Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369470 | XP_039684689.1 | 99.638 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369470 | sp|Q9ZVI3|QKIL3_ARATH | 80.986 | 284 | 40 | 5 | 5 | 275 | 3 | 285 | 2.25e-159 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369470 | G7LAP5 | 99.638 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 0.0 | 560 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029630 | Msa1369470 | 0.800149 | 1.649966e-48 | -8.615850e-47 |
| Msa0047980 | Msa1369470 | 0.821088 | 4.862590e-53 | -8.615850e-47 |
| Msa0069330 | Msa1369470 | 0.807852 | 4.127310e-50 | -8.615850e-47 |
| Msa0079920 | Msa1369470 | 0.802962 | 4.373587e-49 | -8.615850e-47 |
| Msa0104550 | Msa1369470 | 0.803176 | 3.950141e-49 | -8.615850e-47 |
| Msa1358360 | Msa1369470 | 0.826983 | 2.010582e-54 | -8.615850e-47 |
| Msa1369470 | Msa1381350 | 0.808455 | 3.070571e-50 | -8.615850e-47 |
| Msa1369470 | Msa1402400 | 0.800856 | 1.184372e-48 | -8.615850e-47 |
| Msa0642720 | Msa1369470 | 0.813513 | 2.463721e-51 | -8.615850e-47 |
| Msa0692840 | Msa1369470 | 0.801913 | 7.195558e-49 | -8.615850e-47 |
| Msa0711890 | Msa1369470 | 0.802337 | 5.884548e-49 | -8.615850e-47 |
| Msa0750170 | Msa1369470 | 0.805988 | 1.023068e-49 | -8.615850e-47 |
| Msa0794730 | Msa1369470 | 0.806049 | 9.935442e-50 | -8.615850e-47 |
| Msa0125450 | Msa1369470 | 0.812234 | 4.697764e-51 | -8.615850e-47 |
| Msa0125540 | Msa1369470 | 0.810515 | 1.109518e-50 | -8.615850e-47 |
| Msa0225180 | Msa1369470 | 0.807199 | 5.681215e-50 | -8.615850e-47 |
| Msa1227700 | Msa1369470 | 0.930965 | 7.575495e-94 | -8.615850e-47 |
| Msa1302550 | Msa1369470 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa0369850 | Msa1369470 | 0.805920 | 1.057318e-49 | -8.615850e-47 |
| Msa0376120 | Msa1369470 | 0.817779 | 2.762234e-52 | -8.615850e-47 |
| Msa0376280 | Msa1369470 | 0.817144 | 3.839205e-52 | -8.615850e-47 |
| Msa0376300 | Msa1369470 | 0.827888 | 1.220021e-54 | -8.615850e-47 |
| Msa0376310 | Msa1369470 | 0.818724 | 1.688325e-52 | -8.615850e-47 |
| Msa0410500 | Msa1369470 | 0.800588 | 1.343461e-48 | -8.615850e-47 |
| Msa0474950 | Msa1369470 | 0.847175 | 1.365532e-59 | -8.615850e-47 |
| Msa0300120 | Msa1369470 | 0.823613 | 1.260471e-53 | -8.615850e-47 |
| Msa0311700 | Msa1369470 | 0.810956 | 8.908311e-51 | -8.615850e-47 |
| Msa1113670 | Msa1369470 | 0.802535 | 5.358126e-49 | -8.615850e-47 |
| Msa1128600 | Msa1369470 | 0.810812 | 9.569211e-51 | -8.615850e-47 |
| Msa1184380 | Msa1369470 | 0.966364 | 8.028177e-126 | -8.615850e-47 |
| Msa1223870 | Msa1369470 | 0.811618 | 6.397980e-51 | -8.615850e-47 |
| Msa0923330 | Msa1369470 | 0.805566 | 1.254748e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369470 | MtrunA17_Chr8g0334451 | 99.638 | 276 | 1 | 0 | 1 | 276 | 1 | 276 | 0.0 | 560 |
| Msa1369470 | MtrunA17_Chr7g0245301 | 84.698 | 281 | 32 | 3 | 5 | 276 | 3 | 281 | 1.15e-171 | 475 |
| Msa1369470 | MtrunA17_Chr5g0432901 | 67.845 | 283 | 72 | 6 | 5 | 274 | 3 | 279 | 1.30e-128 | 366 |
| Msa1369470 | MtrunA17_Chr3g0108401 | 70.115 | 261 | 69 | 3 | 22 | 274 | 1 | 260 | 2.54e-127 | 362 |
| Msa1369470 | MtrunA17_Chr3g0080071 | 57.576 | 264 | 97 | 7 | 24 | 274 | 30 | 291 | 5.42e-93 | 276 |
| Msa1369470 | MtrunA17_Chr2g0276961 | 52.874 | 261 | 107 | 5 | 32 | 276 | 52 | 312 | 7.40e-80 | 243 |
| Msa1369470 | MtrunA17_Chr4g0018581 | 47.154 | 123 | 59 | 3 | 131 | 253 | 217 | 333 | 1.57e-26 | 108 |
| Msa1369470 | MtrunA17_Chr7g0267531 | 38.889 | 90 | 39 | 3 | 85 | 168 | 2 | 81 | 2.82e-12 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369470 | AT2G38610.2 | 80.986 | 284 | 40 | 5 | 5 | 275 | 3 | 285 | 2.28e-160 | 447 |
| Msa1369470 | AT2G38610.1 | 80.986 | 284 | 40 | 5 | 5 | 275 | 3 | 285 | 2.28e-160 | 447 |
| Msa1369470 | AT3G08620.1 | 75.801 | 281 | 59 | 1 | 5 | 276 | 3 | 283 | 1.32e-153 | 430 |
| Msa1369470 | AT3G08620.2 | 76.471 | 238 | 47 | 1 | 48 | 276 | 1 | 238 | 5.55e-131 | 371 |
| Msa1369470 | AT4G26480.3 | 54.545 | 275 | 108 | 3 | 8 | 274 | 41 | 306 | 2.38e-97 | 288 |
| Msa1369470 | AT4G26480.1 | 54.545 | 275 | 108 | 3 | 8 | 274 | 41 | 306 | 2.38e-97 | 288 |
| Msa1369470 | AT5G56140.1 | 55.957 | 277 | 103 | 6 | 8 | 274 | 45 | 312 | 2.86e-97 | 288 |
| Msa1369470 | AT1G09660.1 | 52.536 | 276 | 103 | 6 | 18 | 274 | 30 | 296 | 1.22e-87 | 263 |
| Msa1369470 | AT1G09660.3 | 52.536 | 276 | 103 | 6 | 18 | 274 | 30 | 296 | 1.22e-87 | 263 |
| Msa1369470 | AT4G26480.2 | 56.889 | 225 | 85 | 2 | 58 | 274 | 1 | 221 | 1.54e-84 | 253 |
| Msa1369470 | AT1G09660.2 | 50.220 | 227 | 94 | 4 | 18 | 231 | 30 | 250 | 1.89e-69 | 216 |
| Msa1369470 | AT5G51300.1 | 44.800 | 125 | 59 | 3 | 131 | 253 | 244 | 360 | 9.09e-25 | 103 |
| Msa1369470 | AT5G51300.2 | 44.800 | 125 | 59 | 3 | 131 | 253 | 244 | 360 | 9.09e-25 | 103 |
| Msa1369470 | AT5G51300.3 | 44.800 | 125 | 59 | 3 | 131 | 253 | 244 | 360 | 9.09e-25 | 103 |
Find 115 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGAAATATTAAGAGTTTC+TGG | 0.168767 | tig0018782:-204764 | Msa1369470:intron |
