Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277260 | sp|Q7TND5|RPF1_MOUSE | 50.154 | 325 | 133 | 5 | 36 | 358 | 52 | 349 | 1.27e-95 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277260 | A0A072TYA8 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032810 | Msa1277260 | 0.822058 | 2.902620e-53 | -8.615850e-47 |
| Msa0044990 | Msa1277260 | 0.831045 | 2.084999e-55 | -8.615850e-47 |
| Msa0067590 | Msa1277260 | -0.827836 | 1.255409e-54 | -8.615850e-47 |
| Msa0091300 | Msa1277260 | -0.817260 | 3.615623e-52 | -8.615850e-47 |
| Msa0114570 | Msa1277260 | 0.823015 | 1.738932e-53 | -8.615850e-47 |
| Msa0115870 | Msa1277260 | 0.842006 | 3.364648e-58 | -8.615850e-47 |
| Msa0610550 | Msa1277260 | 0.805278 | 1.442101e-49 | -8.615850e-47 |
| Msa0617540 | Msa1277260 | 0.811026 | 8.600385e-51 | -8.615850e-47 |
| Msa0626920 | Msa1277260 | 0.802502 | 5.443148e-49 | -8.615850e-47 |
| Msa0628410 | Msa1277260 | 0.807840 | 4.153354e-50 | -8.615850e-47 |
| Msa0651870 | Msa1277260 | 0.800114 | 1.677438e-48 | -8.615850e-47 |
| Msa0664560 | Msa1277260 | 0.837415 | 5.267477e-57 | -8.615850e-47 |
| Msa0698780 | Msa1277260 | 0.814550 | 1.455187e-51 | -8.615850e-47 |
| Msa0712860 | Msa1277260 | 0.832374 | 9.805269e-56 | -8.615850e-47 |
| Msa0741520 | Msa1277260 | 0.805110 | 1.563379e-49 | -8.615850e-47 |
| Msa0776560 | Msa1277260 | 0.803715 | 3.054187e-49 | -8.615850e-47 |
| Msa0796580 | Msa1277260 | -0.811686 | 6.183763e-51 | -8.615850e-47 |
| Msa0800480 | Msa1277260 | 0.824971 | 6.045128e-54 | -8.615850e-47 |
| Msa0841860 | Msa1277260 | 0.828367 | 9.351977e-55 | -8.615850e-47 |
| Msa0120880 | Msa1277260 | 0.835843 | 1.324979e-56 | -8.615850e-47 |
| Msa0140770 | Msa1277260 | -0.835074 | 2.073288e-56 | -8.615850e-47 |
| Msa0156760 | Msa1277260 | 0.801725 | 7.864526e-49 | -8.615850e-47 |
| Msa0172930 | Msa1277260 | 0.843392 | 1.441765e-58 | -8.615850e-47 |
| Msa0186540 | Msa1277260 | 0.813050 | 3.114266e-51 | -8.615850e-47 |
| Msa0206040 | Msa1277260 | -0.801055 | 1.078527e-48 | -8.615850e-47 |
| Msa0218720 | Msa1277260 | 0.824119 | 9.590631e-54 | -8.615850e-47 |
| Msa0229150 | Msa1277260 | 0.809740 | 1.629504e-50 | -8.615850e-47 |
| Msa0230520 | Msa1277260 | 0.824073 | 9.833905e-54 | -8.615850e-47 |
| Msa1235610 | Msa1277260 | 0.850999 | 1.180890e-60 | -8.615850e-47 |
| Msa1277260 | Msa1300620 | 0.827575 | 1.450162e-54 | -8.615850e-47 |
| Msa1277260 | Msa1315890 | 0.960792 | 5.852509e-119 | -8.615850e-47 |
| Msa1277260 | Msa1329730 | 0.865238 | 6.825554e-65 | -8.615850e-47 |
| Msa1277260 | Msa1329750 | 0.878362 | 2.987158e-69 | -8.615850e-47 |
| Msa1277260 | Msa1374830 | 0.812035 | 5.191475e-51 | -8.615850e-47 |
| Msa1277260 | Msa1376660 | 0.831996 | 1.215965e-55 | -8.615850e-47 |
| Msa1277260 | Msa1385720 | 0.842098 | 3.181449e-58 | -8.615850e-47 |
| Msa1277260 | Msa1411970 | 0.817585 | 3.054978e-52 | -8.615850e-47 |
| Msa1277260 | Msa1420430 | 0.842774 | 2.105145e-58 | -8.615850e-47 |
| Msa1277260 | Msa1434090 | 0.831427 | 1.679955e-55 | -8.615850e-47 |
| Msa1277260 | Msa1435390 | 0.823621 | 1.255349e-53 | -8.615850e-47 |
| Msa1277260 | Msa1445370 | 0.843743 | 1.161385e-58 | -8.615850e-47 |
| Msa0377820 | Msa1277260 | 0.821713 | 3.488854e-53 | -8.615850e-47 |
| Msa0385500 | Msa1277260 | 0.815716 | 8.015401e-52 | -8.615850e-47 |
| Msa0426580 | Msa1277260 | 0.817288 | 3.564093e-52 | -8.615850e-47 |
| Msa0437020 | Msa1277260 | 0.841390 | 4.891196e-58 | -8.615850e-47 |
| Msa0462600 | Msa1277260 | 0.813143 | 2.971062e-51 | -8.615850e-47 |
| Msa0472930 | Msa1277260 | 0.824937 | 6.157892e-54 | -8.615850e-47 |
| Msa0479760 | Msa1277260 | -0.839031 | 2.020132e-57 | -8.615850e-47 |
| Msa0992550 | Msa1277260 | 0.805156 | 1.529591e-49 | -8.615850e-47 |
| Msa1004710 | Msa1277260 | 0.815859 | 7.450654e-52 | -8.615850e-47 |
| Msa1021520 | Msa1277260 | 0.840383 | 8.989444e-58 | -8.615850e-47 |
| Msa1039810 | Msa1277260 | 0.812547 | 4.013030e-51 | -8.615850e-47 |
| Msa1085420 | Msa1277260 | 0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa1089220 | Msa1277260 | 0.809110 | 2.224336e-50 | -8.615850e-47 |
| Msa1105510 | Msa1277260 | 0.807729 | 4.384859e-50 | -8.615850e-47 |
| Msa0256140 | Msa1277260 | 0.820109 | 8.158522e-53 | -8.615850e-47 |
| Msa0258390 | Msa1277260 | 0.803493 | 3.395293e-49 | -8.615850e-47 |
| Msa0280370 | Msa1277260 | 0.815832 | 7.552546e-52 | -8.615850e-47 |
| Msa0297610 | Msa1277260 | 0.818736 | 1.677246e-52 | -8.615850e-47 |
| Msa0319640 | Msa1277260 | 0.813576 | 2.386294e-51 | -8.615850e-47 |
| Msa0343500 | Msa1277260 | 0.850510 | 1.620783e-60 | -8.615850e-47 |
| Msa1123770 | Msa1277260 | 0.843638 | 1.238626e-58 | -8.615850e-47 |
| Msa1128280 | Msa1277260 | 0.801697 | 7.966742e-49 | -8.615850e-47 |
| Msa1147650 | Msa1277260 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa1165270 | Msa1277260 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
| Msa1169910 | Msa1277260 | 0.839303 | 1.717329e-57 | -8.615850e-47 |
| Msa1175350 | Msa1277260 | 0.895363 | 1.029062e-75 | -8.615850e-47 |
| Msa1205890 | Msa1277260 | 0.818303 | 2.103333e-52 | -8.615850e-47 |
| Msa1223500 | Msa1277260 | 0.803584 | 3.252010e-49 | -8.615850e-47 |
| Msa0517590 | Msa1277260 | 0.806847 | 6.742082e-50 | -8.615850e-47 |
| Msa0523430 | Msa1277260 | -0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0566940 | Msa1277260 | -0.812105 | 5.010887e-51 | -8.615850e-47 |
| Msa0577690 | Msa1277260 | 0.830594 | 2.689305e-55 | -8.615850e-47 |
| Msa0584260 | Msa1277260 | 0.801498 | 8.753274e-49 | -8.615850e-47 |
| Msa0586420 | Msa1277260 | 0.801384 | 9.235037e-49 | -8.615850e-47 |
| Msa0870750 | Msa1277260 | 0.801946 | 7.081993e-49 | -8.615850e-47 |
| Msa0881530 | Msa1277260 | -0.804693 | 1.910699e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277260 | MtrunA17_Chr8g0345651 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
| Msa1277260 | MtrunA17_Chr3g0084381 | 33.562 | 292 | 141 | 7 | 70 | 358 | 50 | 291 | 5.08e-43 | 150 |
| Msa1277260 | MtrunA17_Chr1g0176411 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.56e-20 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1277260 | AT4G01560.1 | 73.669 | 357 | 79 | 4 | 3 | 358 | 1 | 343 | 0.0 | 528 |
| Msa1277260 | AT1G63780.1 | 38.776 | 245 | 122 | 6 | 117 | 358 | 73 | 292 | 9.07e-46 | 158 |
Find 96 sgRNAs with CRISPR-Local
Find 390 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGATGCTCTCTTGATTAT+TGG | 0.136869 | 8_3:-12450171 | Msa1277260:intron |
| CTTCGACTTGTGTCCATTTC+CGG | 0.170540 | 8_3:+12447893 | None:intergenic |
| TATTCATTCGTGACGAATTT+AGG | 0.200166 | 8_3:-12447543 | Msa1277260:three_prime_UTR |
