AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1238150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238150 MtrunA17_Chr8g0341301 97.177 248 1 1 1 242 1 248 4.55e-179 491
Msa1238150 MtrunA17_Chr8g0356941 94.828 116 0 1 65 174 1 116 1.20e-73 219
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1238150 AT3G21350.1 65.957 235 73 2 14 242 24 257 1.05e-96 283
Msa1238150 AT3G21350.2 56.159 276 73 4 14 242 24 298 3.01e-88 263

Find 83 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGCTTCCTGAGTTTC+AGG 0.111896 8_2:+17999206 None:intergenic
AATGCTTGCTTATTATATTT+TGG 0.131733 8_2:-18003648 Msa1238150:CDS
TGCAGGACCTTGATCAAGTA+TGG 0.244509 8_2:+17999160 None:intergenic
GTTAACTTTATGTTATTCTT+TGG 0.255357 8_2:-17999060 Msa1238150:three_prime_UTR
GATTAATGTTTATTCCTTTC+GGG 0.268497 8_2:-17999102 Msa1238150:three_prime_UTR
TGATTAATGTTTATTCCTTT+CGG 0.268854 8_2:-17999103 Msa1238150:three_prime_UTR
CATAAAGTTAACCATCTTTC+GGG 0.270475 8_2:+17999071 None:intergenic
CACAGTGATATTTACATTCA+TGG 0.278321 8_2:+17999006 None:intergenic
ATTTCAGTTTAGTCAATATA+TGG 0.279026 8_2:-17998962 Msa1238150:three_prime_UTR
TCCTTAGCCGCCTTTGGTTC+CGG 0.292862 8_2:+18001165 None:intergenic
AGCATTGGAGTAACTTTATC+AGG 0.301759 8_2:+18003665 None:intergenic
TATGCTTCAGAGATCAATTA+TGG 0.306984 8_2:-18003990 Msa1238150:CDS
ACATAAAGTTAACCATCTTT+CGG 0.308898 8_2:+17999070 None:intergenic
TTCTCAGTTTCTGCTGTTGA+AGG 0.324297 8_2:+17999233 None:intergenic
AAAACAATCTTAATTATCAT+TGG 0.348402 8_2:-17998923 Msa1238150:three_prime_UTR
ATTGTCTCCTTAGCCGCCTT+TGG 0.366190 8_2:+18001159 None:intergenic
ATTCCGGTCATGTCGGTTCC+CGG 0.388633 8_2:+18004012 None:intergenic
AATGGTGGCGGAGGCGGAGC+AGG 0.400010 8_2:+17999275 None:intergenic
CCGTCTAACATTCCCATTCC+CGG 0.401387 8_2:+18004057 None:intergenic
CTTTATCACCTTTCTACGAT+TGG 0.408696 8_2:-18003921 Msa1238150:CDS
TGAAAACGAGACTACAATTC+CGG 0.419986 8_2:-18001184 Msa1238150:CDS
GGAACATACCCTTCTGGAAA+TGG 0.420482 8_2:+17999257 None:intergenic
AAGTTGGAGAAGATAGGATA+TGG 0.422814 8_2:-18002905 Msa1238150:intron
TTGATCTCTGAAGCATATTC+CGG 0.424128 8_2:+18003996 None:intergenic
TCTGGAAATGGTGGCGGAGG+CGG 0.425379 8_2:+17999269 None:intergenic
TAGGGTTTCAGGAAAATGAT+TGG 0.437092 8_2:-18003758 Msa1238150:intron
GTGGATGATGAGAACGCATT+CGG 0.442890 8_2:+18003878 None:intergenic
CAGCTGCTTCCTGAGTTTCA+GGG 0.462781 8_2:+17999207 None:intergenic
GGGAAGGCGTACCCGAAAGA+TGG 0.463156 8_2:-17999082 Msa1238150:three_prime_UTR
TCCGGAACCAAAGGCGGCTA+AGG 0.463236 8_2:-18001166 Msa1238150:CDS
GGTGGCGGAGGCGGAGCAGG+TGG 0.464187 8_2:+17999278 None:intergenic
TACTACAGCTGCATCTAAGT+TGG 0.467810 8_2:-18002921 Msa1238150:CDS
GAGATGGCGACACCGGGAAT+GGG 0.471762 8_2:-18004069 Msa1238150:CDS
ATTCCCGGTGTCGCCATCTC+CGG 0.472757 8_2:+18004072 None:intergenic
GAAGGTGGAACATACCCTTC+TGG 0.474764 8_2:+17999251 None:intergenic
TGAGAAAGGCCCTGAAACTC+AGG 0.475765 8_2:-17999216 Msa1238150:CDS
TCAGTTTCTGCTGTTGAAGG+TGG 0.476136 8_2:+17999236 None:intergenic
GGAGATGGCGACACCGGGAA+TGG 0.476646 8_2:-18004070 Msa1238150:exon
GGCACTATATTATATTGAAA+AGG 0.479926 8_2:-18002948 Msa1238150:CDS
ATATGTGTTGAGTGAAGTTA+TGG 0.488473 8_2:-18003729 Msa1238150:CDS
AGTACCGACGGCGCAACCAC+CGG 0.490492 8_2:-18004031 Msa1238150:CDS
GTTCCCGGTGGTTGCGCCGT+CGG 0.494514 8_2:+18004027 None:intergenic
AAAATATAATAAGCAAGCAT+TGG 0.508033 8_2:+18003650 None:intergenic
GACTACAATTCCGGAACCAA+AGG 0.516918 8_2:-18001175 Msa1238150:CDS
TTCGGGTACGCCTTCCCGAA+AGG 0.519458 8_2:+17999088 None:intergenic
GCATCTAAGTTGGAGAAGAT+AGG 0.520492 8_2:-18002911 Msa1238150:CDS
GTACCGACGGCGCAACCACC+GGG 0.520900 8_2:-18004030 Msa1238150:CDS
GGTGTCGCCATCTCCGGCAC+CGG 0.523288 8_2:+18004078 None:intergenic
CACTGAGAGAGAACCGGTGC+CGG 0.524691 8_2:-18004091 Msa1238150:five_prime_UTR
CCACCGGGAACCGACATGAC+CGG 0.527398 8_2:-18004015 Msa1238150:CDS
TCACAGCACTGAGAGAGAAC+CGG 0.539374 8_2:-18004097 Msa1238150:five_prime_UTR
GAGAGAACCGGTGCCGGAGA+TGG 0.543791 8_2:-18004085 Msa1238150:exon
CCTTCTGGAAATGGTGGCGG+AGG 0.545037 8_2:+17999266 None:intergenic
GCAGGACCTTGATCAAGTAT+GGG 0.546098 8_2:+17999161 None:intergenic
TCTTGCTTCCTTGCAACGCA+AGG 0.547305 8_2:-18001103 Msa1238150:intron
