AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1227700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1227700 MtrunA17_Chr8g0334451 99.638 276 1 0 1 276 1 276 0.0 560
Msa1227700 MtrunA17_Chr7g0245301 84.698 281 32 3 5 276 3 281 1.15e-171 475
Msa1227700 MtrunA17_Chr5g0432901 67.845 283 72 6 5 274 3 279 1.30e-128 366
Msa1227700 MtrunA17_Chr3g0108401 70.115 261 69 3 22 274 1 260 2.54e-127 362
Msa1227700 MtrunA17_Chr3g0080071 57.576 264 97 7 24 274 30 291 5.42e-93 276
Msa1227700 MtrunA17_Chr2g0276961 52.874 261 107 5 32 276 52 312 7.40e-80 243
Msa1227700 MtrunA17_Chr4g0018581 47.154 123 59 3 131 253 217 333 1.57e-26 108
Msa1227700 MtrunA17_Chr7g0267531 38.889 90 39 3 85 168 2 81 2.82e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1227700 AT2G38610.2 80.986 284 40 5 5 275 3 285 2.28e-160 447
Msa1227700 AT2G38610.1 80.986 284 40 5 5 275 3 285 2.28e-160 447
Msa1227700 AT3G08620.1 75.801 281 59 1 5 276 3 283 1.32e-153 430
Msa1227700 AT3G08620.2 76.471 238 47 1 48 276 1 238 5.55e-131 371
Msa1227700 AT4G26480.3 54.545 275 108 3 8 274 41 306 2.38e-97 288
Msa1227700 AT4G26480.1 54.545 275 108 3 8 274 41 306 2.38e-97 288
Msa1227700 AT5G56140.1 55.957 277 103 6 8 274 45 312 2.86e-97 288
Msa1227700 AT1G09660.1 52.536 276 103 6 18 274 30 296 1.22e-87 263
Msa1227700 AT1G09660.3 52.536 276 103 6 18 274 30 296 1.22e-87 263
Msa1227700 AT4G26480.2 56.889 225 85 2 58 274 1 221 1.54e-84 253
Msa1227700 AT1G09660.2 50.220 227 94 4 18 231 30 250 1.89e-69 216
Msa1227700 AT5G51300.1 44.800 125 59 3 131 253 244 360 9.09e-25 103
Msa1227700 AT5G51300.2 44.800 125 59 3 131 253 244 360 9.09e-25 103
Msa1227700 AT5G51300.3 44.800 125 59 3 131 253 244 360 9.09e-25 103

Find 115 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGAAATATTAAGAGTTTC+TGG 0.168767 8_2:+3040991 Msa1227700:intron
CTTCAATGCATTATACCTTT+TGG 0.270525 8_2:-3044225 None:intergenic
TCAGTATCTGTCGGAGTTAC+TGG 0.279180 8_2:+3040802 Msa1227700:CDS
ATTATTGCTGGCTAGCATTC+TGG 0.289681 8_2:+3043907 Msa1227700:three_prime_UTR
AAGATTTACATTACCTTGTC+TGG 0.294455 8_2:-3042787 None:intergenic
TTCATTCCACTAGAATTAAA+TGG 0.295208 8_2:-3043758 None:intergenic
CTAGCTCATACACTGTTAAA+AGG 0.340370 8_2:+3042478 Msa1227700:CDS
ACATAGGACTAGGGCTTCTA+TGG 0.342273 8_2:-3041056 None:intergenic
CTGTCGATGATATCTGAATT+AGG 0.343691 8_2:-3040706 None:intergenic
AAGGCAGCAGTTGCGGGAAT+TGG 0.349647 8_2:+3043679 Msa1227700:CDS
TGCCAATCCATTGTCATTCC+AGG 0.353094 8_2:-3042438 None:intergenic
TTTGTCTGGCAACCCATTGC+TGG 0.355563 8_2:+3043831 Msa1227700:three_prime_UTR
CGTTACATGCCCACAAAACT+TGG 0.365724 8_2:-3044146 None:intergenic
CATCAAAAGGCAGCAGTTGC+GGG 0.365876 8_2:+3043673 Msa1227700:CDS
GTGTATGAGCTAGGACTTGC+AGG 0.375348 8_2:-3042468 None:intergenic
ATCTTAGATTGGTATTTGTC+TGG 0.376768 8_2:+3043817 Msa1227700:three_prime_UTR
CTAGCTAGCTAGCAGCAGTT+AGG 0.384122 8_2:+3040557 Msa1227700:five_prime_UTR
TATTAAGAATAGGCTTGTTC+AGG 0.389072 8_2:+3044011 Msa1227700:three_prime_UTR
GGTTGCAGGGTGTTCATTAG+AGG 0.391007 8_2:+3042745 Msa1227700:CDS
CTAACTGCTGCTAGCTAGCT+AGG 0.395260 8_2:-3040556 None:intergenic
AAAGTCAGCAAAACCTTGAT+TGG 0.400137 8_2:-3041022 None:intergenic
AAATGATAAAATAATTATGT+TGG 0.403419 8_2:+3043987 Msa1227700:three_prime_UTR
ATTGTTGGTAGTAAAGTATA+TGG 0.411984 8_2:+3040488 Msa1227700:five_prime_UTR
TAGAGGAAAGGGGTCAATAA+AGG 0.414307 8_2:+3042762 Msa1227700:CDS
TAGCTAGCTAGCAGCAGTTA+GGG 0.418562 8_2:+3040558 Msa1227700:five_prime_UTR
TTATGTTGGGTATTAAGAAT+AGG 0.419104 8_2:+3044001 Msa1227700:three_prime_UTR
TAGAGGAAATTCTTTGAAAC+GGG 0.419651 8_2:+3042708 Msa1227700:CDS
AAGGTATAATGCATTGAAGT+TGG 0.420274 8_2:+3044229 Msa1227700:three_prime_UTR
GAGAAATTGAGAGGAAGGCC+AGG 0.421826 8_2:+3042933 Msa1227700:CDS
TAGAAGCTACTACAGGTTGC+AGG 0.428180 8_2:+3042731 Msa1227700:CDS
GCGTCCTTGTTATCTTAGAT+TGG 0.428630 8_2:+3043806 Msa1227700:three_prime_UTR
AACAACATTAGCAGGTAAAT+CGG 0.430932 8_2:-3042997 None:intergenic
AGTGTGGAATATACAAATGA+TGG 0.431956 8_2:+3044100 Msa1227700:three_prime_UTR