| TGTCTTGGAACTTTGCATTT+TGG | 0.220254 | 8_3:-12447851 | Msa1277260:three_prime_UTR |
| CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8_3:-12449228 | Msa1277260:CDS |
| CCCTTTAAACTCGGGATCTT+GGG | 0.231737 | 8_3:+12449227 | None:intergenic |
| TTCCGTTTCTGTTTCCGTTC+TGG | 0.284839 | 8_3:+12453499 | None:intergenic |
| CAGCTGGAACTTGGTTAATC+TGG | 0.296287 | 8_3:-12447819 | Msa1277260:three_prime_UTR |
| GCCCTTTAAACTCGGGATCT+TGG | 0.298570 | 8_3:+12449226 | None:intergenic |
| TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8_3:-12448977 | Msa1277260:intron |
| GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8_3:+12450746 | None:intergenic |
| ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8_3:-12450816 | Msa1277260:intron |
| TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8_3:-12450498 | Msa1277260:CDS |
| AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8_3:+12450144 | None:intergenic |
| CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8_3:+12450470 | None:intergenic |
| CCCAAGATCCCGAGTTTAAA+GGG | 0.366033 | 8_3:-12449227 | Msa1277260:CDS |
| TTTCCACCGATCGCCATTGT+AGG | 0.381132 | 8_3:+12453575 | None:intergenic |
| TGTTGAATATGCAAACAAAA+AGG | 0.392477 | 8_3:-12450327 | Msa1277260:CDS |
| AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8_3:+12453167 | None:intergenic |
| ATTAAACTTAGAGATCTCTA+TGG | 0.431932 | 8_3:+12447590 | None:intergenic |
| TCAACAAACATATAGATTTG+TGG | 0.437200 | 8_3:+12447675 | None:intergenic |
| TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8_3:-12449670 | Msa1277260:intron |
| TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8_3:+12453468 | None:intergenic |
| ACTGCATTTCAGCTGGAACT+TGG | 0.475547 | 8_3:-12447828 | Msa1277260:three_prime_UTR |
| AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8_3:+12449643 | None:intergenic |
| CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8_3:-12450730 | Msa1277260:intron |
| GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8_3:+12449644 | None:intergenic |
| GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8_3:+12453230 | None:intergenic |
| TGTCAAATGTTCCATGCTGC+AGG | 0.481553 | 8_3:+12448065 | None:intergenic |
| ATCACACTGAAGGCTTTCAT+AGG | 0.487342 | 8_3:+12447466 | None:intergenic |
| ATATGAAGTCTCTCTGGTTG+TGG | 0.489756 | 8_3:+12449187 | None:intergenic |
| AACCAGAACGGAAACAGAAA+CGG | 0.491238 | 8_3:-12453501 | Msa1277260:CDS |
| AGAGAGACTTCATATTCTTC+CGG | 0.494821 | 8_3:-12449179 | Msa1277260:CDS |
| CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8_3:-12453214 | Msa1277260:CDS |
| TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8_3:+12449218 | None:intergenic |
| CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8_3:+12449639 | None:intergenic |
| CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8_3:+12450747 | None:intergenic |
| CTTCTTCTGATGCTTAAGCT+TGG | 0.508564 | 8_3:+12453415 | None:intergenic |
| AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8_3:+12449628 | None:intergenic |
| CCTTTAAACTCGGGATCTTG+GGG | 0.514110 | 8_3:+12449228 | None:intergenic |
| GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8_3:-12453240 | Msa1277260:intron |
| TTGATTATTGGCTTACCTGA+AGG | 0.520117 | 8_3:-12450159 | Msa1277260:CDS |
| TCATATTCTTCCGGCATCAT+CGG | 0.521685 | 8_3:-12449170 | Msa1277260:intron |
| GGAAGAATATGAAGTCTCTC+TGG | 0.523080 | 8_3:+12449181 | None:intergenic |
| CCTACTTGGTTCCCTACGAT+TGG | 0.527299 | 8_3:+12450277 | None:intergenic |
| AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8_3:+12450503 | None:intergenic |
| AACAACTTCACAACACGCCT+AGG | 0.543084 | 8_3:-12449613 | Msa1277260:CDS |
| TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8_3:+12453458 | None:intergenic |
| GGAACATTTGACACTAAAAG+TGG | 0.547527 | 8_3:-12448055 | Msa1277260:CDS |
| CTAAAAGTGGAGAATATGAG+TGG | 0.547620 | 8_3:-12448042 | Msa1277260:CDS |
| ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8_3:+12448966 | None:intergenic |
| CGCGGTGGTTATTCCTACAA+TGG | 0.565034 | 8_3:-12453588 | Msa1277260:exon |
| CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8_3:-12453571 | Msa1277260:CDS |
| TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8_3:+12453467 | None:intergenic |
| GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8_3:+12450135 | None:intergenic |
| ATCAGTGTTGTGTACAAAGA+TGG | 0.576657 | 8_3:+12447708 | None:intergenic |
| AAGTTCCAAGACAAGGTCAC+AGG | 0.582687 | 8_3:+12447861 | None:intergenic |
| TAGGAATAACCACCGCGCGA+GGG | 0.584404 | 8_3:+12453594 | None:intergenic |
| AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8_3:+12449160 | None:intergenic |
| GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8_3:-12453353 | Msa1277260:CDS |
| AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8_3:+12448965 | None:intergenic |
| TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8_3:+12453462 | None:intergenic |
| TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8_3:-12453174 | Msa1277260:intron |
| GAAGTCTCTCTGGTTGTGGA+AGG | 0.594781 | 8_3:+12449191 | None:intergenic |
| TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8_3:+12449632 | None:intergenic |
| AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8_3:-12450779 | Msa1277260:CDS |
| ACCTTCCAACTCGATGCCCT+AGG | 0.597115 | 8_3:+12449596 | None:intergenic |
| AGAATATGAGTGGGTTCACA+AGG | 0.597660 | 8_3:-12448032 | Msa1277260:intron |
| GGAAACAGAAACGGAAACGA+AGG | 0.598065 | 8_3:-12453492 | Msa1277260:CDS |
| TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8_3:+12453233 | None:intergenic |
| TTCATAGGCTAGATGATGCA+AGG | 0.601774 | 8_3:+12447481 | None:intergenic |
| TAGTTGTACACACCAATCGT+AGG | 0.607640 | 8_3:-12450289 | Msa1277260:CDS |
| CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8_3:+12450731 | None:intergenic |
| GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8_3:-12453581 | Msa1277260:exon |
| AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8_3:-12453345 | Msa1277260:intron |
| AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8_3:+12450724 | None:intergenic |
| GTGTTGTGTACAAAGATGGT+AGG | 0.617202 | 8_3:+12447712 | None:intergenic |
| TTAACTTCAATGTGAAACGA+GGG | 0.623098 | 8_3:+12448092 | None:intergenic |
| ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8_3:+12449219 | None:intergenic |
| CGGAAATGGACACAAGTCGA+AGG | 0.626913 | 8_3:-12447892 | Msa1277260:CDS |
| TCATTCGTGACGAATTTAGG+TGG | 0.627239 | 8_3:-12447540 | Msa1277260:three_prime_UTR |
| GCCTAGGGCATCGAGTTGGA+AGG | 0.627771 | 8_3:-12449597 | Msa1277260:intron |