GTCCACTGCACTTCGCTACA+CGG 0.547653 8_2:-17998891 Msa1238150:three_prime_UTR
CTTAAAAGAAATTAAGCGAG+TGG 0.550328 8_2:-18001133 Msa1238150:CDS
TACCCTTCTGGAAATGGTGG+CGG 0.551262 8_2:+17999263 None:intergenic
GTGCCGGAGATGGCGACACC+GGG 0.551916 8_2:-18004075 Msa1238150:exon
GTTGATCCCATACTTGATCA+AGG 0.558709 8_2:-17999167 Msa1238150:CDS
GGTGCCGGAGATGGCGACAC+CGG 0.565787 8_2:-18004076 Msa1238150:exon
TCAACTCACCTTGCGTTGCA+AGG 0.566309 8_2:+18001095 None:intergenic
TTAGAAGTCCAATCGTAGAA+AGG 0.566992 8_2:+18003913 None:intergenic
GTCCGTGTAGCGAAGTGCAG+TGG 0.573843 8_2:+17998889 None:intergenic
AATGTTTATTCCTTTCGGGA+AGG 0.579907 8_2:-17999098 Msa1238150:three_prime_UTR
TTATCATGAAGAAGCAGAAG+AGG 0.585561 8_2:-18003694 Msa1238150:CDS
CTCCGCCACCATTTCCAGAA+GGG 0.586553 8_2:-17999265 Msa1238150:CDS
TATCATGAAGAAGCAGAAGA+GGG 0.593643 8_2:-18003693 Msa1238150:CDS
TCAACAGCAGAAACTGAGAA+AGG 0.597039 8_2:-17999230 Msa1238150:CDS
GTTAGACGGCGGAGTACCGA+CGG 0.600181 8_2:-18004043 Msa1238150:CDS
CCTCCGCCACCATTTCCAGA+AGG 0.602841 8_2:-17999266 Msa1238150:CDS
AATTACGTACGTGAGTTGAG+AGG 0.602924 8_2:+18003849 None:intergenic
TCAAGTATGGGATCAACAGT+AGG 0.616233 8_2:+17999173 None:intergenic
CCGGGAATGGGAATGTTAGA+CGG 0.617152 8_2:-18004057 Msa1238150:CDS
TACAATTCCGGAACCAAAGG+CGG 0.617747 8_2:-18001172 Msa1238150:CDS
GAAGCATATTCCGGTCATGT+CGG 0.643592 8_2:+18004005 None:intergenic
ACATACCCTTCTGGAAATGG+TGG 0.643798 8_2:+17999260 None:intergenic
AAGACGAGGTTACGATCGAG+TGG 0.652262 8_2:+18003955 None:intergenic
GTGAGTTGAGAGGAATCGAG+TGG 0.672007 8_2:+18003859 None:intergenic
CCGGTCATGTCGGTTCCCGG+TGG 0.674640 8_2:+18004015 None:intergenic
AAGCGAAGTAATCGAAGACG+AGG 0.677731 8_2:+18003941 None:intergenic
AGACGAGGTTACGATCGAGT+GGG 0.681742 8_2:+18003956 None:intergenic
GGAATGGGAATGTTAGACGG+CGG 0.769986 8_2:-18004054 Msa1238150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTTTTATTTCAAATATT+TGG - chr8_2:18000003-18000022 Msa1238150:intron 10.0%
!!! AAAATAGATTTTTTTTTTAG+AGG - chr8_2:18001180-18001199 Msa1238150:CDS 10.0%
!!! AAAAAAAGTGATTTTTATTA+CGG - chr8_2:18001296-18001315 Msa1238150:intron 10.0%
!! CAAAAAATAAATAAAATCAT+TGG + chr8_2:18001779-18001798 None:intergenic 10.0%
!! TAATTTATTTATTACAACTT+TGG - chr8_2:18003178-18003197 Msa1238150:intron 10.0%
!! ATTAAAAAAGAAGTAATTAT+GGG + chr8_2:18003434-18003453 None:intergenic 10.0%
!! AATTAAAAAAGAAGTAATTA+TGG + chr8_2:18003435-18003454 None:intergenic 10.0%
!! TTGAATAAAATTAGAAAAGA+TGG + chr8_2:17999485-17999504 None:intergenic 15.0%
!!! TTATTAAGCAATTTTGTTTA+TGG - chr8_2:18000428-18000447 Msa1238150:intron 15.0%
!! TATTAACTATAAATGTGTAA+CGG + chr8_2:18000458-18000477 None:intergenic 15.0%
!!! TTTTAAAAAGTTGTAACAAA+CGG + chr8_2:18001081-18001100 None:intergenic 15.0%
!!! AACAAATAATTTAGTTTGTT+TGG + chr8_2:18001275-18001294 None:intergenic 15.0%
!!! TTATTTTAATCCTTAACAAA+CGG - chr8_2:18001400-18001419 Msa1238150:intron 15.0%
!! GAAATAATTTGAACTATTTA+TGG - chr8_2:18002100-18002119 Msa1238150:intron 15.0%
!!! TATACAGAAATTTTAGATAA+AGG + chr8_2:18003098-18003117 None:intergenic 15.0%
!!! TACTTCTTTTTTAATTCAAT+AGG - chr8_2:18003439-18003458 Msa1238150:intron 15.0%
!!! AAAAAGAATGAAATTTTGAT+AGG - chr8_2:18003892-18003911 Msa1238150:CDS 15.0%
!! AAAACAATCTTAATTATCAT+TGG - chr8_2:18004107-18004126 Msa1238150:five_prime_UTR 15.0%
!! TGAAATTGAGAATGAAAATT+AGG + chr8_2:17999224-17999243 None:intergenic 20.0%
!! AAAATATAATAAGCAAGCAT+TGG + chr8_2:17999383-17999402 None:intergenic 20.0%
!!! AATGCTTGCTTATTATATTT+TGG - chr8_2:17999382-17999401 Msa1238150:intron 20.0%
!!! TTTATTTCAAATATTTGGTG+TGG - chr8_2:18000008-18000027 Msa1238150:intron 20.0%
!!! TTCTATCACATTTTTATACA+GGG + chr8_2:18000364-18000383 None:intergenic 20.0%
!!! TTTCTATCACATTTTTATAC+AGG + chr8_2:18000365-18000384 None:intergenic 20.0%
!! TATAGTTAATAGTGTTTGTT+TGG - chr8_2:18000467-18000486 Msa1238150:intron 20.0%
!! ATAGTTAATAGTGTTTGTTT+GGG - chr8_2:18000468-18000487 Msa1238150:intron 20.0%
!!! TTTTCAAAATCCAAAAACTA+AGG + chr8_2:18000964-18000983 None:intergenic 20.0%
!! TTAAAAAAGCTATAACAAAC+GGG + chr8_2:18001007-18001026 None:intergenic 20.0%
