AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1236880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236880 MtrunA17_Chr8g0347491 96.660 1078 27 4 55 1130 1 1071 0.0 2075
Msa1236880 MtrunA17_Chr7g0249941 55.474 1096 334 29 77 1130 29 1012 0.0 891
Msa1236880 MtrunA17_Chr4g0045881 64.946 465 144 6 677 1126 428 888 0.0 587
Msa1236880 MtrunA17_Chr5g0401291 60.771 441 158 7 676 1108 455 888 4.85e-169 522
Msa1236880 MtrunA17_Chr4g0054001 58.174 471 181 7 669 1130 394 857 1.35e-168 519
Msa1236880 MtrunA17_Chr1g0192111 53.941 406 172 7 685 1084 497 893 4.82e-130 419
Msa1236880 MtrunA17_Chr4g0023611 46.998 483 215 10 676 1126 393 866 3.69e-119 389
Msa1236880 MtrunA17_Chr2g0319201 49.034 414 193 7 683 1084 393 800 4.51e-114 375
Msa1236880 MtrunA17_Chr2g0323071 46.506 415 199 8 683 1084 316 720 1.88e-105 349
Msa1236880 MtrunA17_Chr5g0414941 40.647 433 220 10 682 1085 411 835 1.65e-89 307
Msa1236880 MtrunA17_Chr8g0364331 41.121 428 215 13 685 1085 309 726 2.75e-87 298
Msa1236880 MtrunA17_Chr3g0118231 38.142 409 235 8 682 1084 245 641 7.74e-76 265
Msa1236880 MtrunA17_Chr4g0074091 27.200 375 233 8 685 1052 792 1133 2.58e-33 140
Msa1236880 MtrunA17_Chr4g0061111 26.440 382 233 10 686 1055 1171 1516 5.15e-32 135
Msa1236880 MtrunA17_Chr1g0150261 24.862 362 227 7 680 1031 1359 1685 8.16e-30 129
Msa1236880 MtrunA17_Chr3g0091511 25.000 356 223 8 686 1031 1584 1905 1.67e-28 124
Msa1236880 MtrunA17_Chr5g0409151 23.963 217 131 3 817 1031 2 186 2.23e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1236880 AT3G25500.1 74.174 484 110 5 643 1119 551 1026 0.0 719
Msa1236880 AT2G43800.1 62.791 430 139 6 676 1095 438 856 4.28e-178 545
Msa1236880 AT5G67470.1 56.879 487 180 8 652 1127 420 887 1.27e-165 513
Msa1236880 AT3G05470.1 52.048 415 170 8 684 1084 469 868 7.44e-125 405
Msa1236880 AT5G54650.2 45.342 483 225 9 614 1084 391 846 1.45e-111 369
Msa1236880 AT5G54650.1 45.342 483 225 9 614 1084 391 846 1.45e-111 369
Msa1236880 AT5G48360.1 46.224 437 170 9 652 1086 409 782 8.07e-108 356
Msa1236880 AT3G07540.1 42.299 435 202 6 653 1084 446 834 1.98e-87 301
Msa1236880 AT1G70140.1 38.086 491 253 14 667 1128 290 758 1.09e-83 289
Msa1236880 AT3G25493.1 71.186 118 34 0 1002 1119 31 148 3.28e-54 186
Msa1236880 AT1G24150.2 42.922 219 104 6 685 893 312 519 3.80e-43 166
Msa1236880 AT5G07740.1 26.121 379 235 7 683 1052 1244 1586 3.23e-33 140
Msa1236880 AT5G07740.3 26.121 379 235 7 683 1052 1222 1564 3.58e-33 140
Msa1236880 AT1G31810.2 24.074 378 244 7 683 1052 816 1158 1.03e-28 125
Msa1236880 AT1G31810.1 24.074 378 244 7 683 1052 816 1158 1.03e-28 125
Msa1236880 AT5G07740.2 24.939 413 231 10 683 1052 1244 1620 1.40e-28 125
Msa1236880 AT5G07770.3 24.403 377 229 9 686 1052 199 529 7.09e-26 115
Msa1236880 AT5G07770.1 24.403 377 229 9 686 1052 192 522 8.55e-26 115
Msa1236880 AT5G07770.4 24.403 377 229 9 686 1052 58 388 3.33e-25 112
Msa1236880 AT5G07770.2 23.611 360 220 8 703 1052 181 495 2.50e-22 103
Msa1236880 AT3G32400.2 23.038 395 246 10 648 1031 69 416 5.53e-22 101
Msa1236880 AT5G07760.1 23.684 304 199 5 750 1052 523 794 7.47e-21 99.8
Msa1236880 AT5G07760.2 23.684 304 199 5 750 1052 523 794 9.40e-21 99.4
Msa1236880 AT2G25050.1 21.798 445 269 13 680 1084 739 1144 1.40e-20 99.0
Msa1236880 AT5G07650.2 24.199 281 182 4 751 1031 470 719 8.68e-19 92.8
Msa1236880 AT5G07780.1 22.849 372 225 11 682 1036 74 400 8.85e-17 85.1
Msa1236880 AT3G32400.1 25.267 281 178 8 648 911 61 326 4.87e-16 82.8
Msa1236880 AT5G07650.1 22.951 305 180 5 751 1031 470 743 9.34e-16 83.2

Find 278 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGAATTTCAGCTGAAAATT+TGG 0.130239 8_2:-16098111 Msa1236880:CDS
TAACATGAGATGGTAAAATT+TGG 0.159908 8_2:+16099120 None:intergenic
TCTCCAGCGATGATTCTTTC+TGG 0.169261 8_2:+16097825 None:intergenic
CAGACACCTAACTGCATATT+TGG 0.185975 8_2:+16094522 None:intergenic
TGAGGGGTATGTAGGGAAAA+AGG 0.214194 8_2:+16098709 None:intergenic
CTCAAGCTGGTTGACGTTAA+AGG 0.220743 8_2:-16095328 Msa1236880:CDS
TGAAGGTGGTGGTGGGGTTG+AGG 0.222154 8_2:+16098691 None:intergenic
CTTGGTTCATTTGATGAGAT+TGG 0.241923 8_2:+16098887 None:intergenic
TTGAAGCTTCAACAAAATTA+AGG 0.248025 8_2:-16094578 Msa1236880:three_prime_UTR
CTCCACTTCAGATTCAAAAT+TGG 0.253331 8_2:+16095606 None:intergenic
ACTGGAGAAACCAATGTATT+TGG 0.257163 8_2:+16097120 None:intergenic
GGTGGTGGTGGCGGTGGTGG+TGG 0.265460 8_2:+16097282 None:intergenic
GTAGTAGAAAATGGGTATTT+TGG 0.269771 8_2:+16098767 None:intergenic
CATCAAAATCACCTGGTTAA+AGG 0.274808 8_2:+16094443 None:intergenic
CACCGCCGCAACCAGCTTCT+AGG 0.283505 8_2:-16097449 Msa1236880:CDS
GACTTTGGTTGTGATCTTCT+TGG 0.293641 8_2:+16097978 None:intergenic
GGTGGTGGTGGTGGCGGTGG+TGG 0.297185 8_2:+16097279 None:intergenic
ACTTCTTAACAGTTCTTGAT+AGG 0.298082 8_2:-16094826 Msa1236880:CDS
GGTTGATGAAGGAATCTTCT+TGG 0.301229 8_2:+16098869 None:intergenic
AAAATCCTTGTAAAAGATTT+GGG 0.302784 8_2:-16094358 Msa1236880:three_prime_UTR
CTAGAGGCTGTGCTCAAAAC+TGG 0.304797 8_2:-16095412 Msa1236880:CDS
ACTCTACTAGAAGGTGTAAT+TGG 0.308943 8_2:+16097315 None:intergenic
GAAGAAGAAGATGAAGTGTT+AGG 0.310041 8_2:+16098740 None:intergenic
AAACAATTCAAATGGCAAAT+TGG 0.312680 8_2:-16094239 Msa1236880:three_prime_UTR
CTAGAAGCTGGTTGCGGCGG+TGG 0.314053 8_2:+16097450 None:intergenic
ATTCAACAATTGGTGTTAAC+AGG 0.316607 8_2:+16097406 None:intergenic
ATGCTTCCACAACCACTTCC+TGG 0.318071 8_2:-16094725 Msa1236880:CDS
TGATACATAACCTTCATAAA+AGG 0.321299 8_2:+16094276 None:intergenic
AATGGCGACGGCGAGAAGTT+TGG 0.325972 8_2:+16098589 None:intergenic
TTGCGCTCTTCTTCCTTGCT+TGG 0.329564 8_2:+16095745 None:intergenic
CAATGCAAAGGCTTCAACTT+TGG 0.331536 8_2:+16097054 None:intergenic
ACTACCATGAAGATTCTAAA+TGG 0.334807 8_2:+16094854 None:intergenic
GAAGGTGGTGGTGGGGTTGA+GGG 0.335139 8_2:+16098692 None:intergenic
GGAGTAGCATCCTTTGGTTT+TGG 0.338452 8_2:+16096685 None:intergenic
ACGGAAATGGGTCGGGTTCT+CGG 0.342408 8_2:-16098145 Msa1236880:CDS
AGAGGTTCTTTAAACGGAAA+TGG 0.343572 8_2:-16098158 Msa1236880:CDS
GGTGGTGGCGGTGGTGGTGG+AGG 0.346800 8_2:+16097285 None:intergenic
TTGGTCAACCGGTGGTTTGT+AGG 0.347205 8_2:-16097191 Msa1236880:CDS
TCAGCAGAACCGAGTTTGTT+TGG 0.349669 8_2:+16095697 None:intergenic
ATGAAGGTTATGTATCATAA+TGG 0.351440 8_2:-16094270 Msa1236880:three_prime_UTR
TAGAAGCTGGTTGCGGCGGT+GGG 0.356702 8_2:+16097451 None:intergenic
AAGGTGGTGGTGGGGTTGAG+GGG 0.359462 8_2:+16098693 None:intergenic
AAGTTTGGAAGAAGATGATT+TGG 0.367500 8_2:+16098604 None:intergenic
TCATCCATTTAGAATCTTCA+TGG 0.368202 8_2:-16094858 Msa1236880:CDS
AACAACTCCTGTTGGTCAAC+CGG 0.373070 8_2:-16097202 Msa1236880:CDS
TTCCGATCGTGAAATGGTTT+GGG 0.375123 8_2:-16097013 Msa1236880:CDS
TCATCTCCTTAGCGCATGTT+TGG 0.375341 8_2:-16094659 Msa1236880:exon
AGCATAGGGTTCACTGGAAC+AGG 0.375806 8_2:+16094743 None:intergenic
TCTCCAAGAGGTTCTTTAAA+CGG 0.382395 8_2:-16098164 Msa1236880:CDS
GTTCCGATCGTGAAATGGTT+TGG 0.383673 8_2:-16097014 Msa1236880:CDS
ACAGTTGGTGATTCAACAAT+TGG 0.390675 8_2:+16097396 None:intergenic
AACATGAGATGGTAAAATTT+GGG 0.393475 8_2:+16099121 None:intergenic
AAGAAGAAGATGAAGTGTTA+GGG 0.393658 8_2:+16098741 None:intergenic
CATTGCTTCCGCTGCTTCAT+CGG 0.394401 8_2:+16097240 None:intergenic