| CTTCAATGCATTATACCTTT+TGG | 0.270525 | tig0018782:+201530 | None:intergenic |
| TCAGTATCTGTCGGAGTTAC+TGG | 0.279180 | tig0018782:-204953 | Msa1369470:CDS |
| ATTATTGCTGGCTAGCATTC+TGG | 0.289681 | tig0018782:-201848 | Msa1369470:three_prime_UTR |
| AAGATTTACATTACCTTGTC+TGG | 0.294455 | tig0018782:+202968 | None:intergenic |
| TTCATTCCACTAGAATTAAA+TGG | 0.295208 | tig0018782:+201997 | None:intergenic |
| CTAGCTCATACACTGTTAAA+AGG | 0.340370 | tig0018782:-203277 | Msa1369470:CDS |
| ACATAGGACTAGGGCTTCTA+TGG | 0.342273 | tig0018782:+204699 | None:intergenic |
| CTGTCGATGATATCTGAATT+AGG | 0.343691 | tig0018782:+205053 | None:intergenic |
| AAGGCAGCAGTTGCGGGAAT+TGG | 0.349647 | tig0018782:-202076 | Msa1369470:CDS |
| TGCCAATCCATTGTCATTCC+AGG | 0.353094 | tig0018782:+203317 | None:intergenic |
| CGTTACATGCCCACAAAACT+TGG | 0.365724 | tig0018782:+201609 | None:intergenic |
| CATCAAAAGGCAGCAGTTGC+GGG | 0.365876 | tig0018782:-202082 | Msa1369470:CDS |
| GTGTATGAGCTAGGACTTGC+AGG | 0.375348 | tig0018782:+203287 | None:intergenic |
| TTTGTCCAGCAACCCATTGC+TGG | 0.376194 | tig0018782:-201924 | Msa1369470:three_prime_UTR |
| CTAGCTAGCTAGCAGCAGTT+AGG | 0.384122 | tig0018782:-205202 | Msa1369470:five_prime_UTR |
| TATTAAGAATAGGCTTGTTC+AGG | 0.389072 | tig0018782:-201744 | Msa1369470:three_prime_UTR |
| GGTTGCAGGGTGTTCATTAG+AGG | 0.391007 | tig0018782:-203010 | Msa1369470:CDS |
| TATTCCCAGCAATGGGTTGC+TGG | 0.394774 | tig0018782:+201919 | None:intergenic |
| CTAACTGCTGCTAGCTAGCT+AGG | 0.395260 | tig0018782:+205203 | None:intergenic |
| AAAGTCAGCAAAACCTTGAT+TGG | 0.400137 | tig0018782:+204733 | None:intergenic |
| AAATGATAAAATAATTATGT+TGG | 0.403419 | tig0018782:-201768 | Msa1369470:three_prime_UTR |
| ATTGTTGGTAGTAAAGTATA+TGG | 0.411984 | tig0018782:-205271 | Msa1369470:five_prime_UTR |
| TAGAGGAAAGGGGTCAATAA+AGG | 0.414307 | tig0018782:-202993 | Msa1369470:CDS |
| TAGCTAGCTAGCAGCAGTTA+GGG | 0.418562 | tig0018782:-205201 | Msa1369470:five_prime_UTR |
| TTATGTTGGGTATTAAGAAT+AGG | 0.419104 | tig0018782:-201754 | Msa1369470:three_prime_UTR |
| TAGAGGAAATTCTTTGAAAC+GGG | 0.419651 | tig0018782:-203047 | Msa1369470:CDS |
| AAGGTATAATGCATTGAAGT+TGG | 0.420274 | tig0018782:-201526 | Msa1369470:three_prime_UTR |
| GAGAAATTGAGAGGAAGGCC+AGG | 0.421826 | tig0018782:-202822 | Msa1369470:CDS |
| TAGAAGCTACTACAGGTTGC+AGG | 0.428180 | tig0018782:-203024 | Msa1369470:CDS |
| GCGTCCTTGTTATCTTAGAT+TGG | 0.428630 | tig0018782:-201949 | Msa1369470:three_prime_UTR |
| AACAACATTAGCAGGTAAAT+CGG | 0.430932 | tig0018782:+202758 | None:intergenic |
| AGTGTGGAATATACAAATGA+TGG | 0.431956 | tig0018782:-201655 | Msa1369470:three_prime_UTR |
| ATTCAAGAGACGACTGGAGT+TGG | 0.441155 | tig0018782:+204891 | None:intergenic |
| CTAGAGGAAATTCTTTGAAA+CGG | 0.441382 | tig0018782:-203048 | Msa1369470:CDS |
| AATAGACTGACAATTATTGC+TGG | 0.442103 | tig0018782:-201860 | Msa1369470:three_prime_UTR |
| ATTACTGATCGATTGATTGT+TGG | 0.445987 | tig0018782:-205286 | Msa1369470:five_prime_UTR |
| AATCAATCAATCATCATGTC+AGG | 0.454921 | tig0018782:-205137 | Msa1369470:exon |
| TTCAAGAGACGACTGGAGTT+GGG | 0.455513 | tig0018782:+204892 | None:intergenic |
| TCTGGAATGTTATCCAATCA+AGG | 0.455692 | tig0018782:-204746 | Msa1369470:CDS |
| TGTATTAAGTTAAAATGAAA+AGG | 0.464748 | tig0018782:+201716 | None:intergenic |
| CTGGCAGAGTATCAGAAACT+TGG | 0.466295 | tig0018782:-204934 | Msa1369470:CDS |
| CAGAGATTATGTGGAACTCC+TGG | 0.480586 | tig0018782:-203335 | Msa1369470:CDS |
| AATGATAAAATAATTATGTT+GGG | 0.480870 | tig0018782:-201767 | Msa1369470:three_prime_UTR |
| AGGGTGTTCATTAGAGGAAA+GGG | 0.481670 | tig0018782:-203004 | Msa1369470:CDS |
| TCATCAAAAGGCAGCAGTTG+CGG | 0.493688 | tig0018782:-202083 | Msa1369470:CDS |
| CATGAGGCTCAGGCAGGCTC+AGG | 0.496803 | tig0018782:-202733 | Msa1369470:CDS |
| AGGAAGAGAAATTGAGAGGA+AGG | 0.498722 | tig0018782:-202827 | Msa1369470:CDS |
| AGTCAGAAGATTTCATCAAA+AGG | 0.500025 | tig0018782:-202095 | Msa1369470:CDS |
| GTATCTCCATTTAATTCTAG+TGG | 0.500971 | tig0018782:-202003 | Msa1369470:CDS |
| TGCAAGATATTCCCAGCAAT+GGG | 0.502926 | tig0018782:+201912 | None:intergenic |
| TCCAGTCGTCTCTTGAATCA+AGG | 0.503507 | tig0018782:-204886 | Msa1369470:intron |
| CATTTGTAATTCCTTCCAAA+AGG | 0.505873 | tig0018782:-201545 | Msa1369470:three_prime_UTR |
| TGAGGTGAAGCAGCTCTCAC+AGG | 0.506055 | tig0018782:+205083 | None:intergenic |
| CACCCGATCGAGTTCACAAA+AGG | 0.512463 | tig0018782:+205169 | None:intergenic |
| CGTTTCAAAGAATTTCCTCT+AGG | 0.514490 | tig0018782:+203049 | None:intergenic |
| CTCATGTCAACAACATTAGC+AGG | 0.516459 | tig0018782:+202750 | None:intergenic |
| TGTAACGTGCCAAGTCTCAC+TGG | 0.516863 | tig0018782:-201593 | Msa1369470:three_prime_UTR |
| CTGCAAGATATTCCCAGCAA+TGG | 0.517768 | tig0018782:+201911 | None:intergenic |
| TTGTCCAGCAACCCATTGCT+GGG | 0.524207 | tig0018782:-201923 | Msa1369470:three_prime_UTR |
| TTTGAGGAAGACATAGGACT+AGG | 0.524772 | tig0018782:+204689 | None:intergenic |