!! CTTAAAAAAGCTATAACAAA+CGG + chr8_2:18001008-18001027 None:intergenic 20.0%
!! TTGGATACAACTATATAAAA+GGG + chr8_2:18001256-18001275 None:intergenic 20.0%
!! TTTGGATACAACTATATAAA+AGG + chr8_2:18001257-18001276 None:intergenic 20.0%
!!! TATTTTAATCCTTAACAAAC+GGG - chr8_2:18001401-18001420 Msa1238150:intron 20.0%
!! TTAATAAAAAAGAAAGGGAT+AGG - chr8_2:18002024-18002043 Msa1238150:intron 20.0%
!! CACAATTTCATAAAATACTT+GGG + chr8_2:18002073-18002092 None:intergenic 20.0%
!! ACACAATTTCATAAAATACT+TGG + chr8_2:18002074-18002093 None:intergenic 20.0%
!! AATTGGAAAGATTAAATAAG+AGG + chr8_2:18002363-18002382 None:intergenic 20.0%
!! TTAGTTAAATTCCTATAGTT+AGG + chr8_2:18003591-18003610 None:intergenic 20.0%
!! TGATTAATGTTTATTCCTTT+CGG - chr8_2:18003927-18003946 Msa1238150:CDS 20.0%
!! GTTAACTTTATGTTATTCTT+TGG - chr8_2:18003970-18003989 Msa1238150:CDS 20.0%
!! ATTTCAGTTTAGTCAATATA+TGG - chr8_2:18004068-18004087 Msa1238150:CDS 20.0%
! AATGAAAATTAGGTTAGGTT+AGG + chr8_2:17999214-17999233 None:intergenic 25.0%
! TTGAGAATGAAAATTAGGTT+AGG + chr8_2:17999219-17999238 None:intergenic 25.0%
!!! TTTCACTCTTAACCATTTTT+AGG - chr8_2:17999253-17999272 Msa1238150:CDS 25.0%
!!! TTCACTCTTAACCATTTTTA+GGG - chr8_2:17999254-17999273 Msa1238150:CDS 25.0%
! TTCTTCATGATAAAAAGATG+AGG + chr8_2:17999329-17999348 None:intergenic 25.0%
!!! CTTGCTTATTATATTTTGGA+TGG - chr8_2:17999386-17999405 Msa1238150:intron 25.0%
! GGCACTATATTATATTGAAA+AGG - chr8_2:18000082-18000101 Msa1238150:intron 25.0%
!! TGTCATGATTTTTGATATGA+TGG - chr8_2:18000233-18000252 Msa1238150:intron 25.0%
!!! CAGTTTTTTTAATAGCAGTT+TGG + chr8_2:18000526-18000545 None:intergenic 25.0%
!!! AAGCTTTATTTCACAATAGA+AGG + chr8_2:18000652-18000671 None:intergenic 25.0%
! ATGTTACTGTTATTGTTCTA+AGG + chr8_2:18000684-18000703 None:intergenic 25.0%
! TAACGAAATTATGCAAAAAG+GGG + chr8_2:18000765-18000784 None:intergenic 25.0%
! CTAACGAAATTATGCAAAAA+GGG + chr8_2:18000766-18000785 None:intergenic 25.0%
! TCTAACGAAATTATGCAAAA+AGG + chr8_2:18000767-18000786 None:intergenic 25.0%
! TCTGTATTACATAGTAATTG+TGG + chr8_2:18000933-18000952 None:intergenic 25.0%
! TGGATACAACTATATAAAAG+GGG + chr8_2:18001255-18001274 None:intergenic 25.0%
! AGGAAGAACATAAGATATAA+TGG + chr8_2:18001726-18001745 None:intergenic 25.0%
! TAAAAATTTCAACAAGAACG+TGG + chr8_2:18001755-18001774 None:intergenic 25.0%
!! ATTGTTTGAAAAGTACACAA+TGG + chr8_2:18001971-18001990 None:intergenic 25.0%
! AAGAGGATATTAATTTACTC+AGG + chr8_2:18002346-18002365 None:intergenic 25.0%
!!! ACTATTCTATTTCTAACCAT+AGG - chr8_2:18002850-18002869 Msa1238150:intron 25.0%
!!! CTATTCTATTTCTAACCATA+GGG - chr8_2:18002851-18002870 Msa1238150:intron 25.0%
!! TCTATTCTTCTTAGTTCTTA+TGG + chr8_2:18003403-18003422 None:intergenic 25.0%
!! CAAAATTTCATTCTTTTTGC+AGG + chr8_2:18003890-18003909 None:intergenic 25.0%
!!! AATGAAATTTTGATAGGTAC+AGG - chr8_2:18003898-18003917 Msa1238150:CDS 25.0%
! GATTAATGTTTATTCCTTTC+GGG - chr8_2:18003928-18003947 Msa1238150:CDS 25.0%
! ACATAAAGTTAACCATCTTT+CGG + chr8_2:18003963-18003982 None:intergenic 25.0%
TATGCTTCAGAGATCAATTA+TGG - chr8_2:17999040-17999059 Msa1238150:three_prime_UTR 30.0%
AATTAGGTTAGGTTAGGTTA+CGG + chr8_2:17999208-17999227 None:intergenic 30.0%
!!! TTAACCATTTTTAGGGTTTC+AGG - chr8_2:17999261-17999280 Msa1238150:CDS 30.0%
! TTTTCCTGAAACCCTAAAAA+TGG + chr8_2:17999268-17999287 None:intergenic 30.0%
ATATGTGTTGAGTGAAGTTA+TGG - chr8_2:17999301-17999320 Msa1238150:intron 30.0%
GCAAAAACATTGGATAATTG+AGG + chr8_2:17999428-17999447 None:intergenic 30.0%
AATTCTAGCAGCAAAAACAT+TGG + chr8_2:17999438-17999457 None:intergenic 30.0%
AATCTCAAATATTAGTGTCG+TGG - chr8_2:17999569-17999588 Msa1238150:intron 30.0%
! ATGAAGTGTTAGTGTATGTT+TGG - chr8_2:17999651-17999670 Msa1238150:intron 30.0%
TCAAGTAGAATCAATTCTTG+TGG + chr8_2:17999764-17999783 None:intergenic 30.0%
TTTGTGACATTGATCTTGTA+GGG - chr8_2:18000056-18000075 Msa1238150:intron 30.0%
!!! GATTTTTTCTCTCTCTCTTT+TGG - chr8_2:18000155-18000174 Msa1238150:intron 30.0%
GTTAAGAACTTTGATGTCAA+CGG - chr8_2:18000308-18000327 Msa1238150:intron 30.0%
! TTTTATACAGGGTCTAAGAA+AGG + chr8_2:18000353-18000372 None:intergenic 30.0%