| ACACGCCTAGGGCATCGAGT+TGG | 0.629464 | 8_3:-12449601 | Msa1277260:CDS |
| ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8_3:-12449612 | Msa1277260:CDS |
| AGTTGTACACACCAATCGTA+GGG | 0.643789 | 8_3:-12450288 | Msa1277260:CDS |
| ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8_3:-12453578 | Msa1277260:exon |
| AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8_3:-12450467 | Msa1277260:CDS |
| AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8_3:-12453548 | Msa1277260:CDS |
| TTCCAAGAGGAAAACCAGAA+CGG | 0.649098 | 8_3:-12453513 | Msa1277260:CDS |
| AAATGCAAAGTTCCAAGACA+AGG | 0.656551 | 8_3:+12447854 | None:intergenic |
| TAAAAGTGGAGAATATGAGT+GGG | 0.666851 | 8_3:-12448041 | Msa1277260:CDS |
| CTTTAAACTCGGGATCTTGG+GGG | 0.666978 | 8_3:+12449229 | None:intergenic |
| AAATGGACACAAGTCGAAGG+AGG | 0.670517 | 8_3:-12447889 | Msa1277260:CDS |
| TTTAACTTCAATGTGAAACG+AGG | 0.679925 | 8_3:+12448091 | None:intergenic |
| GCGAAGATAATTCTTCCAAG+AGG | 0.695487 | 8_3:-12453526 | Msa1277260:CDS |
| GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8_3:-12453213 | Msa1277260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTCTTTTTTTTTTTT+GGG | - | chr8_3:12448873-12448892 | Msa1277260:intron | 10.0% |
| !!! | ATATTTGTTATAATGAAAAA+TGG | + | chr8_3:12451754-12451773 | None:intergenic | 10.0% |
| !!! | AGAATATATATTTTGGTTAT+TGG | - | chr8_3:12448040-12448059 | Msa1277260:CDS | 15.0% |
| !! | TTTAGATAATTAGAAAATGA+TGG | - | chr8_3:12448251-12448270 | Msa1277260:intron | 15.0% |
| !!! | GAACTTAATAGAATATTTTT+AGG | - | chr8_3:12448350-12448369 | Msa1277260:intron | 15.0% |
| !!! | CTGTTTTTCTTTTTTTTTTT+TGG | - | chr8_3:12448872-12448891 | Msa1277260:intron | 15.0% |
| !!! | GTTTTTCTTTTTTTTTTTTG+GGG | - | chr8_3:12448874-12448893 | Msa1277260:intron | 15.0% |
| !!! | AATACTTCTAGTTTTTAAAT+GGG | + | chr8_3:12449073-12449092 | None:intergenic | 15.0% |
| !!! | AAATACTTCTAGTTTTTAAA+TGG | + | chr8_3:12449074-12449093 | None:intergenic | 15.0% |
| !!! | AAATGATGTATTCAATTTTT+TGG | - | chr8_3:12449101-12449120 | Msa1277260:intron | 15.0% |
| !!! | GAGATTAGAAATTTTTTTAA+CGG | + | chr8_3:12449379-12449398 | None:intergenic | 15.0% |
| !! | CAATACTTAAAATATACAAT+GGG | - | chr8_3:12449463-12449482 | Msa1277260:intron | 15.0% |
| !!! | AACTATTTTAAGAGAATTTA+AGG | - | chr8_3:12449929-12449948 | Msa1277260:intron | 15.0% |
| !!! | ACTATTTTAAGAGAATTTAA+GGG | - | chr8_3:12449930-12449949 | Msa1277260:intron | 15.0% |
| !!! | TGTTATTTAAAGATATCTTA+GGG | - | chr8_3:12449990-12450009 | Msa1277260:intron | 15.0% |
| !! | GTTGTTTATAAATATAACAA+TGG | - | chr8_3:12451042-12451061 | Msa1277260:intron | 15.0% |
| !!! | GACTTTTTTTTTTTTTTTAC+AGG | + | chr8_3:12451200-12451219 | None:intergenic | 15.0% |
| !! | AAAAACAAAATCAACAAATA+AGG | + | chr8_3:12451843-12451862 | None:intergenic | 15.0% |
| !! | TGATAATAATACATAAAATG+CGG | + | chr8_3:12452952-12452971 | None:intergenic | 15.0% |
| !!! | TATATAATTTTAACTTGAGA+TGG | - | chr8_3:12453490-12453509 | Msa1277260:CDS | 15.0% |
| !! | CCAATCATACATAAAAATTT+AGG | + | chr8_3:12447996-12448015 | None:intergenic | 20.0% |
| !!! | CCTAAATTTTTATGTATGAT+TGG | - | chr8_3:12447993-12448012 | Msa1277260:intron | 20.0% |
| !!! | TGAGTGTAGAATATATATTT+TGG | - | chr8_3:12448033-12448052 | Msa1277260:CDS | 20.0% |
| !!! | ATATTTTTAGGTTTCAAAGT+TGG | - | chr8_3:12448362-12448381 | Msa1277260:intron | 20.0% |
| !!! | TGTTAGGATTTTATTATCAA+AGG | - | chr8_3:12448406-12448425 | Msa1277260:intron | 20.0% |
| !!! | GTTAGGATTTTATTATCAAA+GGG | - | chr8_3:12448407-12448426 | Msa1277260:intron | 20.0% |
| !! | ATCCATTCATTTATTTGAAT+AGG | - | chr8_3:12448742-12448761 | Msa1277260:intron | 20.0% |
| !!! | AAAAACTAGAAGTATTTTGT+TGG | - | chr8_3:12449077-12449096 | Msa1277260:intron | 20.0% |
| !! | GCAATACTTAAAATATACAA+TGG | - | chr8_3:12449462-12449481 | Msa1277260:intron | 20.0% |
| !!! | AAAATATACAATGGGTTTTT+TGG | - | chr8_3:12449471-12449490 | Msa1277260:intron | 20.0% |
| !!! | AAATATACAATGGGTTTTTT+GGG | - | chr8_3:12449472-12449491 | Msa1277260:intron | 20.0% |
| !!! | TTTTTTTGCAATCACTTATT+TGG | - | chr8_3:12449607-12449626 | Msa1277260:CDS | 20.0% |
| !!! | TTTTTTGCAATCACTTATTT+GGG | - | chr8_3:12449608-12449627 | Msa1277260:CDS | 20.0% |
| !! | AGAGTATAAACCTATTAATT+TGG | + | chr8_3:12449650-12449669 | None:intergenic | 20.0% |
| !!! | ATTATTTTCAAGGCTTTTAA+AGG | + | chr8_3:12449741-12449760 | None:intergenic | 20.0% |
| !!! | AACAACATCATTATTTTCAA+TGG | + | chr8_3:12449868-12449887 | None:intergenic | 20.0% |
| !! | GAAAATAATGATGTTGTTAA+CGG | - | chr8_3:12449870-12449889 | Msa1277260:intron | 20.0% |
| !! | ATGTCTATTATAAAACTAGA+GGG | - | chr8_3:12449959-12449978 | Msa1277260:intron | 20.0% |
| !!! | GTGTTATTTAAAGATATCTT+AGG | - | chr8_3:12449989-12450008 | Msa1277260:intron | 20.0% |
| !! | GTTATTTAAAGATATCTTAG+GGG | - | chr8_3:12449991-12450010 | Msa1277260:intron | 20.0% |
| !! | TTATTTCCTTTAAGCTTAAA+GGG | + | chr8_3:12450114-12450133 | None:intergenic | 20.0% |
| !! | AACTCTAGATTATATAAACT+AGG | - | chr8_3:12450132-12450151 | Msa1277260:CDS | 20.0% |
| !! | ACTCTAGATTATATAAACTA+GGG | - | chr8_3:12450133-12450152 | Msa1277260:CDS | 20.0% |
| !!! | TTAGTCAACAGAATTTATTT+TGG | + | chr8_3:12450273-12450292 | None:intergenic | 20.0% |
| !! | AATTCAGTTCAATATTAAAG+CGG | - | chr8_3:12450336-12450355 | Msa1277260:intron | 20.0% |
| !! | TATGATTTAAAAAAGGTGAT+GGG | - | chr8_3:12450675-12450694 | Msa1277260:intron | 20.0% |
| !!! | ACAATCTTTAAAATATGAGT+AGG | + | chr8_3:12450884-12450903 | None:intergenic | 20.0% |
| !!! | CTCAATCTTTTTAATTTCTT+TGG | + | chr8_3:12452068-12452087 | None:intergenic | 20.0% |
| !! | ATTAAAAAGATTGAGTCTAA+AGG | - | chr8_3:12452073-12452092 | Msa1277260:intron | 20.0% |
| !! | ACACGAAAAAAAATTCATTA+AGG | - | chr8_3:12452804-12452823 | Msa1277260:intron | 20.0% |
| !! | GAAAAAAAATTCATTAAGGA+TGG | - | chr8_3:12452808-12452827 | Msa1277260:intron | 20.0% |
| !! | TATTTACCTTAATTGATCAA+TGG | - | chr8_3:12452857-12452876 | Msa1277260:intron | 20.0% |
| !!! | AATATTTAAAACAGCAATAC+TGG | + | chr8_3:12453124-12453143 | None:intergenic | 20.0% |
| !!! | CATTTCTCTTATATTTCTAA+CGG | - | chr8_3:12453159-12453178 | Msa1277260:intron | 20.0% |
| !!! | AGAATTTACATTTTGCTTAT+AGG | - | chr8_3:12453466-12453485 | Msa1277260:CDS | 20.0% |
| ! | GAAAAATAAACTATGATGCT+AGG | - | chr8_3:12448112-12448131 | Msa1277260:intron | 25.0% |
| ! | TAATTAGAAAATGATGGTAG+CGG | - | chr8_3:12448257-12448276 | Msa1277260:intron | 25.0% |
| ! | AGTTTCTACGAGAAATTATA+TGG | - | chr8_3:12448302-12448321 | Msa1277260:intron | 25.0% |
