AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236690 MtrunA17_Chr8g0346891 92.123 914 68 2 1 911 1 913 0.0 1665
Msa1236690 MtrunA17_Chr8g0346911 93.724 239 12 2 920 1158 1 236 5.47e-150 448
Msa1236690 MtrunA17_Chr8g0388331 62.500 192 72 0 964 1155 19 210 3.72e-76 250
Msa1236690 MtrunA17_Chr4g0055421 56.923 195 84 0 961 1155 16 210 2.07e-69 231
Msa1236690 MtrunA17_Chr1g0151621 57.216 194 83 0 960 1153 54 247 1.11e-67 228
Msa1236690 MtrunA17_Chr3g0102821 54.146 205 92 1 954 1156 22 226 1.62e-67 226
Msa1236690 MtrunA17_Chr4g0076551 55.208 192 86 0 965 1156 36 227 2.63e-67 226
Msa1236690 MtrunA17_Chr5g0446931 55.102 196 88 0 961 1156 31 226 1.49e-66 224
Msa1236690 MtrunA17_Chr2g0290771 54.645 183 83 0 973 1155 8 190 2.75e-63 213
Msa1236690 MtrunA17_Chr8g0341941 52.083 192 92 0 966 1157 66 257 4.20e-57 198
Msa1236690 MtrunA17_Chr2g0290781 49.741 193 97 0 966 1158 41 233 8.74e-57 196
Msa1236690 MtrunA17_Chr2g0290751 55.357 168 75 0 970 1137 43 210 2.11e-55 191
Msa1236690 MtrunA17_Chr2g0290761 54.762 168 76 0 970 1137 43 210 4.50e-54 187
Msa1236690 MtrunA17_Chr3g0126801 72.000 100 28 0 1057 1156 6 105 2.40e-42 150
Msa1236690 MtrunA17_Chr4g0063121 41.111 180 86 1 976 1155 8 167 2.07e-39 145
Msa1236690 MtrunA17_Chr3g0126811 65.000 100 35 0 961 1060 17 116 1.21e-35 131
Msa1236690 MtrunA17_Chr5g0399921 53.191 94 44 0 961 1054 15 108 4.09e-25 101
Msa1236690 MtrunA17_Chr8g0388321 41.463 123 47 2 961 1074 58 164 2.34e-23 98.2
Msa1236690 MtrunA17_Chr8g0388311 52.439 82 39 0 1077 1158 1 82 1.88e-22 92.8
Msa1236690 MtrunA17_Chr5g0399931 55.738 61 27 0 1077 1137 1 61 1.40e-14 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236690 AT5G24270.4 60.092 218 81 1 938 1155 3 214 1.85e-81 265
Msa1236690 AT5G24270.1 60.092 218 81 1 938 1155 3 214 1.85e-81 265
Msa1236690 AT5G24270.2 60.092 218 81 1 938 1155 3 214 1.85e-81 265
Msa1236690 AT5G24270.5 63.441 186 68 0 970 1155 4 189 2.36e-75 248
Msa1236690 AT1G64480.2 60.000 195 78 0 961 1155 20 214 2.65e-71 237
Msa1236690 AT1G64480.3 60.000 195 78 0 961 1155 20 214 2.65e-71 237
Msa1236690 AT1G64480.1 60.000 195 78 0 961 1155 20 214 2.65e-71 237
Msa1236690 AT4G33000.2 58.421 190 79 0 966 1155 57 246 1.02e-67 228
Msa1236690 AT4G33000.1 58.421 190 79 0 966 1155 67 256 2.31e-67 228
Msa1236690 AT5G47100.1 56.316 190 83 0 966 1155 21 210 1.88e-66 223
Msa1236690 AT4G17615.4 55.263 190 85 0 966 1155 21 210 3.19e-66 223
Msa1236690 AT4G17615.1 55.263 190 85 0 966 1155 21 210 3.19e-66 223
Msa1236690 AT4G17615.5 55.263 190 85 0 966 1155 21 210 3.19e-66 223
Msa1236690 AT4G26570.1 54.167 192 88 0 965 1156 35 226 7.50e-66 222
Msa1236690 AT5G24270.3 62.733 161 60 0 995 1155 7 167 1.51e-65 219
Msa1236690 AT5G55990.1 54.167 192 88 0 965 1156 35 226 1.62e-64 218
Msa1236690 AT5G55990.2 54.167 192 88 0 965 1156 35 226 1.62e-64 218
Msa1236690 AT4G26570.2 53.061 196 88 1 965 1156 35 230 6.96e-64 216
Msa1236690 AT1G64480.4 60.452 177 70 0 961 1137 20 196 7.07e-64 215
Msa1236690 AT3G61780.1 35.329 501 276 17 21 495 23 501 4.77e-60 225
Msa1236690 AT3G61780.1 51.802 222 99 4 694 911 626 843 1.74e-56 214
Msa1236690 AT4G17615.3 55.682 176 78 0 966 1141 21 196 1.60e-59 205
Msa1236690 AT4G01420.1 51.064 188 92 0 961 1148 15 202 2.35e-57 197
Msa1236690 AT4G16350.2 50.777 193 91 1 966 1158 34 222 9.53e-56 193
Msa1236690 AT4G16350.1 50.777 193 91 1 966 1158 34 222 9.53e-56 193
Msa1236690 AT4G01420.2 51.412 177 86 0 961 1137 15 191 3.90e-54 187
Msa1236690 AT4G17615.2 53.797 158 73 0 998 1155 11 168 1.09e-53 185
Msa1236690 AT4G26560.1 45.789 190 90 1 980 1156 25 214 3.52e-50 177
Msa1236690 AT5G28400.1 33.408 446 203 16 117 495 44 462 1.38e-45 179
Msa1236690 AT5G28400.1 40.090 222 91 6 694 911 550 733 4.00e-27 120
Msa1236690 AT4G33000.5 54.861 144 65 0 962 1105 53 196 4.77e-44 159
Msa1236690 AT5G47100.2 52.113 142 68 0 966 1107 21 162 9.31e-44 157
Msa1236690 AT4G33000.4 56.115 139 61 0 962 1100 53 191 5.90e-43 155
Msa1236690 AT4G33000.6 56.115 139 61 0 962 1100 53 191 5.90e-43 155
Msa1236690 AT5G28320.1 32.447 376 173 14 156 495 112 442 8.06e-34 141
Msa1236690 AT5G28320.1 35.758 165 50 4 751 911 559 671 4.92e-17 87.4
Msa1236690 AT4G33000.3 55.435 92 41 0 962 1053 53 144 1.04e-23 99.0

Find 231 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGAAAGTTTCAAATTT+TGG 0.094958 8_2:+15834259 Msa1236690:CDS
TTCCTGATTTGTTTAATTAT+TGG 0.140144 8_2:-15835979 None:intergenic
TATGACTTCACTCTCATTAT+AGG 0.163143 8_2:-15835251 None:intergenic
GGATTGATTCCGAAGCTTTC+GGG 0.188701 8_2:+15834797 Msa1236690:CDS
TAGAATCTTCACTGGCATTT+TGG 0.199526 8_2:-15835786 None:intergenic
CAGAATCTTCACTAGGATTT+AGG 0.204385 8_2:-15836041 None:intergenic
CTTCCTTCAACAACAGTCTT+TGG 0.207941 8_2:-15837209 None:intergenic
ATGAAAGAGTGTTTAGAAAT+TGG 0.214120 8_2:-15834025 None:intergenic
TGAAATAGAGGATAAGATTT+TGG 0.218514 8_2:+15834634 Msa1236690:CDS
TAAATATGAAATCAGATTCT+AGG 0.223247 8_2:+15836013 Msa1236690:CDS
TTGTCTGCTTGAGGAGCTTT+AGG 0.234896 8_2:-15838933 None:intergenic
TCGTCGTTCATCAAATAAAA+TGG 0.238549 8_2:-15836453 None:intergenic
GTTAGAAATGTATTTCTTAC+TGG 0.252316 8_2:+15839836 Msa1236690:three_prime_UTR
CGCCTTAATGGTCAGAATTC+AGG 0.255806 8_2:-15840035 None:intergenic
GTTCGTGATGATAGAGAAAT+TGG 0.263066 8_2:+15835415 Msa1236690:CDS
CTTGTAGTTCAGAATTCTTC+TGG 0.264665 8_2:+15835094 Msa1236690:CDS
TACTATCACCATTAACTTCA+TGG 0.265220 8_2:-15836167 None:intergenic
CATTATATTAGACGCCTTAA+TGG 0.270604 8_2:-15840047 None:intergenic
TGTTGAATAAATTGGAGAAT+TGG 0.274152 8_2:+15834474 Msa1236690:CDS
TTTATCTAGGAATTCATTTA+GGG 0.278659 8_2:-15837051 None:intergenic
CTCCTCTGATAGACTTGCTT+TGG 0.280462 8_2:-15835935 None:intergenic
AAAATCGTTTAACTCTTATA+AGG 0.282980 8_2:+15833910 None:intergenic
AAATGGGTATGAAATAGTTT+TGG 0.283795 8_2:-15834150 None:intergenic
TTTCTGGAAAGACAGAAAAT+TGG 0.287623 8_2:+15836202 Msa1236690:CDS
TCCATTTAATGTGTCACTTC+TGG 0.291514 8_2:-15835743 None:intergenic
CTTCAGAACAAGAATTATTA+AGG 0.292998 8_2:-15837634 None:intergenic
TCCTTCCCATCCTTCTTCAC+TGG 0.299460 8_2:-15837107 None:intergenic
TAATTATAGGCTCAACTTCA+TGG 0.305732 8_2:-15836239 None:intergenic
TTCTGCGTTCAGCATAAAAC+TGG 0.307181 8_2:-15839649 None:intergenic
GTCATAAATGAGCCATTAAT+AGG 0.315826 8_2:-15835511 None:intergenic
TCCAGAAGTGACACATTAAA+TGG 0.321389 8_2:+15835742 Msa1236690:CDS
TTCTCTAGTTAGTAAGGATA+TGG 0.326970 8_2:+15835201 Msa1236690:CDS
GGAGATGGTGTTGATGGTTT+TGG 0.329380 8_2:+15839257 Msa1236690:CDS
TAAATTCGCCAAACTCTATA+TGG 0.330475 8_2:-15838887 None:intergenic
ACTTCAGACCATGAAGTTAA+TGG 0.337289 8_2:+15836159 Msa1236690:CDS
CCTTCCCATCCTTCTTCACT+GGG 0.340053 8_2:-15837106 None:intergenic
AATATTGAAAATATTGATTA+CGG 0.341308 8_2:+15836564 Msa1236690:CDS
GGGATTGATTCCGAAGCTTT+CGG 0.342872 8_2:+15834796 Msa1236690:CDS
GACCGTCAAGTTGATGGCTT+TGG 0.343100 8_2:+15835910 Msa1236690:CDS
GAGAATGGATATGGACTATA+AGG 0.350527 8_2:+15835123 Msa1236690:CDS
AATGAGTGCTCGAAGGATTC+TGG 0.355831 8_2:+15835841 Msa1236690:CDS
GAAAATCCTGATGCAAAATC+TGG 0.356907 8_2:+15835619 Msa1236690:CDS