ATTCAAGAGACGACTGGAGT+TGG 0.441155 8_2:-3040864 None:intergenic
CTAGAGGAAATTCTTTGAAA+CGG 0.441382 8_2:+3042707 Msa1227700:CDS
AATAGACTGACAATTATTGC+TGG 0.442103 8_2:+3043895 Msa1227700:three_prime_UTR
ATTACTGATCGATTGATTGT+TGG 0.445987 8_2:+3040473 Msa1227700:five_prime_UTR
AATCAATCAATCATCATGTC+AGG 0.454921 8_2:+3040622 Msa1227700:exon
TTCAAGAGACGACTGGAGTT+GGG 0.455513 8_2:-3040863 None:intergenic
TCTGGAATGTTATCCAATCA+AGG 0.455692 8_2:+3041009 Msa1227700:CDS
TGTATTAAGTTAAAATGAAA+AGG 0.464748 8_2:-3044039 None:intergenic
CTGGCAGAGTATCAGAAACT+TGG 0.466295 8_2:+3040821 Msa1227700:CDS
CAGAGATTATGTGGAACTCC+TGG 0.480586 8_2:+3042420 Msa1227700:intron
AATGATAAAATAATTATGTT+GGG 0.480870 8_2:+3043988 Msa1227700:three_prime_UTR
AGGGTGTTCATTAGAGGAAA+GGG 0.481670 8_2:+3042751 Msa1227700:CDS
TCATCAAAAGGCAGCAGTTG+CGG 0.493688 8_2:+3043672 Msa1227700:CDS
CATGAGGCTCAGGCAGGCTC+AGG 0.496803 8_2:+3043022 Msa1227700:CDS
AGGAAGAGAAATTGAGAGGA+AGG 0.498722 8_2:+3042928 Msa1227700:intron
AGTCAGAAGATTTCATCAAA+AGG 0.500025 8_2:+3043660 Msa1227700:CDS
GTATCTCCATTTAATTCTAG+TGG 0.500971 8_2:+3043752 Msa1227700:CDS
TGCAAGATATTCCCAGCAAT+GGG 0.502926 8_2:-3043843 None:intergenic
TCCAGTCGTCTCTTGAATCA+AGG 0.503507 8_2:+3040869 Msa1227700:CDS
CATTTGTAATTCCTTCCAAA+AGG 0.505873 8_2:+3044210 Msa1227700:three_prime_UTR
TGAGGTGAAGCAGCTCTCAC+AGG 0.506055 8_2:-3040676 None:intergenic
TTGTCTGGCAACCCATTGCT+GGG 0.511623 8_2:+3043832 Msa1227700:three_prime_UTR
CACCCGATCGAGTTCACAAA+AGG 0.512463 8_2:-3040590 None:intergenic
CGTTTCAAAGAATTTCCTCT+AGG 0.514490 8_2:-3042706 None:intergenic
CTCATGTCAACAACATTAGC+AGG 0.516459 8_2:-3043005 None:intergenic
TGTAACGTGCCAAGTCTCAC+TGG 0.516863 8_2:+3044162 Msa1227700:three_prime_UTR
CTGCAAGATATTCCCAGCAA+TGG 0.517768 8_2:-3043844 None:intergenic
TTTGAGGAAGACATAGGACT+AGG 0.524772 8_2:-3041066 None:intergenic
ATGTCTTCCTCAAACCTCAC+TGG 0.528865 8_2:+3041075 Msa1227700:CDS
GATACACTACCGCTTGGTCC+AGG 0.531690 8_2:-3043734 None:intergenic
AATTTGAGAGAAGAGAGTCC+TGG 0.532553 8_2:+3043716 Msa1227700:CDS
CAGGGTGTTCATTAGAGGAA+AGG 0.533462 8_2:+3042750 Msa1227700:CDS
ACCTTGATTCAAGAGACGAC+TGG 0.540514 8_2:-3040870 None:intergenic
CTCACAGGGGAAGAGAAGTT+CGG 0.542933 8_2:-3040661 None:intergenic
ATTCCATCCAGTGAGGTTTG+AGG 0.543328 8_2:-3041082 None:intergenic
ATGTTGTTGACATGAGGCTC+AGG 0.547815 8_2:+3043012 Msa1227700:CDS
CTTCCTCAAACCTCACTGGA+TGG 0.549823 8_2:+3041079 Msa1227700:CDS
CTCCTGGAATGACAATGGAT+TGG 0.551744 8_2:+3042436 Msa1227700:CDS
CTTTAGGAAGAGAAATTGAG+AGG 0.552994 8_2:+3042924 Msa1227700:intron
TCAATCATCATGTCAGGAGG+AGG 0.557397 8_2:+3040628 Msa1227700:exon
TCATTGAGATGCTCATACCC+TGG 0.561509 8_2:-3042951 None:intergenic
TGTTGACATGAGGCTCAGGC+AGG 0.566625 8_2:+3043016 Msa1227700:CDS
ATTGCTGGCTAGCATTCTGG+TGG 0.568630 8_2:+3043910 Msa1227700:three_prime_UTR
GAGGTGAAGCAGCTCTCACA+GGG 0.572330 8_2:-3040675 None:intergenic
ACCATTGTTATCCAGAATGT+AGG 0.575638 8_2:-3043951 None:intergenic
CAATAACTTGCGTAGAAGTG+TGG 0.575641 8_2:+3044084 Msa1227700:three_prime_UTR
CTAATTCAGATATCATCGAC+AGG 0.576685 8_2:+3040707 Msa1227700:CDS
TCCAGAATGTAGGATAAAAG+AGG 0.576719 8_2:-3043941 None:intergenic
AATCGGCTTCAATCAATATG+TGG 0.580900 8_2:-3042980 None:intergenic
GTGTGGAATATACAAATGAT+GGG 0.585785 8_2:+3044101 Msa1227700:three_prime_UTR
ACATTAGGGTATGTATCCAC+TGG 0.586251 8_2:-3042519 None:intergenic
CTAGCTAGCAGCAGTTAGGG+AGG 0.589301 8_2:+3040561 Msa1227700:five_prime_UTR
TTTGCGCTTGGAAATTCCAG+TGG 0.591711 8_2:+3042503 Msa1227700:CDS
AAAAGTCCTCTCATGTATGT+GGG 0.596328 8_2:+3044272 Msa1227700:three_prime_UTR
TTGAGGAAGACATAGGACTA+GGG 0.597915 8_2:-3041065 None:intergenic
AGAGACGACTGGAGTTGGGA+AGG 0.600245 8_2:-3040859 None:intergenic
AATGGAGATACACTACCGCT+TGG 0.602927 8_2:-3043740 None:intergenic
AAACGGGTAGAAGCTACTAC+AGG 0.604629 8_2:+3042724 Msa1227700:CDS
CTGCTAATGTTGTTGACATG+AGG 0.608129 8_2:+3043006 Msa1227700:CDS
TACATTCTGGATAACAATGG+TGG 0.609153 8_2:+3043953 Msa1227700:three_prime_UTR