| ! | TACGAGAAATTATATGGATT+TGG | - | chr8_3:12448308-12448327 | Msa1277260:intron | 25.0% |
| ! | GGATTTGGCTATTATAAAAT+AGG | - | chr8_3:12448323-12448342 | Msa1277260:intron | 25.0% |
| ! | CACCTATTCAAATAAATGAA+TGG | + | chr8_3:12448747-12448766 | None:intergenic | 25.0% |
| ! | TTTATCACAATTTCGATCAT+TGG | - | chr8_3:12449243-12449262 | Msa1277260:CDS | 25.0% |
| !!! | AATTTCGATCATTGGTTTTT+GGG | - | chr8_3:12449251-12449270 | Msa1277260:intron | 25.0% |
| !! | TCACTTATTTGGGATAAAAA+TGG | - | chr8_3:12449618-12449637 | Msa1277260:CDS | 25.0% |
| ! | ATGGACAAAACCAAATTAAT+AGG | - | chr8_3:12449637-12449656 | Msa1277260:CDS | 25.0% |
| ! | AAAAGCCTTGAAAATAATGA+TGG | - | chr8_3:12449743-12449762 | Msa1277260:intron | 25.0% |
| !!! | ATTTTAAGAGAATTTAAGGG+AGG | - | chr8_3:12449933-12449952 | Msa1277260:intron | 25.0% |
| ! | CATGTCTATTATAAAACTAG+AGG | - | chr8_3:12449958-12449977 | Msa1277260:intron | 25.0% |
| ! | TGTCTATTATAAAACTAGAG+GGG | - | chr8_3:12449960-12449979 | Msa1277260:intron | 25.0% |
| !! | GTTATTTCCTTTAAGCTTAA+AGG | + | chr8_3:12450115-12450134 | None:intergenic | 25.0% |
| !! | TACTCCTAAAAGTGTAAAAT+AGG | + | chr8_3:12450506-12450525 | None:intergenic | 25.0% |
| ! | TTTAATATCAGAATTGCTTC+AGG | - | chr8_3:12450617-12450636 | Msa1277260:intron | 25.0% |
| ! | AGGAACCTATGATTTAAAAA+AGG | - | chr8_3:12450668-12450687 | Msa1277260:intron | 25.0% |
| !!! | CATCACCTTTTTTAAATCAT+AGG | + | chr8_3:12450676-12450695 | None:intergenic | 25.0% |
| ! | CTATGATTTAAAAAAGGTGA+TGG | - | chr8_3:12450674-12450693 | Msa1277260:intron | 25.0% |
| ! | TGTTGAATATGCAAACAAAA+AGG | - | chr8_3:12450788-12450807 | Msa1277260:CDS | 25.0% |
| ! | AAAGTGGAATTCATCTAAAT+AGG | + | chr8_3:12451323-12451342 | None:intergenic | 25.0% |
| ! | AACAAAGTCTAATCAAAAAG+TGG | + | chr8_3:12451339-12451358 | None:intergenic | 25.0% |
| !! | TTTGATTAGACTTTGTTATC+TGG | - | chr8_3:12451342-12451361 | Msa1277260:intron | 25.0% |
| ! | CTAAGCAGTAAGTATTATTA+TGG | - | chr8_3:12451676-12451695 | Msa1277260:intron | 25.0% |
| ! | ATTATAACAAATATCTCCTC+TGG | - | chr8_3:12451760-12451779 | Msa1277260:intron | 25.0% |
| !! | TGCCATTTGTTTCAAATTAT+TGG | - | chr8_3:12451992-12452011 | Msa1277260:intron | 25.0% |
| !! | CACCAATAATTTGAAACAAA+TGG | + | chr8_3:12451997-12452016 | None:intergenic | 25.0% |
| !! | AATTTACATTGACTAGTCAA+TGG | + | chr8_3:12452217-12452236 | None:intergenic | 25.0% |
| !!! | TTTTCATTGCTTTTATTGTG+TGG | - | chr8_3:12452273-12452292 | Msa1277260:intron | 25.0% |
| ! | ACGCAAGTTATATATAATAG+TGG | - | chr8_3:12452300-12452319 | Msa1277260:intron | 25.0% |
| !!! | AATTCACTTTAAGAGAGTTT+TGG | + | chr8_3:12452599-12452618 | None:intergenic | 25.0% |
| ! | TAACTTAATGACTAACAAAG+GGG | + | chr8_3:12452647-12452666 | None:intergenic | 25.0% |
| ! | GTAACTTAATGACTAACAAA+GGG | + | chr8_3:12452648-12452667 | None:intergenic | 25.0% |
| ! | TAGAAGAATACTTAAATCCT+TGG | + | chr8_3:12452896-12452915 | None:intergenic | 25.0% |
| !! | TGTTGTTATCTTGAAGTTTT+TGG | - | chr8_3:12453323-12453342 | Msa1277260:intron | 25.0% |
| ! | TCAACAAACATATAGATTTG+TGG | + | chr8_3:12453443-12453462 | None:intergenic | 25.0% |
| ! | ATTAAACTTAGAGATCTCTA+TGG | + | chr8_3:12453528-12453547 | None:intergenic | 25.0% |
| ! | TTTTCGAAGAGAAGAAGAAA+AGG | + | chr8_3:12447500-12447519 | None:intergenic | 30.0% |
| TCTTTGTTCTTAATCATCGA+AGG | + | chr8_3:12447660-12447679 | None:intergenic | 30.0% | |
| ! | CTTGTATTTTCAATCGTCTT+CGG | + | chr8_3:12447903-12447922 | None:intergenic | 30.0% |
| GAAGACGATTGAAAATACAA+GGG | - | chr8_3:12447902-12447921 | Msa1277260:intron | 30.0% | |
| TACACTGTGAGATTTGAATT+AGG | - | chr8_3:12448078-12448097 | Msa1277260:CDS | 30.0% | |
| !! | AAGGAAACTTAGTTTGTAGT+TGG | - | chr8_3:12448462-12448481 | Msa1277260:intron | 30.0% |
| !!! | TTTAGTCATGCGTTTTGATT+TGG | - | chr8_3:12448514-12448533 | Msa1277260:intron | 30.0% |
| ! | ATATGACAATTTGGGTTCTT+TGG | - | chr8_3:12448595-12448614 | Msa1277260:intron | 30.0% |
| ! | CAACTTGTTTGTTCTATGAA+TGG | - | chr8_3:12448712-12448731 | Msa1277260:intron | 30.0% |
| GTTTGTTCTATGAATGGTAT+TGG | - | chr8_3:12448718-12448737 | Msa1277260:intron | 30.0% | |
| !!! | CAATTTCGATCATTGGTTTT+TGG | - | chr8_3:12449250-12449269 | Msa1277260:CDS | 30.0% |
| GACATTTACACAAAGCTTAA+GGG | + | chr8_3:12449293-12449312 | None:intergenic | 30.0% | |
| TGACATTTACACAAAGCTTA+AGG | + | chr8_3:12449294-12449313 | None:intergenic | 30.0% | |
| TTGTCATGTGAGAAAATAGA+GGG | + | chr8_3:12449325-12449344 | None:intergenic | 30.0% | |
| TTTGTCATGTGAGAAAATAG+AGG | + | chr8_3:12449326-12449345 | None:intergenic | 30.0% | |
| AGTATTGCAATATGCTTTCA+TGG | + | chr8_3:12449450-12449469 | None:intergenic | 30.0% | |
| AAATGATCTGAATCAACATG+TGG | + | chr8_3:12449573-12449592 | None:intergenic | 30.0% | |
| AATAGGTTTATACTCTGCAA+CGG | - | chr8_3:12449654-12449673 | Msa1277260:CDS | 30.0% | |
| ! | CCATTGTTGTAAACTTTTCA+AGG | + | chr8_3:12449798-12449817 | None:intergenic | 30.0% |
| CCTTGAAAAGTTTACAACAA+TGG | - | chr8_3:12449795-12449814 | Msa1277260:intron | 30.0% | |
| ACAACAATGGCAGTAATATT+CGG | - | chr8_3:12449808-12449827 | Msa1277260:intron | 30.0% | |
| TTAACAGTGTTAAGTCACAA+AGG | - | chr8_3:12449897-12449916 | Msa1277260:intron | 30.0% | |
| TAACAGTGTTAAGTCACAAA+GGG | - | chr8_3:12449898-12449917 | Msa1277260:intron | 30.0% | |
| GTCTATTATAAAACTAGAGG+GGG | - | chr8_3:12449961-12449980 | Msa1277260:intron | 30.0% | |
| ATTTAAAGATATCTTAGGGG+AGG | - | chr8_3:12449994-12450013 | Msa1277260:intron | 30.0% | |
| GCTATTCAACGAAAAATCAA+GGG | + | chr8_3:12450033-12450052 | None:intergenic | 30.0% | |
| AGCTATTCAACGAAAAATCA+AGG | + | chr8_3:12450034-12450053 | None:intergenic | 30.0% | |
| ACGAAACAAGAGTAATTCTT+GGG | - | chr8_3:12450165-12450184 | Msa1277260:CDS | 30.0% | |
| CAAGTGGTGATTAATATCTT+GGG | + | chr8_3:12450371-12450390 | None:intergenic | 30.0% | |
| AAATCAAATCAAGAAGGCAA+GGG | + | chr8_3:12450478-12450497 | None:intergenic | 30.0% | |
| ! | GCATCCTATTTTACACTTTT+AGG | - | chr8_3:12450499-12450518 | Msa1277260:CDS | 30.0% |
| AGCAATTCTGATATTAAAGC+AGG | + | chr8_3:12450615-12450634 | None:intergenic | 30.0% | |
| ! | TGTTTTACGCAAGGATATTA+AGG | - | chr8_3:12451009-12451028 | Msa1277260:intron | 30.0% |
| TTCCACTTAAATTCGTAGAT+AGG | - | chr8_3:12451142-12451161 | Msa1277260:intron | 30.0% | |
| TGGCACTAACAATATAAGAA+AGG | + | chr8_3:12451734-12451753 | None:intergenic | 30.0% | |
| ! | ACAGTGTTTCTATGTAATGA+TGG | - | chr8_3:12451786-12451805 | Msa1277260:intron | 30.0% |
| ! | CAGTGTTTCTATGTAATGAT+GGG | - | chr8_3:12451787-12451806 | Msa1277260:intron | 30.0% |
| AATATACCTAAGAACGTGAT+TGG | + | chr8_3:12452038-12452057 | None:intergenic | 30.0% | |