GTTATTTCGTGTTGGTGATA+AGG 0.356931 8_2:+15834871 Msa1236690:CDS
AGCAAAACAACGGATAATAA+TGG 0.363935 8_2:+15835328 Msa1236690:CDS
TCTACGGAGACACCGGTTAT+AGG 0.365607 8_2:+15834998 Msa1236690:CDS
GCTTTAGACCGTCAAGTTGA+TGG 0.371836 8_2:+15835904 Msa1236690:CDS
GTTGAATAAATTGGAGAATT+GGG 0.374416 8_2:+15834475 Msa1236690:CDS
GTGGCTAAGTTTATTGTTCA+AGG 0.375216 8_2:+15834719 Msa1236690:CDS
GTAAAGGTTGATGGTTCAAT+AGG 0.379833 8_2:+15837164 Msa1236690:CDS
TCTTCAAAAGTAAAGGTTGA+TGG 0.380593 8_2:+15837155 Msa1236690:CDS
TTGATGTCACCGATCTTTGT+TGG 0.384210 8_2:-15836087 None:intergenic
AACATCGATAAGTGTATGTT+TGG 0.386311 8_2:-15833937 None:intergenic
TATTTGAATGGAGCCATTCA+TGG 0.390352 8_2:-15836545 None:intergenic
ACTGTTTATCAAGATTCATT+TGG 0.394359 8_2:+15834554 Msa1236690:CDS
TGGTGAAGTGAGAATGGATA+TGG 0.394713 8_2:+15835114 Msa1236690:CDS
AGCCAATAATTAAACAAATC+AGG 0.395596 8_2:+15835977 Msa1236690:CDS
CAGTGAATTGCGACGGTTGG+TGG 0.399835 8_2:-15834297 None:intergenic
TCGTGGATTTATCGTGCAAC+CGG 0.402086 8_2:+15834775 Msa1236690:CDS
ATTCATTTGGTGGTGTTAAG+AGG 0.406479 8_2:+15834567 Msa1236690:CDS
TGATGTCACCGATCTTTGTT+GGG 0.407949 8_2:-15836086 None:intergenic
TAGGAATTCATTTAGGGCCT+CGG 0.408048 8_2:-15837045 None:intergenic
AACAACGGCCATATAGAGTT+TGG 0.408503 8_2:+15838879 Msa1236690:CDS
GGCGAATTTATCAGATCCTT+GGG 0.409624 8_2:+15838900 Msa1236690:CDS
GAAAATATTGATTACGGAGC+AGG 0.410754 8_2:+15836570 Msa1236690:CDS
TTATATGACTTGAGGCATAC+TGG 0.414238 8_2:+15839121 Msa1236690:CDS
TTATTGTCTTCTCTGTCCTT+CGG 0.415153 8_2:-15835475 None:intergenic
TTCTGGTACGGAACCTGTAT+TGG 0.415192 8_2:+15835858 Msa1236690:CDS
GATCAGAAGGATAAGAAATT+CGG 0.417448 8_2:+15836063 Msa1236690:CDS
GAATTGGGTTGATAAGTATA+AGG 0.418103 8_2:+15834490 Msa1236690:CDS
TGGCGAATTTATCAGATCCT+TGG 0.418944 8_2:+15838899 Msa1236690:CDS
GTTGAAGGAGATGGTGTTGA+TGG 0.420723 8_2:+15839251 Msa1236690:intron
TGTTCAAGGTGAGGAGGAGA+AGG 0.421697 8_2:+15834733 Msa1236690:CDS
TGGAGGCTAAGAAGCTAGCT+AGG 0.424554 8_2:+15834654 Msa1236690:CDS
GATAAAGATGCTTTCTTCAA+AGG 0.426692 8_2:+15836477 Msa1236690:CDS
GTTTGATGAATATAAAGCTC+TGG 0.429261 8_2:-15834183 None:intergenic
GTCATGTTCTTGAGTAATGA+TGG 0.435791 8_2:-15839504 None:intergenic
AGGGATTTATAATAAATTTG+AGG 0.437402 8_2:-15839973 None:intergenic
AGAAACAGAAGAAGGGTCAT+TGG 0.438257 8_2:-15834366 None:intergenic
AAACTACGAGTGTGATTCTT+CGG 0.440928 8_2:-15839673 None:intergenic
AAGGATCATACGGTCTGTTA+AGG 0.442534 8_2:+15835561 Msa1236690:CDS
AAACTCGAATCAAAGCTATA+TGG 0.443483 8_2:-15839773 None:intergenic
ATCTCAGTTGGTATATCTAA+AGG 0.444572 8_2:-15836321 None:intergenic
CTTATCTTTGCCAACTTCAC+AGG 0.446985 8_2:-15837582 None:intergenic
GGTTCGAGAAATCAGAGAAA+TGG 0.455075 8_2:+15835144 Msa1236690:CDS
AACTTTCTCACCTCCATGAA+TGG 0.455193 8_2:+15836532 Msa1236690:CDS
GGCACGGGAAATTGAAGGCG+GGG 0.455668 8_2:+15835174 Msa1236690:CDS
AGTTAGTCATTTCGAGCTGT+TGG 0.455730 8_2:+15839743 Msa1236690:three_prime_UTR
AATCCAAAGACTGTTGTTGA+AGG 0.455993 8_2:+15837206 Msa1236690:CDS
GACCTGAATTCTGACCATTA+AGG 0.458985 8_2:+15840033 Msa1236690:three_prime_UTR
AAAGACTCTGGTGTTGAACC+TGG 0.462159 8_2:+15836108 Msa1236690:CDS
GAAATGGATGACAGTGTGAT+TGG 0.462283 8_2:+15835223 Msa1236690:CDS
GTTTATCAAGATTCATTTGG+TGG 0.462608 8_2:+15834557 Msa1236690:CDS
CCAACTGAGATGGAATCAAT+TGG 0.467007 8_2:+15836333 Msa1236690:CDS
GGAGATTCGGTATACAGAAA+TGG 0.467191 8_2:+15834892 Msa1236690:CDS
TTTAAAACTTACATTAGATA+AGG 0.469690 8_2:-15839531 None:intergenic
GGAGAAAGAGATGTTGATGA+AGG 0.470521 8_2:+15834952 Msa1236690:CDS
AGTTAGTAAGGATATGGAAA+TGG 0.471596 8_2:+15835207 Msa1236690:CDS
TTCTTCTGGTGAAGTGAGAA+TGG 0.472021 8_2:+15835108 Msa1236690:CDS
CAGTGAAGATTCTAATCAAA+AGG 0.476148 8_2:+15835795 Msa1236690:CDS
TTAACAGACCGTATGATCCT+TGG 0.476893 8_2:-15835559 None:intergenic
TTTGATGAATATAAAGCTCT+GGG 0.478502 8_2:-15834182 None:intergenic
GAAACAGAAGAAGGGTCATT+GGG 0.478730 8_2:-15834365 None:intergenic
AGGAATTCATTTAGGGCCTC+GGG 0.479191 8_2:-15837044 None:intergenic
ATCAGCAGATGAAGAATTTG+TGG 0.485207 8_2:+15840086 Msa1236690:three_prime_UTR
TTCATTTGGTGGTGTTAAGA+GGG 0.485782 8_2:+15834568 Msa1236690:CDS
CGATTCATCTTCAAAAGTAA+AGG 0.486731 8_2:+15837148 Msa1236690:CDS
CGTGGATTTATCGTGCAACC+GGG 0.486754 8_2:+15834776 Msa1236690:CDS
GCAAAATCTGGAATTGAACT+TGG 0.491961 8_2:+15835631 Msa1236690:CDS
GAGAAATGGCTAGGCGGGCA+CGG 0.494474 8_2:+15835158 Msa1236690:CDS
GAGAGAGGTGGAAATCTTGA+AGG 0.495718 8_2:+15838243 Msa1236690:CDS
GGATCGTTCTCTAGTTAGTA+AGG 0.496795 8_2:+15835195 Msa1236690:CDS
AGGCGGGCACGGGAAATTGA+AGG 0.498159 8_2:+15835169 Msa1236690:CDS
TCAATTGGAGTTGGTGAAGA+TGG 0.498351 8_2:+15836348 Msa1236690:CDS
ATTCTTCATCTGCTGATACA+TGG 0.501689 8_2:-15840080 None:intergenic
AAATTTGAACCCAGTGAAGA+AGG 0.502258 8_2:+15837097 Msa1236690:CDS
GCGAAACCTCTTTGTGGATA+GGG 0.504445 8_2:+15838495 Msa1236690:CDS
GTGTTGGTGATAAGGAGATT+CGG 0.506663 8_2:+15834879 Msa1236690:CDS
TGAAGTTATTCATGAATCTA+CGG 0.506906 8_2:+15834982 Msa1236690:CDS
ATAATTAAGAAAATTAGAGC+TGG 0.508482 8_2:+15836255 Msa1236690:CDS
AGTTGGTGGAAATGAAATAG+AGG 0.508615 8_2:+15834622 Msa1236690:CDS
TGATAGAGAAATTGGTAAAG+AGG 0.511552 8_2:+15835423 Msa1236690:CDS
TGGAAAGACAGAAAATTGGC+TGG 0.512086 8_2:+15836206 Msa1236690:CDS
AAAAGTAGCAGAAAATATCA+TGG 0.516359 8_2:+15837553 Msa1236690:CDS
AGAAATGGCTAGGCGGGCAC+GGG 0.517232 8_2:+15835159 Msa1236690:CDS
AGCTGTTCCTTATCCAACTC+CGG 0.518530 8_2:-15835031 None:intergenic
AATCAGAGAAATGGCTAGGC+GGG 0.518930 8_2:+15835153 Msa1236690:CDS
GTTCAAGGTGAGGAGGAGAA+GGG 0.519648 8_2:+15834734 Msa1236690:CDS
TTTGGTTCTCTCTGATGATG+TGG 0.519964 8_2:+15839290 Msa1236690:CDS
ATCACGAACAATCTCATGCT+TGG 0.521101 8_2:-15835401 None:intergenic
GAAGAAAATTATGATGAGGA+AGG 0.524338 8_2:+15834916 Msa1236690:CDS
AAACAAGCGAAACCTCTTTG+TGG 0.525654 8_2:+15838489 Msa1236690:CDS
CCAATTGATTCCATCTCAGT+TGG 0.527142 8_2:-15836333 None:intergenic
AACCAAAGCCATCAACTTGA+CGG 0.527200 8_2:-15835912 None:intergenic
CATATTGAAGAAATTGATGA+TGG 0.528232 8_2:+15834395 Msa1236690:CDS
TTTCTAGAAACAGACACAAA+AGG 0.529093 8_2:+15839432 Msa1236690:CDS
AAGATTCTAATCAAAAGGAA+AGG 0.529775 8_2:+15835800 Msa1236690:CDS
GAAGAATGGAGTGAATATGT+TGG 0.530325 8_2:+15839474 Msa1236690:CDS
TTGAACCCAGTGAAGAAGGA+TGG 0.531615 8_2:+15837101 Msa1236690:CDS
AGTGAATTGCGACGGTTGGT+GGG 0.533971 8_2:-15834296 None:intergenic
TCTTCACTAGGATTTAGGTC+AGG 0.537081 8_2:-15836036 None:intergenic
GTAGCAGAAAATATCATGGA+TGG 0.537395 8_2:+15837557 Msa1236690:CDS
TTGACGGTCTAAAGCGGTCT+CGG 0.541663 8_2:-15835896 None:intergenic
CAAGCTTCTTCATGATCACC+AGG 0.544082 8_2:+15834325 Msa1236690:CDS
TGATTACTAGAAACAGAAGA+AGG 0.545033 8_2:-15834374 None:intergenic
TTTAGATATACCAACTGAGA+TGG 0.554996 8_2:+15836323 Msa1236690:CDS
GATTGATTCCGAAGCTTTCG+GGG 0.555002 8_2:+15834798 Msa1236690:CDS
AGCGAAACCTCTTTGTGGAT+AGG 0.555448 8_2:+15838494 Msa1236690:CDS
AACATGATCTTTCTGTGATG+CGG 0.557680 8_2:+15840000 Msa1236690:three_prime_UTR
CCCAGTGAAGAAGGATGGGA+AGG 0.558091 8_2:+15837106 Msa1236690:CDS
ACGGTCTGTTAAGGAAGCTA+AGG 0.558154 8_2:+15835570 Msa1236690:CDS