AGAAATTGAGAGGAAGGCCA+GGG 0.611308 8_2:+3042934 Msa1227700:CDS
GCATTGAAGTTGGAATATGA+AGG 0.614137 8_2:+3044239 Msa1227700:three_prime_UTR
GTGAGGTTTGAGGAAGACAT+AGG 0.616403 8_2:-3041072 None:intergenic
GGAAGACTTCTGGGACCTAG+AGG 0.616576 8_2:+3042691 Msa1227700:CDS
GTCAATAAAGGATCCAGACA+AGG 0.622267 8_2:+3042774 Msa1227700:CDS
AGAAGCTACTACAGGTTGCA+GGG 0.622380 8_2:+3042732 Msa1227700:CDS
GCATCACAGTCAGTATCTGT+CGG 0.627770 8_2:+3040793 Msa1227700:intron
TGGAACTCCTGGAATGACAA+TGG 0.632407 8_2:+3042431 Msa1227700:CDS
TCCTACATTCTGGATAACAA+TGG 0.634851 8_2:+3043950 Msa1227700:three_prime_UTR
CAATCATCATGTCAGGAGGA+GGG 0.636739 8_2:+3040629 Msa1227700:exon
CAATCAATCATCATGTCAGG+AGG 0.650767 8_2:+3040625 Msa1227700:exon
GAAGAGAGTCCTGGACCAAG+CGG 0.652639 8_2:+3043725 Msa1227700:CDS
GCTTCAATCAATATGTGGAG+TGG 0.654500 8_2:-3042975 None:intergenic
GGGTGTTCATTAGAGGAAAG+GGG 0.662017 8_2:+3042752 Msa1227700:CDS
GGAATGACAATGGATTGGCA+AGG 0.664517 8_2:+3042441 Msa1227700:CDS
AATACCAATCTAAGATAACA+AGG 0.668830 8_2:-3043810 None:intergenic
CAAATGCCCACATACATGAG+AGG 0.671727 8_2:-3044278 None:intergenic
GAAGATTATTCCATCCAGTG+AGG 0.674240 8_2:-3041089 None:intergenic
AGAAGAATTACTGAAACCTG+TGG 0.674991 8_2:+3043052 Msa1227700:CDS
TCTGAATTAGGTCTAATCTG+AGG 0.688043 8_2:-3040694 None:intergenic
ATGGAATAATCTTCAACACG+AGG 0.724420 8_2:+3041098 Msa1227700:CDS
AGGTGAAGCAGCTCTCACAG+GGG 0.794731 8_2:-3040674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAAAAATTAATAATCT+TGG + chr8_2:3042039-3042058 Msa1227700:intron 10.0%
!! ATGTAAAAATTAATAATCTT+GGG + chr8_2:3042040-3042059 Msa1227700:intron 10.0%
!! AAATGATAAAATAATTATGT+TGG + chr8_2:3043987-3044006 Msa1227700:three_prime_UTR 10.0%
!! AATGATAAAATAATTATGTT+GGG + chr8_2:3043988-3044007 Msa1227700:three_prime_UTR 10.0%
!!! ATGTTTTTAATATACTTTAG+GGG - chr8_2:3041310-3041329 None:intergenic 15.0%
!!! GATGTTTTTAATATACTTTA+GGG - chr8_2:3041311-3041330 None:intergenic 15.0%
!!! AGATGTTTTTAATATACTTT+AGG - chr8_2:3041312-3041331 None:intergenic 15.0%
!!! ACTAATTTTGATTTACTTTA+GGG + chr8_2:3041447-3041466 Msa1227700:intron 15.0%
!! ATATTATTGAAACCTATTTA+AGG - chr8_2:3041671-3041690 None:intergenic 15.0%
!! AAATGTTAAAATTTCAAAAG+TGG + chr8_2:3042072-3042091 Msa1227700:intron 15.0%
!! ATATTTAGATTAATTCTAGT+TGG - chr8_2:3042639-3042658 None:intergenic 15.0%
!!! TTGTTTCTTTAAATTTGATA+AGG - chr8_2:3043216-3043235 None:intergenic 15.0%
!! AATATTGTCAAACAATTAAT+AGG - chr8_2:3043341-3043360 None:intergenic 15.0%
!! TGTATTAAGTTAAAATGAAA+AGG - chr8_2:3044042-3044061 None:intergenic 15.0%
!! ATTCATTCATTCATTGTTTA+TGG + chr8_2:3040771-3040790 Msa1227700:intron 20.0%
!!! GTAAGAATTTTCATATACTT+TGG + chr8_2:3041395-3041414 Msa1227700:intron 20.0%
!!! GACTAATTTTGATTTACTTT+AGG + chr8_2:3041446-3041465 Msa1227700:intron 20.0%
!!! CTAATTTTGATTTACTTTAG+GGG + chr8_2:3041448-3041467 Msa1227700:intron 20.0%
!! GAAAGAAAATAGATAAAAGT+TGG - chr8_2:3041774-3041793 None:intergenic 20.0%
!! AAGAAAATAGAAATTGCTAA+CGG + chr8_2:3042105-3042124 Msa1227700:intron 20.0%
!!! TTTAGTTTCAAGAAAGATAA+AGG - chr8_2:3042609-3042628 None:intergenic 20.0%
!! TTTATCTTTCTTGAAACTAA+AGG + chr8_2:3042608-3042627 Msa1227700:intron 20.0%
!! TCATCAAAATGATTACTATT+TGG - chr8_2:3043571-3043590 None:intergenic 20.0%
!!! TTTTAACTTAATACAGCTAT+TGG + chr8_2:3044047-3044066 Msa1227700:three_prime_UTR 20.0%
!!! ATTGTTGGTAGTAAAGTATA+TGG + chr8_2:3040488-3040507 Msa1227700:five_prime_UTR 25.0%
! TAGTGATAAACTGCATAAAA+TGG - chr8_2:3041171-3041190 None:intergenic 25.0%
!!! ATCTTTTTAGTTTACTACCA+TGG - chr8_2:3041545-3041564 None:intergenic 25.0%
! ACTAAAAAGATCCCTTAAAT+AGG + chr8_2:3041554-3041573 Msa1227700:intron 25.0%
! TCAACTTAAGACCTATTTAA+GGG - chr8_2:3041568-3041587 None:intergenic 25.0%
!!! TCATTTTAGTTTACTACCAT+TGG - chr8_2:3041646-3041665 None:intergenic 25.0%
! ACTAAAATGACTCCTTAAAT+AGG + chr8_2:3041656-3041675 Msa1227700:intron 25.0%
!!! TTTCTTTCTTATTTTGATCG+TGG + chr8_2:3041786-3041805 Msa1227700:intron 25.0%