| ! | CAAATTATTGACTAGTAGTC+TGG | - | chr8_3:12452354-12452373 | Msa1277260:intron | 30.0% |
| ATTGTCTACTCATGTGATTT+AGG | - | chr8_3:12452385-12452404 | Msa1277260:intron | 30.0% | |
| AGTAGTAGTAAAAGGAAGAT+AGG | - | chr8_3:12452436-12452455 | Msa1277260:intron | 30.0% | |
| CGTAACTTAATGACTAACAA+AGG | + | chr8_3:12452649-12452668 | None:intergenic | 30.0% | |
| CTATTTATTAAGTGCATGTG+AGG | + | chr8_3:12452701-12452720 | None:intergenic | 30.0% | |
| CTCACATGCACTTAATAAAT+AGG | - | chr8_3:12452699-12452718 | Msa1277260:intron | 30.0% | |
| ACATGCACTTAATAAATAGG+AGG | - | chr8_3:12452702-12452721 | Msa1277260:intron | 30.0% | |
| AGATTGCCATTGATCAATTA+AGG | + | chr8_3:12452866-12452885 | None:intergenic | 30.0% | |
| AATACTAAGCCAAAACATGA+AGG | + | chr8_3:12452926-12452945 | None:intergenic | 30.0% | |
| TAATTTCCCCTTAAAAATGC+AGG | - | chr8_3:12452993-12453012 | Msa1277260:intron | 30.0% | |
| TTAACTTCAATGTGAAACGA+GGG | + | chr8_3:12453026-12453045 | None:intergenic | 30.0% | |
| ! | TTTAACTTCAATGTGAAACG+AGG | + | chr8_3:12453027-12453046 | None:intergenic | 30.0% |
| TAAAAGTGGAGAATATGAGT+GGG | - | chr8_3:12453074-12453093 | Msa1277260:intron | 30.0% | |
| TATTCATTCGTGACGAATTT+AGG | - | chr8_3:12453572-12453591 | Msa1277260:CDS | 30.0% | |
| TGTTCTTAATCATCGAAGGA+CGG | + | chr8_3:12447656-12447675 | None:intergenic | 35.0% | |
| GTTAAAAGAGCTATTGAGCT+CGG | - | chr8_3:12447762-12447781 | Msa1277260:three_prime_UTR | 35.0% | |
| CGAAGACGATTGAAAATACA+AGG | - | chr8_3:12447901-12447920 | Msa1277260:intron | 35.0% | |
| TTCCTTAACTAGTGCTCTAA+GGG | + | chr8_3:12448448-12448467 | None:intergenic | 35.0% | |
| TTTCCTTAACTAGTGCTCTA+AGG | + | chr8_3:12448449-12448468 | None:intergenic | 35.0% | |
| !! | AACTTAGTTTGTAGTTGGCT+CGG | - | chr8_3:12448467-12448486 | Msa1277260:intron | 35.0% |
| AAACGCATGACTAAATTGTG+TGG | + | chr8_3:12448509-12448528 | None:intergenic | 35.0% | |
| ! | AGAAAATTCGAAAGGGGTTT+TGG | - | chr8_3:12448562-12448581 | Msa1277260:intron | 35.0% |
| TCGTATGGCATATGACAATT+TGG | - | chr8_3:12448586-12448605 | Msa1277260:intron | 35.0% | |
| CGTATGGCATATGACAATTT+GGG | - | chr8_3:12448587-12448606 | Msa1277260:intron | 35.0% | |
| ! | TTTTTCTGCTTTGTGTGTGT+TGG | - | chr8_3:12448901-12448920 | Msa1277260:intron | 35.0% |
| CGACAGAAATTCTAAACAAC+AGG | + | chr8_3:12448981-12449000 | None:intergenic | 35.0% | |
| ATTTACACAAAGCTTAAGGG+AGG | + | chr8_3:12449290-12449309 | None:intergenic | 35.0% | |
| TGTCATGTGAGAAAATAGAG+GGG | + | chr8_3:12449324-12449343 | None:intergenic | 35.0% | |
| !!! | GAGTGTGGGTATCATTTTTT+AGG | + | chr8_3:12449420-12449439 | None:intergenic | 35.0% |
| ATTGCAATATGCTTTCATGG+TGG | + | chr8_3:12449447-12449466 | None:intergenic | 35.0% | |
| AATCAACATGTGGATAGGAA+CGG | + | chr8_3:12449563-12449582 | None:intergenic | 35.0% | |
| ATCTGAATCAACATGTGGAT+AGG | + | chr8_3:12449568-12449587 | None:intergenic | 35.0% | |
| ! | TATACTCTGCAACGGTTTTA+TGG | - | chr8_3:12449662-12449681 | Msa1277260:intron | 35.0% |
| !! | ATACTCTGCAACGGTTTTAT+GGG | - | chr8_3:12449663-12449682 | Msa1277260:intron | 35.0% |
| !!! | GTAATATTCGGTGGTTTTAG+TGG | - | chr8_3:12449820-12449839 | Msa1277260:intron | 35.0% |
| !! | AACTTTAGAGTGTAAAGTGC+AGG | + | chr8_3:12450060-12450079 | None:intergenic | 35.0% |
| TCCTTTAAGCTTAAAGGGAT+GGG | + | chr8_3:12450109-12450128 | None:intergenic | 35.0% | |
| TTCCTTTAAGCTTAAAGGGA+TGG | + | chr8_3:12450110-12450129 | None:intergenic | 35.0% | |
| ! | AGAATTACTCTTGTTTCGTG+TGG | + | chr8_3:12450164-12450183 | None:intergenic | 35.0% |
| CACGAAACAAGAGTAATTCT+TGG | - | chr8_3:12450164-12450183 | Msa1277260:CDS | 35.0% | |
| ATTTGTTTGCAGCTATTTGC+TGG | - | chr8_3:12450299-12450318 | Msa1277260:CDS | 35.0% | |
| GCAAGTGGTGATTAATATCT+TGG | + | chr8_3:12450372-12450391 | None:intergenic | 35.0% | |
| AACATACCGTAGAATTGAAG+CGG | + | chr8_3:12450394-12450413 | None:intergenic | 35.0% | |
| GAATACAAACAACAGACTAG+AGG | + | chr8_3:12450418-12450437 | None:intergenic | 35.0% | |
| CAAATCAAATCAAGAAGGCA+AGG | + | chr8_3:12450479-12450498 | None:intergenic | 35.0% | |
| ! | CTTGCCTTCTTGATTTGATT+TGG | - | chr8_3:12450477-12450496 | Msa1277260:CDS | 35.0% |
| GATGCCAAATCAAATCAAGA+AGG | + | chr8_3:12450484-12450503 | None:intergenic | 35.0% | |
| GTCAAAAATCAACAGACAGA+TGG | + | chr8_3:12450575-12450594 | None:intergenic | 35.0% | |
| !!! | ATTTTTGACTTCATCTGCAG+AGG | - | chr8_3:12450586-12450605 | Msa1277260:intron | 35.0% |
| !!! | TTTTTGACTTCATCTGCAGA+GGG | - | chr8_3:12450587-12450606 | Msa1277260:intron | 35.0% |
| CTCTTGAAGTAATGTGCATT+TGG | + | chr8_3:12450648-12450667 | None:intergenic | 35.0% | |
| AATGCACATTACTTCAAGAG+AGG | - | chr8_3:12450648-12450667 | Msa1277260:intron | 35.0% | |
| TGAGTAGGATCTTTACTCAA+AGG | + | chr8_3:12450869-12450888 | None:intergenic | 35.0% | |
| !! | CAAGAGAGCATCTGAAAAAT+AGG | + | chr8_3:12450939-12450958 | None:intergenic | 35.0% |
| TCAGATGCTCTCTTGATTAT+TGG | - | chr8_3:12450944-12450963 | Msa1277260:intron | 35.0% | |
| !! | TTGATTATTGGCTTACCTGA+AGG | - | chr8_3:12450956-12450975 | Msa1277260:intron | 35.0% |
| !!! | CACAAATCTTGTTTTACGCA+AGG | - | chr8_3:12451000-12451019 | Msa1277260:intron | 35.0% |
| CTCCTATCTACGAATTTAAG+TGG | + | chr8_3:12451147-12451166 | None:intergenic | 35.0% | |
| AAATAGGTAAGACAAAGTGC+AGG | + | chr8_3:12451307-12451326 | None:intergenic | 35.0% | |
| AGAGAGACTTCATATTCTTC+CGG | - | chr8_3:12451936-12451955 | Msa1277260:intron | 35.0% | |
| GTCTAAAGGTAAAAATGACG+AGG | - | chr8_3:12452087-12452106 | Msa1277260:intron | 35.0% | |
| AAAGGTAAAAATGACGAGGA+TGG | - | chr8_3:12452091-12452110 | Msa1277260:intron | 35.0% | |
| CCATTGAGTTTGAAAATGGA+AGG | + | chr8_3:12452194-12452213 | None:intergenic | 35.0% | |
| ! | CCTTCCATTTTCAAACTCAA+TGG | - | chr8_3:12452191-12452210 | Msa1277260:intron | 35.0% |
| ATGGCCATTGAGTTTGAAAA+TGG | + | chr8_3:12452198-12452217 | None:intergenic | 35.0% | |
| GCGTTGAAAGTAGTAGTAAA+AGG | - | chr8_3:12452428-12452447 | Msa1277260:intron | 35.0% | |
| !!! | TTTTGGAATTTCAGAGTTGC+AGG | + | chr8_3:12452582-12452601 | None:intergenic | 35.0% |
| ATGGCAATCTAATGTTACCA+AGG | - | chr8_3:12452876-12452895 | Msa1277260:intron | 35.0% | |
| ! | TACCTGATTCCTTCATGTTT+TGG | - | chr8_3:12452914-12452933 | Msa1277260:intron | 35.0% |
| TTAAGGGGAAATTATTGCTG+AGG | + | chr8_3:12452987-12453006 | None:intergenic | 35.0% | |
| GGAACATTTGACACTAAAAG+TGG | - | chr8_3:12453060-12453079 | Msa1277260:intron | 35.0% | |
| CTAAAAGTGGAGAATATGAG+TGG | - | chr8_3:12453073-12453092 | Msa1277260:intron | 35.0% | |
| AAATGCAAAGTTCCAAGACA+AGG | + | chr8_3:12453264-12453283 | None:intergenic | 35.0% | |
