GCAAGCCAGTCCCAGAATTC+TGG | - | chr8_1:88011346-88011365 | None:intergenic | 55.0% | |
| !! | TGAGTGATGGTGGTGGTGGA+GGG | - | chr8_1:88012494-88012513 | None:intergenic | 55.0% |
| CACAACATGAAACGCGCGCA+TGG | + | chr8_1:88013016-88013035 | Msa1223500:intron | 55.0% | |
| TGAGCAGTGGAATCAGTGCG+GGG | + | chr8_1:88014149-88014168 | Msa1223500:intron | 55.0% | |
| CCTAGCACGCCAATAGACAG+CGG | - | chr8_1:88014577-88014596 | None:intergenic | 55.0% | |
| TTCAGCGCAGCCTCTGTCGA+CGG | + | chr8_1:88009508-88009527 | Msa1223500:five_prime_UTR | 60.0% | |
| GATGAGGCCGTGTCCGTTGA+AGG | + | chr8_1:88009687-88009706 | Msa1223500:CDS | 60.0% | |
| CGCAGCTCGATGCACTACGT+AGG | + | chr8_1:88009740-88009759 | Msa1223500:CDS | 60.0% | |
| GGCTGCCCGTGCTTTAATGC+AGG | + | chr8_1:88010883-88010902 | Msa1223500:CDS | 60.0% | |
| GCCCGTGCTTTAATGCAGGG+AGG | + | chr8_1:88010887-88010906 | Msa1223500:CDS | 60.0% | |
| GAAGGCCAGGAAGGTTGCCT+TGG | + | chr8_1:88010985-88011004 | Msa1223500:CDS | 60.0% | |
| CTCACCCAAGGCAACCTTCC+TGG | - | chr8_1:88010993-88011012 | None:intergenic | 60.0% | |
| CAGGAAGGTTGCCTTGGGTG+AGG | + | chr8_1:88010991-88011010 | Msa1223500:CDS | 60.0% | |
| GGTTGCCTTGGGTGAGGATG+AGG | + | chr8_1:88010997-88011016 | Msa1223500:CDS | 60.0% | |
| !! | CTGAGTGATGGTGGTGGTGG+AGG | - | chr8_1:88012495-88012514 | None:intergenic | 60.0% |
| GAAACGCGCGCATGGTTCCA+CGG | + | chr8_1:88013024-88013043 | Msa1223500:intron | 60.0% | |
| CCGCTGTCTATTGGCGTGCT+AGG | + | chr8_1:88014574-88014593 | Msa1223500:CDS | 60.0% | |
| GTTACGGCCACCGTCGACAG+AGG | - | chr8_1:88009521-88009540 | None:intergenic | 65.0% | |
| GAGGCCGTGTCCGTTGAAGG+AGG | + | chr8_1:88009690-88009709 | Msa1223500:CDS | 65.0% | |
| AGCGCAGCCTCTGTCGACGG+TGG | + | chr8_1:88009511-88009530 | Msa1223500:five_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 88009457 | 88015006 | 88009457 | ID=Msa1223500;Name=Msa1223500 |
| chr8_1 | mRNA | 88009457 | 88015006 | 88009457 | ID=Msa1223500-mRNA-1;Parent=Msa1223500;Name=Msa1223500-mRNA-1;_AED=0.05;_eAED=0.05;_QI=99|1|1|1|0.8|1|6|362|646 |
| chr8_1 | exon | 88009457 | 88009960 | 88009457 | ID=Msa1223500-mRNA-1:exon:31915;Parent=Msa1223500-mRNA-1 |
| chr8_1 | exon | 88010791 | 88011444 | 88010791 | ID=Msa1223500-mRNA-1:exon:31916;Parent=Msa1223500-mRNA-1 |
| chr8_1 | exon | 88011713 | 88012144 | 88011713 | ID=Msa1223500-mRNA-1:exon:31917;Parent=Msa1223500-mRNA-1 |
| chr8_1 | exon | 88013973 | 88014145 | 88013973 | ID=Msa1223500-mRNA-1:exon:31918;Parent=Msa1223500-mRNA-1 |
| chr8_1 | exon | 88014248 | 88014431 | 88014248 | ID=Msa1223500-mRNA-1:exon:31919;Parent=Msa1223500-mRNA-1 |
| chr8_1 | exon | 88014552 | 88015006 | 88014552 | ID=Msa1223500-mRNA-1:exon:31920;Parent=Msa1223500-mRNA-1 |
| chr8_1 | five_prime_UTR | 88009457 | 88009555 | 88009457 | ID=Msa1223500-mRNA-1:five_prime_utr;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88009556 | 88009960 | 88009556 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88010791 | 88011444 | 88010791 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88011713 | 88012144 | 88011713 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88013973 | 88014145 | 88013973 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88014248 | 88014431 | 88014248 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | CDS | 88014552 | 88014644 | 88014552 | ID=Msa1223500-mRNA-1:cds;Parent=Msa1223500-mRNA-1 |
| chr8_1 | three_prime_UTR | 88014645 | 88015006 | 88014645 | ID=Msa1223500-mRNA-1:three_prime_utr;Parent=Msa1223500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