!!! TTCTTTCTTATTTTGATCGT+GGG + chr8_2:3041787-3041806 Msa1227700:intron 25.0%
! AAAATGGATGCAACTATATA+AGG - chr8_2:3041840-3041859 None:intergenic 25.0%
! AGATAGTATGTTTGTATGTA+TGG + chr8_2:3041934-3041953 Msa1227700:intron 25.0%
! AGAAAATAGAAATTGCTAAC+GGG + chr8_2:3042106-3042125 Msa1227700:intron 25.0%
! TGACATATGAACTTACATTA+GGG - chr8_2:3042536-3042555 None:intergenic 25.0%
! TTGACATATGAACTTACATT+AGG - chr8_2:3042537-3042556 None:intergenic 25.0%
!!! ATGTCAATTCTAGTTCAATA+AGG + chr8_2:3042550-3042569 Msa1227700:intron 25.0%
!!! TGTCAATTCTAGTTCAATAA+GGG + chr8_2:3042551-3042570 Msa1227700:intron 25.0%
!! TTGCATTAGTTCAATTTTGT+TGG + chr8_2:3042670-3042689 Msa1227700:intron 25.0%
! TTGTTGTCCTTTAAATCTTT+AGG + chr8_2:3042908-3042927 Msa1227700:intron 25.0%
! TTCTCTTCCTAAAGATTTAA+AGG - chr8_2:3042918-3042937 None:intergenic 25.0%
!!! TGCTTCATTTTGTTTAAGAA+TGG + chr8_2:3043140-3043159 Msa1227700:intron 25.0%
! AAGAAACAACTTTCTTACAA+TGG + chr8_2:3043227-3043246 Msa1227700:intron 25.0%
!!! TTCGAAGTTTGTTAGTTATA+TGG + chr8_2:3043251-3043270 Msa1227700:intron 25.0%
! TCATTTGTTTAATTGAAGTC+AGG + chr8_2:3043286-3043305 Msa1227700:intron 25.0%
! AAATTTCACAAACAAGGAAA+AGG - chr8_2:3043391-3043410 None:intergenic 25.0%
! TAACAGAAATTTCACAAACA+AGG - chr8_2:3043397-3043416 None:intergenic 25.0%
! TCTTGATTTAAACGATAACA+TGG - chr8_2:3043536-3043555 None:intergenic 25.0%
! TCTTGTATATTCACTTTGTT+TGG + chr8_2:3043611-3043630 Msa1227700:intron 25.0%
!! CTTGTATATTCACTTTGTTT+GGG + chr8_2:3043612-3043631 Msa1227700:intron 25.0%
! TTCATTCCACTAGAATTAAA+TGG - chr8_2:3043761-3043780 None:intergenic 25.0%
!! AATACCAATCTAAGATAACA+AGG - chr8_2:3043813-3043832 None:intergenic 25.0%
! TTATGTTGGGTATTAAGAAT+AGG + chr8_2:3044001-3044020 Msa1227700:three_prime_UTR 25.0%
ATTACTGATCGATTGATTGT+TGG + chr8_2:3040473-3040492 Msa1227700:five_prime_UTR 30.0%
AATCAATCAATCATCATGTC+AGG + chr8_2:3040622-3040641 Msa1227700:exon 30.0%
ATGAATGAATGAATCAAGCA+AGG - chr8_2:3040765-3040784 None:intergenic 30.0%
GCAGAAATATTAAGAGTTTC+TGG + chr8_2:3040991-3041010 Msa1227700:intron 30.0%
! ATATACTTTAGGGGCTAAAT+TGG - chr8_2:3041301-3041320 None:intergenic 30.0%
!!! ACCTTGCTGTTAAGATTTTA+GGG + chr8_2:3041364-3041383 Msa1227700:intron 30.0%
! ATACTTTGGATCTAAGATGA+TGG + chr8_2:3041409-3041428 Msa1227700:intron 30.0%
!! GATGATGGATTTCATATACT+TGG + chr8_2:3041424-3041443 Msa1227700:intron 30.0%
!!! TTTTTAGTTTACTACCATGG+TGG - chr8_2:3041542-3041561 None:intergenic 30.0%
GTCAACTTAAGACCTATTTA+AGG - chr8_2:3041569-3041588 None:intergenic 30.0%
! ATCACATGAATTTGAGATGA+TGG + chr8_2:3041746-3041765 Msa1227700:intron 30.0%
! TCACATGAATTTGAGATGAT+GGG + chr8_2:3041747-3041766 Msa1227700:intron 30.0%
AAATAACACTACGCAAAGAA+AGG + chr8_2:3042001-3042020 Msa1227700:intron 30.0%
! TATGGAACAAAGTTTTCTGA+CGG - chr8_2:3042219-3042238 None:intergenic 30.0%
GTGAATAGATCACTATACTA+TGG - chr8_2:3042237-3042256 None:intergenic 30.0%
AGAAAAGAACTTCTCAAACT+AGG - chr8_2:3042295-3042314 None:intergenic 30.0%
! TATTTTGCACAGAGATTATG+TGG + chr8_2:3042411-3042430 Msa1227700:intron 30.0%
! AATTTTGTTGGAAGACTTCT+GGG + chr8_2:3042682-3042701 Msa1227700:CDS 30.0%
! CTAGAGGAAATTCTTTGAAA+CGG + chr8_2:3042707-3042726 Msa1227700:CDS 30.0%
!! TAGAGGAAATTCTTTGAAAC+GGG + chr8_2:3042708-3042727 Msa1227700:CDS 30.0%
AAGATTTACATTACCTTGTC+TGG - chr8_2:3042790-3042809 None:intergenic 30.0%
! ACATTTTGCAGTACTAAATC+GGG - chr8_2:3042824-3042843 None:intergenic 30.0%
! CACATTTTGCAGTACTAAAT+CGG - chr8_2:3042825-3042844 None:intergenic 30.0%
AACAACATTAGCAGGTAAAT+CGG - chr8_2:3043000-3043019 None:intergenic 30.0%
TCTAAATGTCTACACATTCA+TGG - chr8_2:3043181-3043200 None:intergenic 30.0%
GAATTTGATGTGGTAGATTA+AGG - chr8_2:3043426-3043445 None:intergenic 30.0%
TATTTACCTCGAATTTGATG+TGG - chr8_2:3043436-3043455 None:intergenic 30.0%
CATGTATAACAATATCTTCC+CGG + chr8_2:3043504-3043523 Msa1227700:intron 30.0%
AGTCAGAAGATTTCATCAAA+AGG + chr8_2:3043660-3043679 Msa1227700:CDS 30.0%