| ATGTCTTCCTCAAACCTCAC+TGG | 0.528865 | tig0018782:-204680 | Msa1369470:CDS |
| GATACACTACCGCTTGGTCC+AGG | 0.531690 | tig0018782:+202021 | None:intergenic |
| AATTTGAGAGAAGAGAGTCC+TGG | 0.532553 | tig0018782:-202039 | Msa1369470:CDS |
| CAGGGTGTTCATTAGAGGAA+AGG | 0.533462 | tig0018782:-203005 | Msa1369470:CDS |
| ACCTTGATTCAAGAGACGAC+TGG | 0.540514 | tig0018782:+204885 | None:intergenic |
| CTCACAGGGGAAGAGAAGTT+CGG | 0.542933 | tig0018782:+205098 | None:intergenic |
| ATTCCATCCAGTGAGGTTTG+AGG | 0.543328 | tig0018782:+204673 | None:intergenic |
| ATGTTGTTGACATGAGGCTC+AGG | 0.547815 | tig0018782:-202743 | Msa1369470:CDS |
| CTTCCTCAAACCTCACTGGA+TGG | 0.549823 | tig0018782:-204676 | Msa1369470:CDS |
| CTCCTGGAATGACAATGGAT+TGG | 0.551744 | tig0018782:-203319 | Msa1369470:CDS |
| CTTTAGGAAGAGAAATTGAG+AGG | 0.552994 | tig0018782:-202831 | Msa1369470:intron |
| TCAATCATCATGTCAGGAGG+AGG | 0.557397 | tig0018782:-205131 | Msa1369470:exon |
| TCATTGAGATGCTCATACCC+TGG | 0.561509 | tig0018782:+202804 | None:intergenic |
| TGTTGACATGAGGCTCAGGC+AGG | 0.566625 | tig0018782:-202739 | Msa1369470:CDS |
| ATTGCTGGCTAGCATTCTGG+TGG | 0.568630 | tig0018782:-201845 | Msa1369470:three_prime_UTR |
| GAGGTGAAGCAGCTCTCACA+GGG | 0.572330 | tig0018782:+205084 | None:intergenic |
| ACCATTGTTATCCAGAATGT+AGG | 0.575638 | tig0018782:+201804 | None:intergenic |
| CAATAACTTGCGTAGAAGTG+TGG | 0.575641 | tig0018782:-201671 | Msa1369470:three_prime_UTR |
| CTAATTCAGATATCATCGAC+AGG | 0.576685 | tig0018782:-205052 | Msa1369470:intron |
| TCCAGAATGTAGGATAAAAG+AGG | 0.576719 | tig0018782:+201814 | None:intergenic |
| AATCGGCTTCAATCAATATG+TGG | 0.580900 | tig0018782:+202775 | None:intergenic |
| GTGTGGAATATACAAATGAT+GGG | 0.585785 | tig0018782:-201654 | Msa1369470:three_prime_UTR |
| ACATTAGGGTATGTATCCAC+TGG | 0.586251 | tig0018782:+203236 | None:intergenic |
| CTAGCTAGCAGCAGTTAGGG+AGG | 0.589301 | tig0018782:-205198 | Msa1369470:five_prime_UTR |
| TTTGCGCTTGGAAATTCCAG+TGG | 0.591711 | tig0018782:-203252 | Msa1369470:CDS |
| AAAAGTCCTCTCATGTATGT+GGG | 0.596328 | tig0018782:-201483 | Msa1369470:three_prime_UTR |
| TTGAGGAAGACATAGGACTA+GGG | 0.597915 | tig0018782:+204690 | None:intergenic |
| AGAGACGACTGGAGTTGGGA+AGG | 0.600245 | tig0018782:+204896 | None:intergenic |
| AATGGAGATACACTACCGCT+TGG | 0.602927 | tig0018782:+202015 | None:intergenic |
| AAACGGGTAGAAGCTACTAC+AGG | 0.604629 | tig0018782:-203031 | Msa1369470:CDS |
| CTGCTAATGTTGTTGACATG+AGG | 0.608129 | tig0018782:-202749 | Msa1369470:CDS |
| TACATTCTGGATAACAATGG+TGG | 0.609153 | tig0018782:-201802 | Msa1369470:three_prime_UTR |
| AGAAATTGAGAGGAAGGCCA+GGG | 0.611308 | tig0018782:-202821 | Msa1369470:CDS |
| GCATTGAAGTTGGAATATGA+AGG | 0.614137 | tig0018782:-201516 | Msa1369470:three_prime_UTR |
| GTGAGGTTTGAGGAAGACAT+AGG | 0.616403 | tig0018782:+204683 | None:intergenic |
| GGAAGACTTCTGGGACCTAG+AGG | 0.616576 | tig0018782:-203064 | Msa1369470:CDS |
| GTCAATAAAGGATCCAGACA+AGG | 0.622267 | tig0018782:-202981 | Msa1369470:intron |
| AGAAGCTACTACAGGTTGCA+GGG | 0.622380 | tig0018782:-203023 | Msa1369470:CDS |
| GCATCACAGTCAGTATCTGT+CGG | 0.627770 | tig0018782:-204962 | Msa1369470:intron |
| TGGAACTCCTGGAATGACAA+TGG | 0.632407 | tig0018782:-203324 | Msa1369470:CDS |
| TCCTACATTCTGGATAACAA+TGG | 0.634851 | tig0018782:-201805 | Msa1369470:three_prime_UTR |
| CAATCATCATGTCAGGAGGA+GGG | 0.636739 | tig0018782:-205130 | Msa1369470:exon |
| CAATCAATCATCATGTCAGG+AGG | 0.650767 | tig0018782:-205134 | Msa1369470:exon |
| GAAGAGAGTCCTGGACCAAG+CGG | 0.652639 | tig0018782:-202030 | Msa1369470:CDS |
| GCTTCAATCAATATGTGGAG+TGG | 0.654500 | tig0018782:+202780 | None:intergenic |
| GGGTGTTCATTAGAGGAAAG+GGG | 0.662017 | tig0018782:-203003 | Msa1369470:CDS |
| GGAATGACAATGGATTGGCA+AGG | 0.664517 | tig0018782:-203314 | Msa1369470:CDS |
| AATACCAATCTAAGATAACA+AGG | 0.668830 | tig0018782:+201945 | None:intergenic |
| CAAATGCCCACATACATGAG+AGG | 0.671727 | tig0018782:+201477 | None:intergenic |
| GAAGATTATTCCATCCAGTG+AGG | 0.674240 | tig0018782:+204666 | None:intergenic |
| AGAAGAATTACTGAAACCTG+TGG | 0.674991 | tig0018782:-202703 | Msa1369470:intron |
| TCTGAATTAGGTCTAATCTG+AGG | 0.688043 | tig0018782:+205065 | None:intergenic |
| ATGGAATAATCTTCAACACG+AGG | 0.724420 | tig0018782:-204657 | Msa1369470:intron |
| AGGTGAAGCAGCTCTCACAG+GGG | 0.794731 | tig0018782:+205085 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTAAAAATTAATAATCT+TGG | - | tig0018782:203013-203032 | Msa1369470:CDS | 10.0% |
| !! | ATGTAAAAATTAATAATCTT+GGG | - | tig0018782:203014-203033 | Msa1369470:CDS | 10.0% |
| !! | AAATGATAAAATAATTATGT+TGG | - | tig0018782:204961-204980 | Msa1369470:intron | 10.0% |
| !! | AATGATAAAATAATTATGTT+GGG | - | tig0018782:204962-204981 | Msa1369470:intron | 10.0% |
| !!! | ATGTTTTTAATATACTTTAG+GGG | + | tig0018782:202284-202303 | None:intergenic | 15.0% |
| !!! | GATGTTTTTAATATACTTTA+GGG | + | tig0018782:202285-202304 | None:intergenic | 15.0% |