AAATGTGATAGAAACTTTGC+AGG - chr8_2:18000371-18000390 Msa1238150:intron 30.0%
AATGTGATAGAAACTTTGCA+GGG - chr8_2:18000372-18000391 Msa1238150:intron 30.0%
! AATAGCAGTTTGGTTCATTT+CGG + chr8_2:18000516-18000535 None:intergenic 30.0%
! ATATTGCTATTACGATGTGA+TGG - chr8_2:18000822-18000841 Msa1238150:intron 30.0%
TCCCATTAAGTGAATAGTAT+CGG + chr8_2:18000859-18000878 None:intergenic 30.0%
TTTAGAGGAGAGAGAAAATA+TGG - chr8_2:18001195-18001214 Msa1238150:intron 30.0%
!!! ACTGGTTTTCAACAGATTAA+GGG + chr8_2:18001427-18001446 None:intergenic 30.0%
!!! AACTGGTTTTCAACAGATTA+AGG + chr8_2:18001428-18001447 None:intergenic 30.0%
TAATCTGTTGAAAACCAGTT+TGG - chr8_2:18001428-18001447 Msa1238150:intron 30.0%
ATACCTCAACAATGGAAAAA+GGG + chr8_2:18001602-18001621 None:intergenic 30.0%
TATACCTCAACAATGGAAAA+AGG + chr8_2:18001603-18001622 None:intergenic 30.0%
! TTTTTCCATTGTTGAGGTAT+AGG - chr8_2:18001602-18001621 Msa1238150:intron 30.0%
CTTAAAAGAAATTAAGCGAG+TGG - chr8_2:18001897-18001916 Msa1238150:intron 30.0%
ATTACATAGCACATCATTAG+AGG - chr8_2:18001989-18002008 Msa1238150:intron 30.0%
! TCTTACTGATTAGTAGTTTG+TGG - chr8_2:18002580-18002599 Msa1238150:intron 30.0%
! CTTACTGATTAGTAGTTTGT+GGG - chr8_2:18002581-18002600 Msa1238150:intron 30.0%
! CTCTATGTTTCTGAAAAAAG+AGG + chr8_2:18002627-18002646 None:intergenic 30.0%
GTTTGACAGAACAACATAAA+AGG + chr8_2:18002832-18002851 None:intergenic 30.0%
AGTTTGACAGAACAACATAA+AGG + chr8_2:18002833-18002852 None:intergenic 30.0%
ATCATTACTAGTAACCAATG+AGG + chr8_2:18002955-18002974 None:intergenic 30.0%
!!! AAGTTTTTTCTCCTTTTCAC+AGG - chr8_2:18003359-18003378 Msa1238150:intron 30.0%
!!! AGTTTTTTCTCCTTTTCACA+GGG - chr8_2:18003360-18003379 Msa1238150:intron 30.0%
ACTAAGAAGAATAGAAGTCT+TGG - chr8_2:18003408-18003427 Msa1238150:intron 30.0%
TGTTGTCGAAAAGTTATTTG+CGG - chr8_2:18003495-18003514 Msa1238150:intron 30.0%
!! CTCTGGTTTGTTATTACAAA+AGG + chr8_2:18003544-18003563 None:intergenic 30.0%
! CTTTTGTAATAACAAACCAG+AGG - chr8_2:18003542-18003561 Msa1238150:intron 30.0%
GTTAAATTCCTATAGTTAGG+AGG + chr8_2:18003588-18003607 None:intergenic 30.0%
TTGCTGATAAACACAAACTT+AGG - chr8_2:18003629-18003648 Msa1238150:CDS 30.0%
CATAAAGTTAACCATCTTTC+GGG + chr8_2:18003962-18003981 None:intergenic 30.0%
CACAGTGATATTTACATTCA+TGG + chr8_2:18004027-18004046 None:intergenic 30.0%
!!! ATTGTTTTTGCTTACACTGT+CGG + chr8_2:18004095-18004114 None:intergenic 30.0%
!! TTGATCTCTGAAGCATATTC+CGG + chr8_2:17999037-17999056 None:intergenic 35.0%
CTTTATCACCTTTCTACGAT+TGG - chr8_2:17999109-17999128 Msa1238150:three_prime_UTR 35.0%
TTAGAAGTCCAATCGTAGAA+AGG + chr8_2:17999120-17999139 None:intergenic 35.0%
ATTAGGTTAGGTTAGGTTAC+GGG + chr8_2:17999207-17999226 None:intergenic 35.0%
TAGGGTTTCAGGAAAATGAT+TGG - chr8_2:17999272-17999291 Msa1238150:CDS 35.0%
TTATCATGAAGAAGCAGAAG+AGG - chr8_2:17999336-17999355 Msa1238150:intron 35.0%
TATCATGAAGAAGCAGAAGA+GGG - chr8_2:17999337-17999356 Msa1238150:intron 35.0%
! AGCATTGGAGTAACTTTATC+AGG + chr8_2:17999368-17999387 None:intergenic 35.0%
TCAACAAACCTTATGTAGAC+CGG - chr8_2:17999501-17999520 Msa1238150:intron 35.0%
!! TGTATGTTTGGTTCCACTTT+TGG - chr8_2:17999663-17999682 Msa1238150:intron 35.0%
! AATTTTGTCTCCTCCAAAAG+TGG + chr8_2:17999679-17999698 None:intergenic 35.0%
!! TCTTGCTACAATTGAGTTGA+AGG + chr8_2:17999886-17999905 None:intergenic 35.0%
GTTTGTGACATTGATCTTGT+AGG - chr8_2:18000055-18000074 Msa1238150:intron 35.0%
AAGTTGGAGAAGATAGGATA+TGG - chr8_2:18000125-18000144 Msa1238150:intron 35.0%
!! TTTCTCTCTCTCTTTTGGTT+TGG - chr8_2:18000160-18000179 Msa1238150:intron 35.0%
! GTTTGTTACTCACGAAAACA+AGG - chr8_2:18000194-18000213 Msa1238150:intron 35.0%
AACTTGTAATGCCTAGACTT+CGG - chr8_2:18000605-18000624 Msa1238150:intron 35.0%
GTGAAATAAAGCTTCAGTTC+AGG - chr8_2:18000658-18000677 Msa1238150:intron 35.0%
ACTCAAACAAAATCACCATG+AGG + chr8_2:18000736-18000755 None:intergenic 35.0%
GCCGATACTATTCACTTAAT+GGG - chr8_2:18000855-18000874 Msa1238150:intron 35.0%
ACTATGTAATACAGAGTGAG+TGG - chr8_2:18000938-18000957 Msa1238150:intron 35.0%
TTATGTGATTCAGTGCACTA+TGG + chr8_2:18001467-18001486 None:intergenic 35.0%
ACTGAATCACATAACCAGTT+TGG - chr8_2:18001473-18001492 Msa1238150:intron 35.0%