| ! | TGTCTTGGAACTTTGCATTT+TGG | - | chr8_3:12453264-12453283 | Msa1277260:intron | 35.0% |
| ATCAGTGTTGTGTACAAAGA+TGG | + | chr8_3:12453410-12453429 | None:intergenic | 35.0% | |
| GTTATTCCTACAATGGCGAT+CGG | - | chr8_3:12447534-12447553 | Msa1277260:three_prime_UTR | 40.0% | |
| AAGCGCAACAATGATTCAGA+CGG | - | chr8_3:12447567-12447586 | Msa1277260:three_prime_UTR | 40.0% | |
| GCGAAGATAATTCTTCCAAG+AGG | - | chr8_3:12447589-12447608 | Msa1277260:three_prime_UTR | 40.0% | |
| TTCCAAGAGGAAAACCAGAA+CGG | - | chr8_3:12447602-12447621 | Msa1277260:three_prime_UTR | 40.0% | |
| AACCAGAACGGAAACAGAAA+CGG | - | chr8_3:12447614-12447633 | Msa1277260:three_prime_UTR | 40.0% | |
| TTAATCATCGAAGGACGGAA+CGG | + | chr8_3:12447651-12447670 | None:intergenic | 40.0% | |
| CTTCTTCTGATGCTTAAGCT+TGG | + | chr8_3:12447703-12447722 | None:intergenic | 40.0% | |
| AACTCAACCTCTTCATCATC+AGG | + | chr8_3:12447951-12447970 | None:intergenic | 40.0% | |
| ! | ATCAGCTTCAAGTTTGTCAG+TGG | + | chr8_3:12448223-12448242 | None:intergenic | 40.0% |
| CAACAGTTAGAGCAACTGTT+AGG | - | chr8_3:12448390-12448409 | Msa1277260:intron | 40.0% | |
| AGCCGAGAAGAAAATTCGAA+AGG | - | chr8_3:12448554-12448573 | Msa1277260:intron | 40.0% | |
| GCCGAGAAGAAAATTCGAAA+GGG | - | chr8_3:12448555-12448574 | Msa1277260:intron | 40.0% | |
| ! | CCCCTTTCGAATTTTCTTCT+CGG | + | chr8_3:12448559-12448578 | None:intergenic | 40.0% |
| CCGAGAAGAAAATTCGAAAG+GGG | - | chr8_3:12448556-12448575 | Msa1277260:intron | 40.0% | |
| ! | GATAGTTGATGCTAACGAGA+TGG | - | chr8_3:12448654-12448673 | Msa1277260:intron | 40.0% |
| ! | CATCATGTTTTCTTGCCTTC+TGG | - | chr8_3:12448822-12448841 | Msa1277260:intron | 40.0% |
| CTTTGTGTGTGTTGGATTGT+TGG | - | chr8_3:12448909-12448928 | Msa1277260:intron | 40.0% | |
| AGAAACACACCAGTAAGGAA+TGG | + | chr8_3:12449511-12449530 | None:intergenic | 40.0% | |
| TCACTAGAAACACACCAGTA+AGG | + | chr8_3:12449516-12449535 | None:intergenic | 40.0% | |
| !! | TACTCTGCAACGGTTTTATG+GGG | - | chr8_3:12449664-12449683 | Msa1277260:intron | 40.0% |
| ! | CGCTGCCATCATTATTTTCA+AGG | + | chr8_3:12449751-12449770 | None:intergenic | 40.0% |
| ACAATGGCAGTAATATTCGG+TGG | - | chr8_3:12449811-12449830 | Msa1277260:intron | 40.0% | |
| !!! | ATATTCGGTGGTTTTAGTGG+AGG | - | chr8_3:12449823-12449842 | Msa1277260:intron | 40.0% |
| !! | GTAGGAGAACTTTAGAGTGT+AGG | + | chr8_3:12450067-12450086 | None:intergenic | 40.0% |
| ACCCATCCCTTTAAGCTTAA+AGG | - | chr8_3:12450105-12450124 | Msa1277260:intron | 40.0% | |
| TTTAGGAGTAAGAGTCGAGT+TGG | - | chr8_3:12450516-12450535 | Msa1277260:intron | 40.0% | |
| !!! | TTTTGACTTCATCTGCAGAG+GGG | - | chr8_3:12450588-12450607 | Msa1277260:intron | 40.0% |
| !!! | CTGACTGCTTTTTATCCACA+CGG | + | chr8_3:12450720-12450739 | None:intergenic | 40.0% |
| TAGTTGTACACACCAATCGT+AGG | - | chr8_3:12450826-12450845 | Msa1277260:intron | 40.0% | |
| AGTTGTACACACCAATCGTA+GGG | - | chr8_3:12450827-12450846 | Msa1277260:intron | 40.0% | |
| GCATCTGAAAAATAGGAGCA+AGG | + | chr8_3:12450932-12450951 | None:intergenic | 40.0% | |
| ! | GTGAGTTTGAAATGAGCAGT+AGG | + | chr8_3:12450983-12451002 | None:intergenic | 40.0% |
| TCTGATCTCCTCATTGATGT+CGG | - | chr8_3:12451077-12451096 | Msa1277260:intron | 40.0% | |
| AATGTACACCGACATCAATG+AGG | + | chr8_3:12451088-12451107 | None:intergenic | 40.0% | |
| AAGTTGTTCAACACAAGCTC+AGG | + | chr8_3:12451490-12451509 | None:intergenic | 40.0% | |
| AAATGTGATATGCCCATGCT+AGG | - | chr8_3:12451619-12451638 | Msa1277260:intron | 40.0% | |
| ATTTCAGTCAGACCTAGCAT+GGG | + | chr8_3:12451634-12451653 | None:intergenic | 40.0% | |
| TATTTCAGTCAGACCTAGCA+TGG | + | chr8_3:12451635-12451654 | None:intergenic | 40.0% | |
| CTGCTTAGAAAACAACTGAC+AGG | + | chr8_3:12451664-12451683 | None:intergenic | 40.0% | |
| ATAGAAACACTGTGAACCAG+AGG | + | chr8_3:12451779-12451798 | None:intergenic | 40.0% | |
| ATATGAAGTCTCTCTGGTTG+TGG | + | chr8_3:12451931-12451950 | None:intergenic | 40.0% | |
| GGAAGAATATGAAGTCTCTC+TGG | + | chr8_3:12451937-12451956 | None:intergenic | 40.0% | |
| TCATATTCTTCCGGCATCAT+CGG | - | chr8_3:12451945-12451964 | Msa1277260:intron | 40.0% | |
| ! | AAGAATTGTACCGATGATGC+CGG | + | chr8_3:12451958-12451977 | None:intergenic | 40.0% |
| ATGTGTCCAATCACGTTCTT+AGG | - | chr8_3:12452029-12452048 | Msa1277260:intron | 40.0% | |
| !! | GAAGACGGGCAATTGTTTTA+TGG | + | chr8_3:12452138-12452157 | None:intergenic | 40.0% |
| TAAAACAATTGCCCGTCTTC+AGG | - | chr8_3:12452138-12452157 | Msa1277260:intron | 40.0% | |
| AATTGACACCAACCTGAAGA+CGG | + | chr8_3:12452153-12452172 | None:intergenic | 40.0% | |
| GAAAGAGGTTTGCAATGCAT+TGG | + | chr8_3:12452494-12452513 | None:intergenic | 40.0% | |
| GAGCTATAATGGCAAGAAAG+AGG | + | chr8_3:12452509-12452528 | None:intergenic | 40.0% | |
| TTCTTGCCATTATAGCTCAG+TGG | - | chr8_3:12452511-12452530 | Msa1277260:intron | 40.0% | |
| AGTCTACCACTGAGCTATAA+TGG | + | chr8_3:12452520-12452539 | None:intergenic | 40.0% | |
| ATTATAGCTCAGTGGTAGAC+TGG | - | chr8_3:12452519-12452538 | Msa1277260:intron | 40.0% | |
| CTTAATGACTAACAAAGGGG+AGG | + | chr8_3:12452644-12452663 | None:intergenic | 40.0% | |
| TTAAGTGCATGTGAGGATTG+AGG | + | chr8_3:12452694-12452713 | None:intergenic | 40.0% | |
| AGCCAAAACATGAAGGAATC+AGG | + | chr8_3:12452919-12452938 | None:intergenic | 40.0% | |
| !! | CGCATTCCTGCATTTTTAAG+GGG | + | chr8_3:12453002-12453021 | None:intergenic | 40.0% |
| ! | CCGCATTCCTGCATTTTTAA+GGG | + | chr8_3:12453003-12453022 | None:intergenic | 40.0% |
| CCCTTAAAAATGCAGGAATG+CGG | - | chr8_3:12453000-12453019 | Msa1277260:intron | 40.0% | |
| AAGTTAAAAAGCCTGCAGCA+TGG | - | chr8_3:12453039-12453058 | Msa1277260:intron | 40.0% | |
| ! | AGAATATGAGTGGGTTCACA+AGG | - | chr8_3:12453083-12453102 | Msa1277260:intron | 40.0% |
| ! | TGCCTTCTTTTCCTTTTAGC+CGG | - | chr8_3:12453203-12453222 | Msa1277260:CDS | 40.0% |
| TTCCGGCTAAAAGGAAAAGA+AGG | + | chr8_3:12453208-12453227 | None:intergenic | 40.0% | |
| ! | CTTTTCCTTTTAGCCGGAAA+TGG | - | chr8_3:12453209-12453228 | Msa1277260:CDS | 40.0% |
| ! | TTTTTCCTGTGACCTTGTCT+TGG | - | chr8_3:12453249-12453268 | Msa1277260:intron | 40.0% |
| ! | ATTTTGGACTGCATTTCAGC+TGG | - | chr8_3:12453280-12453299 | Msa1277260:intron | 40.0% |
| GTGTTGTGTACAAAGATGGT+AGG | + | chr8_3:12453406-12453425 | None:intergenic | 40.0% | |
| TCATTCGTGACGAATTTAGG+TGG | - | chr8_3:12453575-12453594 | Msa1277260:exon | 40.0% | |
| TTCATAGGCTAGATGATGCA+AGG | + | chr8_3:12453637-12453656 | None:intergenic | 40.0% | |
| !!! | TTCCGTTCTGGTTTTCCTCT+TGG | + | chr8_3:12447607-12447626 | None:intergenic | 45.0% |