| !!! | AGATGTTTTTAATATACTTT+AGG | + | tig0018782:202286-202305 | None:intergenic | 15.0% |
| !!! | ACTAATTTTGATTTACTTTA+GGG | - | tig0018782:202421-202440 | Msa1369470:intron | 15.0% |
| !! | ATATTATTGAAACCTATTTA+AGG | + | tig0018782:202645-202664 | None:intergenic | 15.0% |
| !! | AAATGTTAAAATTTCAAAAG+TGG | - | tig0018782:203046-203065 | Msa1369470:CDS | 15.0% |
| !! | AAAAATAATCTGAAAAACAT+AGG | + | tig0018782:203321-203340 | None:intergenic | 15.0% |
| !! | ATATTTAGATTAATTCTAGT+TGG | + | tig0018782:203613-203632 | None:intergenic | 15.0% |
| !!! | TTGTTTCTTTAAATTTGATA+AGG | + | tig0018782:204190-204209 | None:intergenic | 15.0% |
| !! | AATATTGTCAAACAATTAAT+AGG | + | tig0018782:204315-204334 | None:intergenic | 15.0% |
| !! | TGTATTAAGTTAAAATGAAA+AGG | + | tig0018782:205016-205035 | None:intergenic | 15.0% |
| !! | ATTCATTCATTCATTGTTTA+TGG | - | tig0018782:201745-201764 | Msa1369470:three_prime_UTR | 20.0% |
| !!! | GACTAATTTTGATTTACTTT+AGG | - | tig0018782:202420-202439 | Msa1369470:intron | 20.0% |
| !!! | CTAATTTTGATTTACTTTAG+GGG | - | tig0018782:202422-202441 | Msa1369470:intron | 20.0% |
| !! | GAAAGAAAATAGATAAAAGT+TGG | + | tig0018782:202748-202767 | None:intergenic | 20.0% |
| !! | AAGAAAATAGAAATTGCTAA+CGG | - | tig0018782:203079-203098 | Msa1369470:CDS | 20.0% |
| !!! | TTTAGTTTCAAGAAAGATAA+AGG | + | tig0018782:203583-203602 | None:intergenic | 20.0% |
| !! | TTTATCTTTCTTGAAACTAA+AGG | - | tig0018782:203582-203601 | Msa1369470:intron | 20.0% |
| !! | TCATCAAAATGATTACTATT+TGG | + | tig0018782:204545-204564 | None:intergenic | 20.0% |
| !!! | TTTTAACTTAATACAGCTAT+TGG | - | tig0018782:205021-205040 | Msa1369470:intron | 20.0% |
| !!! | ATTGTTGGTAGTAAAGTATA+TGG | - | tig0018782:201458-201477 | Msa1369470:three_prime_UTR | 25.0% |
| ! | TAGTGATAAACTGCATAAAA+TGG | + | tig0018782:202145-202164 | None:intergenic | 25.0% |
| !! | GGAAGAATTTTCATATACTT+TGG | - | tig0018782:202369-202388 | Msa1369470:intron | 25.0% |
| !!! | ATCTTTTTAGTTTACTACCA+TGG | + | tig0018782:202519-202538 | None:intergenic | 25.0% |
| ! | ACTAAAAAGATCCCTTAAAT+AGG | - | tig0018782:202528-202547 | Msa1369470:intron | 25.0% |
| ! | TCAACTTAAGACCTATTTAA+GGG | + | tig0018782:202542-202561 | None:intergenic | 25.0% |
| !!! | TCATTTTAGTTTACTACGAT+TGG | + | tig0018782:202620-202639 | None:intergenic | 25.0% |
| ! | ACTAAAATGACTCCTTAAAT+AGG | - | tig0018782:202630-202649 | Msa1369470:intron | 25.0% |
| !!! | TTTCTTTCTTATTTTGATCG+TGG | - | tig0018782:202760-202779 | Msa1369470:CDS | 25.0% |
| !!! | TTCTTTCTTATTTTGATCGT+GGG | - | tig0018782:202761-202780 | Msa1369470:CDS | 25.0% |
| ! | AAAATGGATGCAACTATATA+AGG | + | tig0018782:202814-202833 | None:intergenic | 25.0% |
| ! | AGATAGTATGTTTGTATGTA+TGG | - | tig0018782:202908-202927 | Msa1369470:intron | 25.0% |
| ! | AGAAAATAGAAATTGCTAAC+GGG | - | tig0018782:203080-203099 | Msa1369470:intron | 25.0% |
| ! | GTGAATAGATCAATATACTA+TGG | + | tig0018782:203211-203230 | None:intergenic | 25.0% |
| ! | TGACATATGAACTTACATTA+GGG | + | tig0018782:203510-203529 | None:intergenic | 25.0% |
| ! | TTGACATATGAACTTACATT+AGG | + | tig0018782:203511-203530 | None:intergenic | 25.0% |
| !!! | ATGTCAATTCTAGTTCAATA+AGG | - | tig0018782:203524-203543 | Msa1369470:intron | 25.0% |
| !!! | TGTCAATTCTAGTTCAATAA+GGG | - | tig0018782:203525-203544 | Msa1369470:intron | 25.0% |
| !! | TTGCATTAGTTCAATTTTGT+TGG | - | tig0018782:203644-203663 | Msa1369470:intron | 25.0% |
| ! | TTGTTGTCCTTTAAATCTTT+AGG | - | tig0018782:203882-203901 | Msa1369470:intron | 25.0% |
| ! | TTCTCTTCCTAAAGATTTAA+AGG | + | tig0018782:203892-203911 | None:intergenic | 25.0% |
| !!! | TGCTTCATTTTGTTTAAGAA+TGG | - | tig0018782:204114-204133 | Msa1369470:intron | 25.0% |
| ! | AAGAAACAACTTTCTTACAA+TGG | - | tig0018782:204201-204220 | Msa1369470:intron | 25.0% |
| !!! | TTCGAAGTTTGTTAGTTATA+TGG | - | tig0018782:204225-204244 | Msa1369470:intron | 25.0% |
| ! | TCATTTGTTTAATTGAAGTC+AGG | - | tig0018782:204260-204279 | Msa1369470:intron | 25.0% |
| ! | AAATTTCACAAACAAGGAAA+AGG | + | tig0018782:204365-204384 | None:intergenic | 25.0% |
| ! | TAACAGAAATTTCACAAACA+AGG | + | tig0018782:204371-204390 | None:intergenic | 25.0% |
| ! | TCTTGATTTAAACGATAACA+TGG | + | tig0018782:204510-204529 | None:intergenic | 25.0% |
| ! | TCTTGTATATTCACTTTGTT+TGG | - | tig0018782:204585-204604 | Msa1369470:intron | 25.0% |
| !! | CTTGTATATTCACTTTGTTT+GGG | - | tig0018782:204586-204605 | Msa1369470:intron | 25.0% |
| ! | TTCATTCCACTAGAATTAAA+TGG | + | tig0018782:204735-204754 | None:intergenic | 25.0% |
| !! | AATACCAATCTAAGATAACA+AGG | + | tig0018782:204787-204806 | None:intergenic | 25.0% |
| ! | TTATGTTGGGTATTAAGAAT+AGG | - | tig0018782:204975-204994 | Msa1369470:intron | 25.0% |
| ATTACTGATCGATTGATTGT+TGG | - | tig0018782:201443-201462 | Msa1369470:three_prime_UTR | 30.0% | |
| AATCAATCAATCATCATGTC+AGG | - | tig0018782:201592-201611 | Msa1369470:three_prime_UTR | 30.0% | |