ATCACATAACCAGTTTGGTT+TGG - chr8_2:18001478-18001497 Msa1238150:intron 35.0%
GAAACAATTGCAGTTTGGTT+CGG - chr8_2:18001508-18001527 Msa1238150:intron 35.0%
! GGCTAGGCTTTTAAATAGTT+TGG + chr8_2:18001565-18001584 None:intergenic 35.0%
AACATCCTATACCTCAACAA+TGG + chr8_2:18001610-18001629 None:intergenic 35.0%
GCAAATAGCAACATCATACA+TGG + chr8_2:18001642-18001661 None:intergenic 35.0%
!! ATGTTGCTATTTGCAAACTG+TGG - chr8_2:18001648-18001667 Msa1238150:intron 35.0%
GGAATGCATGAAAAATCAGA+TGG + chr8_2:18001705-18001724 None:intergenic 35.0%
ATTTCAACAAGAACGTGGAT+TGG + chr8_2:18001750-18001769 None:intergenic 35.0%
TTTGACTCTGTGCTCATTAA+CGG - chr8_2:18001795-18001814 Msa1238150:intron 35.0%
TGAAAACGAGACTACAATTC+CGG - chr8_2:18001846-18001865 Msa1238150:intron 35.0%
!!! TTGTTTTTGTGCGATTTGTG+AGG - chr8_2:18002250-18002269 Msa1238150:intron 35.0%
CAGTAAGATTGTGATGAGAT+GGG + chr8_2:18002568-18002587 None:intergenic 35.0%
TCAGTAAGATTGTGATGAGA+TGG + chr8_2:18002569-18002588 None:intergenic 35.0%
AACCAAGCATGTGAAGAATA+GGG + chr8_2:18002763-18002782 None:intergenic 35.0%
AAACCAAGCATGTGAAGAAT+AGG + chr8_2:18002764-18002783 None:intergenic 35.0%
ACTATTCCATTTCTAACCGT+AGG - chr8_2:18002908-18002927 Msa1238150:CDS 35.0%
CTATTCCATTTCTAACCGTA+GGG - chr8_2:18002909-18002928 Msa1238150:CDS 35.0%
! TCATCTCACTGTAGCTTTTA+TGG - chr8_2:18003137-18003156 Msa1238150:intron 35.0%
! CATCTCACTGTAGCTTTTAT+GGG - chr8_2:18003138-18003157 Msa1238150:intron 35.0%
! ATCTCACTGTAGCTTTTATG+GGG - chr8_2:18003139-18003158 Msa1238150:intron 35.0%
GAGATTATCCCTTTCATTCT+AGG - chr8_2:18003215-18003234 Msa1238150:intron 35.0%
ACTGTCATCCTAGAATGAAA+GGG + chr8_2:18003226-18003245 None:intergenic 35.0%
AAGTGCAGTGATTACTGAAT+AGG - chr8_2:18003299-18003318 Msa1238150:intron 35.0%
TAATGTTCTTCCACTCAGAA+AGG + chr8_2:18003340-18003359 None:intergenic 35.0%
TTATGGCTAGATCAATCTCT+TGG + chr8_2:18003386-18003405 None:intergenic 35.0%
GTTGTCGAAAAGTTATTTGC+GGG - chr8_2:18003496-18003515 Msa1238150:intron 35.0%
TTGTCGAAAAGTTATTTGCG+GGG - chr8_2:18003497-18003516 Msa1238150:intron 35.0%
GCGGGGTAAAAATTAAATGA+TGG - chr8_2:18003514-18003533 Msa1238150:intron 35.0%
AATGTTTATTCCTTTCGGGA+AGG - chr8_2:18003932-18003951 Msa1238150:CDS 35.0%
! AATTACGTACGTGAGTTGAG+AGG + chr8_2:17999184-17999203 None:intergenic 40.0%
CTCAAATATTAGTGTCGTGG+CGG - chr8_2:17999572-17999591 Msa1238150:intron 40.0%
!! ATGTTTGGTTCCACTTTTGG+AGG - chr8_2:17999666-17999685 Msa1238150:intron 40.0%
TGTAGCGCTAAGTGTATGTT+TGG + chr8_2:17999945-17999964 None:intergenic 40.0%
CGCTACATACATACCTTGTA+GGG - chr8_2:17999958-17999977 Msa1238150:intron 40.0%
CGAAACTAGATAACCCTACA+AGG + chr8_2:17999974-17999993 None:intergenic 40.0%
TGACATTGATCTTGTAGGGA+AGG - chr8_2:18000060-18000079 Msa1238150:intron 40.0%
GACATTGATCTTGTAGGGAA+GGG - chr8_2:18000061-18000080 Msa1238150:intron 40.0%
TACTACAGCTGCATCTAAGT+TGG - chr8_2:18000109-18000128 Msa1238150:intron 40.0%
! GCATCTAAGTTGGAGAAGAT+AGG - chr8_2:18000119-18000138 Msa1238150:intron 40.0%
CACAATAGAAGGTTCACTGT+TGG + chr8_2:18000641-18000660 None:intergenic 40.0%
CACCTAGATTTATCACCTCA+TGG - chr8_2:18000718-18000737 Msa1238150:intron 40.0%
CACCATGAGGTGATAAATCT+AGG + chr8_2:18000723-18000742 None:intergenic 40.0%
GGCCGATACTATTCACTTAA+TGG - chr8_2:18000854-18000873 Msa1238150:intron 40.0%
GTTTCAATGCTGAACCAAAC+TGG + chr8_2:18001445-18001464 None:intergenic 40.0%
!! TAACCAGTTTGGTTTGGTTC+AGG - chr8_2:18001484-18001503 Msa1238150:intron 40.0%
CAGGTGAAACAATTGCAGTT+TGG - chr8_2:18001503-18001522 Msa1238150:intron 40.0%
!!! TTTGGTTCGGTTTTCTCTTG+TGG - chr8_2:18001521-18001540 Msa1238150:intron 40.0%
! TTCGGTTTTCTCTTGTGGTT+CGG - chr8_2:18001526-18001545 Msa1238150:intron 40.0%
!! TTAACGGATTGTGCTTCTTC+TGG - chr8_2:18001811-18001830 Msa1238150:intron 40.0%
CTTAACACCCACAAAAGTCA+CGG - chr8_2:18002145-18002164 Msa1238150:intron 40.0%
! TTGTTATTCGCATGCTTGCA+TGG - chr8_2:18002411-18002430 Msa1238150:intron 40.0%
TGTTATTCGCATGCTTGCAT+GGG - chr8_2:18002412-18002431 Msa1238150:intron 40.0%
GGGAAACACATCATGAATAG+TGG - chr8_2:18002433-18002452 Msa1238150:intron 40.0%