CAAAATCTGGAATTGAACTT+GGG 0.558509 8_2:+15835632 Msa1236690:CDS
CATTTAGATTATATGACTTG+AGG 0.558619 8_2:+15839113 Msa1236690:CDS
GAATGTGAATTCTACTTACC+TGG 0.559762 8_2:-15834343 None:intergenic
TAGTGAAGATTCTGATCAGA+AGG 0.560531 8_2:+15836050 Msa1236690:CDS
AAATGGATGACAGTGTGATT+GGG 0.560569 8_2:+15835224 Msa1236690:CDS
GGGCACGGGAAATTGAAGGC+GGG 0.561004 8_2:+15835173 Msa1236690:CDS
GAGGAAGGCAAAAGCTAGGA+AGG 0.562096 8_2:+15834931 Msa1236690:CDS
GGAGGCTAAGAAGCTAGCTA+GGG 0.562101 8_2:+15834655 Msa1236690:CDS
CGGGCACGGGAAATTGAAGG+CGG 0.562502 8_2:+15835172 Msa1236690:CDS
TAAGTTTATTGTTCAAGGTG+AGG 0.564177 8_2:+15834724 Msa1236690:CDS
GTGAAGAAGTTATTTCGTGT+TGG 0.565361 8_2:+15834863 Msa1236690:CDS
ATGGATGGATCCTGTGAAGT+TGG 0.567272 8_2:+15837572 Msa1236690:CDS
ATCGGTGACATCAAAGACTC+TGG 0.567494 8_2:+15836096 Msa1236690:CDS
CCTCAGTGAATTGCGACGGT+TGG 0.567571 8_2:-15834300 None:intergenic
TCAGCAGATGAAGAATTTGT+GGG 0.568897 8_2:+15840087 Msa1236690:three_prime_UTR
AAATTTACAGTTGAAGGAGA+TGG 0.569253 8_2:+15839242 Msa1236690:intron
TGATGAGGAAGGCAAAAGCT+AGG 0.569500 8_2:+15834927 Msa1236690:CDS
AAATTCGGCCCAACAAAGAT+CGG 0.571791 8_2:+15836078 Msa1236690:CDS
TGAACCCAGTGAAGAAGGAT+GGG 0.571822 8_2:+15837102 Msa1236690:CDS
TGAAAAGTTGAGAATGTCCA+TGG 0.575017 8_2:-15834123 None:intergenic
GAGAAAGAGATGTTGATGAA+GGG 0.579923 8_2:+15834953 Msa1236690:CDS
ATTGGAGTTGGTGAAGATGG+TGG 0.580295 8_2:+15836351 Msa1236690:CDS
GTTTATTGTTCAAGGTGAGG+AGG 0.580520 8_2:+15834727 Msa1236690:CDS
AGATTCTAATCAAAAGGAAA+GGG 0.581650 8_2:+15835801 Msa1236690:CDS
TGGAGAACTTGACTGGATGC+AGG 0.581964 8_2:+15836371 Msa1236690:CDS
AAAATCATACCACGGTGGAA+AGG 0.583759 8_2:+15837002 Msa1236690:CDS
TATGAAACTCATTGCGTAAG+CGG 0.584197 8_2:-15839910 None:intergenic
GAAAGCTTCGGAATCAATCC+CGG 0.597684 8_2:-15834794 None:intergenic
TTCTGATGATATCACAGAGA+AGG 0.598224 8_2:+15835366 Msa1236690:CDS
TGGAGAAGAAAATTATGATG+AGG 0.598863 8_2:+15834912 Msa1236690:CDS
CCTAGCAGTTACTGTGAGAG+AGG 0.600150 8_2:+15838228 Msa1236690:intron
CTAGCTAGGGAGATGGAGAG+TGG 0.600488 8_2:+15834668 Msa1236690:CDS
ACTGTTGTTGAAGGAAGTGA+TGG 0.603699 8_2:+15837215 Msa1236690:CDS
TGACTAACTACGTGAATGTG+TGG 0.605889 8_2:-15839729 None:intergenic
TGTTCCTCAGTGAATTGCGA+CGG 0.606179 8_2:-15834304 None:intergenic
TCATGAATCTACGGAGACAC+CGG 0.610395 8_2:+15834991 Msa1236690:CDS
TACATGGTGTCTCAGAAGCA+AGG 0.611094 8_2:-15837667 None:intergenic
TTGGAGCTAGAAGATAAAGA+TGG 0.613339 8_2:-15839864 None:intergenic
ACAAGAAACCAAGGATCATA+CGG 0.613507 8_2:+15835551 Msa1236690:CDS
GAGAAATCAGAGAAATGGCT+AGG 0.613725 8_2:+15835149 Msa1236690:CDS
ATTAACTTCATGGTCTGAAG+TGG 0.613832 8_2:-15836157 None:intergenic
TTCTGATCAGAATCTTCACT+AGG 0.614418 8_2:-15836048 None:intergenic
GGTTGAAACAATTGTGGACA+AGG 0.615162 8_2:+15839311 Msa1236690:CDS
TGCATACCCTATCCACAAAG+AGG 0.615893 8_2:-15838501 None:intergenic
ACAGAAAGATCATGTTAACA+AGG 0.617259 8_2:-15839993 None:intergenic
TGAACTTGGGAAAGAAAACA+TGG 0.619349 8_2:+15835645 Msa1236690:CDS
AAGATGGTGGAGAACTTGAC+TGG 0.620066 8_2:+15836364 Msa1236690:CDS
GAGATGGAATCAATTGGAGT+TGG 0.621041 8_2:+15836339 Msa1236690:CDS
GTGGTGAAAATGTGATTGCA+AGG 0.622698 8_2:+15834687 Msa1236690:CDS
CTCTGGTGTTGAACCTGGAG+TGG 0.624792 8_2:+15836113 Msa1236690:CDS
GTGCTCGAAGGATTCTGGTA+CGG 0.626732 8_2:+15835846 Msa1236690:CDS
TAAGAAGCTAGCTAGGGAGA+TGG 0.630468 8_2:+15834661 Msa1236690:CDS
GATTACTAGAAACAGAAGAA+GGG 0.631443 8_2:-15834373 None:intergenic
GACAAAGAATGAGTGCTCGA+AGG 0.633816 8_2:+15835834 Msa1236690:CDS
TGAATGTGTGGAAAGCGTAA+TGG 0.635928 8_2:-15839717 None:intergenic
TGATGTGGTTGAAACAATTG+TGG 0.635953 8_2:+15839305 Msa1236690:CDS
GAAACAGACACAAAAGGTGA+CGG 0.637440 8_2:+15839438 Msa1236690:CDS
ATTGATTCCGAAGCTTTCGG+GGG 0.638623 8_2:+15834799 Msa1236690:CDS
GTTCAGTGAACAAGAAACCA+AGG 0.638861 8_2:+15835542 Msa1236690:CDS
TGATGTTGCTATGACTCCGA+AGG 0.642481 8_2:+15835459 Msa1236690:CDS
TCTGCGTTCAGCATAAAACT+GGG 0.644374 8_2:-15839648 None:intergenic
CTCTTCGATGTCAATAACAA+CGG 0.649512 8_2:+15838864 Msa1236690:CDS
ATCAACTTGACGGTCTAAAG+CGG 0.652858 8_2:-15835902 None:intergenic
GCCATTAATAGGAGTGCGCG+AGG 0.653474 8_2:-15835500 None:intergenic
TTCCAAAGCAAGTCTATCAG+AGG 0.654421 8_2:+15835933 Msa1236690:CDS
AGCAGTTACTGTGAGAGAGG+TGG 0.654761 8_2:+15838231 Msa1236690:intron
CAGAAAGATCATGTTAACAA+GGG 0.656092 8_2:-15839992 None:intergenic
TGAAGTTGCAAGCAAAACAA+CGG 0.664436 8_2:+15835318 Msa1236690:CDS
TGGTTACATTGAGCGCGAAG+AGG 0.670430 8_2:+15839141 Msa1236690:CDS
GTTCGTGATAATGAATTGTG+TGG 0.675486 8_2:+15836423 Msa1236690:CDS
AAATCAGAGAAATGGCTAGG+CGG 0.676663 8_2:+15835152 Msa1236690:CDS
CTCCGTGGAGAAAATTCCCG+AGG 0.679170 8_2:+15837028 Msa1236690:CDS
ACGGTGGAAAGGACCCTCCG+TGG 0.691327 8_2:+15837013 Msa1236690:CDS
TTTAGGATGAAAGATGCCCA+AGG 0.697078 8_2:-15838916 None:intergenic
TTGAATGGAGCCATTCATGG+AGG 0.701381 8_2:-15836542 None:intergenic
CACCAGAGAAAATCATACCA+CGG 0.706946 8_2:+15836994 Msa1236690:CDS
GATTGCAAGGAATAGTTCTG+TGG 0.720745 8_2:+15834700 Msa1236690:CDS
TTGATGAATATAAAGCTCTG+GGG 0.728057 8_2:-15834181 None:intergenic
ACGGAGGGTCCTTTCCACCG+TGG 0.730661 8_2:-15837011 None:intergenic
CAGAGAAAATCATACCACGG+TGG 0.784439 8_2:+15836997 Msa1236690:CDS
CCAACCGTCGCAATTCACTG+AGG 0.794256 8_2:+15834300 Msa1236690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTGAAAATATTGATTA+CGG + chr8_2:15836564-15836583 Msa1236690:CDS 10.0%
!!! TTATGTGTATTATATAATTT+TGG - chr8_2:15836609-15836628 None:intergenic 10.0%
!! AAAAAAAAAAAAACATGAAA+AGG + chr8_2:15837775-15837794 Msa1236690:intron 10.0%
!!! ATCACTTTATAAATTTTATA+AGG + chr8_2:15839365-15839384 Msa1236690:intron 10.0%
!!! AAATGTTTTGTTGAATAAAT+TGG + chr8_2:15834466-15834485 Msa1236690:CDS 15.0%
!!! CAATATTTTCAATATTTGAA+TGG - chr8_2:15836560-15836579 None:intergenic 15.0%
!! ACAAAAAAAAAAACATGAAA+AGG - chr8_2:15837707-15837726 None:intergenic 15.0%
!! ATATATTAAGTGTAAAAAAG+AGG - chr8_2:15837875-15837894 None:intergenic 15.0%
!!! AAAGTTTCTTATATATGTTT+TGG + chr8_2:15839388-15839407 Msa1236690:intron 15.0%
!!! AAGTTTCTTATATATGTTTT+GGG + chr8_2:15839389-15839408 Msa1236690:intron 15.0%
!!! TTTAAAACTTACATTAGATA+AGG - chr8_2:15839534-15839553 None:intergenic 15.0%
!!! AATTTTTGATTCTAATTTCA+GGG + chr8_2:15839608-15839627 Msa1236690:intron 15.0%
!!! AAAAAGTGTTTTTGTGAAAT+GGG - chr8_2:15834217-15834236 None:intergenic 20.0%
!!! TTCAAGAAAGTTTCAAATTT+TGG + chr8_2:15834259-15834278 Msa1236690:CDS 20.0%
!! TCTTGATAAACAGTAAAAAT+AGG - chr8_2:15834548-15834567 None:intergenic 20.0%
!!! TTCCTGATTTGTTTAATTAT+TGG - chr8_2:15835982-15836001 None:intergenic 20.0%
!! TAAATATGAAATCAGATTCT+AGG + chr8_2:15836013-15836032 Msa1236690:CDS 20.0%
!!! GCTCTAATTTTCTTAATTAT+AGG - chr8_2:15836255-15836274 None:intergenic 20.0%
!! ATAATTAAGAAAATTAGAGC+TGG + chr8_2:15836255-15836274 Msa1236690:CDS 20.0%
!!! ATGTATTAATTCGTTCATTT+TGG + chr8_2:15836782-15836801 Msa1236690:intron 20.0%
!!! TGAACAATATTTTTTTCTAG+AGG + chr8_2:15836866-15836885 Msa1236690:intron 20.0%