| ATGAATGAATGAATCAAGCA+AGG | + | tig0018782:201739-201758 | None:intergenic | 30.0% | |
| GCAGAAATATTAAGAGTTTC+TGG | - | tig0018782:201965-201984 | Msa1369470:exon | 30.0% | |
| ! | ATATACTTTAGGGGCTAAAT+TGG | + | tig0018782:202275-202294 | None:intergenic | 30.0% |
| !!! | ACCTTGCTGTTAAGATTTTA+GGG | - | tig0018782:202338-202357 | Msa1369470:intron | 30.0% |
| ! | ATACTTTGGATCTAAGATGA+TGG | - | tig0018782:202383-202402 | Msa1369470:intron | 30.0% |
| !! | GATGATGGATTTCATATACT+TGG | - | tig0018782:202398-202417 | Msa1369470:intron | 30.0% |
| !!! | TTTTTAGTTTACTACCATGG+TGG | + | tig0018782:202516-202535 | None:intergenic | 30.0% |
| GTCAACTTAAGACCTATTTA+AGG | + | tig0018782:202543-202562 | None:intergenic | 30.0% | |
| ! | ATCACATGAATTTGAGATGA+TGG | - | tig0018782:202720-202739 | Msa1369470:CDS | 30.0% |
| ! | TCACATGAATTTGAGATGAT+GGG | - | tig0018782:202721-202740 | Msa1369470:CDS | 30.0% |
| AAATAACACTACGCAAAGAA+AGG | - | tig0018782:202975-202994 | Msa1369470:intron | 30.0% | |
| ! | TATGGAACAAAGTTTTCTGA+CGG | + | tig0018782:203193-203212 | None:intergenic | 30.0% |
| AGAAAAGAACTTCTCAAACT+AGG | + | tig0018782:203269-203288 | None:intergenic | 30.0% | |
| ! | TATTTTGCACAGAGATTATG+TGG | - | tig0018782:203385-203404 | Msa1369470:intron | 30.0% |
| ! | AATTTTGTTGGAAGACTTCT+GGG | - | tig0018782:203656-203675 | Msa1369470:intron | 30.0% |
| ! | CTAGAGGAAATTCTTTGAAA+CGG | - | tig0018782:203681-203700 | Msa1369470:intron | 30.0% |
| !! | TAGAGGAAATTCTTTGAAAC+GGG | - | tig0018782:203682-203701 | Msa1369470:intron | 30.0% |
| AAGATTTACATTACCTTGTC+TGG | + | tig0018782:203764-203783 | None:intergenic | 30.0% | |
| ! | ACATTTTGCAGTACTAAATC+GGG | + | tig0018782:203798-203817 | None:intergenic | 30.0% |
| ! | CACATTTTGCAGTACTAAAT+CGG | + | tig0018782:203799-203818 | None:intergenic | 30.0% |
| AACAACATTAGCAGGTAAAT+CGG | + | tig0018782:203974-203993 | None:intergenic | 30.0% | |
| TCTAAATGTCTACACATTCA+TGG | + | tig0018782:204155-204174 | None:intergenic | 30.0% | |
| TAGGCACTTCTAATATAGTT+GGG | + | tig0018782:204296-204315 | None:intergenic | 30.0% | |
| ATAGGCACTTCTAATATAGT+TGG | + | tig0018782:204297-204316 | None:intergenic | 30.0% | |
| GAATTTGATGTGGTAGATTA+AGG | + | tig0018782:204400-204419 | None:intergenic | 30.0% | |
| TATTTACCTCGAATTTGATG+TGG | + | tig0018782:204410-204429 | None:intergenic | 30.0% | |
| CATGTATAACAATATCTTCC+CGG | - | tig0018782:204478-204497 | Msa1369470:intron | 30.0% | |
| AGTCAGAAGATTTCATCAAA+AGG | - | tig0018782:204634-204653 | Msa1369470:intron | 30.0% | |
| GTATCTCCATTTAATTCTAG+TGG | - | tig0018782:204726-204745 | Msa1369470:CDS | 30.0% | |
| AATAGACTGACAATTATTGC+TGG | - | tig0018782:204869-204888 | Msa1369470:intron | 30.0% | |
| ! | TATTAAGAATAGGCTTGTTC+AGG | - | tig0018782:204985-205004 | Msa1369470:intron | 30.0% |
| AGTGTGGAATATACAAATGA+TGG | - | tig0018782:205074-205093 | Msa1369470:CDS | 30.0% | |
| GTGTGGAATATACAAATGAT+GGG | - | tig0018782:205075-205094 | Msa1369470:CDS | 30.0% | |
| !!! | CAAATGATGGGTTAAGTTTT+CGG | - | tig0018782:205087-205106 | Msa1369470:CDS | 30.0% |
| CATTTGTAATTCCTTCCAAA+AGG | - | tig0018782:205184-205203 | Msa1369470:five_prime_UTR | 30.0% | |
| ! | AATGCATTATACCTTTTGGA+AGG | + | tig0018782:205198-205217 | None:intergenic | 30.0% |
| ! | CTTCAATGCATTATACCTTT+TGG | + | tig0018782:205202-205221 | None:intergenic | 30.0% |
| AAGGTATAATGCATTGAAGT+TGG | - | tig0018782:205203-205222 | Msa1369470:five_prime_UTR | 30.0% | |
| TCTGAATTAGGTCTAATCTG+AGG | + | tig0018782:201667-201686 | None:intergenic | 35.0% | |
| CTGTCGATGATATCTGAATT+AGG | + | tig0018782:201679-201698 | None:intergenic | 35.0% | |
| CTAATTCAGATATCATCGAC+AGG | - | tig0018782:201677-201696 | Msa1369470:three_prime_UTR | 35.0% | |
| ATGAATGAATCAAGCAAGGA+AGG | + | tig0018782:201735-201754 | None:intergenic | 35.0% | |
| !! | TTGGGAAGGATTTTGATGAA+TGG | + | tig0018782:201822-201841 | None:intergenic | 35.0% |
| ! | TCTGGAATGTTATCCAATCA+AGG | - | tig0018782:201983-202002 | Msa1369470:CDS | 35.0% |
| AAAGTCAGCAAAACCTTGAT+TGG | + | tig0018782:201999-202018 | None:intergenic | 35.0% | |
| ATGGAATAATCTTCAACACG+AGG | - | tig0018782:202072-202091 | Msa1369470:CDS | 35.0% | |
| ! | GGATTGTTAGTCTAATACTC+TGG | - | tig0018782:202205-202224 | Msa1369470:intron | 35.0% |
| TTGGAGAGATTGATACTTGT+GGG | + | tig0018782:202256-202275 | None:intergenic | 35.0% | |
| ATTGGAGAGATTGATACTTG+TGG | + | tig0018782:202257-202276 | None:intergenic | 35.0% | |
| !!! | GACCTTGCTGTTAAGATTTT+AGG | - | tig0018782:202337-202356 | Msa1369470:intron | 35.0% |
| TCCCTAAAATCTTAACAGCA+AGG | + | tig0018782:202342-202361 | None:intergenic | 35.0% | |
| !! | TTAAGATTTTAGGGACTGAG+AGG | - | tig0018782:202347-202366 | Msa1369470:intron | 35.0% |
| !! | TAAGATTTTAGGGACTGAGA+GGG | - | tig0018782:202348-202367 | Msa1369470:intron | 35.0% |
| !!! | CATCCATTTTTTTCCTCCAA+TGG | - | tig0018782:202824-202843 | Msa1369470:CDS | 35.0% |
| ATAAGGACCTCAACATGTTA+AGG | + | tig0018782:202854-202873 | None:intergenic | 35.0% | |