! GAATAGTGGCTTCCTTTTCT+TGG - chr8_2:18002447-18002466 Msa1238150:intron 40.0%
CTCGAAGTAATGCCAAGAAA+AGG + chr8_2:18002462-18002481 None:intergenic 40.0%
GACGTGATTTACCACTTGTA+TGG + chr8_2:18002502-18002521 None:intergenic 40.0%
GATTGTGATGAGATGGGAAA+AGG + chr8_2:18002562-18002581 None:intergenic 40.0%
AACCTCTATTCTTCATGTGC+AGG - chr8_2:18002801-18002820 Msa1238150:intron 40.0%
GAATACTCAAAGAAGCCCTA+TGG + chr8_2:18002869-18002888 None:intergenic 40.0%
GAATACTCAAAGAAGCCCTA+CGG + chr8_2:18002869-18002888 None:intergenic 40.0%
ACTAGTAACCAATGAGGAGT+CGG + chr8_2:18002949-18002968 None:intergenic 40.0%
CAAGTCTTGAGCTAATACAC+AGG + chr8_2:18002989-18003008 None:intergenic 40.0%
TGAGATGACACACAGCAATA+AGG + chr8_2:18003125-18003144 None:intergenic 40.0%
CACTGTCATCCTAGAATGAA+AGG + chr8_2:18003227-18003246 None:intergenic 40.0%
TTCTCAGTTTCTGCTGTTGA+AGG + chr8_2:18003800-18003819 None:intergenic 40.0%
TCAACAGCAGAAACTGAGAA+AGG - chr8_2:18003800-18003819 Msa1238150:intron 40.0%
TCAAGTATGGGATCAACAGT+AGG + chr8_2:18003860-18003879 None:intergenic 40.0%
GTTGATCCCATACTTGATCA+AGG - chr8_2:18003863-18003882 Msa1238150:CDS 40.0%
GAAGCATATTCCGGTCATGT+CGG + chr8_2:17999028-17999047 None:intergenic 45.0%
AAGCGAAGTAATCGAAGACG+AGG + chr8_2:17999092-17999111 None:intergenic 45.0%
GTGGATGATGAGAACGCATT+CGG + chr8_2:17999155-17999174 None:intergenic 45.0%
AATGTCGATGTGTCAGTGTC+CGG + chr8_2:17999523-17999542 None:intergenic 45.0%
AAATATTAGTGTCGTGGCGG+TGG - chr8_2:17999575-17999594 Msa1238150:intron 45.0%
GCGCTACATACATACCTTGT+AGG - chr8_2:17999957-17999976 Msa1238150:intron 45.0%
ACGATGTGATGGTTAGCACT+TGG - chr8_2:18000833-18000852 Msa1238150:intron 45.0%
!! GAGTGAGTGGCCTTAGTTTT+TGG - chr8_2:18000951-18000970 Msa1238150:intron 45.0%
AAGCTGTTAAGAGCAAGAGC+AGG - chr8_2:18001144-18001163 Msa1238150:CDS 45.0%
! GATTAAGGGCCCGTTTGTTA+AGG + chr8_2:18001413-18001432 None:intergenic 45.0%
TCACCTGAACCAAACCAAAC+TGG + chr8_2:18001490-18001509 None:intergenic 45.0%
! TCGGTTTTCTCTTGTGGTTC+GGG - chr8_2:18001527-18001546 Msa1238150:intron 45.0%
AAAAGGGAGGAAAGCTACAG+AGG + chr8_2:18001586-18001605 None:intergenic 45.0%
CCTCAACAATGGAAAAAGGG+AGG + chr8_2:18001599-18001618 None:intergenic 45.0%
! CCTCCCTTTTTCCATTGTTG+AGG - chr8_2:18001596-18001615 Msa1238150:intron 45.0%
TTTGCAAACTGTGGCAAGCA+AGG - chr8_2:18001657-18001676 Msa1238150:intron 45.0%
!! CAACAAGAACGTGGATTGGA+AGG + chr8_2:18001746-18001765 None:intergenic 45.0%
GACTACAATTCCGGAACCAA+AGG - chr8_2:18001855-18001874 Msa1238150:intron 45.0%
TACAATTCCGGAACCAAAGG+CGG - chr8_2:18001858-18001877 Msa1238150:intron 45.0%
! GAAATCGCCGTGACTTTTGT+GGG + chr8_2:18002155-18002174 None:intergenic 45.0%
! AGAAATCGCCGTGACTTTTG+TGG + chr8_2:18002156-18002175 None:intergenic 45.0%
GTTATTCGCATGCTTGCATG+GGG - chr8_2:18002413-18002432 Msa1238150:intron 45.0%
! TACTTCGAGTTTCCCTGTTG+TGG - chr8_2:18002473-18002492 Msa1238150:intron 45.0%
GAACATGAGAGGCTGACTAA+GGG + chr8_2:18002661-18002680 None:intergenic 45.0%
TGAACATGAGAGGCTGACTA+AGG + chr8_2:18002662-18002681 None:intergenic 45.0%
ATGTTATGCCCGGAACAATG+CGG + chr8_2:18002722-18002741 None:intergenic 45.0%
CACCCTATTCTTCACATGCT+TGG - chr8_2:18002758-18002777 Msa1238150:intron 45.0%
GACCTGCACATGAAGAATAG+AGG + chr8_2:18002806-18002825 None:intergenic 45.0%
AGAAGCCCTACGGTTAGAAA+TGG + chr8_2:18002917-18002936 None:intergenic 45.0%
TGAGTATTCCGACTCCTCAT+TGG - chr8_2:18002938-18002957 Msa1238150:CDS 45.0%
CCACTCAGAAAGGAAGGATT+AGG + chr8_2:18003330-18003349 None:intergenic 45.0%
CCTAATCCTTCCTTTCTGAG+TGG - chr8_2:18003327-18003346 Msa1238150:intron 45.0%
GTTCTTCCACTCAGAAAGGA+AGG + chr8_2:18003336-18003355 None:intergenic 45.0%
AATCTCTTGGCCCTGTGAAA+AGG + chr8_2:18003373-18003392 None:intergenic 45.0%
TTAGGAGGACAAGCTGTGTT+GGG + chr8_2:18003573-18003592 None:intergenic 45.0%
CAGCTTGTCCTCCTAACTAT+AGG - chr8_2:18003577-18003596 Msa1238150:intron 45.0%
! ACATACCCTTCTGGAAATGG+TGG + chr8_2:18003773-18003792 None:intergenic 45.0%
! GGAACATACCCTTCTGGAAA+TGG + chr8_2:18003776-18003795 None:intergenic 45.0%
TCAGTTTCTGCTGTTGAAGG+TGG + chr8_2:18003797-18003816 None:intergenic 45.0%
GCAGGACCTTGATCAAGTAT+GGG + chr8_2:18003872-18003891 None:intergenic 45.0%