!! TTTATCTAGGAATTCATTTA+GGG - chr8_2:15837054-15837073 None:intergenic 20.0%
!!! TTTTATCTAGGAATTCATTT+AGG - chr8_2:15837055-15837074 None:intergenic 20.0%
!!! TTGTCTTTCTTTTTTTATCT+AGG - chr8_2:15837067-15837086 None:intergenic 20.0%
!!! TCTATCAATAAGTTTTGAAT+AGG + chr8_2:15837482-15837501 Msa1236690:intron 20.0%
!! ATAAACAAGTTAAATTTCCA+AGG - chr8_2:15837732-15837751 None:intergenic 20.0%
!! TTATGCATATATAAGTCATT+TGG + chr8_2:15839033-15839052 Msa1236690:intron 20.0%
!! TATGCATATATAAGTCATTT+GGG + chr8_2:15839034-15839053 Msa1236690:intron 20.0%
!!! TGACAATTGTTTAAATGTTT+TGG + chr8_2:15839210-15839229 Msa1236690:intron 20.0%
!!! AGTTTCTTATATATGTTTTG+GGG + chr8_2:15839390-15839409 Msa1236690:intron 20.0%
!!! CAATTTTTGATTCTAATTTC+AGG + chr8_2:15839607-15839626 Msa1236690:intron 20.0%
!!! CATAACTAAGATTTTAAACT+CGG - chr8_2:15839817-15839836 None:intergenic 20.0%
!! AGGGATTTATAATAAATTTG+AGG - chr8_2:15839976-15839995 None:intergenic 20.0%
!!! ATGAAAGAGTGTTTAGAAAT+TGG - chr8_2:15834028-15834047 None:intergenic 25.0%
!! CTGTATATCTTTTTAATCCA+TGG + chr8_2:15834106-15834125 Msa1236690:exon 25.0%
!! AATGGGTATGAAATAGTTTT+GGG - chr8_2:15834152-15834171 None:intergenic 25.0%
!! AAATGGGTATGAAATAGTTT+TGG - chr8_2:15834153-15834172 None:intergenic 25.0%
! TTTGATGAATATAAAGCTCT+GGG - chr8_2:15834185-15834204 None:intergenic 25.0%
!!! AAAAGTGTTTTTGTGAAATG+GGG - chr8_2:15834216-15834235 None:intergenic 25.0%
!!! GAAAAAGTGTTTTTGTGAAA+TGG - chr8_2:15834218-15834237 None:intergenic 25.0%
! CATATTGAAGAAATTGATGA+TGG + chr8_2:15834395-15834414 Msa1236690:CDS 25.0%
!! ACTACAAAAATCTGAACTTT+TGG + chr8_2:15834439-15834458 Msa1236690:CDS 25.0%
!! CTACAAAAATCTGAACTTTT+GGG + chr8_2:15834440-15834459 Msa1236690:CDS 25.0%
! TGTTGAATAAATTGGAGAAT+TGG + chr8_2:15834474-15834493 Msa1236690:CDS 25.0%
! GTTGAATAAATTGGAGAATT+GGG + chr8_2:15834475-15834494 Msa1236690:CDS 25.0%
!!! ATAAGGAAGATGTTGATTTT+TGG + chr8_2:15834507-15834526 Msa1236690:CDS 25.0%
!!! TAAGGAAGATGTTGATTTTT+GGG + chr8_2:15834508-15834527 Msa1236690:CDS 25.0%
! ACTGTTTATCAAGATTCATT+TGG + chr8_2:15834554-15834573 Msa1236690:CDS 25.0%
!! TGAAATAGAGGATAAGATTT+TGG + chr8_2:15834634-15834653 Msa1236690:CDS 25.0%
!!! TGTGTTTTTGTTGTTATGTT+TGG + chr8_2:15834839-15834858 Msa1236690:CDS 25.0%
! TGAAGTTATTCATGAATCTA+CGG + chr8_2:15834982-15835001 Msa1236690:CDS 25.0%
! TTAAAAACAACAAATTCGGA+AGG - chr8_2:15835682-15835701 None:intergenic 25.0%
! GTCGTTAAAAACAACAAATT+CGG - chr8_2:15835686-15835705 None:intergenic 25.0%
! AAGATTCTAATCAAAAGGAA+AGG + chr8_2:15835800-15835819 Msa1236690:CDS 25.0%
! AGATTCTAATCAAAAGGAAA+GGG + chr8_2:15835801-15835820 Msa1236690:CDS 25.0%
! AGCCAATAATTAAACAAATC+AGG + chr8_2:15835977-15835996 Msa1236690:CDS 25.0%
!! AGTAGAAAGAAAAGATTTTC+TGG + chr8_2:15836186-15836205 Msa1236690:CDS 25.0%
! TTATCTACTAGTGTTAATTG+TGG + chr8_2:15836833-15836852 Msa1236690:intron 25.0%
!!! CTTTACTTTTGAAGATGAAT+CGG - chr8_2:15837150-15837169 None:intergenic 25.0%
! AAATATCATTCACATAAGCA+TGG + chr8_2:15837383-15837402 Msa1236690:intron 25.0%
!!! GAATAGGAATAAGTGTTTTT+TGG + chr8_2:15837498-15837517 Msa1236690:intron 25.0%
! AAAAGTAGCAGAAAATATCA+TGG + chr8_2:15837553-15837572 Msa1236690:CDS 25.0%
!! TCATTTTCTTTTACTTCTGA+AGG - chr8_2:15837614-15837633 None:intergenic 25.0%
! CTTCAGAACAAGAATTATTA+AGG - chr8_2:15837637-15837656 None:intergenic 25.0%
!!! TGTTTTTTTTTTTGTTGCCT+TGG + chr8_2:15837712-15837731 Msa1236690:intron 25.0%
! GTGTGATTTAGATAATTTCA+TGG + chr8_2:15837824-15837843 Msa1236690:intron 25.0%
!! GATAATTTCATGGATTACTT+TGG + chr8_2:15837834-15837853 Msa1236690:intron 25.0%
! AAATAGTTTCACAAGTGTTT+AGG - chr8_2:15837978-15837997 None:intergenic 25.0%
! TAAACACTTGTGAAACTATT+TGG + chr8_2:15837977-15837996 Msa1236690:intron 25.0%
! AAACACTTGTGAAACTATTT+GGG + chr8_2:15837978-15837997 Msa1236690:intron 25.0%
! TATTCATATACAATTGGTGA+TGG - chr8_2:15838177-15838196 None:intergenic 25.0%
!! GAAAAATGGACTTATTCAAA+AGG + chr8_2:15838297-15838316 Msa1236690:CDS 25.0%
! TGTGTATTGTGTATATTAAC+AGG + chr8_2:15838435-15838454 Msa1236690:intron 25.0%
! GAAATAAGCATGTAAGTATT+TGG + chr8_2:15838660-15838679 Msa1236690:intron 25.0%
! GAGATCAAACAATTGAATTT+GGG - chr8_2:15838823-15838842 None:intergenic 25.0%
! CATTTAGATTATATGACTTG+AGG + chr8_2:15839113-15839132 Msa1236690:CDS 25.0%
! ACATGAAAATTTACAGTTGA+AGG + chr8_2:15839236-15839255 Msa1236690:intron 25.0%
!!! GTTTCTTATATATGTTTTGG+GGG + chr8_2:15839391-15839410 Msa1236690:intron 25.0%
!!! TTTCTTATATATGTTTTGGG+GGG + chr8_2:15839392-15839411 Msa1236690:intron 25.0%
! GTTAGAAATGTATTTCTTAC+TGG + chr8_2:15839836-15839855 Msa1236690:three_prime_UTR 25.0%
!! ATTTTGCGCATTTCATAATT+TGG - chr8_2:15839886-15839905 None:intergenic 25.0%
AACATCGATAAGTGTATGTT+TGG - chr8_2:15833940-15833959 None:intergenic 30.0%
! ATCAAAAAGATAGTGTTGAG+TGG - chr8_2:15833998-15834017 None:intergenic 30.0%
!! ATGGGTATGAAATAGTTTTG+GGG - chr8_2:15834151-15834170 None:intergenic 30.0%
TTGATGAATATAAAGCTCTG+GGG - chr8_2:15834184-15834203 None:intergenic 30.0%
GTTTGATGAATATAAAGCTC+TGG - chr8_2:15834186-15834205 None:intergenic 30.0%
GATTACTAGAAACAGAAGAA+GGG - chr8_2:15834376-15834395 None:intergenic 30.0%
TGATTACTAGAAACAGAAGA+AGG - chr8_2:15834377-15834396 None:intergenic 30.0%
!!! TGATGGTAGTTTTGTTGAAT+TGG + chr8_2:15834412-15834431 Msa1236690:CDS 30.0%
!! GAATTGGGTTGATAAGTATA+AGG + chr8_2:15834490-15834509 Msa1236690:CDS 30.0%
!!! AAGGAAGATGTTGATTTTTG+GGG + chr8_2:15834509-15834528 Msa1236690:CDS 30.0%
!!! ATGTTGATTTTTGGGGTATT+GGG + chr8_2:15834516-15834535 Msa1236690:CDS 30.0%
GTTTATCAAGATTCATTTGG+TGG + chr8_2:15834557-15834576 Msa1236690:CDS 30.0%
!! GATGAGATTTTGAAAAGAGT+TGG + chr8_2:15834605-15834624 Msa1236690:CDS 30.0%
! AATAGAGGATAAGATTTTGG+AGG + chr8_2:15834637-15834656 Msa1236690:CDS 30.0%
TAAGTTTATTGTTCAAGGTG+AGG + chr8_2:15834724-15834743 Msa1236690:CDS 30.0%
TGGAGAAGAAAATTATGATG+AGG + chr8_2:15834912-15834931 Msa1236690:CDS 30.0%
GAAGAAAATTATGATGAGGA+AGG + chr8_2:15834916-15834935 Msa1236690:CDS 30.0%
TTCTCTAGTTAGTAAGGATA+TGG + chr8_2:15835201-15835220 Msa1236690:CDS 30.0%
AGTTAGTAAGGATATGGAAA+TGG + chr8_2:15835207-15835226 Msa1236690:CDS 30.0%
TATGACTTCACTCTCATTAT+AGG - chr8_2:15835254-15835273 None:intergenic 30.0%
AGCAAAACAACGGATAATAA+TGG + chr8_2:15835328-15835347 Msa1236690:CDS 30.0%
TGATAGAGAAATTGGTAAAG+AGG + chr8_2:15835423-15835442 Msa1236690:CDS 30.0%
GTCATAAATGAGCCATTAAT+AGG - chr8_2:15835514-15835533 None:intergenic 30.0%
! CAAAATCTGGAATTGAACTT+GGG + chr8_2:15835632-15835651 Msa1236690:CDS 30.0%
!! CTTTTGATTAGAATCTTCAC+TGG - chr8_2:15835797-15835816 None:intergenic 30.0%
CAGTGAAGATTCTAATCAAA+AGG + chr8_2:15835795-15835814 Msa1236690:CDS 30.0%
GATCAGAAGGATAAGAAATT+CGG + chr8_2:15836063-15836082 Msa1236690:CDS 30.0%
TACTATCACCATTAACTTCA+TGG - chr8_2:15836170-15836189 None:intergenic 30.0%
! TTTCTGGAAAGACAGAAAAT+TGG + chr8_2:15836202-15836221 Msa1236690:CDS 30.0%
TAATTATAGGCTCAACTTCA+TGG - chr8_2:15836242-15836261 None:intergenic 30.0%