GTATCTCCATTTAATTCTAG+TGG + chr8_2:3043752-3043771 Msa1227700:CDS 30.0%
ATCTTAGATTGGTATTTGTC+TGG + chr8_2:3043817-3043836 Msa1227700:three_prime_UTR 30.0%
AATAGACTGACAATTATTGC+TGG + chr8_2:3043895-3043914 Msa1227700:three_prime_UTR 30.0%
! TATTAAGAATAGGCTTGTTC+AGG + chr8_2:3044011-3044030 Msa1227700:three_prime_UTR 30.0%
AGTGTGGAATATACAAATGA+TGG + chr8_2:3044100-3044119 Msa1227700:three_prime_UTR 30.0%
GTGTGGAATATACAAATGAT+GGG + chr8_2:3044101-3044120 Msa1227700:three_prime_UTR 30.0%
!!! CAAATGATGGGTTAAGTTTT+CGG + chr8_2:3044113-3044132 Msa1227700:three_prime_UTR 30.0%
CATTTGTAATTCCTTCCAAA+AGG + chr8_2:3044210-3044229 Msa1227700:three_prime_UTR 30.0%
! AATGCATTATACCTTTTGGA+AGG - chr8_2:3044224-3044243 None:intergenic 30.0%
! CTTCAATGCATTATACCTTT+TGG - chr8_2:3044228-3044247 None:intergenic 30.0%
AAGGTATAATGCATTGAAGT+TGG + chr8_2:3044229-3044248 Msa1227700:three_prime_UTR 30.0%
TCTGAATTAGGTCTAATCTG+AGG - chr8_2:3040697-3040716 None:intergenic 35.0%
CTGTCGATGATATCTGAATT+AGG - chr8_2:3040709-3040728 None:intergenic 35.0%
CTAATTCAGATATCATCGAC+AGG + chr8_2:3040707-3040726 Msa1227700:CDS 35.0%
!! TTGGGAAGGATTTTGATGAA+TGG - chr8_2:3040848-3040867 None:intergenic 35.0%
! TCTGGAATGTTATCCAATCA+AGG + chr8_2:3041009-3041028 Msa1227700:CDS 35.0%
AAAGTCAGCAAAACCTTGAT+TGG - chr8_2:3041025-3041044 None:intergenic 35.0%
ATGGAATAATCTTCAACACG+AGG + chr8_2:3041098-3041117 Msa1227700:CDS 35.0%
! GGATTGTTAGTCTAATACTC+TGG + chr8_2:3041231-3041250 Msa1227700:intron 35.0%
!!! GACCTTGCTGTTAAGATTTT+AGG + chr8_2:3041363-3041382 Msa1227700:intron 35.0%
TCCCTAAAATCTTAACAGCA+AGG - chr8_2:3041368-3041387 None:intergenic 35.0%
!! TTAAGATTTTAGGGACTGAG+AGG + chr8_2:3041373-3041392 Msa1227700:intron 35.0%
TAAGAACTCAATGACTCCAA+TGG + chr8_2:3041627-3041646 Msa1227700:intron 35.0%
!!! CATCCATTTTTTTCCTCCAA+TGG + chr8_2:3041850-3041869 Msa1227700:intron 35.0%
ATAAGGACCTCAACATGTTA+AGG - chr8_2:3041880-3041899 None:intergenic 35.0%
AACATGTTGAGGTCCTTATT+AGG + chr8_2:3041881-3041900 Msa1227700:intron 35.0%
TTGAGGTCCTTATTAGGTAA+AGG + chr8_2:3041887-3041906 Msa1227700:intron 35.0%
! CTGAATCATGAACATTTTCC+TGG - chr8_2:3041960-3041979 None:intergenic 35.0%
AATAGAAATTGCTAACGGGA+TGG + chr8_2:3042110-3042129 Msa1227700:intron 35.0%
! AAAGTTTTCTGACGGTCATA+TGG - chr8_2:3042211-3042230 None:intergenic 35.0%
GTTTGATACGAAGTAGAGTA+AGG - chr8_2:3042259-3042278 None:intergenic 35.0%
CTTCGTATCAAACTTCTTAG+TGG + chr8_2:3042266-3042285 Msa1227700:intron 35.0%
! CTTTTAACAGTGTATGAGCT+AGG - chr8_2:3042480-3042499 None:intergenic 35.0%
CTAGCTCATACACTGTTAAA+AGG + chr8_2:3042478-3042497 Msa1227700:CDS 35.0%
! TGTTAAAAGGATTTTGCGCT+TGG + chr8_2:3042491-3042510 Msa1227700:CDS 35.0%
AAGAAAGATAAAGGACAGTG+TGG - chr8_2:3042600-3042619 None:intergenic 35.0%
! CAATTTTGTTGGAAGACTTC+TGG + chr8_2:3042681-3042700 Msa1227700:CDS 35.0%
CGTTTCAAAGAATTTCCTCT+AGG - chr8_2:3042709-3042728 None:intergenic 35.0%
! CTTTAGGAAGAGAAATTGAG+AGG + chr8_2:3042924-3042943 Msa1227700:intron 35.0%
! AATCGGCTTCAATCAATATG+TGG - chr8_2:3042983-3043002 None:intergenic 35.0%
AGAAGAATTACTGAAACCTG+TGG + chr8_2:3043052-3043071 Msa1227700:CDS 35.0%
AAGATCAATACACGAAGTGA+AGG - chr8_2:3043084-3043103 None:intergenic 35.0%
! ATTGATCTTTTCTCCGTGTT+AGG + chr8_2:3043095-3043114 Msa1227700:intron 35.0%
TAGGCACTTCTAATATAGCT+GGG - chr8_2:3043322-3043341 None:intergenic 35.0%
ATAGGCACTTCTAATATAGC+TGG - chr8_2:3043323-3043342 None:intergenic 35.0%
AATCTACCACATCAAATTCG+AGG + chr8_2:3043427-3043446 Msa1227700:intron 35.0%
TGATTACTATTTGGAAGTCG+TGG - chr8_2:3043562-3043581 None:intergenic 35.0%
GATGTCAATTTCTGATATGC+AGG + chr8_2:3043634-3043653 Msa1227700:intron 35.0%
AGCAAAAACTGGTAGATGAA+AGG + chr8_2:3043784-3043803 Msa1227700:exon 35.0%
! TCCTCTTTTATCCTACATTC+TGG + chr8_2:3043940-3043959 Msa1227700:three_prime_UTR 35.0%
TCCAGAATGTAGGATAAAAG+AGG - chr8_2:3043944-3043963 None:intergenic 35.0%
TCCTACATTCTGGATAACAA+TGG + chr8_2:3043950-3043969 Msa1227700:three_prime_UTR 35.0%
ACCATTGTTATCCAGAATGT+AGG - chr8_2:3043954-3043973 None:intergenic 35.0%
TACATTCTGGATAACAATGG+TGG + chr8_2:3043953-3043972 Msa1227700:three_prime_UTR 35.0%
! TCTAAATCGACCAAGTTTTG+TGG + chr8_2:3044136-3044155 Msa1227700:three_prime_UTR 35.0%
!! CTAAATCGACCAAGTTTTGT+GGG + chr8_2:3044137-3044156 Msa1227700:three_prime_UTR 35.0%
AAAAAGAATCCAGTGAGACT+TGG - chr8_2:3044174-3044193 None:intergenic 35.0%
GCATTGAAGTTGGAATATGA+AGG + chr8_2:3044239-3044258 Msa1227700:three_prime_UTR 35.0%
AAAAAGTCCTCTCATGTATG+TGG + chr8_2:3044271-3044290 Msa1227700:three_prime_UTR 35.0%
AAAAGTCCTCTCATGTATGT+GGG + chr8_2:3044272-3044291 Msa1227700:three_prime_UTR 35.0%
! ACTCCTTTTGTGAACTCGAT+CGG + chr8_2:3040587-3040606 Msa1227700:five_prime_UTR 40.0%
CAATCAATCATCATGTCAGG+AGG + chr8_2:3040625-3040644 Msa1227700:exon 40.0%
TTGAGGAAGACATAGGACTA+GGG - chr8_2:3041068-3041087 None:intergenic 40.0%
TTTGAGGAAGACATAGGACT+AGG - chr8_2:3041069-3041088 None:intergenic 40.0%
GAAGATTATTCCATCCAGTG+AGG - chr8_2:3041092-3041111 None:intergenic 40.0%
TCTATACTTCGACATTGCTC+TGG + chr8_2:3041210-3041229 Msa1227700:intron 40.0%
TTGGAGAGATCGATACTTGT+GGG - chr8_2:3041282-3041301 None:intergenic 40.0%
ATTGGAGAGATCGATACTTG+TGG - chr8_2:3041283-3041302 None:intergenic 40.0%
AACAGCAAGGTCTAAACTGA+CGG - chr8_2:3041355-3041374 None:intergenic 40.0%
TCAACTCATAACATCCACCA+TGG + chr8_2:3041525-3041544 Msa1227700:intron 40.0%
CCTCCATTGGAGGAAAAAAA+TGG - chr8_2:3041856-3041875 None:intergenic 40.0%
!!! CCATTTTTTTCCTCCAATGG+AGG + chr8_2:3041853-3041872 Msa1227700:intron 40.0%
AACATGTTAAGGACCTCCAT+TGG - chr8_2:3041869-3041888 None:intergenic 40.0%
! TCTACTAGAGCATCTCCAAT+GGG - chr8_2:3041917-3041936 None:intergenic 40.0%
! ATCTACTAGAGCATCTCCAA+TGG - chr8_2:3041918-3041937 None:intergenic 40.0%
GTATGTTTGTATGTATGGCC+AGG + chr8_2:3041939-3041958 Msa1227700:intron 40.0%
AGTACTGTGAATGCAAAGAC+TGG + chr8_2:3042140-3042159 Msa1227700:intron 40.0%
GTACTGTGAATGCAAAGACT+GGG + chr8_2:3042141-3042160 Msa1227700:intron 40.0%
ACATTAGGGTATGTATCCAC+TGG - chr8_2:3042522-3042541 None:intergenic 40.0%
! AGGGTGTTCATTAGAGGAAA+GGG + chr8_2:3042751-3042770 Msa1227700:CDS 40.0%
TAGAGGAAAGGGGTCAATAA+AGG + chr8_2:3042762-3042781 Msa1227700:CDS 40.0%
GTCAATAAAGGATCCAGACA+AGG + chr8_2:3042774-3042793 Msa1227700:CDS 40.0%
AGGAAGAGAAATTGAGAGGA+AGG + chr8_2:3042928-3042947 Msa1227700:intron 40.0%
GCTTCAATCAATATGTGGAG+TGG - chr8_2:3042978-3042997 None:intergenic 40.0%
CTCATGTCAACAACATTAGC+AGG - chr8_2:3043008-3043027 None:intergenic 40.0%
CTGCTAATGTTGTTGACATG+AGG + chr8_2:3043006-3043025 Msa1227700:CDS 40.0%
AGCATCATTTCAACACCAGA+TGG + chr8_2:3043361-3043380 Msa1227700:intron 40.0%
!! CAAGGAAAAGGTATTCCATC+TGG - chr8_2:3043379-3043398 None:intergenic 40.0%
AACGATAACATGGTTGTGTC+CGG - chr8_2:3043526-3043545 None:intergenic 40.0%
AATTTGAGAGAAGAGAGTCC+TGG + chr8_2:3043716-3043735 Msa1227700:CDS 40.0%
! GCGTCCTTGTTATCTTAGAT+TGG + chr8_2:3043806-3043825 Msa1227700:three_prime_UTR 40.0%
TGCAAGATATTCCCAGCAAT+GGG - chr8_2:3043846-3043865 None:intergenic 40.0%
! ATTATTGCTGGCTAGCATTC+TGG + chr8_2:3043907-3043926 Msa1227700:three_prime_UTR 40.0%
! CAATAACTTGCGTAGAAGTG+TGG + chr8_2:3044084-3044103 Msa1227700:three_prime_UTR 40.0%
TAGCTAGCTAGCAGCAGTTA+GGG + chr8_2:3040558-3040577 Msa1227700:five_prime_UTR 45.0%
! CTCCTTTTGTGAACTCGATC+GGG + chr8_2:3040588-3040607 Msa1227700:five_prime_UTR 45.0%
TCAATCATCATGTCAGGAGG+AGG + chr8_2:3040628-3040647 Msa1227700:exon 45.0%
CAATCATCATGTCAGGAGGA+GGG + chr8_2:3040629-3040648 Msa1227700:exon 45.0%
GCATCACAGTCAGTATCTGT+CGG + chr8_2:3040793-3040812 Msa1227700:intron 45.0%
TCAGTATCTGTCGGAGTTAC+TGG + chr8_2:3040802-3040821 Msa1227700:CDS 45.0%
! CTGGCAGAGTATCAGAAACT+TGG + chr8_2:3040821-3040840 Msa1227700:CDS 45.0%
TTCAAGAGACGACTGGAGTT+GGG - chr8_2:3040866-3040885 None:intergenic 45.0%
ATTCAAGAGACGACTGGAGT+TGG - chr8_2:3040867-3040886 None:intergenic 45.0%
TCCAGTCGTCTCTTGAATCA+AGG + chr8_2:3040869-3040888 Msa1227700:CDS 45.0%
ACCTTGATTCAAGAGACGAC+TGG - chr8_2:3040873-3040892 None:intergenic 45.0%
ACATAGGACTAGGGCTTCTA+TGG - chr8_2:3041059-3041078 None:intergenic 45.0%
GTGAGGTTTGAGGAAGACAT+AGG - chr8_2:3041075-3041094 None:intergenic 45.0%
ATGTCTTCCTCAAACCTCAC+TGG + chr8_2:3041075-3041094 Msa1227700:CDS 45.0%
ATTCCATCCAGTGAGGTTTG+AGG - chr8_2:3041085-3041104 None:intergenic 45.0%
!! CTGACGGATTCATAGACTGT+AGG - chr8_2:3041339-3041358 None:intergenic 45.0%
TTGCAGAGAGTGATACCTCA+GGG + chr8_2:3041476-3041495 Msa1227700:intron 45.0%
ATGTTAAGGACCTCCATTGG+AGG - chr8_2:3041866-3041885 None:intergenic 45.0%
TGGAGGTCCTTAACATGTTG+AGG + chr8_2:3041870-3041889 Msa1227700:intron 45.0%
GGGGAGTCCTTTACCTAATA+AGG - chr8_2:3041897-3041916 None:intergenic 45.0%
TTAGGTAAAGGACTCCCCAT+TGG + chr8_2:3041899-3041918 Msa1227700:intron 45.0%
! CTACTAGAGCATCTCCAATG+GGG - chr8_2:3041916-3041935 None:intergenic 45.0%
AAATTGCTAACGGGATGGTC+AGG + chr8_2:3042115-3042134 Msa1227700:intron 45.0%
CAGAGATTATGTGGAACTCC+TGG + chr8_2:3042420-3042439 Msa1227700:intron 45.0%
TGGAACTCCTGGAATGACAA+TGG + chr8_2:3042431-3042450 Msa1227700:CDS 45.0%
CTCCTGGAATGACAATGGAT+TGG + chr8_2:3042436-3042455 Msa1227700:CDS 45.0%
TGCCAATCCATTGTCATTCC+AGG - chr8_2:3042441-3042460 None:intergenic 45.0%
!! GGAATGACAATGGATTGGCA+AGG + chr8_2:3042441-3042460 Msa1227700:CDS 45.0%
TTTGCGCTTGGAAATTCCAG+TGG + chr8_2:3042503-3042522 Msa1227700:CDS 45.0%
AAACGGGTAGAAGCTACTAC+AGG + chr8_2:3042724-3042743 Msa1227700:CDS 45.0%
TAGAAGCTACTACAGGTTGC+AGG + chr8_2:3042731-3042750 Msa1227700:CDS 45.0%
AGAAGCTACTACAGGTTGCA+GGG + chr8_2:3042732-3042751 Msa1227700:CDS 45.0%
! CAGGGTGTTCATTAGAGGAA+AGG + chr8_2:3042750-3042769 Msa1227700:CDS 45.0%
GGGTGTTCATTAGAGGAAAG+GGG + chr8_2:3042752-3042771 Msa1227700:CDS 45.0%
AGAAATTGAGAGGAAGGCCA+GGG + chr8_2:3042934-3042953 Msa1227700:CDS 45.0%
TCATTGAGATGCTCATACCC+TGG - chr8_2:3042954-3042973 None:intergenic 45.0%
ATGTTGTTGACATGAGGCTC+AGG + chr8_2:3043012-3043031 Msa1227700:CDS 45.0%
GAAGTGAAGGAACTTACCAC+AGG - chr8_2:3043071-3043090 None:intergenic 45.0%
ACGATAACATGGTTGTGTCC+GGG - chr8_2:3043525-3043544 None:intergenic 45.0%
TCATCAAAAGGCAGCAGTTG+CGG + chr8_2:3043672-3043691 Msa1227700:CDS 45.0%
AATGGAGATACACTACCGCT+TGG - chr8_2:3043743-3043762 None:intergenic 45.0%
GGAATGAAGCGAGCAAAAAC+TGG + chr8_2:3043773-3043792 Msa1227700:CDS 45.0%
CTGCAAGATATTCCCAGCAA+TGG - chr8_2:3043847-3043866 None:intergenic 45.0%
CGTTACATGCCCACAAAACT+TGG - chr8_2:3044149-3044168 None:intergenic 45.0%
CAAATGCCCACATACATGAG+AGG - chr8_2:3044281-3044300 None:intergenic 45.0%
CTAACTGCTGCTAGCTAGCT+AGG - chr8_2:3040559-3040578 None:intergenic 50.0%
CTAGCTAGCTAGCAGCAGTT+AGG + chr8_2:3040557-3040576 Msa1227700:five_prime_UTR 50.0%
CACCCGATCGAGTTCACAAA+AGG - chr8_2:3040593-3040612 None:intergenic 50.0%
! CTTTTGTGAACTCGATCGGG+TGG + chr8_2:3040591-3040610 Msa1227700:five_prime_UTR 50.0%
CTCACAGGGGAAGAGAAGTT+CGG - chr8_2:3040664-3040683 None:intergenic 50.0%
CTTCCTCAAACCTCACTGGA+TGG + chr8_2:3041079-3041098 Msa1227700:CDS 50.0%
GTTGCAGAGAGTGATACCTC+AGG + chr8_2:3041475-3041494 Msa1227700:intron 50.0%
TGCAGAGAGTGATACCTCAG+GGG + chr8_2:3041477-3041496 Msa1227700:intron 50.0%
ATACCTCAGGGGCTAAAGTG+AGG + chr8_2:3041488-3041507 Msa1227700:intron 50.0%
TACCTCAGGGGCTAAAGTGA+GGG + chr8_2:3041489-3041508 Msa1227700:intron 50.0%
GTGTATGAGCTAGGACTTGC+AGG - chr8_2:3042471-3042490 None:intergenic 50.0%
! GGTTGCAGGGTGTTCATTAG+AGG + chr8_2:3042745-3042764 Msa1227700:CDS 50.0%
GAGAAATTGAGAGGAAGGCC+AGG + chr8_2:3042933-3042952 Msa1227700:CDS 50.0%
CATCAAAAGGCAGCAGTTGC+GGG + chr8_2:3043673-3043692 Msa1227700:CDS 50.0%
TTTGTCTGGCAACCCATTGC+TGG + chr8_2:3043831-3043850 Msa1227700:three_prime_UTR 50.0%
TTGTCTGGCAACCCATTGCT+GGG + chr8_2:3043832-3043851 Msa1227700:three_prime_UTR 50.0%
! ATTGCTGGCTAGCATTCTGG+TGG + chr8_2:3043910-3043929 Msa1227700:three_prime_UTR 50.0%
TGTAACGTGCCAAGTCTCAC+TGG + chr8_2:3044162-3044181 Msa1227700:three_prime_UTR 50.0%
CTAGCTAGCAGCAGTTAGGG+AGG + chr8_2:3040561-3040580 Msa1227700:five_prime_UTR 55.0%
AGGTGAAGCAGCTCTCACAG+GGG - chr8_2:3040677-3040696 None:intergenic 55.0%
GAGGTGAAGCAGCTCTCACA+GGG - chr8_2:3040678-3040697 None:intergenic 55.0%
TGAGGTGAAGCAGCTCTCAC+AGG - chr8_2:3040679-3040698 None:intergenic 55.0%
AGAGACGACTGGAGTTGGGA+AGG - chr8_2:3040862-3040881 None:intergenic 55.0%
AACCCTCACTTTAGCCCCTG+AGG - chr8_2:3041494-3041513 None:intergenic 55.0%
!! GGAAGACTTCTGGGACCTAG+AGG + chr8_2:3042691-3042710 Msa1227700:CDS 55.0%
TGTTGACATGAGGCTCAGGC+AGG + chr8_2:3043016-3043035 Msa1227700:CDS 55.0%
TCTCCGTGTTAGGCTGTGTG+AGG + chr8_2:3043105-3043124 Msa1227700:intron 55.0%
CCACCTCACACAGCCTAACA+CGG - chr8_2:3043111-3043130 None:intergenic 55.0%
AAGGCAGCAGTTGCGGGAAT+TGG + chr8_2:3043679-3043698 Msa1227700:CDS 55.0%
GAAGAGAGTCCTGGACCAAG+CGG + chr8_2:3043725-3043744 Msa1227700:CDS 55.0%
GATACACTACCGCTTGGTCC+AGG - chr8_2:3043737-3043756 None:intergenic 55.0%
CCGTGTTAGGCTGTGTGAGG+TGG + chr8_2:3043108-3043127 Msa1227700:intron 60.0%
CATGAGGCTCAGGCAGGCTC+AGG + chr8_2:3043022-3043041 Msa1227700:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 3040473 3044334 3040473 ID=Msa1227700;Name=Msa1227700
chr8_2 mRNA 3040473 3044334 3040473 ID=Msa1227700-mRNA-1;Parent=Msa1227700;Name=Msa1227700-mRNA-1;_AED=0.15;_eAED=0.15;_QI=164|1|1|1|1|1|7|532|276
chr8_2 exon 3040473 3040728 3040473 ID=Msa1227700-mRNA-1:exon:839;Parent=Msa1227700-mRNA-1
chr8_2 exon 3040802 3040890 3040802 ID=Msa1227700-mRNA-1:exon:840;Parent=Msa1227700-mRNA-1
chr8_2 exon 3040995 3041119 3040995 ID=Msa1227700-mRNA-1:exon:841;Parent=Msa1227700-mRNA-1
chr8_2 exon 3042423 3042539 3042423 ID=Msa1227700-mRNA-1:exon:842;Parent=Msa1227700-mRNA-1
chr8_2 exon 3042679 3042795 3042679 ID=Msa1227700-mRNA-1:exon:843;Parent=Msa1227700-mRNA-1
chr8_2 exon 3042930 3043073 3042930 ID=Msa1227700-mRNA-1:exon:844;Parent=Msa1227700-mRNA-1
chr8_2 exon 3043656 3044334 3043656 ID=Msa1227700-mRNA-1:exon:845;Parent=Msa1227700-mRNA-1
chr8_2 five_prime_UTR 3040473 3040636 3040473 ID=Msa1227700-mRNA-1:five_prime_utr;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3040637 3040728 3040637 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3040802 3040890 3040802 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3040995 3041119 3040995 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3042423 3042539 3042423 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3042679 3042795 3042679 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3042930 3043073 3042930 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 CDS 3043656 3043802 3043656 ID=Msa1227700-mRNA-1:cds;Parent=Msa1227700-mRNA-1
chr8_2 three_prime_UTR 3043803 3044334 3043803 ID=Msa1227700-mRNA-1:three_prime_utr;Parent=Msa1227700-mRNA-1
Gene Sequence

>Msa1227700

ATGTCAGGAGGAGGGTTGTATAATCCGAACTTCTCTTCCCCTGTGAGAGCTGCTTCACCTCAGATTAGACCTAATTCAGATATCATCGACAGTCAGTATCTGTCGGAGTTACTGGCAGAGTATCAGAAACTTGGACCATTCATCAAAATCCTTCCCAACTCCAGTCGTCTCTTGAATCAAGAAATATTAAGAGTTTCTGGAATGTTATCCAATCAAGGTTTTGCTGACTTTGACAGACTGCGCCATAGAAGCCCTAGTCCTATGTCTTCCTCAAACCTCACTGGATGGAATAATCTTCAACACGAGAGATTATGTGGAACTCCTGGAATGACAATGGATTGGCAAGGCGCGCCTGCAAGTCCTAGCTCATACACTGTTAAAAGGATTTTGCGCTTGGAAATTCCAGTGGATACATACCCTAATTTCAATTTTGTTGGAAGACTTCTGGGACCTAGAGGAAATTCTTTGAAACGGGTAGAAGCTACTACAGGTTGCAGGGTGTTCATTAGAGGAAAGGGGTCAATAAAGGATCCAGACAAGGAAGAGAAATTGAGAGGAAGGCCAGGGTATGAGCATCTCAATGAGCCACTCCACATATTGATTGAAGCCGATTTACCTGCTAATGTTGTTGACATGAGGCTCAGGCAGGCTCAGGAAATTATAGAAGAATTACTGAAACCTGTGGATGAGTCAGAAGATTTCATCAAAAGGCAGCAGTTGCGGGAATTGGCATTGCTGAATTCAAATTTGAGAGAAGAGAGTCCTGGACCAAGCGGTAGTGTATCTCCATTTAATTCTAGTGGAATGAAGCGAGCAAAAACTGGTAGATGA
Protein sequence

>Msa1227700

MSGGGLYNPNFSSPVRAASPQIRPNSDIIDSQYLSELLAEYQKLGPFIKILPNSSRLLNQEILRVSGMLSNQGFADFDRLRHRSPSPMSSSNLTGWNNLQHERLCGTPGMTMDWQGAPASPSSYTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDMRLRQAQEIIEELLKPVDESEDFIKRQQLRELALLNSNLREESPGPSGSVSPFNSSGMKRAKTGR*