| AACATGTTGAGGTCCTTATT+AGG | - | tig0018782:202855-202874 | Msa1369470:intron | 35.0% | |
| TTGAGGTCCTTATTAGGTAA+AGG | - | tig0018782:202861-202880 | Msa1369470:intron | 35.0% | |
| ! | CTGAATCATGAACATTTTCC+TGG | + | tig0018782:202934-202953 | None:intergenic | 35.0% |
| AATAGAAATTGCTAACGGGA+TGG | - | tig0018782:203084-203103 | Msa1369470:intron | 35.0% | |
| ! | AAAGTTTTCTGACGGTCATA+TGG | + | tig0018782:203185-203204 | None:intergenic | 35.0% |
| GTTTGATACGAAGTAGAGTA+AGG | + | tig0018782:203233-203252 | None:intergenic | 35.0% | |
| CTTCGTATCAAACTTCTTAG+TGG | - | tig0018782:203240-203259 | Msa1369470:CDS | 35.0% | |
| ! | CTTTTAACAGTGTATGAGCT+AGG | + | tig0018782:203454-203473 | None:intergenic | 35.0% |
| CTAGCTCATACACTGTTAAA+AGG | - | tig0018782:203452-203471 | Msa1369470:intron | 35.0% | |
| ! | TGTTAAAAGGATTTTGCGCT+TGG | - | tig0018782:203465-203484 | Msa1369470:intron | 35.0% |
| AAGAAAGATAAAGGACAGTG+TGG | + | tig0018782:203574-203593 | None:intergenic | 35.0% | |
| ! | CAATTTTGTTGGAAGACTTC+TGG | - | tig0018782:203655-203674 | Msa1369470:intron | 35.0% |
| CGTTTCAAAGAATTTCCTCT+AGG | + | tig0018782:203683-203702 | None:intergenic | 35.0% | |
| ! | CTTTAGGAAGAGAAATTGAG+AGG | - | tig0018782:203898-203917 | Msa1369470:intron | 35.0% |
| ! | AATCGGCTTCAATCAATATG+TGG | + | tig0018782:203957-203976 | None:intergenic | 35.0% |
| AGAAGAATTACTGAAACCTG+TGG | - | tig0018782:204026-204045 | Msa1369470:intron | 35.0% | |
| AAGATCAATACACGAAGTGA+AGG | + | tig0018782:204058-204077 | None:intergenic | 35.0% | |
| ! | ATTGATCTTTTCTCCGTGTT+AGG | - | tig0018782:204069-204088 | Msa1369470:intron | 35.0% |
| AATCTACCACATCAAATTCG+AGG | - | tig0018782:204401-204420 | Msa1369470:intron | 35.0% | |
| TGATTACTATTTGGAAGTCG+TGG | + | tig0018782:204536-204555 | None:intergenic | 35.0% | |
| GATGTCAATTTCTGATATGC+AGG | - | tig0018782:204608-204627 | Msa1369470:intron | 35.0% | |
| AGCAAAAACTGGTAGATGAA+AGG | - | tig0018782:204758-204777 | Msa1369470:CDS | 35.0% | |
| ! | TCCTCTTTTATCCTACATTC+TGG | - | tig0018782:204914-204933 | Msa1369470:CDS | 35.0% |
| TCCAGAATGTAGGATAAAAG+AGG | + | tig0018782:204918-204937 | None:intergenic | 35.0% | |
| TCCTACATTCTGGATAACAA+TGG | - | tig0018782:204924-204943 | Msa1369470:CDS | 35.0% | |
| ACCATTGTTATCCAGAATGT+AGG | + | tig0018782:204928-204947 | None:intergenic | 35.0% | |
| TACATTCTGGATAACAATGG+TGG | - | tig0018782:204927-204946 | Msa1369470:CDS | 35.0% | |
| ! | TCTAAATCGACCAAGTTTTG+TGG | - | tig0018782:205110-205129 | Msa1369470:CDS | 35.0% |
| !! | CTAAATCGACCAAGTTTTGT+GGG | - | tig0018782:205111-205130 | Msa1369470:CDS | 35.0% |
| AAAAAGAATCCAGTGAGACT+TGG | + | tig0018782:205148-205167 | None:intergenic | 35.0% | |
| GCATTGAAGTTGGAATATGA+AGG | - | tig0018782:205213-205232 | Msa1369470:five_prime_UTR | 35.0% | |
| AAAAAGTCCTCTCATGTATG+TGG | - | tig0018782:205245-205264 | Msa1369470:five_prime_UTR | 35.0% | |
| AAAAGTCCTCTCATGTATGT+GGG | - | tig0018782:205246-205265 | Msa1369470:five_prime_UTR | 35.0% | |
| ! | ACTCCTTTTGTGAACTCGAT+CGG | - | tig0018782:201557-201576 | Msa1369470:three_prime_UTR | 40.0% |
| CAATCAATCATCATGTCAGG+AGG | - | tig0018782:201595-201614 | Msa1369470:three_prime_UTR | 40.0% | |
| TTGAGGAAGACATAGGACTA+GGG | + | tig0018782:202042-202061 | None:intergenic | 40.0% | |
| TTTGAGGAAGACATAGGACT+AGG | + | tig0018782:202043-202062 | None:intergenic | 40.0% | |
| GAAGATTATTCCATCCAGTG+AGG | + | tig0018782:202066-202085 | None:intergenic | 40.0% | |
| TCTATACTTCGACAATGCTC+TGG | - | tig0018782:202184-202203 | Msa1369470:intron | 40.0% | |
| AACAGCAAGGTCTAAACTGA+CGG | + | tig0018782:202329-202348 | None:intergenic | 40.0% | |
| TCAACTCATAACATCCACCA+TGG | - | tig0018782:202499-202518 | Msa1369470:intron | 40.0% | |
| CCTCCATTGGAGGAAAAAAA+TGG | + | tig0018782:202830-202849 | None:intergenic | 40.0% | |
| !!! | CCATTTTTTTCCTCCAATGG+AGG | - | tig0018782:202827-202846 | Msa1369470:CDS | 40.0% |
| AACATGTTAAGGACCTCCAT+TGG | + | tig0018782:202843-202862 | None:intergenic | 40.0% | |
| ! | TCTACTAGAGCATCTCCAAT+GGG | + | tig0018782:202891-202910 | None:intergenic | 40.0% |
| ! | ATCTACTAGAGCATCTCCAA+TGG | + | tig0018782:202892-202911 | None:intergenic | 40.0% |
| GTATGTTTGTATGTATGGCC+AGG | - | tig0018782:202913-202932 | Msa1369470:intron | 40.0% | |
| AGTACTGTGAATGCAAAGAC+TGG | - | tig0018782:203114-203133 | Msa1369470:intron | 40.0% | |
| GTACTGTGAATGCAAAGACT+GGG | - | tig0018782:203115-203134 | Msa1369470:intron | 40.0% | |
| ACATTAGGGTATGTATCCAC+TGG | + | tig0018782:203496-203515 | None:intergenic | 40.0% | |
| ! | AGGGTGTTCATTAGAGGAAA+GGG | - | tig0018782:203725-203744 | Msa1369470:intron | 40.0% |
| TAGAGGAAAGGGGTCAATAA+AGG | - | tig0018782:203736-203755 | Msa1369470:intron | 40.0% | |
| GTCAATAAAGGATCCAGACA+AGG | - | tig0018782:203748-203767 | Msa1369470:intron | 40.0% | |
| AGGAAGAGAAATTGAGAGGA+AGG | - | tig0018782:203902-203921 | Msa1369470:intron | 40.0% | |