! ATCTCAGTTGGTATATCTAA+AGG - chr8_2:15836324-15836343 None:intergenic 30.0%
TTTAGATATACCAACTGAGA+TGG + chr8_2:15836323-15836342 Msa1236690:CDS 30.0%
TCGTCGTTCATCAAATAAAA+TGG - chr8_2:15836456-15836475 None:intergenic 30.0%
GATAAAGATGCTTTCTTCAA+AGG + chr8_2:15836477-15836496 Msa1236690:CDS 30.0%
TACTTCTGTCCTTTATCATA+AGG + chr8_2:15836722-15836741 Msa1236690:intron 30.0%
GCTAAAAGACCTTATGATAA+AGG - chr8_2:15836734-15836753 None:intergenic 30.0%
TCTAGAGGATACTTATGTTT+AGG + chr8_2:15836881-15836900 Msa1236690:intron 30.0%
TATATACTAATGCCATCTAG+AGG - chr8_2:15836969-15836988 None:intergenic 30.0%
CGATTCATCTTCAAAAGTAA+AGG + chr8_2:15837148-15837167 Msa1236690:CDS 30.0%
TCTTCAAAAGTAAAGGTTGA+TGG + chr8_2:15837155-15837174 Msa1236690:CDS 30.0%
!!! GATTTTTTGACTTCTTCATC+GGG - chr8_2:15837190-15837209 None:intergenic 30.0%
!!! GGATTTTTTGACTTCTTCAT+CGG - chr8_2:15837191-15837210 None:intergenic 30.0%
!!! TGTTTTTTGGTTGTCAAGAA+TGG + chr8_2:15837511-15837530 Msa1236690:CDS 30.0%
!!! GTTTTTTGGTTGTCAAGAAT+GGG + chr8_2:15837512-15837531 Msa1236690:CDS 30.0%
!! GGAAGCTTTAGATAATTTCA+TGG + chr8_2:15837796-15837815 Msa1236690:intron 30.0%
ATCCAAACAGAACCTTAAAT+TGG + chr8_2:15838099-15838118 Msa1236690:intron 30.0%
! AACCAATTTAAGGTTCTGTT+TGG - chr8_2:15838104-15838123 None:intergenic 30.0%
TGTTTGCATAAACGAAAACA+CGG - chr8_2:15838136-15838155 None:intergenic 30.0%
AGCAGAGTTATTGTGAAAAA+TGG + chr8_2:15838283-15838302 Msa1236690:CDS 30.0%
!! CACTTTGCTCTTTTTAGAAA+CGG + chr8_2:15838466-15838485 Msa1236690:CDS 30.0%
TTGTTAGGAAGAGCTTATTT+GGG + chr8_2:15838627-15838646 Msa1236690:intron 30.0%
ATCGGATGTGAATAAAAAAG+AGG - chr8_2:15838795-15838814 None:intergenic 30.0%
! AATTGAATTTGGGATGGAAT+CGG - chr8_2:15838813-15838832 None:intergenic 30.0%
TCAAACAATTGAATTTGGGA+TGG - chr8_2:15838819-15838838 None:intergenic 30.0%
GGAGATCAAACAATTGAATT+TGG - chr8_2:15838824-15838843 None:intergenic 30.0%
TAAATTCGCCAAACTCTATA+TGG - chr8_2:15838890-15838909 None:intergenic 30.0%
!! CATATTATTTTGTCTGCTTG+AGG - chr8_2:15838945-15838964 None:intergenic 30.0%
AAATTTACAGTTGAAGGAGA+TGG + chr8_2:15839242-15839261 Msa1236690:intron 30.0%
! TTTCTAGAAACAGACACAAA+AGG + chr8_2:15839432-15839451 Msa1236690:CDS 30.0%
! GAAAAATTGACTTCGAAGAA+TGG + chr8_2:15839460-15839479 Msa1236690:CDS 30.0%
AAACTCGAATCAAAGCTATA+TGG - chr8_2:15839776-15839795 None:intergenic 30.0%
CAGAAAGATCATGTTAACAA+GGG - chr8_2:15839995-15840014 None:intergenic 30.0%
ACAGAAAGATCATGTTAACA+AGG - chr8_2:15839996-15840015 None:intergenic 30.0%
CATTATATTAGACGCCTTAA+TGG - chr8_2:15840050-15840069 None:intergenic 30.0%
TGAAAAGTTGAGAATGTCCA+TGG - chr8_2:15834126-15834145 None:intergenic 35.0%
!!! TGGGTATGAAATAGTTTTGG+GGG - chr8_2:15834150-15834169 None:intergenic 35.0%
!! TTTTGTGAAATGGGGTGTTA+CGG - chr8_2:15834208-15834227 None:intergenic 35.0%
GAATGTGAATTCTACTTACC+TGG - chr8_2:15834346-15834365 None:intergenic 35.0%
!!! GATGTTGATTTTTGGGGTAT+TGG + chr8_2:15834515-15834534 Msa1236690:CDS 35.0%
!! ATTCATTTGGTGGTGTTAAG+AGG + chr8_2:15834567-15834586 Msa1236690:CDS 35.0%
!! TTCATTTGGTGGTGTTAAGA+GGG + chr8_2:15834568-15834587 Msa1236690:CDS 35.0%
!! GAGATTTTGAAAAGAGTTGG+TGG + chr8_2:15834608-15834627 Msa1236690:CDS 35.0%
!! AGTTGGTGGAAATGAAATAG+AGG + chr8_2:15834622-15834641 Msa1236690:CDS 35.0%
GTGGCTAAGTTTATTGTTCA+AGG + chr8_2:15834719-15834738 Msa1236690:CDS 35.0%
! GTGAAGAAGTTATTTCGTGT+TGG + chr8_2:15834863-15834882 Msa1236690:CDS 35.0%
!! GTTATTTCGTGTTGGTGATA+AGG + chr8_2:15834871-15834890 Msa1236690:CDS 35.0%
! GAGAAAGAGATGTTGATGAA+GGG + chr8_2:15834953-15834972 Msa1236690:CDS 35.0%
!!! GGCTTTTTTACACCTATAAC+CGG - chr8_2:15835013-15835032 None:intergenic 35.0%
GGTTATAGGTGTAAAAAAGC+CGG + chr8_2:15835012-15835031 Msa1236690:CDS 35.0%
CTTGTAGTTCAGAATTCTTC+TGG + chr8_2:15835094-15835113 Msa1236690:CDS 35.0%
! GAGAATGGATATGGACTATA+AGG + chr8_2:15835123-15835142 Msa1236690:CDS 35.0%
AAATGGATGACAGTGTGATT+GGG + chr8_2:15835224-15835243 Msa1236690:CDS 35.0%
! TGCTTGCAACTTCATTTTGA+CGG - chr8_2:15835312-15835331 None:intergenic 35.0%
TGAAGTTGCAAGCAAAACAA+CGG + chr8_2:15835318-15835337 Msa1236690:CDS 35.0%
TTCTGATGATATCACAGAGA+AGG + chr8_2:15835366-15835385 Msa1236690:CDS 35.0%
GTTCGTGATGATAGAGAAAT+TGG + chr8_2:15835415-15835434 Msa1236690:CDS 35.0%
TTATTGTCTTCTCTGTCCTT+CGG - chr8_2:15835478-15835497 None:intergenic 35.0%
ACAAGAAACCAAGGATCATA+CGG + chr8_2:15835551-15835570 Msa1236690:CDS 35.0%
GAAAATCCTGATGCAAAATC+TGG + chr8_2:15835619-15835638 Msa1236690:CDS 35.0%
! TCAATTCCAGATTTTGCATC+AGG - chr8_2:15835628-15835647 None:intergenic 35.0%
! GCAAAATCTGGAATTGAACT+TGG + chr8_2:15835631-15835650 Msa1236690:CDS 35.0%
TGAACTTGGGAAAGAAAACA+TGG + chr8_2:15835645-15835664 Msa1236690:CDS 35.0%
! TCTCCAAATTTTTCTGCTTC+TGG - chr8_2:15835708-15835727 None:intergenic 35.0%
TCCAGAAGTGACACATTAAA+TGG + chr8_2:15835742-15835761 Msa1236690:CDS 35.0%
!! TCCATTTAATGTGTCACTTC+TGG - chr8_2:15835746-15835765 None:intergenic 35.0%
! TAGAATCTTCACTGGCATTT+TGG - chr8_2:15835789-15835808 None:intergenic 35.0%
!! TTTTGAAGGTCTTCCAATAC+AGG - chr8_2:15835874-15835893 None:intergenic 35.0%
CAGAATCTTCACTAGGATTT+AGG - chr8_2:15836044-15836063 None:intergenic 35.0%
TTCTGATCAGAATCTTCACT+AGG - chr8_2:15836051-15836070 None:intergenic 35.0%
TAGTGAAGATTCTGATCAGA+AGG + chr8_2:15836050-15836069 Msa1236690:CDS 35.0%
ATTAACTTCATGGTCTGAAG+TGG - chr8_2:15836160-15836179 None:intergenic 35.0%
ACTTCAGACCATGAAGTTAA+TGG + chr8_2:15836159-15836178 Msa1236690:CDS 35.0%
! GTTCGTGATAATGAATTGTG+TGG + chr8_2:15836423-15836442 Msa1236690:CDS 35.0%
TATTTGAATGGAGCCATTCA+TGG - chr8_2:15836548-15836567 None:intergenic 35.0%
! GAAAATATTGATTACGGAGC+AGG + chr8_2:15836570-15836589 Msa1236690:CDS 35.0%
TTGTCCTTTATTCCTCTAGA+TGG + chr8_2:15836954-15836973 Msa1236690:intron 35.0%
AATGCCATCTAGAGGAATAA+AGG - chr8_2:15836961-15836980 None:intergenic 35.0%
! CTTCACTGGGTTCAAATTTT+TGG - chr8_2:15837096-15837115 None:intergenic 35.0%
AAATTTGAACCCAGTGAAGA+AGG + chr8_2:15837097-15837116 Msa1236690:CDS 35.0%
!! GTAAAGGTTGATGGTTCAAT+AGG + chr8_2:15837164-15837183 Msa1236690:CDS 35.0%
AATCCAAAGACTGTTGTTGA+AGG + chr8_2:15837206-15837225 Msa1236690:CDS 35.0%
AGCTAAAATTTCTGCTGTGA+TGG + chr8_2:15837420-15837439 Msa1236690:intron 35.0%
TAAAATTTCTGCTGTGATGG+TGG + chr8_2:15837423-15837442 Msa1236690:intron 35.0%
GTAGCAGAAAATATCATGGA+TGG + chr8_2:15837557-15837576 Msa1236690:CDS 35.0%
GGAAGCTTTCTTTACTTACA+TGG - chr8_2:15837686-15837705 None:intergenic 35.0%
!!! CATGGATTACTTTGGTTTTG+TGG + chr8_2:15837842-15837861 Msa1236690:intron 35.0%
! ATACCATCTTAAGGGCTTTT+TGG + chr8_2:15837925-15837944 Msa1236690:intron 35.0%
AATCCAAAAAGCCCTTAAGA+TGG - chr8_2:15837931-15837950 None:intergenic 35.0%
TTAGAGCTAACAATCAGTTC+TGG + chr8_2:15838053-15838072 Msa1236690:intron 35.0%
GGTGGAAATGAACCAATTTA+AGG - chr8_2:15838114-15838133 None:intergenic 35.0%
GTTTGCATAAACGAAAACAC+GGG - chr8_2:15838135-15838154 None:intergenic 35.0%
!! CATATACAATTGGTGATGGA+TGG - chr8_2:15838173-15838192 None:intergenic 35.0%