GGTGGGGTTGAGGGGTATGT+AGG 0.396440 8_2:+16098701 None:intergenic
GAAGAAGGTGAAGGTGGTGG+TGG 0.397218 8_2:+16098683 None:intergenic
CGTGGAGCTGGTGGTGGTGG+TGG 0.400250 8_2:-16098323 Msa1236880:CDS
AAACTAGGTGGCAACTCAAC+TGG 0.402014 8_2:+16097102 None:intergenic
TAACAAACTTTCAAGTAGTT+CGG 0.403932 8_2:+16095777 None:intergenic
GGGTCATGGAGGGTGCATTA+TGG 0.412702 8_2:-16094420 Msa1236880:three_prime_UTR
GAAGCTGGTTGCGGCGGTGG+GGG 0.414519 8_2:+16097453 None:intergenic
GCAAGTGGAGGTGGTGGTGG+TGG 0.414860 8_2:+16097267 None:intergenic
AGTGGAGGTGGTGGTGGTGG+TGG 0.415651 8_2:+16097270 None:intergenic
CAGAATTAAAACCTCCTTCA+AGG 0.417513 8_2:-16097164 Msa1236880:CDS
AACCATTTCACGATCGGAAC+TGG 0.417864 8_2:+16097017 None:intergenic
CAACCACTTCCTGGATTACA+TGG 0.421232 8_2:-16094716 Msa1236880:CDS
GTTAGAGATGAAATGTTAGC+TGG 0.426511 8_2:+16098647 None:intergenic
TCTATCTATTAATAGCTCAT+TGG 0.427705 8_2:+16094200 None:intergenic
TTCATCTTCTTCTGCTTCAC+CGG 0.429921 8_2:-16098045 Msa1236880:CDS
GAGTGATGAAGGAAGAGAGA+AGG 0.432193 8_2:+16099031 None:intergenic
AGAAGCTGGTTGCGGCGGTG+GGG 0.432904 8_2:+16097452 None:intergenic
GAGAGAGTAGAGAGTGATGA+AGG 0.433001 8_2:+16099020 None:intergenic
AATGGTGGTGCTAATGTTAC+AGG 0.433893 8_2:-16098215 Msa1236880:CDS
GAACGTGGAGTAGCATCCTT+TGG 0.434256 8_2:+16096679 None:intergenic
AAAGTTGAAGCCTTTGCATT+GGG 0.434876 8_2:-16097052 Msa1236880:CDS
GGCGGTAACGGCTGTAGCTC+CGG 0.439758 8_2:+16098272 None:intergenic
CTTCTTCACATTCGCTAGAT+CGG 0.443176 8_2:+16095141 None:intergenic
GGAAGAAGAGCGCAAATTGA+AGG 0.444590 8_2:-16095737 Msa1236880:CDS
CCACGTGGAGCTGGTGGTGG+TGG 0.445065 8_2:-16098326 Msa1236880:CDS
ACAATTGGTGTTAACAGGTC+AGG 0.445562 8_2:+16097411 None:intergenic
TGAATCACAAAAGGCCTTGA+AGG 0.448329 8_2:+16097150 None:intergenic
GAGGTTCTTTAAACGGAAAT+GGG 0.448607 8_2:-16098157 Msa1236880:CDS
AAATGGTTTGGGATCATTTG+AGG 0.449038 8_2:-16097002 Msa1236880:CDS
GGCCAGTTCCGATCGTGAAA+TGG 0.449603 8_2:-16097019 Msa1236880:CDS
ATTGCAAGTGGAGGTGGTGG+TGG 0.449780 8_2:+16097264 None:intergenic
TCTTTAAACGGAAATGGGTC+GGG 0.449904 8_2:-16098152 Msa1236880:CDS
GTAATTGGTGTTGAAAGAAC+AGG 0.452574 8_2:+16097330 None:intergenic
AGTGATGAAGGAAGAGAGAA+GGG 0.453293 8_2:+16099032 None:intergenic
ATGAATCTTCATAGCAATCA+TGG 0.453942 8_2:-16097603 Msa1236880:CDS
TTTGGATTTGGTGATGGAGG+TGG 0.455463 8_2:+16098785 None:intergenic
ATTGAATCAGACGGCGGGAT+CGG 0.458070 8_2:-16095035 Msa1236880:CDS
AATCAATGAACAAGTTTATG+AGG 0.460163 8_2:-16094988 Msa1236880:CDS
GCGATTCCAAATATGCAGTT+AGG 0.463427 8_2:-16094528 Msa1236880:three_prime_UTR
CAAAGTTGAAGCCTTTGCAT+TGG 0.465268 8_2:-16097053 Msa1236880:CDS
AAGACCAAGTCTTCTGCACT+TGG 0.465976 8_2:+16095186 None:intergenic
ATGGAGGGTGCATTATGGTC+TGG 0.468346 8_2:-16094415 Msa1236880:three_prime_UTR
TTTCCGTTTAAAGAACCTCT+TGG 0.468902 8_2:+16098161 None:intergenic
GAAGTCTCTAAACTTTCAAA+AGG 0.468986 8_2:-16095085 Msa1236880:CDS
CAAACCACCGGTTGACCAAC+AGG 0.469210 8_2:+16097195 None:intergenic
TGTCGCACAAGCGGCGGTAA+CGG 0.472296 8_2:+16098260 None:intergenic
AAGAAGGTGAAGGTGGTGGT+GGG 0.477077 8_2:+16098684 None:intergenic
AGCTCGGAGTTTCTTTACCT+TGG 0.477910 8_2:-16098386 Msa1236880:CDS
AATGATAGAAACATTATTTG+TGG 0.478939 8_2:-16096722 Msa1236880:CDS
AAAGAAAAGAAAGGAGAAGT+GGG 0.480272 8_2:+16099066 None:intergenic
TCTGAAACATCAGAAATTGT+TGG 0.480351 8_2:+16097567 None:intergenic
TTCTTTAAACGGAAATGGGT+CGG 0.480385 8_2:-16098153 Msa1236880:CDS
GAAAGAAGCGTTGGTGAAAG+TGG 0.482301 8_2:+16097513 None:intergenic
CCACCAGCTCCACGTGGATC+AGG 0.484408 8_2:+16098332 None:intergenic
GGAGCTGAAACTCTACTAGA+AGG 0.484946 8_2:+16097306 None:intergenic
AACCAGCTTCTAGGAAGCAT+TGG 0.485263 8_2:-16097440 Msa1236880:CDS
GGAGGAGTTTGAATCACAAA+AGG 0.486460 8_2:+16097141 None:intergenic
GGTGATGGAGGTGGTGATGA+AGG 0.487698 8_2:+16098794 None:intergenic
GTGGGGTTGAGGGGTATGTA+GGG 0.489242 8_2:+16098702 None:intergenic
GAAAGAAAAGAAAGGAGAAG+TGG 0.490386 8_2:+16099065 None:intergenic
ACTTCGAGCGGTTAATGTTA+CGG 0.497276 8_2:-16096587 Msa1236880:CDS
ATCGGCATTGCAAGTGGAGG+TGG 0.498071 8_2:+16097258 None:intergenic
TTCTCGATTTAGCGACGGTA+GGG 0.498089 8_2:+16098423 None:intergenic
TGTGTACAAAACAATTCAAA+TGG 0.498596 8_2:-16094247 Msa1236880:three_prime_UTR
TGTAATCCAGGAAGTGGTTG+TGG 0.499250 8_2:+16094719 None:intergenic
CTTCTTAACAGTTCTTGATA+GGG 0.499816 8_2:-16094825 Msa1236880:CDS
ACTCAATCTTGTAATGAAGA+TGG 0.500417 8_2:-16097723 Msa1236880:CDS
CTACCTGATCCACGTGGAGC+TGG 0.501892 8_2:-16098335 Msa1236880:CDS
AGAAATGAGAAAGAAAAGAA+AGG 0.502725 8_2:+16099057 None:intergenic
CGATCTAGCGAATGTGAAGA+AGG 0.502743 8_2:-16095140 Msa1236880:CDS
ACCCTATCCTCGTGACTTGG+AGG 0.502964 8_2:+16096646 None:intergenic
GGTTGACCAACAGGAGTTGT+TGG 0.504807 8_2:+16097204 None:intergenic
AAACCCTTACTTAAAAGAGC+TGG 0.505939 8_2:+16096978 None:intergenic
GACAGCGACGGCGGCGATGA+CGG 0.508417 8_2:+16098562 None:intergenic
ACCAGCTTCTAGGAAGCATT+GGG 0.509100 8_2:-16097439 Msa1236880:CDS
GACGTTTACTTTGCCATCGC+CGG 0.510110 8_2:-16097640 Msa1236880:CDS
GGCAAATTGGAGACACCACT+TGG 0.511007 8_2:-16094226 Msa1236880:three_prime_UTR
ACTGGGAACCGCATGAATGT+TGG 0.511036 8_2:-16095394 Msa1236880:CDS
TTTCCATGTAATCCAGGAAG+TGG 0.512207 8_2:+16094713 None:intergenic
AATACCCTATCCTCGTGACT+TGG 0.513434 8_2:+16096643 None:intergenic
TCTTCATTCTCCTCAAAACT+AGG 0.514159 8_2:+16097087 None:intergenic
AAGTCACGAGGATAGGGTAT+TGG 0.515638 8_2:-16096641 Msa1236880:CDS
TCCCAATGCTTCCTAGAAGC+TGG 0.515895 8_2:+16097438 None:intergenic
AATTTCAGCTGAAAATTTGG+TGG 0.515903 8_2:-16098108 Msa1236880:CDS
CGATGAAGCAGCGGAAGCAA+TGG 0.518498 8_2:-16097239 Msa1236880:CDS
GGCGGCGATGACGGCAGTAA+TGG 0.519032 8_2:+16098571 None:intergenic
TCAAACTCCTCCAAATACAT+TGG 0.521809 8_2:-16097130 Msa1236880:CDS
TGTCTCTTTCCATGTAATCC+AGG 0.522444 8_2:+16094707 None:intergenic
GGAAGTGGTTGTGGAAGCAT+AGG 0.525174 8_2:+16094728 None:intergenic
AGTAGTGGCTGTGTCGGTGC+CGG 0.525966 8_2:+16097936 None:intergenic
CAAGAAATCATTAGAACAGA+AGG 0.526066 8_2:-16095268 Msa1236880:CDS
GATGCCAAGTGCAGAAGACT+TGG 0.528209 8_2:-16095190 Msa1236880:CDS
TGTGGAAGCATAGGGTTCAC+TGG 0.528253 8_2:+16094737 None:intergenic
AGCGGTTAATGTTACGGTAG+AGG 0.530275 8_2:-16096581 Msa1236880:CDS
AAACGTTTCTTCTACTAGCT+CGG 0.533701 8_2:-16098402 Msa1236880:CDS
TTCGATCAGTCTCTCTCCAC+CGG 0.533928 8_2:-16098012 Msa1236880:CDS
AAGGAAGAAGGTGAAGGTGG+TGG 0.534529 8_2:+16098680 None:intergenic
TGGTAAAATTTGGGTAATGG+TGG 0.534827 8_2:+16099130 None:intergenic
CACCTCCAAGTCACGAGGAT+AGG 0.534967 8_2:-16096648 Msa1236880:CDS
GCTTGATACACTTCTCAAGC+TGG 0.535039 8_2:-16095341 Msa1236880:CDS
ACCTCCAAGTCACGAGGATA+GGG 0.535294 8_2:-16096647 Msa1236880:CDS
AATGAACAAGTTTATGAGGA+TGG 0.535360 8_2:-16094984 Msa1236880:CDS
CCATTCTGATTCAAAACAGT+TGG 0.535974 8_2:+16097381 None:intergenic
AGATGGTAAAATTTGGGTAA+TGG 0.537096 8_2:+16099127 None:intergenic
TTAGTGTCACTGTGACATCT+TGG 0.537792 8_2:-16094490 Msa1236880:three_prime_UTR
GATGAAGCAGCGGAAGCAAT+GGG 0.538647 8_2:-16097238 Msa1236880:CDS
TGTGAAGAAGGCCGCGACAA+TGG 0.539842 8_2:-16095128 Msa1236880:CDS
GGAAAGAAGAGAGTGTGAAA+AGG 0.539959 8_2:+16099087 None:intergenic
TTTGTGGAAAAGGTTGATGA+AGG 0.542138 8_2:+16098858 None:intergenic
ACAGGTGTTACTGATACACT+TGG 0.542268 8_2:-16095802 Msa1236880:intron
TGCTTCATCGGCATTGCAAG+TGG 0.544224 8_2:+16097252 None:intergenic
GATAGGGTATGCAAAGAAGT+TGG 0.544955 8_2:-16094809 Msa1236880:CDS
GGAGAAACCAATGTATTTGG+AGG 0.546058 8_2:+16097123 None:intergenic
GCAAAGGAAGAAGGTGAAGG+TGG 0.547065 8_2:+16098677 None:intergenic
TCTATGAGCAGAACTAATCA+TGG 0.548946 8_2:+16094769 None:intergenic
TGTTTCTCAGAGAAAACAAT+GGG 0.549128 8_2:-16097358 Msa1236880:CDS
CAATTTCTGATGTTTCAGAT+CGG 0.552148 8_2:-16097563 Msa1236880:CDS
AATTGGGTGCAGGTTGAATG+AGG 0.552324 8_2:-16096746 Msa1236880:intron
GATCCACGTGGAGCTGGTGG+TGG 0.552606 8_2:-16098329 Msa1236880:CDS
AGAAGGTGAAGGTGGTGGTG+GGG 0.552621 8_2:+16098685 None:intergenic
TGCTTCCTAGAAGCTGGTTG+CGG 0.553741 8_2:+16097444 None:intergenic
ACCAACGCTTCTTTCGTCGC+CGG 0.554767 8_2:-16097505 Msa1236880:CDS
TTAGAGATGAAATGTTAGCT+GGG 0.555490 8_2:+16098648 None:intergenic
TTACCGCCGCTTGTGCGACA+AGG 0.555576 8_2:-16098257 Msa1236880:CDS
GGCATTGCAAGTGGAGGTGG+TGG 0.556796 8_2:+16097261 None:intergenic
CTTTACCTCTAGAGTCTGAA+AGG 0.557119 8_2:+16095570 None:intergenic
GGAAGTGTGTGAAGCACTGT+TGG 0.558493 8_2:-16096560 Msa1236880:CDS
CCACTACTTGTTAGTGACGT+TGG 0.559784 8_2:-16097921 Msa1236880:CDS
GGGAATGAAGCAAAGGAAGA+AGG 0.563340 8_2:+16098668 None:intergenic
ATCCCAAACCATTTCACGAT+CGG 0.564571 8_2:+16097011 None:intergenic
ATTTCAGCTGAAAATTTGGT+GGG 0.564635 8_2:-16098107 Msa1236880:CDS
GGTGGTGATGAAGGAGGTGA+TGG 0.564813 8_2:+16098803 None:intergenic
TAGAGGCTGTGCTCAAAACT+GGG 0.565113 8_2:-16095411 Msa1236880:CDS
AGAAGAAGATGAAGTGTTAG+GGG 0.566225 8_2:+16098742 None:intergenic
ATCCGTCTCTTCCCTCGCGA+CGG 0.568055 8_2:-16098452 Msa1236880:CDS
GTAAAATTGAATCAGACGGC+GGG 0.568789 8_2:-16095040 Msa1236880:CDS
TCTTCATAGCAATCATGGGT+TGG 0.568916 8_2:-16097598 Msa1236880:CDS
CTAGAAGCATTCGATAATCT+CGG 0.569242 8_2:+16097690 None:intergenic
GACTTCGCTCGTGAGGACTT+CGG 0.569518 8_2:+16095102 None:intergenic
TCGTCACTCAATGTTGCGCT+CGG 0.570493 8_2:+16095211 None:intergenic
GATGGTGAAGGAGGCTGTGA+AGG 0.570634 8_2:+16098821 None:intergenic
GTGCTCATTATATCTCTCTC+CGG 0.580272 8_2:+16097486 None:intergenic
ATCGAGCCTTGTCGCACAAG+CGG 0.581241 8_2:+16098251 None:intergenic
GTTTATGAGGATGGCTGAGG+AGG 0.581248 8_2:-16094975 Msa1236880:CDS
TTCCTAGAAGCTGGTTGCGG+CGG 0.582477 8_2:+16097447 None:intergenic
TTCGTCGGTGAAAGATTCAA+CGG 0.583773 8_2:+16097780 None:intergenic
CGTCTCTTCCCTCGCGACGG+TGG 0.583926 8_2:-16098449 Msa1236880:CDS
CTTTGCATTGGGATAAAGTG+AGG 0.585023 8_2:-16097041 Msa1236880:CDS
TCTCCAGAAAGAATCATCGC+TGG 0.585777 8_2:-16097828 Msa1236880:CDS
CACCGTCGCGAGGGAAGAGA+CGG 0.586849 8_2:+16098450 None:intergenic
GAAGGAGGTGATGGTGAAGG+AGG 0.587213 8_2:+16098812 None:intergenic
AAGATCACAACCAAAGTCGC+CGG 0.588309 8_2:-16097973 Msa1236880:CDS
CAAGGCTCGATGTATGATGA+AGG 0.588795 8_2:-16098239 Msa1236880:CDS
CAAGTTTATGAGGATGGCTG+AGG 0.589924 8_2:-16094978 Msa1236880:CDS
TCCGGCGACGAAAGAAGCGT+TGG 0.589989 8_2:+16097504 None:intergenic
GCCGGAAAATGTTGTAACTC+CGG 0.592070 8_2:-16097955 Msa1236880:CDS
AAAGAGACATTACAGTTCCT+CGG 0.592779 8_2:-16094693 Msa1236880:CDS
CTTCTTGGACTTAAACTCAC+CGG 0.597431 8_2:+16097993 None:intergenic
CTAACAAGTAGTGGCTGTGT+CGG 0.598633 8_2:+16097930 None:intergenic
GTTTAGAGACTTCGCTCGTG+AGG 0.598816 8_2:+16095095 None:intergenic
CCAACAGGAGTTGTTGGAGA+AGG 0.599161 8_2:+16097210 None:intergenic
TATTGCTATCTTACTTCGAG+CGG 0.599343 8_2:-16096599 Msa1236880:CDS
GTTAGCTGGGAATGAAGCAA+AGG 0.599604 8_2:+16098661 None:intergenic
CCAACGTCACTAACAAGTAG+TGG 0.601777 8_2:+16097921 None:intergenic
CTCACTTTATCCCAATGCAA+AGG 0.604325 8_2:+16097042 None:intergenic
ATCACAAAAGGCCTTGAAGG+AGG 0.606239 8_2:+16097153 None:intergenic
GATGAAGGAGGTGATGGTGA+AGG 0.606651 8_2:+16098809 None:intergenic
TAAATCCTTTCAGACTCTAG+AGG 0.608370 8_2:-16095575 Msa1236880:intron
AATGTTCTTGAAGCTTCTAG+AGG 0.609255 8_2:-16095428 Msa1236880:CDS
TGAATCTTCATAGCAATCAT+GGG 0.610122 8_2:-16097602 Msa1236880:CDS
GCGGATCCAAACATGCGCTA+AGG 0.610792 8_2:+16094653 None:intergenic
GATGGAGGTGGTGATGAAGG+AGG 0.611563 8_2:+16098797 None:intergenic
CCTTCTCCAACAACTCCTGT+TGG 0.612388 8_2:-16097210 Msa1236880:CDS
GGAGATTGCGACGACAGCGA+CGG 0.612477 8_2:+16098550 None:intergenic
TTTGCATTGGGATAAAGTGA+GGG 0.612685 8_2:-16097040 Msa1236880:CDS
CTGATCGAATGAGAACGATC+CGG 0.614443 8_2:+16098026 None:intergenic
GAAGTGGTTGTGGAAGCATA+GGG 0.615204 8_2:+16094729 None:intergenic
GTGTGTGAAGCACTGTTGGA+AGG 0.615824 8_2:-16096556 Msa1236880:intron
AACTCCTGTTGGTCAACCGG+TGG 0.617457 8_2:-16097199 Msa1236880:CDS
TAGGGACGCCACCGTCGCGA+GGG 0.619280 8_2:+16098441 None:intergenic
TGATTCTGCGAATTTACGAA+CGG 0.620646 8_2:+16095006 None:intergenic
GTAGGGACGCCACCGTCGCG+AGG 0.621384 8_2:+16098440 None:intergenic
TTTCTCGATTTAGCGACGGT+AGG 0.625639 8_2:+16098422 None:intergenic
TTGCAATGCCGATGAAGCAG+CGG 0.626089 8_2:-16097248 Msa1236880:CDS
CCTGATCCACGTGGAGCTGG+TGG 0.629722 8_2:-16098332 Msa1236880:CDS
AGATTCAACGGTGATAAAGA+CGG 0.631157 8_2:+16097792 None:intergenic
GATTGCGACGACAGCGACGG+CGG 0.632996 8_2:+16098553 None:intergenic
GACGACTCTCCAAACAAACT+CGG 0.633316 8_2:-16095706 Msa1236880:CDS
GAGCCTTGTCGCACAAGCGG+CGG 0.634283 8_2:+16098254 None:intergenic
GAAGCAAAGGAAGAAGGTGA+AGG 0.634591 8_2:+16098674 None:intergenic
GAAGAGACGGATACTACTGT+CGG 0.635860 8_2:+16098463 None:intergenic
ATGACCCCATCAAAATCACC+TGG 0.636716 8_2:+16094436 None:intergenic
GATTGTAAAATTGAATCAGA+CGG 0.636908 8_2:-16095044 Msa1236880:CDS
TCTGGCGGCCTACAAACCAC+CGG 0.638956 8_2:+16097183 None:intergenic
GAAGAAGATGAAGTGTTAGG+GGG 0.639171 8_2:+16098743 None:intergenic
TTCATCGGCATTGCAAGTGG+AGG 0.641324 8_2:+16097255 None:intergenic
GAAAGTGGCAATGATGAAAG+AGG 0.642013 8_2:+16097528 None:intergenic
CACACCAAATCCAAAACCAA+AGG 0.642886 8_2:-16096695 Msa1236880:CDS
GACTTCGGAGTCCATTGTCG+CGG 0.643223 8_2:+16095117 None:intergenic
GGTTTGTTCCAACATTCATG+CGG 0.646426 8_2:+16095386 None:intergenic
AAGTTGGTAATATAAATGAA+AGG 0.649106 8_2:-16094793 Msa1236880:CDS
TGAATGCATGCGCATCACCT+CGG 0.653083 8_2:+16095365 None:intergenic
AACGTTTCTCGATTTAGCGA+CGG 0.654326 8_2:+16098418 None:intergenic
AGATTATCGAATGCTTCTAG+TGG 0.659854 8_2:-16097687 Msa1236880:CDS
GTTGACGTTAAAGGTGCAGA+CGG 0.660688 8_2:-16095319 Msa1236880:CDS
GTGTTTCTCAGAGAAAACAA+TGG 0.661644 8_2:-16097359 Msa1236880:CDS
CCACCACCACCAGCTCCACG+TGG 0.663203 8_2:+16098326 None:intergenic
TGTAAAATTGAATCAGACGG+CGG 0.664291 8_2:-16095041 Msa1236880:CDS
ATGAATGTTGGAACAAACCG+AGG 0.666462 8_2:-16095382 Msa1236880:CDS
TCTGCGACAGTAAATGAAAG+CGG 0.666902 8_2:+16098529 None:intergenic
AGATGAACTATCATCATCCG+AGG 0.672198 8_2:+16094676 None:intergenic
CTTGGACTTAAACTCACCGG+TGG 0.674691 8_2:+16097996 None:intergenic
GATGACGGCAGTAATGGCGA+CGG 0.680290 8_2:+16098577 None:intergenic
AAGAACAAGACTGCACGTGA+CGG 0.684747 8_2:+16097862 None:intergenic
TCGATGTATGATGAAGGTAA+TGG 0.688963 8_2:-16098233 Msa1236880:CDS
GAGAGTTAGCAATAGTACCA+AGG 0.698237 8_2:+16098369 None:intergenic
TCATTCTCCTCAAAACTAGG+TGG 0.698465 8_2:+16097090 None:intergenic
ATGTATGATGAAGGTAATGG+TGG 0.713594 8_2:-16098230 Msa1236880:CDS
ATAGCTCATTGGCAACCAAG+TGG 0.715738 8_2:+16094211 None:intergenic
TCTTACACCTCCAAGTCACG+AGG 0.721324 8_2:-16096653 Msa1236880:CDS
GGTGGTGCTAATGTTACAGG+TGG 0.742058 8_2:-16098212 Msa1236880:CDS
TTGATCTATCTAACTCACTG+CGG 0.747316 8_2:+16094634 None:intergenic
GGAGGTGTAAGAACTGAACG+TGG 0.758096 8_2:+16096664 None:intergenic
GATGAACTACCTGATCCACG+TGG 0.836548 8_2:-16098341 Msa1236880:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAATAAAATATTCATT+TGG + chr8_2:16098891-16098910 None:intergenic 10.0%
!!! ATTGTTATTGTTACTATTTT+TGG - chr8_2:16096413-16096432 Msa1236880:intron 15.0%
!!! TTTTAAAATCTAAAGTAGTT+TGG - chr8_2:16096496-16096515 Msa1236880:intron 15.0%
!!! TTGATTTAATTTAAGAAGTT+AGG - chr8_2:16097006-16097025 Msa1236880:CDS 15.0%
!! ACAATATAGCAATAAGATAA+TGG + chr8_2:16096354-16096373 None:intergenic 20.0%
!! AATGATAGAAACATTATTTG+TGG - chr8_2:16096557-16096576 Msa1236880:CDS 20.0%
!!! ATTTAATTTAAGAAGTTAGG+TGG - chr8_2:16097009-16097028 Msa1236880:CDS 20.0%
!! GTTAATTAATCATAATCGTT+AGG - chr8_2:16097265-16097284 Msa1236880:CDS 20.0%
!!! ACTTGAAAGTTTGTTAAAAA+TGG - chr8_2:16097509-16097528 Msa1236880:CDS 20.0%
!!! AAGTTGGTAATATAAATGAA+AGG - chr8_2:16098486-16098505 Msa1236880:CDS 20.0%
!! AAAAATCCTTGTAAAAGATT+TGG - chr8_2:16098920-16098939 Msa1236880:CDS 20.0%
!! AAAATCCTTGTAAAAGATTT+GGG - chr8_2:16098921-16098940 Msa1236880:CDS 20.0%
! AACATGAGATGGTAAAATTT+GGG + chr8_2:16094161-16094180 None:intergenic 25.0%
! TAACATGAGATGGTAAAATT+TGG + chr8_2:16094162-16094181 None:intergenic 25.0%
! TTGAAAAACATAACATGAGA+TGG + chr8_2:16094172-16094191 None:intergenic 25.0%
! AGAAATGAGAAAGAAAAGAA+AGG + chr8_2:16094225-16094244 None:intergenic 25.0%
!!! AGAAGATGATTTGGTTTTTT+GGG + chr8_2:16094669-16094688 None:intergenic 25.0%
!!! AAGAAGATGATTTGGTTTTT+TGG + chr8_2:16094670-16094689 None:intergenic 25.0%
!!! ATAGCAATAAGATAATGGAA+TGG + chr8_2:16096349-16096368 None:intergenic 25.0%
!! AAATCTAAAGTAGTTTGGTT+TGG - chr8_2:16096501-16096520 Msa1236880:intron 25.0%
!!! GCAATATTTTGAGACTTTTT+CGG + chr8_2:16096666-16096685 None:intergenic 25.0%
!! AATTTCTTATTTAAGTGCTG+TGG - chr8_2:16096810-16096829 Msa1236880:intron 25.0%
! CAAAGAAACAAAAACAAACA+AGG + chr8_2:16096858-16096877 None:intergenic 25.0%
!!! CTTGTTTGTTTTTGTTTCTT+TGG - chr8_2:16096856-16096875 Msa1236880:intron 25.0%
! TTTAGTTAATGGTATGCAAA+TGG - chr8_2:16096917-16096936 Msa1236880:intron 25.0%
! CATAAAAGTGAATCGTTATA+TGG - chr8_2:16097198-16097217 Msa1236880:CDS 25.0%
! TAAAAGAAACTTTACACTGA+TGG + chr8_2:16097241-16097260 None:intergenic 25.0%
!!! TGTGTTCAAAAGTTTTTTTG+TGG - chr8_2:16097399-16097418 Msa1236880:CDS 25.0%
! CTTGATCAATATCTAAACAA+GGG + chr8_2:16097425-16097444 None:intergenic 25.0%
! ACTTGATCAATATCTAAACA+AGG + chr8_2:16097426-16097445 None:intergenic 25.0%
!! TAACAAACTTTCAAGTAGTT+CGG + chr8_2:16097505-16097524 None:intergenic 25.0%
!! ATGTACCTTTTGCATTTAAA+AGG - chr8_2:16097628-16097647 Msa1236880:CDS 25.0%
! ATGGAAGAACCATAAATTAT+GGG + chr8_2:16097770-16097789 None:intergenic 25.0%
! AATGGAAGAACCATAAATTA+TGG + chr8_2:16097771-16097790 None:intergenic 25.0%
! AAACATTTGTTTCATGTTTC+AGG - chr8_2:16097800-16097819 Msa1236880:CDS 25.0%
!! CTGATTCAATTTTACAATCT+CGG + chr8_2:16098234-16098253 None:intergenic 25.0%
! GATTGTAAAATTGAATCAGA+CGG - chr8_2:16098235-16098254 Msa1236880:CDS 25.0%
! AATCAATGAACAAGTTTATG+AGG - chr8_2:16098291-16098310 Msa1236880:CDS 25.0%
! TTGAAGCTTCAACAAAATTA+AGG - chr8_2:16098701-16098720 Msa1236880:CDS 25.0%
!! TATAACCCAAATCTTTTACA+AGG + chr8_2:16098929-16098948 None:intergenic 25.0%
! TGATACATAACCTTCATAAA+AGG + chr8_2:16099006-16099025 None:intergenic 25.0%
! ATGAAGGTTATGTATCATAA+TGG - chr8_2:16099009-16099028 Msa1236880:CDS 25.0%
! TGTGTACAAAACAATTCAAA+TGG - chr8_2:16099032-16099051 Msa1236880:CDS 25.0%
! AAACAATTCAAATGGCAAAT+TGG - chr8_2:16099040-16099059 Msa1236880:CDS 25.0%
! TCTATCTATTAATAGCTCAT+TGG + chr8_2:16099082-16099101 None:intergenic 25.0%
AGATGGTAAAATTTGGGTAA+TGG + chr8_2:16094155-16094174 None:intergenic 30.0%
AAAGAAAAGAAAGGAGAAGT+GGG + chr8_2:16094216-16094235 None:intergenic 30.0%
! TTTGTGATGTTCTCTCTTTT+TGG + chr8_2:16094306-16094325 None:intergenic 30.0%
!!! AGATTGTTGTTTTGTGGAAA+AGG + chr8_2:16094434-16094453 None:intergenic 30.0%
!! GAAAATGGGTATTTTGGATT+TGG + chr8_2:16094509-16094528 None:intergenic 30.0%
! GTAGTAGAAAATGGGTATTT+TGG + chr8_2:16094515-16094534 None:intergenic 30.0%
! AAGAAGAAGATGAAGTGTTA+GGG + chr8_2:16094541-16094560 None:intergenic 30.0%
TTAGAGATGAAATGTTAGCT+GGG + chr8_2:16094634-16094653 None:intergenic 30.0%
!!! ATTTGGTTTTTTGGGTTTGT+GGG + chr8_2:16094661-16094680 None:intergenic 30.0%
AAGTTTGGAAGAAGATGATT+TGG + chr8_2:16094678-16094697 None:intergenic 30.0%
! CAAATTTTCAGCTGAAATTC+CGG + chr8_2:16095170-16095189 None:intergenic 30.0%
AATTTCAGCTGAAAATTTGG+TGG - chr8_2:16095171-16095190 Msa1236880:CDS 30.0%
ATTTCAGCTGAAAATTTGGT+GGG - chr8_2:16095172-16095191 Msa1236880:CDS 30.0%
ACTCAATCTTGTAATGAAGA+TGG - chr8_2:16095556-16095575 Msa1236880:intron 30.0%
ATGAATCTTCATAGCAATCA+TGG - chr8_2:16095676-16095695 Msa1236880:CDS 30.0%
TGAATCTTCATAGCAATCAT+GGG - chr8_2:16095677-16095696 Msa1236880:CDS 30.0%
! TCTGAAACATCAGAAATTGT+TGG + chr8_2:16095715-16095734 None:intergenic 30.0%
CAATTTCTGATGTTTCAGAT+CGG - chr8_2:16095716-16095735 Msa1236880:CDS 30.0%
!! ATTCAACAATTGGTGTTAAC+AGG + chr8_2:16095876-16095895 None:intergenic 30.0%
TGTTTCTCAGAGAAAACAAT+GGG - chr8_2:16095921-16095940 Msa1236880:intron 30.0%
! TGGTTTGGATTGAATTGAAT+TGG - chr8_2:16096516-16096535 Msa1236880:intron 30.0%
GGTTTGGATTGAATTGAATT+GGG - chr8_2:16096517-16096536 Msa1236880:intron 30.0%
AAACTTGCAACAAAACATGA+GGG + chr8_2:16096765-16096784 None:intergenic 30.0%
ACAAGGATTTACATAAGTGA+TGG + chr8_2:16096841-16096860 None:intergenic 30.0%
!! TTTGTTTCTTTGGAATCCTT+TGG - chr8_2:16096866-16096885 Msa1236880:intron 30.0%
AGGTAACAAATCTAATCCAA+AGG + chr8_2:16096885-16096904 None:intergenic 30.0%
TAACTAAATCATGTGCAAGT+AGG + chr8_2:16096905-16096924 None:intergenic 30.0%
CTTGCACATGATTTAGTTAA+TGG - chr8_2:16096906-16096925 Msa1236880:intron 30.0%
AATGGTAGTTGCACATTTAA+AGG - chr8_2:16096935-16096954 Msa1236880:intron 30.0%
GAGTTATACCAACACTAATT+TGG - chr8_2:16096968-16096987 Msa1236880:intron 30.0%
TAATTTAAGAAGTTAGGTGG+TGG - chr8_2:16097012-16097031 Msa1236880:CDS 30.0%
AATGATTGAATTGAAGCTAG+TGG - chr8_2:16097055-16097074 Msa1236880:CDS 30.0%
! AATCAACTTGCCTTTTTAAC+AGG - chr8_2:16097459-16097478 Msa1236880:CDS 30.0%
ATCAGTAACACCTGTTAAAA+AGG + chr8_2:16097472-16097491 None:intergenic 30.0%
! TTCTGCTGAGAAATTTTTGA+AGG - chr8_2:16097596-16097615 Msa1236880:CDS 30.0%
! AATGATAGTGTAGTAGAATC+CGG - chr8_2:16097735-16097754 Msa1236880:CDS 30.0%
TAGTGATGTCCCATAATTTA+TGG - chr8_2:16097758-16097777 Msa1236880:CDS 30.0%
CAAATGTTTCGATCAGAAAA+TGG + chr8_2:16097789-16097808 None:intergenic 30.0%
CAAGAAATCATTAGAACAGA+AGG - chr8_2:16098011-16098030 Msa1236880:CDS 30.0%
GAAGTCTCTAAACTTTCAAA+AGG - chr8_2:16098194-16098213 Msa1236880:CDS 30.0%
AATGAACAAGTTTATGAGGA+TGG - chr8_2:16098295-16098314 Msa1236880:CDS 30.0%
! TCATCCATTTAGAATCTTCA+TGG - chr8_2:16098421-16098440 Msa1236880:CDS 30.0%
ACTACCATGAAGATTCTAAA+TGG + chr8_2:16098428-16098447 None:intergenic 30.0%
ACTTCTTAACAGTTCTTGAT+AGG - chr8_2:16098453-16098472 Msa1236880:CDS 30.0%
CTTCTTAACAGTTCTTGATA+GGG - chr8_2:16098454-16098473 Msa1236880:CDS 30.0%
TAGAAAAACAACCTTTAACC+AGG - chr8_2:16098825-16098844 Msa1236880:CDS 30.0%
!! TTTAACCAGGTGATTTTGAT+GGG - chr8_2:16098838-16098857 Msa1236880:CDS 30.0%
! TGGTAAAATTTGGGTAATGG+TGG + chr8_2:16094152-16094171 None:intergenic 35.0%
GAAAGAAAAGAAAGGAGAAG+TGG + chr8_2:16094217-16094236 None:intergenic 35.0%
CTTGGTTCATTTGATGAGAT+TGG + chr8_2:16094395-16094414 None:intergenic 35.0%
!! TTTGTGGAAAAGGTTGATGA+AGG + chr8_2:16094424-16094443 None:intergenic 35.0%
!!! TATTTTGGATTTGGTGATGG+AGG + chr8_2:16094500-16094519 None:intergenic 35.0%
! AGAAGAAGATGAAGTGTTAG+GGG + chr8_2:16094540-16094559 None:intergenic 35.0%
! GAAGAAGAAGATGAAGTGTT+AGG + chr8_2:16094542-16094561 None:intergenic 35.0%
GTTAGAGATGAAATGTTAGC+TGG + chr8_2:16094635-16094654 None:intergenic 35.0%
!!! GATTTGGTTTTTTGGGTTTG+TGG + chr8_2:16094662-16094681 None:intergenic 35.0%
AAACGTTTCTTCTACTAGCT+CGG - chr8_2:16094877-16094896 Msa1236880:CDS 35.0%
TCGATGTATGATGAAGGTAA+TGG - chr8_2:16095046-16095065 Msa1236880:CDS 35.0%
! ATGTATGATGAAGGTAATGG+TGG - chr8_2:16095049-16095068 Msa1236880:CDS 35.0%
!!! GAAGAGTTTTATTCTCCAAG+AGG - chr8_2:16095103-16095122 Msa1236880:CDS 35.0%
TCTCCAAGAGGTTCTTTAAA+CGG - chr8_2:16095115-16095134 Msa1236880:CDS 35.0%
TTTCCGTTTAAAGAACCTCT+TGG + chr8_2:16095121-16095140 None:intergenic 35.0%
AGAGGTTCTTTAAACGGAAA+TGG - chr8_2:16095121-16095140 Msa1236880:CDS 35.0%
GAGGTTCTTTAAACGGAAAT+GGG - chr8_2:16095122-16095141 Msa1236880:CDS 35.0%
TTCTTTAAACGGAAATGGGT+CGG - chr8_2:16095126-16095145 Msa1236880:CDS 35.0%
CGGAATTTCAGCTGAAAATT+TGG - chr8_2:16095168-16095187 Msa1236880:CDS 35.0%
AGATTCAACGGTGATAAAGA+CGG + chr8_2:16095490-16095509 None:intergenic 35.0%
TCACCGACGAAAAATTTAGA+TGG - chr8_2:16095511-16095530 Msa1236880:intron 35.0%
CACCGACGAAAAATTTAGAT+GGG - chr8_2:16095512-16095531 Msa1236880:intron 35.0%
! GACCCATCTAAATTTTTCGT+CGG + chr8_2:16095517-16095536 None:intergenic 35.0%
!! CTAGAAGCATTCGATAATCT+CGG + chr8_2:16095592-16095611 None:intergenic 35.0%
AGATTATCGAATGCTTCTAG+TGG - chr8_2:16095592-16095611 Msa1236880:CDS 35.0%
!! TTCATCATCGTCATTTTCTC+CGG + chr8_2:16095661-16095680 None:intergenic 35.0%
!! ACAGTTGGTGATTCAACAAT+TGG + chr8_2:16095886-16095905 None:intergenic 35.0%
CCATTCTGATTCAAAACAGT+TGG + chr8_2:16095901-16095920 None:intergenic 35.0%
!! CCAACTGTTTTGAATCAGAA+TGG - chr8_2:16095898-16095917 Msa1236880:intron 35.0%
GTGTTTCTCAGAGAAAACAA+TGG - chr8_2:16095920-16095939 Msa1236880:intron 35.0%
!! GTAATTGGTGTTGAAAGAAC+AGG + chr8_2:16095952-16095971 None:intergenic 35.0%
! ACTCTACTAGAAGGTGTAAT+TGG + chr8_2:16095967-16095986 None:intergenic 35.0%
!!! CTTGAAGGAGGTTTTAATTC+TGG + chr8_2:16096117-16096136 None:intergenic 35.0%
CAGAATTAAAACCTCCTTCA+AGG - chr8_2:16096115-16096134 Msa1236880:intron 35.0%
TCAAACTCCTCCAAATACAT+TGG - chr8_2:16096149-16096168 Msa1236880:intron 35.0%
ACTGGAGAAACCAATGTATT+TGG + chr8_2:16096162-16096181 None:intergenic 35.0%
TCTTCATTCTCCTCAAAACT+AGG + chr8_2:16096195-16096214 None:intergenic 35.0%
!!! TAGTTTTGAGGAGAATGAAG+AGG - chr8_2:16096194-16096213 Msa1236880:intron 35.0%
AAAGTTGAAGCCTTTGCATT+GGG - chr8_2:16096227-16096246 Msa1236880:intron 35.0%
TTTGCATTGGGATAAAGTGA+GGG - chr8_2:16096239-16096258 Msa1236880:intron 35.0%
! AAATGGTTTGGGATCATTTG+AGG - chr8_2:16096277-16096296 Msa1236880:intron 35.0%
AAACCCTTACTTAAAAGAGC+TGG + chr8_2:16096304-16096323 None:intergenic 35.0%
TATTGCTATCTTACTTCGAG+CGG - chr8_2:16096680-16096699 Msa1236880:CDS 35.0%
GAAACTTGCAACAAAACATG+AGG + chr8_2:16096766-16096785 None:intergenic 35.0%
GATGTTTGCCAAATTAGTGT+TGG + chr8_2:16096979-16096998 None:intergenic 35.0%
! TTTATGCTTTTAGTGACCAG+AGG + chr8_2:16097110-16097129 None:intergenic 35.0%
! CATATGTACGACTTTAGAAG+TGG + chr8_2:16097320-16097339 None:intergenic 35.0%
! ACCTTTTGCATTTAAAAGGC+TGG - chr8_2:16097632-16097651 Msa1236880:CDS 35.0%
! TCCAGCCTTTTAAATGCAAA+AGG + chr8_2:16097636-16097655 None:intergenic 35.0%
! AGCCAATTTTGAATCTGAAG+TGG - chr8_2:16097671-16097690 Msa1236880:CDS 35.0%
CTCCACTTCAGATTCAAAAT+TGG + chr8_2:16097676-16097695 None:intergenic 35.0%
TAAATCCTTTCAGACTCTAG+AGG - chr8_2:16097704-16097723 Msa1236880:CDS 35.0%
AAATTATGGGACATCACTAC+CGG + chr8_2:16097757-16097776 None:intergenic 35.0%
AATGTTCTTGAAGCTTCTAG+AGG - chr8_2:16097851-16097870 Msa1236880:CDS 35.0%
TGTAAAATTGAATCAGACGG+CGG - chr8_2:16098238-16098257 Msa1236880:CDS 35.0%
TGATTCTGCGAATTTACGAA+CGG + chr8_2:16098276-16098295 None:intergenic 35.0%
!! GAGATCACAGAGTATTTTCA+TGG - chr8_2:16098377-16098396 Msa1236880:CDS 35.0%
TCTATGAGCAGAACTAATCA+TGG + chr8_2:16098513-16098532 None:intergenic 35.0%
AAAGAGACATTACAGTTCCT+CGG - chr8_2:16098586-16098605 Msa1236880:CDS 35.0%
CATCAAAATCACCTGGTTAA+AGG + chr8_2:16098839-16098858 None:intergenic 35.0%
! CTTTAACCAGGTGATTTTGA+TGG - chr8_2:16098837-16098856 Msa1236880:CDS 35.0%
!! TTAACCAGGTGATTTTGATG+GGG - chr8_2:16098839-16098858 Msa1236880:CDS 35.0%
! TAAGCTTGTGCCTTTTATGA+AGG - chr8_2:16098993-16099012 Msa1236880:CDS 35.0%
! GGAAAGAAGAGAGTGTGAAA+AGG + chr8_2:16094195-16094214 None:intergenic 40.0%
AGTGATGAAGGAAGAGAGAA+GGG + chr8_2:16094250-16094269 None:intergenic 40.0%
!! GGTTGATGAAGGAATCTTCT+TGG + chr8_2:16094413-16094432 None:intergenic 40.0%
!!! GGTGAGAGATTGTTGTTTTG+TGG + chr8_2:16094440-16094459 None:intergenic 40.0%
!!! GGGTATTTTGGATTTGGTGA+TGG + chr8_2:16094503-16094522 None:intergenic 40.0%
! TAGGGGGTGTAGTAGAAAAT+GGG + chr8_2:16094523-16094542 None:intergenic 40.0%
! TTAGGGGGTGTAGTAGAAAA+TGG + chr8_2:16094524-16094543 None:intergenic 40.0%
! GAAGAAGATGAAGTGTTAGG+GGG + chr8_2:16094539-16094558 None:intergenic 40.0%
TCTGCGACAGTAAATGAAAG+CGG + chr8_2:16094753-16094772 None:intergenic 40.0%
AACGTTTCTCGATTTAGCGA+CGG + chr8_2:16094864-16094883 None:intergenic 40.0%
GAGAGTTAGCAATAGTACCA+AGG + chr8_2:16094913-16094932 None:intergenic 40.0%
TGGTCGGAATCCAAGAAAAA+TGG - chr8_2:16094979-16094998 Msa1236880:CDS 40.0%
! AATGGTGGTGCTAATGTTAC+AGG - chr8_2:16095064-16095083 Msa1236880:CDS 40.0%
TCTTTAAACGGAAATGGGTC+GGG - chr8_2:16095127-16095146 Msa1236880:CDS 40.0%
TTCATCTTCTTCTGCTTCAC+CGG - chr8_2:16095234-16095253 Msa1236880:CDS 40.0%
CTTCTTGGACTTAAACTCAC+CGG + chr8_2:16095289-16095308 None:intergenic 40.0%
GACTTTGGTTGTGATCTTCT+TGG + chr8_2:16095304-16095323 None:intergenic 40.0%
TTCGTCGGTGAAAGATTCAA+CGG + chr8_2:16095502-16095521 None:intergenic 40.0%
TCTTCATAGCAATCATGGGT+TGG - chr8_2:16095681-16095700 Msa1236880:CDS 40.0%
GAAAGTGGCAATGATGAAAG+AGG + chr8_2:16095754-16095773 None:intergenic 40.0%
GTGCTCATTATATCTCTCTC+CGG + chr8_2:16095796-16095815 None:intergenic 40.0%
!! ACAATTGGTGTTAACAGGTC+AGG + chr8_2:16095871-16095890 None:intergenic 40.0%
!!! GAAGGAGGTTTTAATTCTGG+CGG + chr8_2:16096114-16096133 None:intergenic 40.0%
TGAATCACAAAAGGCCTTGA+AGG + chr8_2:16096132-16096151 None:intergenic 40.0%
GGAGGAGTTTGAATCACAAA+AGG + chr8_2:16096141-16096160 None:intergenic 40.0%
GGAGAAACCAATGTATTTGG+AGG + chr8_2:16096159-16096178 None:intergenic 40.0%
TCATTCTCCTCAAAACTAGG+TGG + chr8_2:16096192-16096211 None:intergenic 40.0%
CAATGCAAAGGCTTCAACTT+TGG + chr8_2:16096228-16096247 None:intergenic 40.0%
CAAAGTTGAAGCCTTTGCAT+TGG - chr8_2:16096226-16096245 Msa1236880:intron 40.0%
CTCACTTTATCCCAATGCAA+AGG + chr8_2:16096240-16096259 None:intergenic 40.0%
CTTTGCATTGGGATAAAGTG+AGG - chr8_2:16096238-16096257 Msa1236880:intron 40.0%
TTCCGATCGTGAAATGGTTT+GGG - chr8_2:16096266-16096285 Msa1236880:intron 40.0%
ATCCCAAACCATTTCACGAT+CGG + chr8_2:16096271-16096290 None:intergenic 40.0%
!! AGGTCCAGCTCTTTTAAGTA+AGG - chr8_2:16096297-16096316 Msa1236880:intron 40.0%
!! GGTCCAGCTCTTTTAAGTAA+GGG - chr8_2:16096298-16096317 Msa1236880:intron 40.0%
GATTGAATTGAATTGGGTGC+AGG - chr8_2:16096523-16096542 Msa1236880:intron 40.0%
CACACCAAATCCAAAACCAA+AGG - chr8_2:16096584-16096603 Msa1236880:CDS 40.0%
!!! GCATCCTTTGGTTTTGGATT+TGG + chr8_2:16096591-16096610 None:intergenic 40.0%
ACTTCGAGCGGTTAATGTTA+CGG - chr8_2:16096692-16096711 Msa1236880:CDS 40.0%
!! GCTGTTTTATAGCTATCCTC+TGG - chr8_2:16097091-16097110 Msa1236880:CDS 40.0%
!! ACAGGTGTTACTGATACACT+TGG - chr8_2:16097477-16097496 Msa1236880:CDS 40.0%
!! CTTTACCTCTAGAGTCTGAA+AGG + chr8_2:16097712-16097731 None:intergenic 40.0%
! GGTTTGTTCCAACATTCATG+CGG + chr8_2:16097896-16097915 None:intergenic 40.0%
ATGAATGTTGGAACAAACCG+AGG - chr8_2:16097897-16097916 Msa1236880:CDS 40.0%
CTTCTTCACATTCGCTAGAT+CGG + chr8_2:16098141-16098160 None:intergenic 40.0%
GTAAAATTGAATCAGACGGC+GGG - chr8_2:16098239-16098258 Msa1236880:CDS 40.0%
GATAGGGTATGCAAAGAAGT+TGG - chr8_2:16098470-16098489 Msa1236880:CDS 40.0%
TTTCCATGTAATCCAGGAAG+TGG + chr8_2:16098569-16098588 None:intergenic 40.0%
TGTCTCTTTCCATGTAATCC+AGG + chr8_2:16098575-16098594 None:intergenic 40.0%
AGATGAACTATCATCATCCG+AGG + chr8_2:16098606-16098625 None:intergenic 40.0%
!! CAATGTGTCGCTGTGATTTT+AGG - chr8_2:16098665-16098684 Msa1236880:CDS 40.0%
GCGATTCCAAATATGCAGTT+AGG - chr8_2:16098751-16098770 Msa1236880:CDS 40.0%
CAGACACCTAACTGCATATT+TGG + chr8_2:16098760-16098779 None:intergenic 40.0%
! TTAGTGTCACTGTGACATCT+TGG - chr8_2:16098789-16098808 Msa1236880:CDS 40.0%
GAGTGATGAAGGAAGAGAGA+AGG + chr8_2:16094251-16094270 None:intergenic 45.0%
GAGAGAGTAGAGAGTGATGA+AGG + chr8_2:16094262-16094281 None:intergenic 45.0%
!! TTTGGATTTGGTGATGGAGG+TGG + chr8_2:16094497-16094516 None:intergenic 45.0%
! GAGGGGTATGTAGGGAAAAA+GGG + chr8_2:16094572-16094591 None:intergenic 45.0%
! TGAGGGGTATGTAGGGAAAA+AGG + chr8_2:16094573-16094592 None:intergenic 45.0%
GAAGCAAAGGAAGAAGGTGA+AGG + chr8_2:16094608-16094627 None:intergenic 45.0%
GGGAATGAAGCAAAGGAAGA+AGG + chr8_2:16094614-16094633 None:intergenic 45.0%
GTTAGCTGGGAATGAAGCAA+AGG + chr8_2:16094621-16094640 None:intergenic 45.0%
GAAGAGACGGATACTACTGT+CGG + chr8_2:16094819-16094838 None:intergenic 45.0%
TTCTCGATTTAGCGACGGTA+GGG + chr8_2:16094859-16094878 None:intergenic 45.0%
TTTCTCGATTTAGCGACGGT+AGG + chr8_2:16094860-16094879 None:intergenic 45.0%
AGCTCGGAGTTTCTTTACCT+TGG - chr8_2:16094893-16094912 Msa1236880:CDS 45.0%
! TCCAAGAAAAATGGACTCGC+CGG - chr8_2:16094988-16095007 Msa1236880:CDS 45.0%
CAAGGCTCGATGTATGATGA+AGG - chr8_2:16095040-16095059 Msa1236880:CDS 45.0%
CTGATCGAATGAGAACGATC+CGG + chr8_2:16095256-16095275 None:intergenic 45.0%
AAGATCACAACCAAAGTCGC+CGG - chr8_2:16095306-16095325 Msa1236880:CDS 45.0%
! ACAACATTTTCCGGCGACTT+TGG + chr8_2:16095319-16095338 None:intergenic 45.0%
GCCGGAAAATGTTGTAACTC+CGG - chr8_2:16095324-16095343 Msa1236880:CDS 45.0%
! GCCGGAGTTACAACATTTTC+CGG + chr8_2:16095328-16095347 None:intergenic 45.0%
CTAACAAGTAGTGGCTGTGT+CGG + chr8_2:16095352-16095371 None:intergenic 45.0%
CCAACGTCACTAACAAGTAG+TGG + chr8_2:16095361-16095380 None:intergenic 45.0%
! CCACTACTTGTTAGTGACGT+TGG - chr8_2:16095358-16095377 Msa1236880:CDS 45.0%
AAGAACAAGACTGCACGTGA+CGG + chr8_2:16095420-16095439 None:intergenic 45.0%
TCTCCAGAAAGAATCATCGC+TGG - chr8_2:16095451-16095470 Msa1236880:CDS 45.0%
TCTCCAGCGATGATTCTTTC+TGG + chr8_2:16095457-16095476 None:intergenic 45.0%
!! GAAAGAAGCGTTGGTGAAAG+TGG + chr8_2:16095769-16095788 None:intergenic 45.0%
! AACCAGCTTCTAGGAAGCAT+TGG - chr8_2:16095839-16095858 Msa1236880:intron 45.0%
!! ACCAGCTTCTAGGAAGCATT+GGG - chr8_2:16095840-16095859 Msa1236880:intron 45.0%
GGAGCTGAAACTCTACTAGA+AGG + chr8_2:16095976-16095995 None:intergenic 45.0%
AACAACTCCTGTTGGTCAAC+CGG - chr8_2:16096077-16096096 Msa1236880:intron 45.0%
ATCACAAAAGGCCTTGAAGG+AGG + chr8_2:16096129-16096148 None:intergenic 45.0%
AAACTAGGTGGCAACTCAAC+TGG + chr8_2:16096180-16096199 None:intergenic 45.0%
!!! TGAGTTGCCACCTAGTTTTG+AGG - chr8_2:16096182-16096201 Msa1236880:intron 45.0%
AACCATTTCACGATCGGAAC+TGG + chr8_2:16096265-16096284 None:intergenic 45.0%
GTTCCGATCGTGAAATGGTT+TGG - chr8_2:16096265-16096284 Msa1236880:intron 45.0%
! AATTGGGTGCAGGTTGAATG+AGG - chr8_2:16096533-16096552 Msa1236880:intron 45.0%
!! GGAGTAGCATCCTTTGGTTT+TGG + chr8_2:16096597-16096616 None:intergenic 45.0%
AATACCCTATCCTCGTGACT+TGG + chr8_2:16096639-16096658 None:intergenic 45.0%
AAGTCACGAGGATAGGGTAT+TGG - chr8_2:16096638-16096657 Msa1236880:CDS 45.0%
AGCGGTTAATGTTACGGTAG+AGG - chr8_2:16096698-16096717 Msa1236880:CDS 45.0%
GTTAAAAATGGCGCCAAGCA+AGG - chr8_2:16097521-16097540 Msa1236880:CDS 45.0%
! GGAAGAAGAGCGCAAATTGA+AGG - chr8_2:16097542-16097561 Msa1236880:CDS 45.0%
GACGACTCTCCAAACAAACT+CGG - chr8_2:16097573-16097592 Msa1236880:CDS 45.0%
! TCAGCAGAACCGAGTTTGTT+TGG + chr8_2:16097585-16097604 None:intergenic 45.0%
TAGAGGCTGTGCTCAAAACT+GGG - chr8_2:16097868-16097887 Msa1236880:CDS 45.0%
GCTTGATACACTTCTCAAGC+TGG - chr8_2:16097938-16097957 Msa1236880:CDS 45.0%
CTCAAGCTGGTTGACGTTAA+AGG - chr8_2:16097951-16097970 Msa1236880:CDS 45.0%
! GTTGACGTTAAAGGTGCAGA+CGG - chr8_2:16097960-16097979 Msa1236880:CDS 45.0%
AAGACCAAGTCTTCTGCACT+TGG + chr8_2:16098096-16098115 None:intergenic 45.0%
CGATCTAGCGAATGTGAAGA+AGG - chr8_2:16098139-16098158 Msa1236880:CDS 45.0%
CAAGTTTATGAGGATGGCTG+AGG - chr8_2:16098301-16098320 Msa1236880:CDS 45.0%
! GAAGTGGTTGTGGAAGCATA+GGG + chr8_2:16098553-16098572 None:intergenic 45.0%
TGTAATCCAGGAAGTGGTTG+TGG + chr8_2:16098563-16098582 None:intergenic 45.0%
CAACCACTTCCTGGATTACA+TGG - chr8_2:16098563-16098582 Msa1236880:CDS 45.0%
TCATCTCCTTAGCGCATGTT+TGG - chr8_2:16098620-16098639 Msa1236880:CDS 45.0%
ATGACCCCATCAAAATCACC+TGG + chr8_2:16098846-16098865 None:intergenic 45.0%
!! AGGTGATTTTGATGGGGTCA+TGG - chr8_2:16098845-16098864 Msa1236880:CDS 45.0%
!! TGATTTTGATGGGGTCATGG+AGG - chr8_2:16098848-16098867 Msa1236880:CDS 45.0%
!! GATTTTGATGGGGTCATGGA+GGG - chr8_2:16098849-16098868 Msa1236880:CDS 45.0%
ATAGCTCATTGGCAACCAAG+TGG + chr8_2:16099071-16099090 None:intergenic 45.0%
!! AAAAAATAAAATATTCATTT+GGG + chr8_2:16098890-16098909 None:intergenic 5.0%
! GATGAAGGAGGTGATGGTGA+AGG + chr8_2:16094473-16094492 None:intergenic 50.0%
GGGTATGTAGGGAAAAAGGG+AGG + chr8_2:16094569-16094588 None:intergenic 50.0%
! AAGAAGGTGAAGGTGGTGGT+GGG + chr8_2:16094598-16094617 None:intergenic 50.0%
AAGGAAGAAGGTGAAGGTGG+TGG + chr8_2:16094602-16094621 None:intergenic 50.0%
GCAAAGGAAGAAGGTGAAGG+TGG + chr8_2:16094605-16094624 None:intergenic 50.0%
GATGAACTACCTGATCCACG+TGG - chr8_2:16094938-16094957 Msa1236880:CDS 50.0%
!! TCCGGCGAGTCCATTTTTCT+TGG + chr8_2:16094992-16095011 None:intergenic 50.0%
! GGTGGTGCTAATGTTACAGG+TGG - chr8_2:16095067-16095086 Msa1236880:CDS 50.0%
TTCGATCAGTCTCTCTCCAC+CGG - chr8_2:16095267-16095286 Msa1236880:CDS 50.0%
CTTGGACTTAAACTCACCGG+TGG + chr8_2:16095286-16095305 None:intergenic 50.0%
GACGTTTACTTTGCCATCGC+CGG - chr8_2:16095639-16095658 Msa1236880:CDS 50.0%
!! ATCGTCATTTTCTCCGGCGA+TGG + chr8_2:16095655-16095674 None:intergenic 50.0%
TGCTTCCTAGAAGCTGGTTG+CGG + chr8_2:16095838-16095857 None:intergenic 50.0%
TCCCAATGCTTCCTAGAAGC+TGG + chr8_2:16095844-16095863 None:intergenic 50.0%
TTCATCGGCATTGCAAGTGG+AGG + chr8_2:16096027-16096046 None:intergenic 50.0%
TGCTTCATCGGCATTGCAAG+TGG + chr8_2:16096030-16096049 None:intergenic 50.0%
TTGCAATGCCGATGAAGCAG+CGG - chr8_2:16096031-16096050 Msa1236880:intron 50.0%
CATTGCTTCCGCTGCTTCAT+CGG + chr8_2:16096042-16096061 None:intergenic 50.0%
GATGAAGCAGCGGAAGCAAT+GGG - chr8_2:16096041-16096060 Msa1236880:intron 50.0%
CCAACAGGAGTTGTTGGAGA+AGG + chr8_2:16096072-16096091 None:intergenic 50.0%
CCTTCTCCAACAACTCCTGT+TGG - chr8_2:16096069-16096088 Msa1236880:intron 50.0%
GGTTGACCAACAGGAGTTGT+TGG + chr8_2:16096078-16096097 None:intergenic 50.0%
! TTGGTCAACCGGTGGTTTGT+AGG - chr8_2:16096088-16096107 Msa1236880:intron 50.0%
GAACGTGGAGTAGCATCCTT+TGG + chr8_2:16096603-16096622 None:intergenic 50.0%
! GGAGGTGTAAGAACTGAACG+TGG + chr8_2:16096618-16096637 None:intergenic 50.0%
TCTTACACCTCCAAGTCACG+AGG - chr8_2:16096626-16096645 Msa1236880:CDS 50.0%
ACCTCCAAGTCACGAGGATA+GGG - chr8_2:16096632-16096651 Msa1236880:CDS 50.0%
!! GGAAGTGTGTGAAGCACTGT+TGG - chr8_2:16096719-16096738 Msa1236880:CDS 50.0%
!! GTGTGTGAAGCACTGTTGGA+AGG - chr8_2:16096723-16096742 Msa1236880:CDS 50.0%
TTGCGCTCTTCTTCCTTGCT+TGG + chr8_2:16097537-16097556 None:intergenic 50.0%
CTAGAGGCTGTGCTCAAAAC+TGG - chr8_2:16097867-16097886 Msa1236880:CDS 50.0%
ACTGGGAACCGCATGAATGT+TGG - chr8_2:16097885-16097904 Msa1236880:CDS 50.0%
TGAATGCATGCGCATCACCT+CGG + chr8_2:16097917-16097936 None:intergenic 50.0%
TCGTCACTCAATGTTGCGCT+CGG + chr8_2:16098071-16098090 None:intergenic 50.0%
GATGCCAAGTGCAGAAGACT+TGG - chr8_2:16098089-16098108 Msa1236880:CDS 50.0%
GTTTAGAGACTTCGCTCGTG+AGG + chr8_2:16098187-16098206 None:intergenic 50.0%
ATTGAATCAGACGGCGGGAT+CGG - chr8_2:16098244-16098263 Msa1236880:CDS 50.0%
GTTTATGAGGATGGCTGAGG+AGG - chr8_2:16098304-16098323 Msa1236880:CDS 50.0%
AGCATAGGGTTCACTGGAAC+AGG + chr8_2:16098539-16098558 None:intergenic 50.0%
! TGTGGAAGCATAGGGTTCAC+TGG + chr8_2:16098545-16098564 None:intergenic 50.0%
! GGAAGTGGTTGTGGAAGCAT+AGG + chr8_2:16098554-16098573 None:intergenic 50.0%
ATGCTTCCACAACCACTTCC+TGG - chr8_2:16098554-16098573 Msa1236880:CDS 50.0%
! ATGGAGGGTGCATTATGGTC+TGG - chr8_2:16098864-16098883 Msa1236880:CDS 50.0%
GGCAAATTGGAGACACCACT+TGG - chr8_2:16099053-16099072 Msa1236880:CDS 50.0%
GATGGTGAAGGAGGCTGTGA+AGG + chr8_2:16094461-16094480 None:intergenic 55.0%
! GAAGGAGGTGATGGTGAAGG+AGG + chr8_2:16094470-16094489 None:intergenic 55.0%
! GGTGGTGATGAAGGAGGTGA+TGG + chr8_2:16094479-16094498 None:intergenic 55.0%
! GATGGAGGTGGTGATGAAGG+AGG + chr8_2:16094485-16094504 None:intergenic 55.0%
!! GGTGATGGAGGTGGTGATGA+AGG + chr8_2:16094488-16094507 None:intergenic 55.0%
! GTGGGGTTGAGGGGTATGTA+GGG + chr8_2:16094580-16094599 None:intergenic 55.0%
! AGAAGGTGAAGGTGGTGGTG+GGG + chr8_2:16094597-16094616 None:intergenic 55.0%
! GAAGAAGGTGAAGGTGGTGG+TGG + chr8_2:16094599-16094618 None:intergenic 55.0%
AATGGCGACGGCGAGAAGTT+TGG + chr8_2:16094693-16094712 None:intergenic 55.0%
! GATGACGGCAGTAATGGCGA+CGG + chr8_2:16094705-16094724 None:intergenic 55.0%
! ATCGAGCCTTGTCGCACAAG+CGG + chr8_2:16095031-16095050 None:intergenic 55.0%
ACGGAAATGGGTCGGGTTCT+CGG - chr8_2:16095134-16095153 Msa1236880:CDS 55.0%
! GGTTCTCGGAGAGTTTTCGC+CGG - chr8_2:16095148-16095167 Msa1236880:CDS 55.0%
ACCAACGCTTCTTTCGTCGC+CGG - chr8_2:16095774-16095793 Msa1236880:CDS 55.0%
TTCCTAGAAGCTGGTTGCGG+CGG + chr8_2:16095835-16095854 None:intergenic 55.0%
! ATTGCAAGTGGAGGTGGTGG+TGG + chr8_2:16096018-16096037 None:intergenic 55.0%
ATCGGCATTGCAAGTGGAGG+TGG + chr8_2:16096024-16096043 None:intergenic 55.0%
CGATGAAGCAGCGGAAGCAA+TGG - chr8_2:16096040-16096059 Msa1236880:intron 55.0%
AACTCCTGTTGGTCAACCGG+TGG - chr8_2:16096080-16096099 Msa1236880:intron 55.0%
! CAAACCACCGGTTGACCAAC+AGG + chr8_2:16096087-16096106 None:intergenic 55.0%
GGCCAGTTCCGATCGTGAAA+TGG - chr8_2:16096260-16096279 Msa1236880:intron 55.0%
CACCTCCAAGTCACGAGGAT+AGG - chr8_2:16096631-16096650 Msa1236880:CDS 55.0%
! ACCCTATCCTCGTGACTTGG+AGG + chr8_2:16096636-16096655 None:intergenic 55.0%
TGTGAAGAAGGCCGCGACAA+TGG - chr8_2:16098151-16098170 Msa1236880:CDS 55.0%
GACTTCGGAGTCCATTGTCG+CGG + chr8_2:16098165-16098184 None:intergenic 55.0%
GACTTCGCTCGTGAGGACTT+CGG + chr8_2:16098180-16098199 None:intergenic 55.0%
! GGGTCATGGAGGGTGCATTA+TGG - chr8_2:16098859-16098878 Msa1236880:CDS 55.0%
! GGTGGGGTTGAGGGGTATGT+AGG + chr8_2:16094581-16094600 None:intergenic 60.0%
!! AAGGTGGTGGTGGGGTTGAG+GGG + chr8_2:16094589-16094608 None:intergenic 60.0%
!! GAAGGTGGTGGTGGGGTTGA+GGG + chr8_2:16094590-16094609 None:intergenic 60.0%
!! TGAAGGTGGTGGTGGGGTTG+AGG + chr8_2:16094591-16094610 None:intergenic 60.0%
GGAGATTGCGACGACAGCGA+CGG + chr8_2:16094732-16094751 None:intergenic 60.0%
ATCCGTCTCTTCCCTCGCGA+CGG - chr8_2:16094827-16094846 Msa1236880:CDS 60.0%
CTACCTGATCCACGTGGAGC+TGG - chr8_2:16094944-16094963 Msa1236880:CDS 60.0%
TGTCGCACAAGCGGCGGTAA+CGG + chr8_2:16095022-16095041 None:intergenic 60.0%
TTACCGCCGCTTGTGCGACA+AGG - chr8_2:16095022-16095041 Msa1236880:CDS 60.0%
! AGTAGTGGCTGTGTCGGTGC+CGG + chr8_2:16095346-16095365 None:intergenic 60.0%
! TCCGGCGACGAAAGAAGCGT+TGG + chr8_2:16095778-16095797 None:intergenic 60.0%
TAGAAGCTGGTTGCGGCGGT+GGG + chr8_2:16095831-16095850 None:intergenic 60.0%
GGCATTGCAAGTGGAGGTGG+TGG + chr8_2:16096021-16096040 None:intergenic 60.0%
TCTGGCGGCCTACAAACCAC+CGG + chr8_2:16096099-16096118 None:intergenic 60.0%
! GGCGGCGATGACGGCAGTAA+TGG + chr8_2:16094711-16094730 None:intergenic 65.0%
GATTGCGACGACAGCGACGG+CGG + chr8_2:16094729-16094748 None:intergenic 65.0%
CACCGTCGCGAGGGAAGAGA+CGG + chr8_2:16094832-16094851 None:intergenic 65.0%
CCACCAGCTCCACGTGGATC+AGG + chr8_2:16094950-16094969 None:intergenic 65.0%
CCTGATCCACGTGGAGCTGG+TGG - chr8_2:16094947-16094966 Msa1236880:CDS 65.0%
GATCCACGTGGAGCTGGTGG+TGG - chr8_2:16094950-16094969 Msa1236880:CDS 65.0%
!! CTGGTGGTGGTGGTGGTGGT+CGG - chr8_2:16094963-16094982 Msa1236880:CDS 65.0%
! GGCGGTAACGGCTGTAGCTC+CGG + chr8_2:16095010-16095029 None:intergenic 65.0%
! GAGCCTTGTCGCACAAGCGG+CGG + chr8_2:16095028-16095047 None:intergenic 65.0%
AGAAGCTGGTTGCGGCGGTG+GGG + chr8_2:16095830-16095849 None:intergenic 65.0%
CTAGAAGCTGGTTGCGGCGG+TGG + chr8_2:16095832-16095851 None:intergenic 65.0%
CACCGCCGCAACCAGCTTCT+AGG - chr8_2:16095830-16095849 Msa1236880:intron 65.0%
!! AGTGGAGGTGGTGGTGGTGG+TGG + chr8_2:16096012-16096031 None:intergenic 65.0%
!! GCAAGTGGAGGTGGTGGTGG+TGG + chr8_2:16096015-16096034 None:intergenic 65.0%
GACAGCGACGGCGGCGATGA+CGG + chr8_2:16094720-16094739 None:intergenic 70.0%
CGTCTCTTCCCTCGCGACGG+TGG - chr8_2:16094830-16094849 Msa1236880:CDS 70.0%
TAGGGACGCCACCGTCGCGA+GGG + chr8_2:16094841-16094860 None:intergenic 70.0%
CCACCACCACCAGCTCCACG+TGG + chr8_2:16094956-16094975 None:intergenic 70.0%
!! CCACGTGGAGCTGGTGGTGG+TGG - chr8_2:16094953-16094972 Msa1236880:CDS 70.0%
!! CGTGGAGCTGGTGGTGGTGG+TGG - chr8_2:16094956-16094975 Msa1236880:CDS 70.0%
!! GGAGCTGGTGGTGGTGGTGG+TGG - chr8_2:16094959-16094978 Msa1236880:CDS 70.0%
GAAGCTGGTTGCGGCGGTGG+GGG + chr8_2:16095829-16095848 None:intergenic 70.0%
!! GGAGGTGGTGGTGGTGGTGG+CGG + chr8_2:16096009-16096028 None:intergenic 70.0%
GTAGGGACGCCACCGTCGCG+AGG + chr8_2:16094842-16094861 None:intergenic 75.0%
!! GGTGGTGGCGGTGGTGGTGG+AGG + chr8_2:16095997-16096016 None:intergenic 75.0%
!! GGTGGTGGTGGCGGTGGTGG+TGG + chr8_2:16096000-16096019 None:intergenic 75.0%
!! GGTGGTGGTGGTGGCGGTGG+TGG + chr8_2:16096003-16096022 None:intergenic 75.0%
!! GGTGGTGGTGGTGGTGGCGG+TGG + chr8_2:16096006-16096025 None:intergenic 75.0%
! GGTTGCGGCGGTGGGGGTGG+TGG + chr8_2:16095823-16095842 None:intergenic 80.0%
! GCTGGTTGCGGCGGTGGGGG+TGG + chr8_2:16095826-16095845 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 16094147 16099154 16094147 ID=Msa1236880;Name=Msa1236880
chr8_2 mRNA 16094147 16099154 16094147 ID=Msa1236880-mRNA-1;Parent=Msa1236880;Name=Msa1236880-mRNA-1;_AED=0.03;_eAED=0.03;_QI=29|1|1|1|1|1|4|523|1130
chr8_2 exon 16094147 16095479 16094147 ID=Msa1236880-mRNA-1:exon:6038;Parent=Msa1236880-mRNA-1
chr8_2 exon 16095576 16095820 16095576 ID=Msa1236880-mRNA-1:exon:6037;Parent=Msa1236880-mRNA-1
chr8_2 exon 16096557 16096756 16096557 ID=Msa1236880-mRNA-1:exon:6036;Parent=Msa1236880-mRNA-1
chr8_2 exon 16096988 16099154 16096988 ID=Msa1236880-mRNA-1:exon:6035;Parent=Msa1236880-mRNA-1
chr8_2 five_prime_UTR 16099126 16099154 16099126 ID=Msa1236880-mRNA-1:five_prime_utr;Parent=Msa1236880-mRNA-1
chr8_2 CDS 16096988 16099125 16096988 ID=Msa1236880-mRNA-1:cds;Parent=Msa1236880-mRNA-1
chr8_2 CDS 16096557 16096756 16096557 ID=Msa1236880-mRNA-1:cds;Parent=Msa1236880-mRNA-1
chr8_2 CDS 16095576 16095820 16095576 ID=Msa1236880-mRNA-1:cds;Parent=Msa1236880-mRNA-1
chr8_2 CDS 16094670 16095479 16094670 ID=Msa1236880-mRNA-1:cds;Parent=Msa1236880-mRNA-1
chr8_2 three_prime_UTR 16094147 16094669 16094147 ID=Msa1236880-mRNA-1:three_prime_utr;Parent=Msa1236880-mRNA-1
Gene Sequence

>Msa1236880

ATGTTATGTTTTTCAACCTTTTCACACTCTCTTCTTTCCCACTTCTCCTTTCTTTTCTTTCTCATTTCTCTCCCTTCTCTCTTCCTTCATCACTCTCTACTCTCTCTCTCTAAACACATTCACTACACCAAAAAGAGAGAACATCACAAACACAAATTCACAATGTGCTATTACTCTTTCTTCTTCTTCTTCTTATGCATTCTCATCTTCTTCAAACCAATCTCATCAAATGAACCAAGAAGATTCCTTCATCAACCTTTTCCACAAAACAACAATCTCTCACCTTCACAGCCTCCTTCACCATCACCTCCTTCATCACCACCTCCATCACCAAATCCAAAATACCCATTTTCTACTACACCCCCTAACACTTCATCTTCTTCTTCTACACCTCCCTTTTTCCCTACATACCCCTCAACCCCACCACCACCTTCACCTTCTTCCTTTGCTTCATTCCCAGCTAACATTTCATCTCTAACTATCCCACAAACCCAAAAAACCAAATCATCTTCTTCCAAACTTCTCGCCGTCGCCATTACTGCCGTCATCGCCGCCGTCGCTGTCGTCGCAATCTCCGCTTTCATTTACTGTCGCAGAAGTCGCAGTAAAAGATTCTTAGCTGATGATAAAACACTCAGATCCGACAGTAGTATCCGTCTCTTCCCTCGCGACGGTGGCGTCCCTACCGTCGCTAAATCGAGAAACGTTTCTTCTACTAGCTCGGAGTTTCTTTACCTTGGTACTATTGCTAACTCTCGAAGCGATGAACTACCTGATCCACGTGGAGCTGGTGGTGGTGGTGGTGGTCGGAATCCAAGAAAAATGGACTCGCCGGAGCTACAGCCGTTACCGCCGCTTGTGCGACAAGGCTCGATGTATGATGAAGGTAATGGTGGTGCTAATGTTACAGGTGGTGAAGATGATGAAGAAGAGTTTTATTCTCCAAGAGGTTCTTTAAACGGAAATGGGTCGGGTTCTCGGAGAGTTTTCGCCGGAATTTCAGCTGAAAATTTGGTGGGTCGAAGTAGCAGTGAATCTACTTCTTCATCTTCTTCGTATTCATCTTCTTCTGCTTCACCGGATCGTTCTCATTCGATCAGTCTCTCTCCACCGGTGAGTTTAAGTCCAAGAAGATCACAACCAAAGTCGCCGGAAAATGTTGTAACTCCGGCACCGACACAGCCACTACTTGTTAGTGACGTTGGAAGAAGCTCGTTGTCGTCGTCACGAACTTCTTCTAACCGTCACGTGCAGTCTTGTTCTTCTATGTCTTCATCTCCAGAAAGAATCATCGCTGGAGAATGTAAGTCACCGTCTTTATCACCGTTGAATCTTTCACCGACGAAAAATTTAGATGGGTCTTTTGTTAAAGTTGAAAAGACTCAATCTTGTAATGAAGATGGTTCTTCTTCGCCGAGATTATCGAATGCTTCTAGTGGTAAATCATCGTCTTCTTCTTCGTCGACGTTTACTTTGCCATCGCCGGAGAAAATGACGATGATGAATCTTCATAGCAATCATGGGTTGGATCAGTCTCCAACAATTTCTGATGTTTCAGATCGGTTTAGACATTCTCCTCTTTCATCATTGCCACTTTCACCAACGCTTCTTTCGTCGCCGGAGAGAGATATAATGAGCACTCAACCACCACCCCCACCGCCGCAACCAGCTTCTAGGAAGCATTGGGAGATTCCTGACCTGTTAACACCAATTGTTGAATCACCAACTGTTTTGAATCAGAATGGTGTTTCTCAGAGAAAACAATGGGAAATTCCTGTTCTTTCAACACCAATTACACCTTCTAGTAGAGTTTCAGCTCCTCCACCACCACCGCCACCACCACCACCACCTCCACTTGCAATGCCGATGAAGCAGCGGAAGCAATGGGAAGTACCTTCTCCAACAACTCCTGTTGGTCAACCGGTGGTTTGTAGGCCGCCAGAATTAAAACCTCCTTCAAGGCCTTTTGTGATTCAAACTCCTCCAAATACATTGGTTTCTCCAGTTGAGTTGCCACCTAGTTTTGAGGAGAATGAAGAGGTTTCTAAACCAAAGTTGAAGCCTTTGCATTGGGATAAAGTGAGGGCCAGTTCCGATCGTGAAATGGTTTGGGATCATTTGAGGTCCAGCTCTTTTAAGTTGAATGAGGAAATGATAGAAACATTATTTGTGGTGAACACACCAAATCCAAAACCAAAGGATGCTACTCCACGTTCAGTTCTTACACCTCCAAGTCACGAGGATAGGGTATTGGATCCGAAAAAGTCTCAAAATATTGCTATCTTACTTCGAGCGGTTAATGTTACGGTAGAGGAAGTGTGTGAAGCACTGTTGGAAGGTGTTACTGATACACTTGGAACCGAACTACTTGAAAGTTTGTTAAAAATGGCGCCAAGCAAGGAAGAAGAGCGCAAATTGAAGGAACATAAAGACGACTCTCCAAACAAACTCGGTTCTGCTGAGAAATTTTTGAAGGCAGTTCTCGATGTACCTTTTGCATTTAAAAGGCTGGAAGCTATGCTTTACATAGCCAATTTTGAATCTGAAGTGGAGTATATTCGTAAATCCTTTCAGACTCTAGAGGTTGCATGTGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAACCGCATGAATGTTGGAACAAACCGAGGTGATGCGCATGCATTCAAGCTTGATACACTTCTCAAGCTGGTTGACGTTAAAGGTGCAGACGGTAAAACAACTCTTCTACACTTCGTTGTACAAGAAATCATTAGAACAGAAGGAGCTCGTCATTCAGATACTTCTACTAATCAAACACCGAGCGCAACATTGAGTGACGATGCCAAGTGCAGAAGACTTGGTCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCGAATGTGAAGAAGGCCGCGACAATGGACTCCGAAGTCCTCACGAGCGAAGTCTCTAAACTTTCAAAAGGAATCACACACATCGCCGAGATTGTAAAATTGAATCAGACGGCGGGATCGGATGAAACCGTTCGTAAATTCGCAGAATCAATGAACAAGTTTATGAGGATGGCTGAGGAGGAGATTTTAAGAATTCAAGCACAAGAAAGTGTTGCTTTATCACTTGTGAAAGAGATCACAGAGTATTTTCATGGTAACTTATCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGATAGGGTATGCAAAGAAGTTGGTAATATAAATGAAAGGACCATGATTAGTTCTGCTCATAGATTTCCTGTTCCAGTGAACCCTATGCTTCCACAACCACTTCCTGGATTACATGGAAAGAGACATTACAGTTCCTCGGATGATGATAGTTCATCTCCTTAG
Protein sequence

>Msa1236880

MLCFSTFSHSLLSHFSFLFFLISLPSLFLHHSLLSLSKHIHYTKKREHHKHKFTMCYYSFFFFFLCILIFFKPISSNEPRRFLHQPFPQNNNLSPSQPPSPSPPSSPPPSPNPKYPFSTTPPNTSSSSSTPPFFPTYPSTPPPPSPSSFASFPANISSLTIPQTQKTKSSSSKLLAVAITAVIAAVAVVAISAFIYCRRSRSKRFLADDKTLRSDSSIRLFPRDGGVPTVAKSRNVSSTSSEFLYLGTIANSRSDELPDPRGAGGGGGGRNPRKMDSPELQPLPPLVRQGSMYDEGNGGANVTGGEDDEEEFYSPRGSLNGNGSGSRRVFAGISAENLVGRSSSESTSSSSSYSSSSASPDRSHSISLSPPVSLSPRRSQPKSPENVVTPAPTQPLLVSDVGRSSLSSSRTSSNRHVQSCSSMSSSPERIIAGECKSPSLSPLNLSPTKNLDGSFVKVEKTQSCNEDGSSSPRLSNASSGKSSSSSSSTFTLPSPEKMTMMNLHSNHGLDQSPTISDVSDRFRHSPLSSLPLSPTLLSSPERDIMSTQPPPPPPQPASRKHWEIPDLLTPIVESPTVLNQNGVSQRKQWEIPVLSTPITPSSRVSAPPPPPPPPPPPPLAMPMKQRKQWEVPSPTTPVGQPVVCRPPELKPPSRPFVIQTPPNTLVSPVELPPSFEENEEVSKPKLKPLHWDKVRASSDREMVWDHLRSSSFKLNEEMIETLFVVNTPNPKPKDATPRSVLTPPSHEDRVLDPKKSQNIAILLRAVNVTVEEVCEALLEGVTDTLGTELLESLLKMAPSKEEERKLKEHKDDSPNKLGSAEKFLKAVLDVPFAFKRLEAMLYIANFESEVEYIRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTSTNQTPSATLSDDAKCRRLGLQVVSSLSSDLANVKKAATMDSEVLTSEVSKLSKGITHIAEIVKLNQTAGSDETVRKFAESMNKFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGNINERTMISSAHRFPVPVNPMLPQPLPGLHGKRHYSSSDDDSSSP*