| GCTTCAATCAATATGTGGAG+TGG | + | tig0018782:203952-203971 | None:intergenic | 40.0% | |
| CTCATGTCAACAACATTAGC+AGG | + | tig0018782:203982-204001 | None:intergenic | 40.0% | |
| CTGCTAATGTTGTTGACATG+AGG | - | tig0018782:203980-203999 | Msa1369470:intron | 40.0% | |
| AGCATCATTTCAACACCAGA+TGG | - | tig0018782:204335-204354 | Msa1369470:intron | 40.0% | |
| !! | CAAGGAAAAGGTATTCCATC+TGG | + | tig0018782:204353-204372 | None:intergenic | 40.0% |
| AACGATAACATGGTTGTGTC+CGG | + | tig0018782:204500-204519 | None:intergenic | 40.0% | |
| AATTTGAGAGAAGAGAGTCC+TGG | - | tig0018782:204690-204709 | Msa1369470:CDS | 40.0% | |
| ! | GCGTCCTTGTTATCTTAGAT+TGG | - | tig0018782:204780-204799 | Msa1369470:intron | 40.0% |
| TGCAAGATATTCCCAGCAAT+GGG | + | tig0018782:204820-204839 | None:intergenic | 40.0% | |
| ! | ATTATTGCTGGCTAGCATTC+TGG | - | tig0018782:204881-204900 | Msa1369470:intron | 40.0% |
| ! | CAATAACTTGCGTAGAAGTG+TGG | - | tig0018782:205058-205077 | Msa1369470:CDS | 40.0% |
| TAGCTAGCTAGCAGCAGTTA+GGG | - | tig0018782:201528-201547 | Msa1369470:three_prime_UTR | 45.0% | |
| ! | CTCCTTTTGTGAACTCGATC+GGG | - | tig0018782:201558-201577 | Msa1369470:three_prime_UTR | 45.0% |
| TCAATCATCATGTCAGGAGG+AGG | - | tig0018782:201598-201617 | Msa1369470:three_prime_UTR | 45.0% | |
| CAATCATCATGTCAGGAGGA+GGG | - | tig0018782:201599-201618 | Msa1369470:three_prime_UTR | 45.0% | |
| GCATCACAGTCAGTATCTGT+CGG | - | tig0018782:201767-201786 | Msa1369470:three_prime_UTR | 45.0% | |
| TCAGTATCTGTCGGAGTTAC+TGG | - | tig0018782:201776-201795 | Msa1369470:three_prime_UTR | 45.0% | |
| ! | CTGGCAGAGTATCAGAAACT+TGG | - | tig0018782:201795-201814 | Msa1369470:three_prime_UTR | 45.0% |
| TTCAAGAGACGACTGGAGTT+GGG | + | tig0018782:201840-201859 | None:intergenic | 45.0% | |
| ATTCAAGAGACGACTGGAGT+TGG | + | tig0018782:201841-201860 | None:intergenic | 45.0% | |
| TCCAGTCGTCTCTTGAATCA+AGG | - | tig0018782:201843-201862 | Msa1369470:three_prime_UTR | 45.0% | |
| ACCTTGATTCAAGAGACGAC+TGG | + | tig0018782:201847-201866 | None:intergenic | 45.0% | |
| ACATAGGACTAGGGCTTCTA+TGG | + | tig0018782:202033-202052 | None:intergenic | 45.0% | |
| GTGAGGTTTGAGGAAGACAT+AGG | + | tig0018782:202049-202068 | None:intergenic | 45.0% | |
| ATGTCTTCCTCAAACCTCAC+TGG | - | tig0018782:202049-202068 | Msa1369470:CDS | 45.0% | |
| ATTCCATCCAGTGAGGTTTG+AGG | + | tig0018782:202059-202078 | None:intergenic | 45.0% | |
| !! | CTGACGGATTCATAGACTGT+AGG | + | tig0018782:202313-202332 | None:intergenic | 45.0% |
| ATGTTAAGGACCTCCATTGG+AGG | + | tig0018782:202840-202859 | None:intergenic | 45.0% | |
| TGGAGGTCCTTAACATGTTG+AGG | - | tig0018782:202844-202863 | Msa1369470:intron | 45.0% | |
| GGGGAGTCCTTTACCTAATA+AGG | + | tig0018782:202871-202890 | None:intergenic | 45.0% | |
| TTAGGTAAAGGACTCCCCAT+TGG | - | tig0018782:202873-202892 | Msa1369470:intron | 45.0% | |
| ! | CTACTAGAGCATCTCCAATG+GGG | + | tig0018782:202890-202909 | None:intergenic | 45.0% |
| AAATTGCTAACGGGATGGTC+AGG | - | tig0018782:203089-203108 | Msa1369470:intron | 45.0% | |
| CAGAGATTATGTGGAACTCC+TGG | - | tig0018782:203394-203413 | Msa1369470:intron | 45.0% | |
| TGGAACTCCTGGAATGACAA+TGG | - | tig0018782:203405-203424 | Msa1369470:intron | 45.0% | |
| CTCCTGGAATGACAATGGAT+TGG | - | tig0018782:203410-203429 | Msa1369470:intron | 45.0% | |
| TGCCAATCCATTGTCATTCC+AGG | + | tig0018782:203415-203434 | None:intergenic | 45.0% | |
| !! | GGAATGACAATGGATTGGCA+AGG | - | tig0018782:203415-203434 | Msa1369470:intron | 45.0% |
| TTTGCGCTTGGAAATTCCAG+TGG | - | tig0018782:203477-203496 | Msa1369470:intron | 45.0% | |
| AAACGGGTAGAAGCTACTAC+AGG | - | tig0018782:203698-203717 | Msa1369470:intron | 45.0% | |
| TAGAAGCTACTACAGGTTGC+AGG | - | tig0018782:203705-203724 | Msa1369470:intron | 45.0% | |
| AGAAGCTACTACAGGTTGCA+GGG | - | tig0018782:203706-203725 | Msa1369470:intron | 45.0% | |
| ! | CAGGGTGTTCATTAGAGGAA+AGG | - | tig0018782:203724-203743 | Msa1369470:intron | 45.0% |
| GGGTGTTCATTAGAGGAAAG+GGG | - | tig0018782:203726-203745 | Msa1369470:intron | 45.0% | |
| AGAAATTGAGAGGAAGGCCA+GGG | - | tig0018782:203908-203927 | Msa1369470:intron | 45.0% | |
| TCATTGAGATGCTCATACCC+TGG | + | tig0018782:203928-203947 | None:intergenic | 45.0% | |
| ATGTTGTTGACATGAGGCTC+AGG | - | tig0018782:203986-204005 | Msa1369470:intron | 45.0% | |
| GAAGTGAAGGAACTTACCAC+AGG | + | tig0018782:204045-204064 | None:intergenic | 45.0% | |
| ACGATAACATGGTTGTGTCC+GGG | + | tig0018782:204499-204518 | None:intergenic | 45.0% | |
| TCATCAAAAGGCAGCAGTTG+CGG | - | tig0018782:204646-204665 | Msa1369470:intron | 45.0% | |
| AATGGAGATACACTACCGCT+TGG | + | tig0018782:204717-204736 | None:intergenic | 45.0% | |
| GGAATGAAGCGAGCAAAAAC+TGG | - | tig0018782:204747-204766 | Msa1369470:CDS | 45.0% | |
| CTGCAAGATATTCCCAGCAA+TGG | + | tig0018782:204821-204840 | None:intergenic | 45.0% | |
| CGTTACATGCCCACAAAACT+TGG | + | tig0018782:205123-205142 | None:intergenic | 45.0% | |
| CAAATGCCCACATACATGAG+AGG | + | tig0018782:205255-205274 | None:intergenic | 45.0% | |
| CTAACTGCTGCTAGCTAGCT+AGG | + | tig0018782:201529-201548 | None:intergenic | 50.0% | |
| CTAGCTAGCTAGCAGCAGTT+AGG | - | tig0018782:201527-201546 | Msa1369470:three_prime_UTR | 50.0% | |
| CACCCGATCGAGTTCACAAA+AGG | + | tig0018782:201563-201582 | None:intergenic | 50.0% | |
| ! | CTTTTGTGAACTCGATCGGG+TGG | - | tig0018782:201561-201580 | Msa1369470:three_prime_UTR | 50.0% |
| CTCACAGGGGAAGAGAAGTT+CGG | + | tig0018782:201634-201653 | None:intergenic | 50.0% | |
| CTTCCTCAAACCTCACTGGA+TGG | - | tig0018782:202053-202072 | Msa1369470:CDS | 50.0% | |
| GTTGCAGAGAGTGATACCTC+AGG | - | tig0018782:202449-202468 | Msa1369470:intron | 50.0% | |
| ATACCTCAGGCGCTAAAGTG+AGG | - | tig0018782:202462-202481 | Msa1369470:intron | 50.0% | |
| TACCTCAGGCGCTAAAGTGA+GGG | - | tig0018782:202463-202482 | Msa1369470:intron | 50.0% | |
| GTGTATGAGCTAGGACTTGC+AGG | + | tig0018782:203445-203464 | None:intergenic | 50.0% | |
| ! | GGTTGCAGGGTGTTCATTAG+AGG | - | tig0018782:203719-203738 | Msa1369470:intron | 50.0% |
| GAGAAATTGAGAGGAAGGCC+AGG | - | tig0018782:203907-203926 | Msa1369470:intron | 50.0% | |
| CATCAAAAGGCAGCAGTTGC+GGG | - | tig0018782:204647-204666 | Msa1369470:intron | 50.0% | |
| TTTGTCCAGCAACCCATTGC+TGG | - | tig0018782:204805-204824 | Msa1369470:intron | 50.0% | |
| TTGTCCAGCAACCCATTGCT+GGG | - | tig0018782:204806-204825 | Msa1369470:intron | 50.0% | |
| !! | TATTCCCAGCAATGGGTTGC+TGG | + | tig0018782:204813-204832 | None:intergenic | 50.0% |
| ! | ATTGCTGGCTAGCATTCTGG+TGG | - | tig0018782:204884-204903 | Msa1369470:intron | 50.0% |
| TGTAACGTGCCAAGTCTCAC+TGG | - | tig0018782:205136-205155 | Msa1369470:exon | 50.0% | |
| CTAGCTAGCAGCAGTTAGGG+AGG | - | tig0018782:201531-201550 | Msa1369470:three_prime_UTR | 55.0% | |
| AGGTGAAGCAGCTCTCACAG+GGG | + | tig0018782:201647-201666 | None:intergenic | 55.0% | |
| GAGGTGAAGCAGCTCTCACA+GGG | + | tig0018782:201648-201667 | None:intergenic | 55.0% | |
| TGAGGTGAAGCAGCTCTCAC+AGG | + | tig0018782:201649-201668 | None:intergenic | 55.0% | |
| AGAGACGACTGGAGTTGGGA+AGG | + | tig0018782:201836-201855 | None:intergenic | 55.0% | |
| AACCCTCACTTTAGCGCCTG+AGG | + | tig0018782:202468-202487 | None:intergenic | 55.0% | |
| !! | GGAAGACTTCTGGGACCTAG+AGG | - | tig0018782:203665-203684 | Msa1369470:intron | 55.0% |
| TGTTGACATGAGGCTCAGGC+AGG | - | tig0018782:203990-204009 | Msa1369470:intron | 55.0% | |
| TCTCCGTGTTAGGCTGTGTG+AGG | - | tig0018782:204079-204098 | Msa1369470:intron | 55.0% | |
| CCACCTCACACAGCCTAACA+CGG | + | tig0018782:204085-204104 | None:intergenic | 55.0% | |
| AAGGCAGCAGTTGCGGGAAT+TGG | - | tig0018782:204653-204672 | Msa1369470:intron | 55.0% | |
| GAAGAGAGTCCTGGACCAAG+CGG | - | tig0018782:204699-204718 | Msa1369470:CDS | 55.0% | |
| GATACACTACCGCTTGGTCC+AGG | + | tig0018782:204711-204730 | None:intergenic | 55.0% | |
| CCGTGTTAGGCTGTGTGAGG+TGG | - | tig0018782:204082-204101 | Msa1369470:intron | 60.0% | |
| CATGAGGCTCAGGCAGGCTC+AGG | - | tig0018782:203996-204015 | Msa1369470:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018782 | gene | 201443 | 205308 | 201443 | ID=Msa1369470;Name=Msa1369470 |
| tig0018782 | mRNA | 201443 | 205308 | 201443 | ID=Msa1369470-mRNA-1;Parent=Msa1369470;Name=Msa1369470-mRNA-1;_AED=0.15;_eAED=0.15;_QI=164|1|1|1|1|1|7|532|276 |
| tig0018782 | exon | 201443 | 202121 | 201443 | ID=Msa1369470-mRNA-1:exon:1121;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 202704 | 202847 | 202704 | ID=Msa1369470-mRNA-1:exon:1120;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 202982 | 203098 | 202982 | ID=Msa1369470-mRNA-1:exon:1119;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 203238 | 203354 | 203238 | ID=Msa1369470-mRNA-1:exon:1118;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 204658 | 204782 | 204658 | ID=Msa1369470-mRNA-1:exon:1117;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 204887 | 204975 | 204887 | ID=Msa1369470-mRNA-1:exon:1116;Parent=Msa1369470-mRNA-1 |
| tig0018782 | exon | 205053 | 205308 | 205053 | ID=Msa1369470-mRNA-1:exon:1115;Parent=Msa1369470-mRNA-1 |
| tig0018782 | five_prime_UTR | 205145 | 205308 | 205145 | ID=Msa1369470-mRNA-1:five_prime_utr;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 205053 | 205144 | 205053 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 204887 | 204975 | 204887 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 204658 | 204782 | 204658 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 203238 | 203354 | 203238 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 202982 | 203098 | 202982 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 202704 | 202847 | 202704 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | CDS | 201975 | 202121 | 201975 | ID=Msa1369470-mRNA-1:cds;Parent=Msa1369470-mRNA-1 |
| tig0018782 | three_prime_UTR | 201443 | 201974 | 201443 | ID=Msa1369470-mRNA-1:three_prime_utr;Parent=Msa1369470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