GGACGCTATTCATATACAAT+TGG - chr8_2:15838183-15838202 None:intergenic 35.0%
AGAGAAGAGTTTCAGAACAA+TGG - chr8_2:15838204-15838223 None:intergenic 35.0%
ACTTGAATCTCTTGTTCGAT+TGG + chr8_2:15838350-15838369 Msa1236690:intron 35.0%
!!! GGCATTTGGCATAAGTTTTT+TGG - chr8_2:15838598-15838617 None:intergenic 35.0%
AACAACTTCTGAATGGCATT+TGG - chr8_2:15838612-15838631 None:intergenic 35.0%
AATGCCATTCAGAAGTTGTT+AGG + chr8_2:15838612-15838631 Msa1236690:intron 35.0%
TCTTCCTAACAACTTCTGAA+TGG - chr8_2:15838619-15838638 None:intergenic 35.0%
GTTGTTAGGAAGAGCTTATT+TGG + chr8_2:15838626-15838645 Msa1236690:intron 35.0%
AAGAGGATGAAGAGAATGAA+CGG - chr8_2:15838778-15838797 None:intergenic 35.0%
CTCTTCGATGTCAATAACAA+CGG + chr8_2:15838864-15838883 Msa1236690:CDS 35.0%
TCACCACGTAAAATTCTTCT+TGG + chr8_2:15839084-15839103 Msa1236690:intron 35.0%
TTATATGACTTGAGGCATAC+TGG + chr8_2:15839121-15839140 Msa1236690:CDS 35.0%
TATATTGTACGAAAGACCAC+AGG - chr8_2:15839175-15839194 None:intergenic 35.0%
!!! GGTTTTGGTTGAATCTGATT+TGG + chr8_2:15839272-15839291 Msa1236690:CDS 35.0%
TGATGTGGTTGAAACAATTG+TGG + chr8_2:15839305-15839324 Msa1236690:CDS 35.0%
GAAGAATGGAGTGAATATGT+TGG + chr8_2:15839474-15839493 Msa1236690:CDS 35.0%
GTCATGTTCTTGAGTAATGA+TGG - chr8_2:15839507-15839526 None:intergenic 35.0%
CTGTGTCATAATGCAATGAA+TGG - chr8_2:15839575-15839594 None:intergenic 35.0%
AAACTACGAGTGTGATTCTT+CGG - chr8_2:15839676-15839695 None:intergenic 35.0%
TTGGAGCTAGAAGATAAAGA+TGG - chr8_2:15839867-15839886 None:intergenic 35.0%
TATGAAACTCATTGCGTAAG+CGG - chr8_2:15839913-15839932 None:intergenic 35.0%
AACATGATCTTTCTGTGATG+CGG + chr8_2:15840000-15840019 Msa1236690:three_prime_UTR 35.0%
ATTCTTCATCTGCTGATACA+TGG - chr8_2:15840083-15840102 None:intergenic 35.0%
ATCAGCAGATGAAGAATTTG+TGG + chr8_2:15840086-15840105 Msa1236690:three_prime_UTR 35.0%
TCAGCAGATGAAGAATTTGT+GGG + chr8_2:15840087-15840106 Msa1236690:three_prime_UTR 35.0%
!!! GGGTATGAAATAGTTTTGGG+GGG - chr8_2:15834149-15834168 None:intergenic 40.0%
GAAACAGAAGAAGGGTCATT+GGG - chr8_2:15834368-15834387 None:intergenic 40.0%
AGAAACAGAAGAAGGGTCAT+TGG - chr8_2:15834369-15834388 None:intergenic 40.0%
GTGGTGAAAATGTGATTGCA+AGG + chr8_2:15834687-15834706 Msa1236690:CDS 40.0%
! GATTGCAAGGAATAGTTCTG+TGG + chr8_2:15834700-15834719 Msa1236690:CDS 40.0%
GTTTATTGTTCAAGGTGAGG+AGG + chr8_2:15834727-15834746 Msa1236690:CDS 40.0%
! GGAGAAGGGTGATTTTGTTA+AGG + chr8_2:15834748-15834767 Msa1236690:CDS 40.0%
! GATTTTGTTAAGGCTGTTCG+TGG + chr8_2:15834758-15834777 Msa1236690:CDS 40.0%
!! GTGTTGGTGATAAGGAGATT+CGG + chr8_2:15834879-15834898 Msa1236690:CDS 40.0%
! GGAGATTCGGTATACAGAAA+TGG + chr8_2:15834892-15834911 Msa1236690:CDS 40.0%
! GGAGAAAGAGATGTTGATGA+AGG + chr8_2:15834952-15834971 Msa1236690:CDS 40.0%
AAAAAAGCCGGAGTTGGATA+AGG + chr8_2:15835024-15835043 Msa1236690:CDS 40.0%
TTCTTCTGGTGAAGTGAGAA+TGG + chr8_2:15835108-15835127 Msa1236690:CDS 40.0%
TGGTGAAGTGAGAATGGATA+TGG + chr8_2:15835114-15835133 Msa1236690:CDS 40.0%
GGTTCGAGAAATCAGAGAAA+TGG + chr8_2:15835144-15835163 Msa1236690:CDS 40.0%
GAGAAATCAGAGAAATGGCT+AGG + chr8_2:15835149-15835168 Msa1236690:CDS 40.0%
AAATCAGAGAAATGGCTAGG+CGG + chr8_2:15835152-15835171 Msa1236690:CDS 40.0%
GGATCGTTCTCTAGTTAGTA+AGG + chr8_2:15835195-15835214 Msa1236690:CDS 40.0%
GAAATGGATGACAGTGTGAT+TGG + chr8_2:15835223-15835242 Msa1236690:CDS 40.0%
ATCACGAACAATCTCATGCT+TGG - chr8_2:15835404-15835423 None:intergenic 40.0%
GTTCAGTGAACAAGAAACCA+AGG + chr8_2:15835542-15835561 Msa1236690:CDS 40.0%
TTAACAGACCGTATGATCCT+TGG - chr8_2:15835562-15835581 None:intergenic 40.0%
AAGGATCATACGGTCTGTTA+AGG + chr8_2:15835561-15835580 Msa1236690:CDS 40.0%
CGACCAGAAGCAGAAAAATT+TGG + chr8_2:15835702-15835721 Msa1236690:CDS 40.0%
!!! TCTTCACTGGCATTTTGGTT+GGG - chr8_2:15835784-15835803 None:intergenic 40.0%
!! ATCTTCACTGGCATTTTGGT+TGG - chr8_2:15835785-15835804 None:intergenic 40.0%
ATCAACTTGACGGTCTAAAG+CGG - chr8_2:15835905-15835924 None:intergenic 40.0%
AACCAAAGCCATCAACTTGA+CGG - chr8_2:15835915-15835934 None:intergenic 40.0%
TTCCAAAGCAAGTCTATCAG+AGG + chr8_2:15835933-15835952 Msa1236690:CDS 40.0%
TCTTCACTAGGATTTAGGTC+AGG - chr8_2:15836039-15836058 None:intergenic 40.0%
AAATTCGGCCCAACAAAGAT+CGG + chr8_2:15836078-15836097 Msa1236690:CDS 40.0%
TGATGTCACCGATCTTTGTT+GGG - chr8_2:15836089-15836108 None:intergenic 40.0%
TTGATGTCACCGATCTTTGT+TGG - chr8_2:15836090-15836109 None:intergenic 40.0%
! TTTTGACGAATTACCACTCC+AGG - chr8_2:15836129-15836148 None:intergenic 40.0%
TGGAAAGACAGAAAATTGGC+TGG + chr8_2:15836206-15836225 Msa1236690:CDS 40.0%
! CCAATTGATTCCATCTCAGT+TGG - chr8_2:15836336-15836355 None:intergenic 40.0%
CCAACTGAGATGGAATCAAT+TGG + chr8_2:15836333-15836352 Msa1236690:CDS 40.0%
GAGATGGAATCAATTGGAGT+TGG + chr8_2:15836339-15836358 Msa1236690:CDS 40.0%
!! TCAATTGGAGTTGGTGAAGA+TGG + chr8_2:15836348-15836367 Msa1236690:CDS 40.0%
AACTTTCTCACCTCCATGAA+TGG + chr8_2:15836532-15836551 Msa1236690:CDS 40.0%
CACCAGAGAAAATCATACCA+CGG + chr8_2:15836994-15837013 Msa1236690:CDS 40.0%
AAAATCATACCACGGTGGAA+AGG + chr8_2:15837002-15837021 Msa1236690:CDS 40.0%
! TAGGAATTCATTTAGGGCCT+CGG - chr8_2:15837048-15837067 None:intergenic 40.0%
!! CACTGGGTTCAAATTTTTGG+TGG - chr8_2:15837093-15837112 None:intergenic 40.0%
CTTCCTTCAACAACAGTCTT+TGG - chr8_2:15837212-15837231 None:intergenic 40.0%
ACTGTTGTTGAAGGAAGTGA+TGG + chr8_2:15837215-15837234 Msa1236690:CDS 40.0%
!! TTTTGGTTGTCAAGAATGGG+TGG + chr8_2:15837515-15837534 Msa1236690:CDS 40.0%
CTTATCTTTGCCAACTTCAC+AGG - chr8_2:15837585-15837604 None:intergenic 40.0%
AAACAAGCGAAACCTCTTTG+TGG + chr8_2:15838489-15838508 Msa1236690:CDS 40.0%
AGAGGATGAAGAGAATGAAC+GGG - chr8_2:15838777-15838796 None:intergenic 40.0%
GATCAAACATCTGCATGGAA+AGG - chr8_2:15838845-15838864 None:intergenic 40.0%
GAAGAGATCAAACATCTGCA+TGG - chr8_2:15838850-15838869 None:intergenic 40.0%
AACAACGGCCATATAGAGTT+TGG + chr8_2:15838879-15838898 Msa1236690:CDS 40.0%
TGGCGAATTTATCAGATCCT+TGG + chr8_2:15838899-15838918 Msa1236690:CDS 40.0%
GGCGAATTTATCAGATCCTT+GGG + chr8_2:15838900-15838919 Msa1236690:CDS 40.0%
! TTTAGGATGAAAGATGCCCA+AGG - chr8_2:15838919-15838938 None:intergenic 40.0%
AGCTGTTTGTTTACCATTCC+AGG + chr8_2:15838998-15839017 Msa1236690:intron 40.0%
AGATGATCAACATCCTGGAA+TGG - chr8_2:15839014-15839033 None:intergenic 40.0%
GCATAAGATGATCAACATCC+TGG - chr8_2:15839019-15839038 None:intergenic 40.0%
! CTGCCAAGAAGAATTTTACG+TGG - chr8_2:15839090-15839109 None:intergenic 40.0%
!! TTTGGTTCTCTCTGATGATG+TGG + chr8_2:15839290-15839309 Msa1236690:CDS 40.0%
GGTTGAAACAATTGTGGACA+AGG + chr8_2:15839311-15839330 Msa1236690:CDS 40.0%
GAAACAGACACAAAAGGTGA+CGG + chr8_2:15839438-15839457 Msa1236690:CDS 40.0%
TCTGCGTTCAGCATAAAACT+GGG - chr8_2:15839651-15839670 None:intergenic 40.0%
TTCTGCGTTCAGCATAAAAC+TGG - chr8_2:15839652-15839671 None:intergenic 40.0%
! TGAATGTGTGGAAAGCGTAA+TGG - chr8_2:15839720-15839739 None:intergenic 40.0%
TGACTAACTACGTGAATGTG+TGG - chr8_2:15839732-15839751 None:intergenic 40.0%
AGTTAGTCATTTCGAGCTGT+TGG + chr8_2:15839743-15839762 Msa1236690:three_prime_UTR 40.0%
GACCTGAATTCTGACCATTA+AGG + chr8_2:15840033-15840052 Msa1236690:three_prime_UTR 40.0%
!! CTCTGGGGTTGCAGAAAAAT+GGG - chr8_2:15834169-15834188 None:intergenic 45.0%
TGTTCCTCAGTGAATTGCGA+CGG - chr8_2:15834307-15834326 None:intergenic 45.0%
CAAGCTTCTTCATGATCACC+AGG + chr8_2:15834325-15834344 Msa1236690:CDS 45.0%
TAAGAAGCTAGCTAGGGAGA+TGG + chr8_2:15834661-15834680 Msa1236690:CDS 45.0%
TCGTGGATTTATCGTGCAAC+CGG + chr8_2:15834775-15834794 Msa1236690:CDS 45.0%
GAAAGCTTCGGAATCAATCC+CGG - chr8_2:15834797-15834816 None:intergenic 45.0%
! GGGATTGATTCCGAAGCTTT+CGG + chr8_2:15834796-15834815 Msa1236690:CDS 45.0%
! GGATTGATTCCGAAGCTTTC+GGG + chr8_2:15834797-15834816 Msa1236690:CDS 45.0%
! GATTGATTCCGAAGCTTTCG+GGG + chr8_2:15834798-15834817 Msa1236690:CDS 45.0%
! ATTGATTCCGAAGCTTTCGG+GGG + chr8_2:15834799-15834818 Msa1236690:CDS 45.0%
TGATGAGGAAGGCAAAAGCT+AGG + chr8_2:15834927-15834946 Msa1236690:CDS 45.0%
TCATGAATCTACGGAGACAC+CGG + chr8_2:15834991-15835010 Msa1236690:CDS 45.0%
AGGTGTAAAAAAGCCGGAGT+TGG + chr8_2:15835018-15835037 Msa1236690:CDS 45.0%
AGCTGTTCCTTATCCAACTC+CGG - chr8_2:15835034-15835053 None:intergenic 45.0%
AATCAGAGAAATGGCTAGGC+GGG + chr8_2:15835153-15835172 Msa1236690:CDS 45.0%
TGATGTTGCTATGACTCCGA+AGG + chr8_2:15835459-15835478 Msa1236690:CDS 45.0%
ACGGTCTGTTAAGGAAGCTA+AGG + chr8_2:15835570-15835589 Msa1236690:CDS 45.0%
GACAAAGAATGAGTGCTCGA+AGG + chr8_2:15835834-15835853 Msa1236690:CDS 45.0%
AATGAGTGCTCGAAGGATTC+TGG + chr8_2:15835841-15835860 Msa1236690:CDS 45.0%
TTCTGGTACGGAACCTGTAT+TGG + chr8_2:15835858-15835877 Msa1236690:CDS 45.0%
!! GCTTTAGACCGTCAAGTTGA+TGG + chr8_2:15835904-15835923 Msa1236690:CDS 45.0%
! CTCCTCTGATAGACTTGCTT+TGG - chr8_2:15835938-15835957 None:intergenic 45.0%
ATCGGTGACATCAAAGACTC+TGG + chr8_2:15836096-15836115 Msa1236690:CDS 45.0%
! AAAGACTCTGGTGTTGAACC+TGG + chr8_2:15836108-15836127 Msa1236690:CDS 45.0%
!! ATTGGAGTTGGTGAAGATGG+TGG + chr8_2:15836351-15836370 Msa1236690:CDS 45.0%
!! AAGATGGTGGAGAACTTGAC+TGG + chr8_2:15836364-15836383 Msa1236690:CDS 45.0%
TTGAATGGAGCCATTCATGG+AGG - chr8_2:15836545-15836564 None:intergenic 45.0%
! CACCGTGGTATGATTTTCTC+TGG - chr8_2:15836999-15837018 None:intergenic 45.0%
CAGAGAAAATCATACCACGG+TGG + chr8_2:15836997-15837016 Msa1236690:CDS 45.0%
! AGGAATTCATTTAGGGCCTC+GGG - chr8_2:15837047-15837066 None:intergenic 45.0%
TTGAACCCAGTGAAGAAGGA+TGG + chr8_2:15837101-15837120 Msa1236690:CDS 45.0%
TGAACCCAGTGAAGAAGGAT+GGG + chr8_2:15837102-15837121 Msa1236690:CDS 45.0%
ATGGATGGATCCTGTGAAGT+TGG + chr8_2:15837572-15837591 Msa1236690:CDS 45.0%
TACATGGTGTCTCAGAAGCA+AGG - chr8_2:15837670-15837689 None:intergenic 45.0%
GGGGTTGCATACCATCTTAA+GGG + chr8_2:15837917-15837936 Msa1236690:intron 45.0%
TGCATAAACGAAAACACGGG+TGG - chr8_2:15838132-15838151 None:intergenic 45.0%
GAGAGAGGTGGAAATCTTGA+AGG + chr8_2:15838243-15838262 Msa1236690:CDS 45.0%
AGCGAAACCTCTTTGTGGAT+AGG + chr8_2:15838494-15838513 Msa1236690:CDS 45.0%
GCGAAACCTCTTTGTGGATA+GGG + chr8_2:15838495-15838514 Msa1236690:CDS 45.0%
TGCATACCCTATCCACAAAG+AGG - chr8_2:15838504-15838523 None:intergenic 45.0%
TTGTCTGCTTGAGGAGCTTT+AGG - chr8_2:15838936-15838955 None:intergenic 45.0%
CGAAGAGGTAAATACTCCTG+TGG + chr8_2:15839156-15839175 Msa1236690:intron 45.0%
! GTTGAAGGAGATGGTGTTGA+TGG + chr8_2:15839251-15839270 Msa1236690:intron 45.0%
!!! GGAGATGGTGTTGATGGTTT+TGG + chr8_2:15839257-15839276 Msa1236690:CDS 45.0%
CGCCTTAATGGTCAGAATTC+AGG - chr8_2:15840038-15840057 None:intergenic 45.0%
!! GCTCTGGGGTTGCAGAAAAA+TGG - chr8_2:15834170-15834189 None:intergenic 50.0%
AGTGAATTGCGACGGTTGGT+GGG - chr8_2:15834299-15834318 None:intergenic 50.0%
TGGAGGCTAAGAAGCTAGCT+AGG + chr8_2:15834654-15834673 Msa1236690:CDS 50.0%
GGAGGCTAAGAAGCTAGCTA+GGG + chr8_2:15834655-15834674 Msa1236690:CDS 50.0%
TGTTCAAGGTGAGGAGGAGA+AGG + chr8_2:15834733-15834752 Msa1236690:CDS 50.0%
GTTCAAGGTGAGGAGGAGAA+GGG + chr8_2:15834734-15834753 Msa1236690:CDS 50.0%
CGTGGATTTATCGTGCAACC+GGG + chr8_2:15834776-15834795 Msa1236690:CDS 50.0%
GAGGAAGGCAAAAGCTAGGA+AGG + chr8_2:15834931-15834950 Msa1236690:CDS 50.0%
! TCTACGGAGACACCGGTTAT+AGG + chr8_2:15834998-15835017 Msa1236690:CDS 50.0%
TCCTCGCGCACTCCTATTAA+TGG + chr8_2:15835499-15835518 Msa1236690:CDS 50.0%
GTGCTCGAAGGATTCTGGTA+CGG + chr8_2:15835846-15835865 Msa1236690:CDS 50.0%
! AAGCGGTCTCGGACTTTTGA+AGG - chr8_2:15835888-15835907 None:intergenic 50.0%
! TTGACGGTCTAAAGCGGTCT+CGG - chr8_2:15835899-15835918 None:intergenic 50.0%
!! GACCGTCAAGTTGATGGCTT+TGG + chr8_2:15835910-15835929 Msa1236690:CDS 50.0%
TGGAGAACTTGACTGGATGC+AGG + chr8_2:15836371-15836390 Msa1236690:CDS 50.0%
! TCGGGAATTTTCTCCACGGA+GGG - chr8_2:15837029-15837048 None:intergenic 50.0%
CCTTCCCATCCTTCTTCACT+GGG - chr8_2:15837109-15837128 None:intergenic 50.0%
TCCTTCCCATCCTTCTTCAC+TGG - chr8_2:15837110-15837129 None:intergenic 50.0%
!! CTGTGATGGTGGATGATTGC+AGG + chr8_2:15837434-15837453 Msa1236690:intron 50.0%
CCTCTCTCACAGTAACTGCT+AGG - chr8_2:15838231-15838250 None:intergenic 50.0%
CCTAGCAGTTACTGTGAGAG+AGG + chr8_2:15838228-15838247 Msa1236690:intron 50.0%
AGCAGTTACTGTGAGAGAGG+TGG + chr8_2:15838231-15838250 Msa1236690:intron 50.0%
TGGTTACATTGAGCGCGAAG+AGG + chr8_2:15839141-15839160 Msa1236690:CDS 50.0%
CAGTGAATTGCGACGGTTGG+TGG - chr8_2:15834300-15834319 None:intergenic 55.0%
CCTCAGTGAATTGCGACGGT+TGG - chr8_2:15834303-15834322 None:intergenic 55.0%
CCAACCGTCGCAATTCACTG+AGG + chr8_2:15834300-15834319 Msa1236690:CDS 55.0%
CTAGCTAGGGAGATGGAGAG+TGG + chr8_2:15834668-15834687 Msa1236690:CDS 55.0%
ATTCCGAAGCTTTCGGGGGT+TGG + chr8_2:15834803-15834822 Msa1236690:CDS 55.0%
! GCCATTAATAGGAGTGCGCG+AGG - chr8_2:15835503-15835522 None:intergenic 55.0%
! CTCTGGTGTTGAACCTGGAG+TGG + chr8_2:15836113-15836132 Msa1236690:CDS 55.0%
! CTCGGGAATTTTCTCCACGG+AGG - chr8_2:15837030-15837049 None:intergenic 55.0%
CTCCGTGGAGAAAATTCCCG+AGG + chr8_2:15837028-15837047 Msa1236690:CDS 55.0%
! GGCCTCGGGAATTTTCTCCA+CGG - chr8_2:15837033-15837052 None:intergenic 55.0%
CCCAGTGAAGAAGGATGGGA+AGG + chr8_2:15837106-15837125 Msa1236690:CDS 55.0%
CCACCAACCCCCGAAAGCTT+CGG - chr8_2:15834809-15834828 None:intergenic 60.0%
GAGAAATGGCTAGGCGGGCA+CGG + chr8_2:15835158-15835177 Msa1236690:CDS 60.0%
AGAAATGGCTAGGCGGGCAC+GGG + chr8_2:15835159-15835178 Msa1236690:CDS 60.0%
AGGCGGGCACGGGAAATTGA+AGG + chr8_2:15835169-15835188 Msa1236690:CDS 60.0%
CGGGCACGGGAAATTGAAGG+CGG + chr8_2:15835172-15835191 Msa1236690:CDS 60.0%
GGGCACGGGAAATTGAAGGC+GGG + chr8_2:15835173-15835192 Msa1236690:CDS 60.0%
GGCACGGGAAATTGAAGGCG+GGG + chr8_2:15835174-15835193 Msa1236690:CDS 60.0%
CCGAAGCTTTCGGGGGTTGG+TGG + chr8_2:15834806-15834825 Msa1236690:CDS 65.0%
ACGGAGGGTCCTTTCCACCG+TGG - chr8_2:15837014-15837033 None:intergenic 65.0%
ACGGTGGAAAGGACCCTCCG+TGG + chr8_2:15837013-15837032 Msa1236690:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 15833917 15840124 15833917 ID=Msa1236690;Name=Msa1236690