TGCAGGACCTTGATCAAGTA+TGG + chr8_2:18003873-18003892 None:intergenic 45.0%
!!! AAAATTTTAATAAAAAAGAA+AGG - chr8_2:18002018-18002037 Msa1238150:intron 5.0%
!!! AAATTTTAATAAAAAAGAAA+GGG - chr8_2:18002019-18002038 Msa1238150:intron 5.0%
! TCACAGCACTGAGAGAGAAC+CGG - chr8_2:17998933-17998952 Msa1238150:three_prime_UTR 50.0%
CCGTCTAACATTCCCATTCC+CGG + chr8_2:17998976-17998995 None:intergenic 50.0%
CCGGGAATGGGAATGTTAGA+CGG - chr8_2:17998973-17998992 Msa1238150:three_prime_UTR 50.0%
GGAATGGGAATGTTAGACGG+CGG - chr8_2:17998976-17998995 Msa1238150:three_prime_UTR 50.0%
AGACGAGGTTACGATCGAGT+GGG + chr8_2:17999077-17999096 None:intergenic 50.0%
AAGACGAGGTTACGATCGAG+TGG + chr8_2:17999078-17999097 None:intergenic 50.0%
! GTGAGTTGAGAGGAATCGAG+TGG + chr8_2:17999174-17999193 None:intergenic 50.0%
GTCAGTGTCCGGTCTACATA+AGG + chr8_2:17999512-17999531 None:intergenic 50.0%
TTGCGCTTGCGTTGCAATTG+TGG - chr8_2:18000281-18000300 Msa1238150:intron 50.0%
AAGGTCCACAGCCACACTAT+GGG + chr8_2:18000334-18000353 None:intergenic 50.0%
AAAGGTCCACAGCCACACTA+TGG + chr8_2:18000335-18000354 None:intergenic 50.0%
ATTGTCTCCTTAGCCGCCTT+TGG + chr8_2:18001874-18001893 None:intergenic 50.0%
TCTTGCTTCCTTGCAACGCA+AGG - chr8_2:18001927-18001946 Msa1238150:intron 50.0%
TCAACTCACCTTGCGTTGCA+AGG + chr8_2:18001938-18001957 None:intergenic 50.0%
CTTGTATGGCAGCCACAACA+GGG + chr8_2:18002488-18002507 None:intergenic 50.0%
ACTTGTATGGCAGCCACAAC+AGG + chr8_2:18002489-18002508 None:intergenic 50.0%
TGTTGTGGCTGCCATACAAG+TGG - chr8_2:18002488-18002507 Msa1238150:intron 50.0%
TTTCGCAGCTGCAACTTCGA+GGG - chr8_2:18002522-18002541 Msa1238150:intron 50.0%
CAGTGTGCTCGGGGAAAAAA+GGG + chr8_2:18002695-18002714 None:intergenic 50.0%
ACAGTGTGCTCGGGGAAAAA+AGG + chr8_2:18002696-18002715 None:intergenic 50.0%
AATGCGGTGAACAGTGTGCT+CGG + chr8_2:18002706-18002725 None:intergenic 50.0%
CACTGTTCACCGCATTGTTC+CGG - chr8_2:18002710-18002729 Msa1238150:intron 50.0%
ACTGTTCACCGCATTGTTCC+GGG - chr8_2:18002711-18002730 Msa1238150:intron 50.0%
GCTGTGTTGGGTAAAACCTC+TGG + chr8_2:18003561-18003580 None:intergenic 50.0%
GTTAGGAGGACAAGCTGTGT+TGG + chr8_2:18003574-18003593 None:intergenic 50.0%
! TACCCTTCTGGAAATGGTGG+CGG + chr8_2:18003770-18003789 None:intergenic 50.0%
GAAGGTGGAACATACCCTTC+TGG + chr8_2:18003782-18003801 None:intergenic 50.0%
TGAGAAAGGCCCTGAAACTC+AGG - chr8_2:18003814-18003833 Msa1238150:intron 50.0%
CAGCTGCTTCCTGAGTTTCA+GGG + chr8_2:18003826-18003845 None:intergenic 50.0%
TCAGCTGCTTCCTGAGTTTC+AGG + chr8_2:18003827-18003846 None:intergenic 50.0%
!! ATTCCGGTCATGTCGGTTCC+CGG + chr8_2:17999021-17999040 None:intergenic 55.0%
GATGTCAACGGCCCATAGTG+TGG - chr8_2:18000320-18000339 Msa1238150:intron 55.0%
GGAGGAAAGCTACAGAGGCT+AGG + chr8_2:18001581-18001600 None:intergenic 55.0%
! TCCTTAGCCGCCTTTGGTTC+CGG + chr8_2:18001868-18001887 None:intergenic 55.0%
CTTTCGCAGCTGCAACTTCG+AGG - chr8_2:18002521-18002540 Msa1238150:intron 55.0%
! CTCTGGGGGTTGAACATGAG+AGG + chr8_2:18002672-18002691 None:intergenic 55.0%
TCGGGGAAAAAAGGGCTCTG+GGG + chr8_2:18002687-18002706 None:intergenic 55.0%
CTCGGGGAAAAAAGGGCTCT+GGG + chr8_2:18002688-18002707 None:intergenic 55.0%
ATGCGGTGAACAGTGTGCTC+GGG + chr8_2:18002705-18002724 None:intergenic 55.0%
CTCCGCCACCATTTCCAGAA+GGG - chr8_2:18003765-18003784 Msa1238150:intron 55.0%
GTCCACTGCACTTCGCTACA+CGG - chr8_2:18004139-18004158 Msa1238150:five_prime_UTR 55.0%
CACTGAGAGAGAACCGGTGC+CGG - chr8_2:17998939-17998958 Msa1238150:three_prime_UTR 60.0%
!! ATTCCCGGTGTCGCCATCTC+CGG + chr8_2:17998961-17998980 None:intergenic 60.0%
GAGATGGCGACACCGGGAAT+GGG - chr8_2:17998961-17998980 Msa1238150:three_prime_UTR 60.0%
!! GTTAGACGGCGGAGTACCGA+CGG - chr8_2:17998987-17999006 Msa1238150:three_prime_UTR 60.0%
AACGGCCCATAGTGTGGCTG+TGG - chr8_2:18000326-18000345 Msa1238150:intron 60.0%
GTCGCAGCTCACCGAAGTCT+AGG + chr8_2:18000619-18000638 None:intergenic 60.0%
TCCGGAACCAAAGGCGGCTA+AGG - chr8_2:18001864-18001883 Msa1238150:intron 60.0%
! CGGGGAAAAAAGGGCTCTGG+GGG + chr8_2:18002686-18002705 None:intergenic 60.0%
GCTCGGGGAAAAAAGGGCTC+TGG + chr8_2:18002689-18002708 None:intergenic 60.0%