| TTCCGTTTCTGTTTCCGTTC+TGG | + | chr8_3:12447619-12447638 | None:intergenic | 45.0% | |
| GGAAACAGAAACGGAAACGA+AGG | - | chr8_3:12447623-12447642 | Msa1277260:three_prime_UTR | 45.0% | |
| TAATCATCGAAGGACGGAAC+GGG | + | chr8_3:12447650-12447669 | None:intergenic | 45.0% | |
| CGAAAAACGCGCTAAGTCTA+AGG | - | chr8_3:12447725-12447744 | Msa1277260:three_prime_UTR | 45.0% | |
| ! | TTGTGTGTTGTTGTAGCCTC+CGG | - | chr8_3:12447866-12447885 | Msa1277260:exon | 45.0% |
| ! | TTGCAAGCCTGATGATGAAG+AGG | - | chr8_3:12447941-12447960 | Msa1277260:intron | 45.0% |
| ! | TGCCCTTAGAGCACTAGTTA+AGG | - | chr8_3:12448443-12448462 | Msa1277260:intron | 45.0% |
| !!! | TAGTTGGCTCGGTTTTGCAT+TGG | - | chr8_3:12448478-12448497 | Msa1277260:intron | 45.0% |
| GCTATGATGACTCGTGCAAA+CGG | + | chr8_3:12448779-12448798 | None:intergenic | 45.0% | |
| TGTGTGTTGGATTGTTGGTG+TGG | - | chr8_3:12448914-12448933 | Msa1277260:intron | 45.0% | |
| GTGTGTTGGATTGTTGGTGT+GGG | - | chr8_3:12448915-12448934 | Msa1277260:intron | 45.0% | |
| TGTGTTGGATTGTTGGTGTG+GGG | - | chr8_3:12448916-12448935 | Msa1277260:intron | 45.0% | |
| !! | TTGCTTAAAGAGTGCCCGTA+GGG | - | chr8_3:12449153-12449172 | Msa1277260:intron | 45.0% |
| TCATGCTAACATGTGCCCTA+CGG | + | chr8_3:12449171-12449190 | None:intergenic | 45.0% | |
| ACTAGACTGCTCTAACAGCT+GGG | + | chr8_3:12449355-12449374 | None:intergenic | 45.0% | |
| AACTAGACTGCTCTAACAGC+TGG | + | chr8_3:12449356-12449375 | None:intergenic | 45.0% | |
| ! | TTCATGGTGGAAGAGAGTGT+GGG | + | chr8_3:12449434-12449453 | None:intergenic | 45.0% |
| ! | TTTCATGGTGGAAGAGAGTG+TGG | + | chr8_3:12449435-12449454 | None:intergenic | 45.0% |
| CGTGTGTTTCCATTCCTTAC+TGG | - | chr8_3:12449499-12449518 | Msa1277260:intron | 45.0% | |
| TGATGGCAGCGCTAGATATT+TGG | - | chr8_3:12449760-12449779 | Msa1277260:intron | 45.0% | |
| GATGGCAGCGCTAGATATTT+GGG | - | chr8_3:12449761-12449780 | Msa1277260:intron | 45.0% | |
| ATGGCAGCGCTAGATATTTG+GGG | - | chr8_3:12449762-12449781 | Msa1277260:intron | 45.0% | |
| CAGTGTTAAGTCACAAAGGG+AGG | - | chr8_3:12449901-12449920 | Msa1277260:intron | 45.0% | |
| AAGCTTAAAGGGATGGGTGT+AGG | + | chr8_3:12450103-12450122 | None:intergenic | 45.0% | |
| ! | CACTTGCCGCTTCAATTCTA+CGG | - | chr8_3:12450385-12450404 | Msa1277260:intron | 45.0% |
| TCACTATCTCTTTCACCGTG+TGG | - | chr8_3:12450702-12450721 | Msa1277260:intron | 45.0% | |
| AAATGAGCAGTAGGTCCTTC+AGG | + | chr8_3:12450974-12450993 | None:intergenic | 45.0% | |
| AACAACTTCACAACACGCCT+AGG | - | chr8_3:12451502-12451521 | Msa1277260:intron | 45.0% | |
| ACAACTTCACAACACGCCTA+GGG | - | chr8_3:12451503-12451522 | Msa1277260:intron | 45.0% | |
| CTTTAAACTCGGGATCTTGG+GGG | + | chr8_3:12451889-12451908 | None:intergenic | 45.0% | |
| CCTTTAAACTCGGGATCTTG+GGG | + | chr8_3:12451890-12451909 | None:intergenic | 45.0% | |
| CCCTTTAAACTCGGGATCTT+GGG | + | chr8_3:12451891-12451910 | None:intergenic | 45.0% | |
| CCCAAGATCCCGAGTTTAAA+GGG | - | chr8_3:12451888-12451907 | Msa1277260:intron | 45.0% | |
| TACACGTCGCCCTTTAAACT+CGG | + | chr8_3:12451900-12451919 | None:intergenic | 45.0% | |
| !! | CGGGCAATTGTTTTATGGTC+AGG | + | chr8_3:12452133-12452152 | None:intergenic | 45.0% |
| ATTGACACCAACCTGAAGAC+GGG | + | chr8_3:12452152-12452171 | None:intergenic | 45.0% | |
| TTGCAGGTACTCAAAACCTG+AGG | + | chr8_3:12452566-12452585 | None:intergenic | 45.0% | |
| TCTTCTGCGGCAGTATTGTT+AGG | + | chr8_3:12452731-12452750 | None:intergenic | 45.0% | |
| GACCAATCCTTCCAACATGA+CGG | + | chr8_3:12452763-12452782 | None:intergenic | 45.0% | |
| ! | GCCGCATTCCTGCATTTTTA+AGG | + | chr8_3:12453004-12453023 | None:intergenic | 45.0% |
| TGTCAAATGTTCCATGCTGC+AGG | + | chr8_3:12453053-12453072 | None:intergenic | 45.0% | |
| TGTGTCCATTTCCGGCTAAA+AGG | + | chr8_3:12453217-12453236 | None:intergenic | 45.0% | |
| ! | CTTCGACTTGTGTCCATTTC+CGG | + | chr8_3:12453225-12453244 | None:intergenic | 45.0% |
| AAATGGACACAAGTCGAAGG+AGG | - | chr8_3:12453226-12453245 | Msa1277260:CDS | 45.0% | |
| AAGTTCCAAGACAAGGTCAC+AGG | + | chr8_3:12453257-12453276 | None:intergenic | 45.0% | |
| ACTGCATTTCAGCTGGAACT+TGG | - | chr8_3:12453287-12453306 | Msa1277260:intron | 45.0% | |
| CAGCTGGAACTTGGTTAATC+TGG | - | chr8_3:12453296-12453315 | Msa1277260:intron | 45.0% | |
| !! | ATAAATAATAATTAGTTAAA+GGG | + | chr8_3:12449194-12449213 | None:intergenic | 5.0% |
| !! | AATAAATAATAATTAGTTAA+AGG | + | chr8_3:12449195-12449214 | None:intergenic | 5.0% |
| !!! | TTTTGTATTTTAATTTATTA+TGG | - | chr8_3:12453371-12453390 | Msa1277260:CDS | 5.0% |
| CGCGGTGGTTATTCCTACAA+TGG | - | chr8_3:12447527-12447546 | Msa1277260:three_prime_UTR | 50.0% | |
| ATTCCTACAATGGCGATCGG+TGG | - | chr8_3:12447537-12447556 | Msa1277260:three_prime_UTR | 50.0% | |
| TTTCCACCGATCGCCATTGT+AGG | + | chr8_3:12447543-12447562 | None:intergenic | 50.0% | |
| !!! | GAAAGGGGTTTTGGCTCGTA+TGG | - | chr8_3:12448571-12448590 | Msa1277260:intron | 50.0% |
| GATGCTAACGAGATGGTCGA+TGG | - | chr8_3:12448661-12448680 | Msa1277260:intron | 50.0% | |
| GGTCGATGGAGATGTAGTCT+TGG | - | chr8_3:12448675-12448694 | Msa1277260:intron | 50.0% | |
| ATAGCTGTTGTGTGAGCTGC+AGG | - | chr8_3:12448794-12448813 | Msa1277260:intron | 50.0% | |
| TTGTTGGTGTGGGGATCTGT+TGG | - | chr8_3:12448925-12448944 | Msa1277260:intron | 50.0% | |
| TGGGGATCTGTTGGATACAG+CGG | - | chr8_3:12448934-12448953 | Msa1277260:intron | 50.0% | |
| ! | CTGATTTGTGCGCGCATGTA+CGG | - | chr8_3:12449019-12449038 | Msa1277260:CDS | 50.0% |
| !! | CTTGCTTAAAGAGTGCCCGT+AGG | - | chr8_3:12449152-12449171 | Msa1277260:intron | 50.0% |
| CATGCTAACATGTGCCCTAC+GGG | + | chr8_3:12449170-12449189 | None:intergenic | 50.0% | |
| CTAGACTGCTCTAACAGCTG+GGG | + | chr8_3:12449354-12449373 | None:intergenic | 50.0% | |
| CGTAGAATTGAAGCGGCAAG+TGG | + | chr8_3:12450387-12450406 | None:intergenic | 50.0% | |
| !! | AGGAGTAAGAGTCGAGTTGG+AGG | - | chr8_3:12450519-12450538 | Msa1277260:intron | 50.0% |
| CCTACTTGGTTCCCTACGAT+TGG | + | chr8_3:12450841-12450860 | None:intergenic | 50.0% | |
| CCAATCGTAGGGAACCAAGT+AGG | - | chr8_3:12450838-12450857 | Msa1277260:intron | 50.0% | |
| ATCGTAGGGAACCAAGTAGG+TGG | - | chr8_3:12450841-12450860 | Msa1277260:intron | 50.0% | |
| !! | ACTCAAAGGCACCACCTACT+TGG | + | chr8_3:12450855-12450874 | None:intergenic | 50.0% |
| TGTGTCCCCTTGCAGAATCA+TGG | - | chr8_3:12451445-12451464 | Msa1277260:intron | 50.0% | |
| GGACTCCATGATTCTGCAAG+GGG | + | chr8_3:12451453-12451472 | None:intergenic | 50.0% | |
| GGGACTCCATGATTCTGCAA+GGG | + | chr8_3:12451454-12451473 | None:intergenic | 50.0% | |
| TGGGACTCCATGATTCTGCA+AGG | + | chr8_3:12451455-12451474 | None:intergenic | 50.0% | |
| TGTTCAACACAAGCTCAGGC+TGG | + | chr8_3:12451486-12451505 | None:intergenic | 50.0% | |
| CCCCAAGATCCCGAGTTTAA+AGG | - | chr8_3:12451887-12451906 | Msa1277260:intron | 50.0% | |
| GCCCTTTAAACTCGGGATCT+TGG | + | chr8_3:12451892-12451911 | None:intergenic | 50.0% | |
| ACACGTCGCCCTTTAAACTC+GGG | + | chr8_3:12451899-12451918 | None:intergenic | 50.0% | |
| GAAGTCTCTCTGGTTGTGGA+AGG | + | chr8_3:12451927-12451946 | None:intergenic | 50.0% | |
| ACAATTGCCCGTCTTCAGGT+TGG | - | chr8_3:12452142-12452161 | Msa1277260:intron | 50.0% | |
| CAGTGGTAGACTGGTAGTCT+TGG | - | chr8_3:12452528-12452547 | Msa1277260:intron | 50.0% | |
| ! | TGGTAGACTGGTAGTCTTGG+TGG | - | chr8_3:12452531-12452550 | Msa1277260:intron | 50.0% |
| ! | TTGGTGGATGCAGTATCCTC+AGG | - | chr8_3:12452547-12452566 | Msa1277260:intron | 50.0% |
| ATGACTAACAAAGGGGAGGC+TGG | + | chr8_3:12452640-12452659 | None:intergenic | 50.0% | |
| TGCATGTGAGGATTGAGGAG+GGG | + | chr8_3:12452689-12452708 | None:intergenic | 50.0% | |
| GTGCATGTGAGGATTGAGGA+GGG | + | chr8_3:12452690-12452709 | None:intergenic | 50.0% | |
| AGTGCATGTGAGGATTGAGG+AGG | + | chr8_3:12452691-12452710 | None:intergenic | 50.0% | |
| ATCCTTCCAACATGACGGCA+AGG | + | chr8_3:12452758-12452777 | None:intergenic | 50.0% | |
| TGCCGTCATGTTGGAAGGAT+TGG | - | chr8_3:12452758-12452777 | Msa1277260:intron | 50.0% | |
| CGGAAATGGACACAAGTCGA+AGG | - | chr8_3:12453223-12453242 | Msa1277260:CDS | 50.0% | |
| CTCTTCGAAAAACCCTCGCG+CGG | - | chr8_3:12447509-12447528 | Msa1277260:three_prime_UTR | 55.0% | |
| TAGGAATAACCACCGCGCGA+GGG | + | chr8_3:12447524-12447543 | None:intergenic | 55.0% | |
| CAATGGCGATCGGTGGAAAG+AGG | - | chr8_3:12447544-12447563 | Msa1277260:three_prime_UTR | 55.0% | |
| AGCTATTGAGCTCGGCGAAG+AGG | - | chr8_3:12447770-12447789 | Msa1277260:three_prime_UTR | 55.0% | |
| GTTGTAGCCTCCGGAGAAGA+AGG | - | chr8_3:12447875-12447894 | Msa1277260:exon | 55.0% | |
| GTCTTCGGCACCTTCTTCTC+CGG | + | chr8_3:12447888-12447907 | None:intergenic | 55.0% | |
| !! | TGATGCTAGGTGTCGCTCAG+AGG | - | chr8_3:12448125-12448144 | Msa1277260:intron | 55.0% |
| CTGTTGTGTGAGCTGCAGGT+CGG | - | chr8_3:12448798-12448817 | Msa1277260:intron | 55.0% | |
| ACCTTCCAACTCGATGCCCT+AGG | + | chr8_3:12451522-12451541 | None:intergenic | 55.0% | |
| ACAAAGGGGAGGCTGGAAGA+TGG | + | chr8_3:12452633-12452652 | None:intergenic | 55.0% | |
| TGCCTTGCCGTCATGTTGGA+AGG | - | chr8_3:12452753-12452772 | Msa1277260:intron | 55.0% | |
| TTCGAAAAACCCTCGCGCGG+TGG | - | chr8_3:12447512-12447531 | Msa1277260:three_prime_UTR | 60.0% | |
| GTAGGAATAACCACCGCGCG+AGG | + | chr8_3:12447525-12447544 | None:intergenic | 60.0% | |
| TTCGGCACCTTCTTCTCCGG+AGG | + | chr8_3:12447885-12447904 | None:intergenic | 60.0% | |
| !! | CTAGGTGTCGCTCAGAGGCA+CGG | - | chr8_3:12448130-12448149 | Msa1277260:intron | 60.0% |
| !! | TAGGTGTCGCTCAGAGGCAC+GGG | - | chr8_3:12448131-12448150 | Msa1277260:intron | 60.0% |
| CTTGCCTTCTGGTCTGCCTC+TGG | - | chr8_3:12448833-12448852 | Msa1277260:intron | 60.0% | |
| TGCACCAGAGGCAGACCAGA+AGG | + | chr8_3:12448840-12448859 | None:intergenic | 60.0% | |
| CAGCAGTACCACTGCACCAG+AGG | + | chr8_3:12448852-12448871 | None:intergenic | 60.0% | |
| GACTGCTCTAACAGCTGGGG+AGG | + | chr8_3:12449351-12449370 | None:intergenic | 60.0% | |
| !! | ACACGCCTAGGGCATCGAGT+TGG | - | chr8_3:12451514-12451533 | Msa1277260:intron | 60.0% |
| !! | GCCTAGGGCATCGAGTTGGA+AGG | - | chr8_3:12451518-12451537 | Msa1277260:intron | 60.0% |
| ACGGCAAGGCAGCTCTTCTG+CGG | + | chr8_3:12452744-12452763 | None:intergenic | 60.0% | |
| GAGCTGCCTTGCCGTCATGT+TGG | - | chr8_3:12452749-12452768 | Msa1277260:intron | 60.0% | |
| CTGGTCTGCCTCTGGTGCAG+TGG | - | chr8_3:12448841-12448860 | Msa1277260:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 12447479 | 12453658 | 12447479 | ID=Msa1277260;Name=Msa1277260 |
| chr8_3 | mRNA | 12447479 | 12453658 | 12447479 | ID=Msa1277260-mRNA-1;Parent=Msa1277260;Name=Msa1277260-mRNA-1;_AED=0.12;_eAED=0.12;_QI=67|1|1|1|0.9|0.90|11|398|358 |
| chr8_3 | exon | 12447479 | 12447915 | 12447479 | ID=Msa1277260-mRNA-1:exon:5047;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12448033 | 12448122 | 12448033 | ID=Msa1277260-mRNA-1:exon:5046;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12448978 | 12449086 | 12448978 | ID=Msa1277260-mRNA-1:exon:5045;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12449171 | 12449269 | 12449171 | ID=Msa1277260-mRNA-1:exon:5044;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12449598 | 12449677 | 12449598 | ID=Msa1277260-mRNA-1:exon:5043;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12450107 | 12450189 | 12450107 | ID=Msa1277260-mRNA-1:exon:5042;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12450282 | 12450351 | 12450282 | ID=Msa1277260-mRNA-1:exon:5041;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12450448 | 12450531 | 12450448 | ID=Msa1277260-mRNA-1:exon:5040;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12450731 | 12450826 | 12450731 | ID=Msa1277260-mRNA-1:exon:5039;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12453175 | 12453255 | 12453175 | ID=Msa1277260-mRNA-1:exon:5038;Parent=Msa1277260-mRNA-1 |
| chr8_3 | exon | 12453346 | 12453658 | 12453346 | ID=Msa1277260-mRNA-1:exon:5037;Parent=Msa1277260-mRNA-1 |
| chr8_3 | five_prime_UTR | 12453592 | 12453658 | 12453592 | ID=Msa1277260-mRNA-1:five_prime_utr;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12453346 | 12453591 | 12453346 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12453175 | 12453255 | 12453175 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12450731 | 12450826 | 12450731 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12450448 | 12450531 | 12450448 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12450282 | 12450351 | 12450282 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12450107 | 12450189 | 12450107 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12449598 | 12449677 | 12449598 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12449171 | 12449269 | 12449171 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12448978 | 12449086 | 12448978 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12448033 | 12448122 | 12448033 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | CDS | 12447877 | 12447915 | 12447877 | ID=Msa1277260-mRNA-1:cds;Parent=Msa1277260-mRNA-1 |
| chr8_3 | three_prime_UTR | 12447479 | 12447876 | 12447479 | ID=Msa1277260-mRNA-1:three_prime_utr;Parent=Msa1277260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