chr8_2 mRNA 15833917 15840124 15833917 ID=Msa1236690-mRNA-1;Parent=Msa1236690;Name=Msa1236690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=208|0.88|0.8|1|1|1|10|432|1158
chr8_2 exon 15833917 15836591 15833917 ID=Msa1236690-mRNA-1:exon:5929;Parent=Msa1236690-mRNA-1
chr8_2 exon 15836973 15837236 15836973 ID=Msa1236690-mRNA-1:exon:5930;Parent=Msa1236690-mRNA-1
chr8_2 exon 15837504 15837686 15837504 ID=Msa1236690-mRNA-1:exon:5931;Parent=Msa1236690-mRNA-1
chr8_2 exon 15838236 15838318 15838236 ID=Msa1236690-mRNA-1:exon:5932;Parent=Msa1236690-mRNA-1
chr8_2 exon 15838457 15838516 15838457 ID=Msa1236690-mRNA-1:exon:5933;Parent=Msa1236690-mRNA-1
chr8_2 exon 15838855 15838963 15838855 ID=Msa1236690-mRNA-1:exon:5934;Parent=Msa1236690-mRNA-1
chr8_2 exon 15839110 15839162 15839110 ID=Msa1236690-mRNA-1:exon:5935;Parent=Msa1236690-mRNA-1
chr8_2 exon 15839252 15839332 15839252 ID=Msa1236690-mRNA-1:exon:5936;Parent=Msa1236690-mRNA-1
chr8_2 exon 15839429 15839541 15839429 ID=Msa1236690-mRNA-1:exon:5937;Parent=Msa1236690-mRNA-1
chr8_2 exon 15839629 15840124 15839629 ID=Msa1236690-mRNA-1:exon:5938;Parent=Msa1236690-mRNA-1
chr8_2 five_prime_UTR 15833917 15834124 15833917 ID=Msa1236690-mRNA-1:five_prime_utr;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15834125 15836591 15834125 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15836973 15837236 15836973 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15837504 15837686 15837504 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15838236 15838318 15838236 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15838457 15838516 15838457 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15838855 15838963 15838855 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15839110 15839162 15839110 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15839252 15839332 15839252 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15839429 15839541 15839429 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 CDS 15839629 15839692 15839629 ID=Msa1236690-mRNA-1:cds;Parent=Msa1236690-mRNA-1
chr8_2 three_prime_UTR 15839693 15840124 15839693 ID=Msa1236690-mRNA-1:three_prime_utr;Parent=Msa1236690-mRNA-1
Gene Sequence

>Msa1236690

ATGGACATTCTCAACTTTTCACCCCCCAAAACTATTTCATACCCATTTTTCTGCAACCCCAGAGCTTTATATTCATCAAACCGTAACACCCCATTTCACAAAAACACTTTTTCTTTCTATCTAACAACTTCAACTTCAAGAAAGTTTCAAATTTTGGCTCATTTTCGACGACCCACCAACCGTCGCAATTCACTGAGGAACAAGCTTCTTCATGATCACCAGGTAAGTAGAATTCACATTCCCAATGACCCTTCTTCTGTTTCTAGTAATCATATTGAAGAAATTGATGATGGTAGTTTTGTTGAATTGGAAAAACTACAAAAATCTGAACTTTTGGGTGAAAATGTTTTGTTGAATAAATTGGAGAATTGGGTTGATAAGTATAAGGAAGATGTTGATTTTTGGGGTATTGGGTCTGCTCCTATTTTTACTGTTTATCAAGATTCATTTGGTGGTGTTAAGAGGGTTTTAGTTGATGAAGATGAGATTTTGAAAAGAGTTGGTGGAAATGAAATAGAGGATAAGATTTTGGAGGCTAAGAAGCTAGCTAGGGAGATGGAGAGTGGTGAAAATGTGATTGCAAGGAATAGTTCTGTGGCTAAGTTTATTGTTCAAGGTGAGGAGGAGAAGGGTGATTTTGTTAAGGCTGTTCGTGGATTTATCGTGCAACCGGGATTGATTCCGAAGCTTTCGGGGGTTGGTGGCATAGTATTGTGTGTTTTTGTTGTTATGTTTGGAGTGAAGAAGTTATTTCGTGTTGGTGATAAGGAGATTCGGTATACAGAAATGGAGAAGAAAATTATGATGAGGAAGGCAAAAGCTAGGAAGGAGAAAGAGATGTTGATGAAGGGTGCTATTGAAGTTATTCATGAATCTACGGAGACACCGGTTATAGGTGTAAAAAAGCCGGAGTTGGATAAGGAACAGCTTATGAACAATATTCTAAAAGCTAAGACTTCTTCTGATAAACTTGTAGTTCAGAATTCTTCTGGTGAAGTGAGAATGGATATGGACTATAAGGTTCGAGAAATCAGAGAAATGGCTAGGCGGGCACGGGAAATTGAAGGCGGGGATCGTTCTCTAGTTAGTAAGGATATGGAAATGGATGACAGTGTGATTGGGAAGTCCTATAATGAGAGTGAAGTCATAAAAGAGAATAGCAAACAAGATAACAGTTTAAGTAACCGTCAAAATGAAGTTGCAAGCAAAACAACGGATAATAATGGAATTCTGCACACAACTTCTGATGATATCACAGAGAAGGTTGATATTTCAACCAAGCATGAGATTGTTCGTGATGATAGAGAAATTGGTAAAGAGGAAATCAAAATCAATGATGTTGCTATGACTCCGAAGGACAGAGAAGACAATAAATCCTCGCGCACTCCTATTAATGGCTCATTTATGACAAATAAAAGTTCAGTGAACAAGAAACCAAGGATCATACGGTCTGTTAAGGAAGCTAAGGATTATCTTTCAAAAAAACACGACAAAGAAAATCCTGATGCAAAATCTGGAATTGAACTTGGGAAAGAAAACATGGCTGATTCAAAGCCTTCCGAATTTGTTGTTTTTAACGACCAGAAGCAGAAAAATTTGGAGACGAACACAGTCGTGTCCAGAAGTGACACATTAAATGGATTGTCATATTCTAAGCCCAACCAAAATGCCAGTGAAGATTCTAATCAAAAGGAAAGGGAAAAGAGCTCGACAAAGAATGAGTGCTCGAAGGATTCTGGTACGGAACCTGTATTGGAAGACCTTCAAAAGTCCGAGACCGCTTTAGACCGTCAAGTTGATGGCTTTGGTTCCAAAGCAAGTCTATCAGAGGAGAAAAGCTTCACTGAAGTTGAGCCAATAATTAAACAAATCAGGAATGATGATACTTTAAATATGAAATCAGATTCTAGGCCTGACCTAAATCCTAGTGAAGATTCTGATCAGAAGGATAAGAAATTCGGCCCAACAAAGATCGGTGACATCAAAGACTCTGGTGTTGAACCTGGAGTGGTAATTCGTCAAAATTCTGAGACCACTTCAGACCATGAAGTTAATGGTGATAGTAGAAAGAAAAGATTTTCTGGAAAGACAGAAAATTGGCTGGAGAAAAATTTCCATGAAGTTGAGCCTATAATTAAGAAAATTAGAGCTGGATTTCAAGATAACTATGCACTTGCAAAAGAGAGAGTTGATCAACCTTTAGATATACCAACTGAGATGGAATCAATTGGAGTTGGTGAAGATGGTGGAGAACTTGACTGGATGCAGGATGATCATCTTAGAGACATTGTCTTTCGAGTTCGTGATAATGAATTGTGTGGACGAGAACCATTTTATTTGATGAACGACGAAGATAAAGATGCTTTCTTCAAAGGTCTTGAGAAAAAAGTTGACATAGAAAACAAAAAACTTTCTCACCTCCATGAATGGCTCCATTCAAATATTGAAAATATTGATTACGGAGCAGATGGCATTAGTATATATGATTCACCAGAGAAAATCATACCACGGTGGAAAGGACCCTCCGTGGAGAAAATTCCCGAGGCCCTAAATGAATTCCTAGATAAAAAAAGAAAGACAACTTCCACCAAAAATTTGAACCCAGTGAAGAAGGATGGGAAGGACTCTGCTAAAAAATCATCCGATTCATCTTCAAAAGTAAAGGTTGATGGTTCAATAGGCCCGATGAAGAAGTCAAAAAATCCAAAGACTGTTGTTGAAGGAAGTGATGGAATAAGTGTTTTTTGGTTGTCAAGAATGGGTGGCAGTAGCTCAAAATCAAAAGTAGCAGAAAATATCATGGATGGATCCTGTGAAGTTGGCAAAGATAAGAATCTACCTTCAGAAGTAAAAGAAAATGACCTTAATAATTCTTGTTCTGAAGATTTTTCTATCCTTGCTTCTGAGACACCATTTACTGTGAGAGAGGTGGAAATCTTGAAGGAGTTGTACAAAAAATTAAGCAGAGTTATTGTGAAAAATGGACTTATTCAAAAGGAAGAGCTTCACTTTGCTCTTTTTAGAAACGGAAACAAGCGAAACCTCTTTGTGGATAGGATGTTTGATCTCTTCGATGTCAATAACAACGGCCATATAGAGTTTGGCGAATTTATCAGATCCTTGGGCATCTTTCATCCTAAAGCTCCTCAAGCAGACAAAATAATATATGCATTTAGATTATATGACTTGAGGCATACTGGTTACATTGAGCGCGAAGAGTTGAAGGAGATGGTGTTGATGGTTTTGGTTGAATCTGATTTGGTTCTCTCTGATGATGTGGTTGAAACAATTGTGGACAAGACATTTCTAGAAACAGACACAAAAGGTGACGGAAAAATTGACTTCGAAGAATGGAGTGAATATGTTGGAAAGAATCCATCATTACTCAAGAACATGACTCTACCTTATCTAATGGACATAACTCTAGCATTTCCCAGTTTTATGCTGAACGCAGAAACCGAAGAATCACACTCGTAG
Protein sequence

>Msa1236690

MDILNFSPPKTISYPFFCNPRALYSSNRNTPFHKNTFSFYLTTSTSRKFQILAHFRRPTNRRNSLRNKLLHDHQVSRIHIPNDPSSVSSNHIEEIDDGSFVELEKLQKSELLGENVLLNKLENWVDKYKEDVDFWGIGSAPIFTVYQDSFGGVKRVLVDEDEILKRVGGNEIEDKILEAKKLAREMESGENVIARNSSVAKFIVQGEEEKGDFVKAVRGFIVQPGLIPKLSGVGGIVLCVFVVMFGVKKLFRVGDKEIRYTEMEKKIMMRKAKARKEKEMLMKGAIEVIHESTETPVIGVKKPELDKEQLMNNILKAKTSSDKLVVQNSSGEVRMDMDYKVREIREMARRAREIEGGDRSLVSKDMEMDDSVIGKSYNESEVIKENSKQDNSLSNRQNEVASKTTDNNGILHTTSDDITEKVDISTKHEIVRDDREIGKEEIKINDVAMTPKDREDNKSSRTPINGSFMTNKSSVNKKPRIIRSVKEAKDYLSKKHDKENPDAKSGIELGKENMADSKPSEFVVFNDQKQKNLETNTVVSRSDTLNGLSYSKPNQNASEDSNQKEREKSSTKNECSKDSGTEPVLEDLQKSETALDRQVDGFGSKASLSEEKSFTEVEPIIKQIRNDDTLNMKSDSRPDLNPSEDSDQKDKKFGPTKIGDIKDSGVEPGVVIRQNSETTSDHEVNGDSRKKRFSGKTENWLEKNFHEVEPIIKKIRAGFQDNYALAKERVDQPLDIPTEMESIGVGEDGGELDWMQDDHLRDIVFRVRDNELCGREPFYLMNDEDKDAFFKGLEKKVDIENKKLSHLHEWLHSNIENIDYGADGISIYDSPEKIIPRWKGPSVEKIPEALNEFLDKKRKTTSTKNLNPVKKDGKDSAKKSSDSSSKVKVDGSIGPMKKSKNPKTVVEGSDGISVFWLSRMGGSSSKSKVAENIMDGSCEVGKDKNLPSEVKENDLNNSCSEDFSILASETPFTVREVEILKELYKKLSRVIVKNGLIQKEELHFALFRNGNKRNLFVDRMFDLFDVNNNGHIEFGEFIRSLGIFHPKAPQADKIIYAFRLYDLRHTGYIEREELKEMVLMVLVESDLVLSDDVVETIVDKTFLETDTKGDGKIDFEEWSEYVGKNPSLLKNMTLPYLMDITLAFPSFMLNAETEESHS*