TGCGGTGAACAGTGTGCTCG+GGG + chr8_2:18002704-18002723 None:intergenic 60.0%
CAGGTGCGGCATGTTATGCC+CGG + chr8_2:18002732-18002751 None:intergenic 60.0%
GAAGAATAGGGTGCGCGTGC+AGG + chr8_2:18002751-18002770 None:intergenic 60.0%
!! TCTGGAAATGGTGGCGGAGG+CGG + chr8_2:18003764-18003783 None:intergenic 60.0%
!! CCTTCTGGAAATGGTGGCGG+AGG + chr8_2:18003767-18003786 None:intergenic 60.0%
CCTCCGCCACCATTTCCAGA+AGG - chr8_2:18003764-18003783 Msa1238150:intron 60.0%
TTCGGGTACGCCTTCCCGAA+AGG + chr8_2:18003945-18003964 None:intergenic 60.0%
! GGGAAGGCGTACCCGAAAGA+TGG - chr8_2:18003948-18003967 Msa1238150:CDS 60.0%
GTCCGTGTAGCGAAGTGCAG+TGG + chr8_2:18004144-18004163 None:intergenic 60.0%
! GAGAGAACCGGTGCCGGAGA+TGG - chr8_2:17998945-17998964 Msa1238150:three_prime_UTR 65.0%
GGAGATGGCGACACCGGGAA+TGG - chr8_2:17998960-17998979 Msa1238150:three_prime_UTR 65.0%
!! AGTACCGACGGCGCAACCAC+CGG - chr8_2:17998999-17999018 Msa1238150:three_prime_UTR 65.0%
CCACCGGGAACCGACATGAC+CGG - chr8_2:17999015-17999034 Msa1238150:three_prime_UTR 65.0%
ATAGGGTGCGCGTGCAGGTG+CGG + chr8_2:18002746-18002765 None:intergenic 65.0%
! GGTGTCGCCATCTCCGGCAC+CGG + chr8_2:17998955-17998974 None:intergenic 70.0%
! GGTGCCGGAGATGGCGACAC+CGG - chr8_2:17998954-17998973 Msa1238150:three_prime_UTR 70.0%
GTGCCGGAGATGGCGACACC+GGG - chr8_2:17998955-17998974 Msa1238150:three_prime_UTR 70.0%
! GTACCGACGGCGCAACCACC+GGG - chr8_2:17999000-17999019 Msa1238150:three_prime_UTR 70.0%
GTTCCCGGTGGTTGCGCCGT+CGG + chr8_2:17999006-17999025 None:intergenic 70.0%
!! CCGGTCATGTCGGTTCCCGG+TGG + chr8_2:17999018-17999037 None:intergenic 70.0%
!! AATGGTGGCGGAGGCGGAGC+AGG + chr8_2:18003758-18003777 None:intergenic 70.0%
!!! GGTGGCGGAGGCGGAGCAGG+TGG + chr8_2:18003755-18003774 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 17998884 18004168 17998884 ID=Msa1238150;Name=Msa1238150
chr8_2 mRNA 17998884 18004168 17998884 ID=Msa1238150-mRNA-1;Parent=Msa1238150;Name=Msa1238150-mRNA-1;_AED=0.07;_eAED=0.07;_QI=80|0.75|0.8|1|1|1|5|258|242
chr8_2 exon 17998884 17999303 17998884 ID=Msa1238150-mRNA-1:exon:6839;Parent=Msa1238150-mRNA-1
chr8_2 exon 18001104 18001213 18001104 ID=Msa1238150-mRNA-1:exon:6838;Parent=Msa1238150-mRNA-1
chr8_2 exon 18002906 18002975 18002906 ID=Msa1238150-mRNA-1:exon:6837;Parent=Msa1238150-mRNA-1
chr8_2 exon 18003613 18003769 18003613 ID=Msa1238150-mRNA-1:exon:6836;Parent=Msa1238150-mRNA-1
chr8_2 exon 18003859 18004168 18003859 ID=Msa1238150-mRNA-1:exon:6835;Parent=Msa1238150-mRNA-1
chr8_2 five_prime_UTR 18004089 18004168 18004089 ID=Msa1238150-mRNA-1:five_prime_utr;Parent=Msa1238150-mRNA-1
chr8_2 CDS 18003859 18004088 18003859 ID=Msa1238150-mRNA-1:cds;Parent=Msa1238150-mRNA-1
chr8_2 CDS 18003613 18003769 18003613 ID=Msa1238150-mRNA-1:cds;Parent=Msa1238150-mRNA-1
chr8_2 CDS 18002906 18002975 18002906 ID=Msa1238150-mRNA-1:cds;Parent=Msa1238150-mRNA-1
chr8_2 CDS 18001104 18001213 18001104 ID=Msa1238150-mRNA-1:cds;Parent=Msa1238150-mRNA-1
chr8_2 CDS 17999142 17999303 17999142 ID=Msa1238150-mRNA-1:cds;Parent=Msa1238150-mRNA-1
chr8_2 three_prime_UTR 17998884 17999141 17998884 ID=Msa1238150-mRNA-1:three_prime_utr;Parent=Msa1238150-mRNA-1
Gene Sequence

>Msa1238150

ATGGCGACACCGGGAATGGGAATGTTAGACGGCGGAGTACCGACGGCGCAACCACCGGGAACCGACATGACCGGAATATGCTTCAGAGATCAATTATGGTTAAACACATACCCACTCGATCGTAACCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCTAACAACGAACAACTCCGAATGCGTTCTCATCATCCACTCGATTCCTCTCAACTCACGAAAATGATTGGTATAGAATATGTGTTGAGTGAAGTTATGGAACCTCATCTTTTTATCATGAAGAAGCAGAAGAGGGATAGTCCTGATAAAGTTACTCCAATGCTTGCTTATTATATTTTGGATGGTTCTATTTATCAAGCTCCTCAATTATCCAATGGAAGGGCACTATATTATATTGAAAAGGCATTTACTACAGCTGCATCTAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTACAATTCCGGAACCAAAGGCGGCTAAGGAGACAATTGACTTAAAAGAAATTAAGCGAGTGGATCATATTCTTGCTTCCTTGCAACGCAAGCTTCCACCTGCTCCGCCTCCGCCACCATTTCCAGAAGGGTATGTTCCACCTTCAACAGCAGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAGCTGAGTCACTAGCACCTACTGTTGATCCCATACTTGATCAAGGTCCTGCAAAAAGAATGAAATTTTGA
Protein sequence

>Msa1238150

MATPGMGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKAAKETIDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMKF*