Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238230 | XP_013444884.1 | 92.604 | 649 | 28 | 1 | 1 | 629 | 1 | 649 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238230 | A0A072TN59 | 92.604 | 649 | 28 | 1 | 1 | 629 | 1 | 649 | 0.0 | 1201 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1191370 | Msa1238230 | 0.866021 | 3.865051e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238230 | MtrunA17_Chr8g0349381 | 92.604 | 649 | 28 | 1 | 1 | 629 | 1 | 649 | 0.0 | 1201 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1238230 | AT1G01770.1 | 67.925 | 636 | 172 | 7 | 12 | 627 | 8 | 631 | 0.0 | 861 |
Find 185 sgRNAs with CRISPR-Local
Find 447 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATACTTTCTTATATAAT+TGG | 0.110694 | 8_2:-18220797 | Msa1238230:CDS |
| GAACAATTACTCTATGAAAT+TGG | 0.161560 | 8_2:-18221528 | Msa1238230:CDS |
| GACAAATATTTATATGAAAA+TGG | 0.179445 | 8_2:-18225427 | Msa1238230:five_prime_UTR |
| AACCTTATCCCTTCGCCTTT+TGG | 0.197722 | 8_2:+18224111 | None:intergenic |
| CCGCCGGTGGTGGCGGTATC+AGG | 0.235370 | 8_2:-18220622 | Msa1238230:intron |
| AACTTGCATAATTACCAATA+TGG | 0.275625 | 8_2:-18223445 | Msa1238230:CDS |
| ATCAGCGGTTTCACCTCTTC+TGG | 0.288463 | 8_2:-18218991 | Msa1238230:CDS |
| CAAGAAATCAAAGAGATAAA+TGG | 0.297592 | 8_2:-18218941 | Msa1238230:CDS |
| AACAATTACTCTATGAAATT+GGG | 0.299395 | 8_2:-18221527 | Msa1238230:CDS |
| ATTACAGGTCATTGACTTCC+AGG | 0.306261 | 8_2:-18221383 | Msa1238230:intron |
| TGTTTCAACCTCTCGATATC+AGG | 0.306477 | 8_2:+18219038 | None:intergenic |
| TTGTTCTATTGCATGGAAAT+TGG | 0.317871 | 8_2:+18225365 | None:intergenic |
| ATTGGGTGTGGAGCAGGATT+TGG | 0.322942 | 8_2:-18224085 | Msa1238230:CDS |
| TGAGGAGGATTTATCGGTTT+CGG | 0.323533 | 8_2:+18219193 | None:intergenic |
| ATAGTAACCTTTCAAGCCTT+TGG | 0.336089 | 8_2:-18225502 | None:intergenic |
| ACCAACTCCAGAAGTTTATC+TGG | 0.339557 | 8_2:+18221289 | None:intergenic |
| GATGAATATGCTGCTACCTT+TGG | 0.345618 | 8_2:-18223481 | Msa1238230:CDS |
| AAATTCTGAGGAGGATTTAT+CGG | 0.348422 | 8_2:+18219187 | None:intergenic |
| CTTGATGTAATTATCACATT+TGG | 0.348982 | 8_2:+18222388 | None:intergenic |
| GGATGGGGAGAGATATCTTA+TGG | 0.351860 | 8_2:-18221059 | Msa1238230:CDS |
| ATTCTTACTAGCACCCATAT+TGG | 0.353195 | 8_2:+18223431 | None:intergenic |
| ACCAGTTCCAGATAAACTTC+TGG | 0.354388 | 8_2:-18221296 | Msa1238230:CDS |
| TTGTGCTATGGTGATTATTA+TGG | 0.354723 | 8_2:-18218719 | Msa1238230:three_prime_UTR |
| AGACGAATACTGAAGATATT+AGG | 0.357654 | 8_2:-18220727 | Msa1238230:CDS |
| TAAAACTTAAACTGTTGTTT+TGG | 0.357721 | 8_2:+18225455 | None:intergenic |
| CGTTGCTGCTAGCAGCTTTG+AGG | 0.360697 | 8_2:+18220765 | None:intergenic |
| GCATCTAGCTCAAGGATCTT+TGG | 0.367705 | 8_2:-18222003 | Msa1238230:CDS |
| TTTATGAACTAGGTTGGAAC+TGG | 0.373616 | 8_2:-18222037 | Msa1238230:CDS |
| AGTGGAGATATACGAAGTTA+AGG | 0.377512 | 8_2:-18218901 | Msa1238230:CDS |
| CAATTATATAAGAAAGTATA+TGG | 0.381854 | 8_2:+18220798 | None:intergenic |
| AGTCAAAGAACTAAATTATC+TGG | 0.383294 | 8_2:-18224023 | Msa1238230:CDS |
| TATGCTGCTACCTTTGGCTT+TGG | 0.387976 | 8_2:-18223475 | Msa1238230:CDS |
| ATATACTTTCTTATATAATT+GGG | 0.391627 | 8_2:-18220796 | Msa1238230:CDS |
| GTTTCTAAAAGTGGATCCTC+TGG | 0.399434 | 8_2:-18223259 | Msa1238230:intron |
| AGTTGTAGAGTTCTCTGTTC+GGG | 0.399885 | 8_2:-18221337 | Msa1238230:CDS |
| GTGGAGATATACGAAGTTAA+GGG | 0.401550 | 8_2:-18218900 | Msa1238230:CDS |
| CATAGCAGAGCTGGAGATAA+GGG | 0.402527 | 8_2:-18219098 | Msa1238230:CDS |
| TGCTTTATTCTTAGCACCTA+TGG | 0.403777 | 8_2:-18222353 | Msa1238230:intron |
| AGAACTCTACAACTTGATAA+TGG | 0.409393 | 8_2:+18221346 | None:intergenic |
| TGGATGGAAGAAATATTTCC+TGG | 0.411706 | 8_2:-18220830 | Msa1238230:CDS |
| TCCCAAAAGGCGAAGGGATA+AGG | 0.411944 | 8_2:-18224113 | Msa1238230:CDS |
| TATGTCCTTCCAGCAACTAC+TGG | 0.416540 | 8_2:-18221649 | Msa1238230:CDS |
| AGGATTGTGGATGGAAAGGA+TGG | 0.416631 | 8_2:-18221076 | Msa1238230:CDS |
| GCACAATATAAGATCTGAAA+TGG | 0.424247 | 8_2:+18218794 | None:intergenic |
| CCACTCTGAATAAAGTATAT+AGG | 0.424754 | 8_2:+18218643 | None:intergenic |
| CTACCTTTGGCTTTGGAAAG+AGG | 0.425238 | 8_2:-18223468 | Msa1238230:CDS |
| TTTACAGCGTTGTATACAAA+TGG | 0.427505 | 8_2:-18220647 | Msa1238230:CDS |
| CGCTATCAAATCATGTTGTC+TGG | 0.427951 | 8_2:-18223965 | Msa1238230:CDS |
| CTCTTTATTAGGTTAGATCA+TGG | 0.428251 | 8_2:-18220850 | Msa1238230:intron |
| GTTTACATTGGGTGTGGAGC+AGG | 0.435075 | 8_2:-18224091 | Msa1238230:CDS |
| TCCAGAAGTTTATCTGGAAC+TGG | 0.441213 | 8_2:+18221295 | None:intergenic |
| CAACATGATTTGATAGCGTT+CGG | 0.442358 | 8_2:+18223970 | None:intergenic |
| GAAGGGTATCAGCACCTACT+TGG | 0.447511 | 8_2:-18222449 | Msa1238230:intron |
| ACAATCTAACTTACTACATC+AGG | 0.448215 | 8_2:+18221483 | None:intergenic |
| TATACGTAGGTTTATGAACT+AGG | 0.449883 | 8_2:-18222047 | Msa1238230:intron |
| TCATAATTGTTTGATAAAGC+TGG | 0.451330 | 8_2:-18224233 | Msa1238230:intron |
| ACAAATTATCACATCTCAAT+GGG | 0.452146 | 8_2:-18219018 | Msa1238230:CDS |
| TACGCTCCGCCAGGCATTCA+AGG | 0.452405 | 8_2:+18223999 | None:intergenic |
| GTGATAAATCCAGTAGTTGC+TGG | 0.453290 | 8_2:+18221640 | None:intergenic |
| AACAAATTATCACATCTCAA+TGG | 0.453645 | 8_2:-18219019 | Msa1238230:CDS |
| GATCAAGTACTTTATTTGAC+TGG | 0.455265 | 8_2:+18219264 | None:intergenic |
| GGGTGCTCAACAAAAGGTCT+TGG | 0.456993 | 8_2:-18223238 | Msa1238230:CDS |
| TCCTCTGGGTGCTCAACAAA+AGG | 0.457650 | 8_2:-18223244 | Msa1238230:CDS |
| GTGGCAAAGGCTGAAGGTAG+TGG | 0.462927 | 8_2:-18221579 | Msa1238230:CDS |
| CACCACCATCTAAGACATTC+CGG | 0.463376 | 8_2:+18218853 | None:intergenic |
| TCCAGATAAACTTCTGGAGT+TGG | 0.464896 | 8_2:-18221290 | Msa1238230:CDS |
| AATCGTTGAATATTGTTGTC+CGG | 0.466157 | 8_2:-18218872 | Msa1238230:CDS |
| GGACAACAATATTCAACGAT+TGG | 0.467117 | 8_2:+18218874 | None:intergenic |
| GGGTGTGGAGCAGGATTTGG+TGG | 0.469438 | 8_2:-18224082 | Msa1238230:CDS |
| GAATGTTTCTTACAGGATTG+TGG | 0.470481 | 8_2:-18221089 | Msa1238230:intron |
| ACTTGCATAATTACCAATAT+GGG | 0.471757 | 8_2:-18223444 | Msa1238230:CDS |
| TTGGAAATAGCTACCACACT+AGG | 0.472959 | 8_2:-18223219 | Msa1238230:CDS |
| ACATAGCAGAGCTGGAGATA+AGG | 0.473401 | 8_2:-18219099 | Msa1238230:CDS |
| TTATCTGGTCCTTGAATGCC+TGG | 0.476560 | 8_2:-18224008 | Msa1238230:CDS |
| AAGCTAAGGTAGGTCCCATC+AGG | 0.480178 | 8_2:-18225316 | Msa1238230:five_prime_UTR |
| ATTTGGTGGTGATAGGCCTT+CGG | 0.485745 | 8_2:-18224068 | Msa1238230:CDS |
| GATAAGTGAAAATGATAAAG+TGG | 0.487061 | 8_2:-18218919 | Msa1238230:CDS |
| CGAAGGGATAAGGTTTACAT+TGG | 0.487237 | 8_2:-18224103 | Msa1238230:CDS |
| AAGTTGTAGAGTTCTCTGTT+CGG | 0.487844 | 8_2:-18221338 | Msa1238230:CDS |
| AAGGAGGCAACACAACTTGT+TGG | 0.490879 | 8_2:+18218772 | None:intergenic |
| TCCTCAGAATTTGTTTCACC+TGG | 0.491136 | 8_2:-18219176 | Msa1238230:CDS |
| CGTAGGTTTATGAACTAGGT+TGG | 0.493111 | 8_2:-18222043 | Msa1238230:intron |
| ATCAGGAGTCACATAAGCAC+TGG | 0.495783 | 8_2:+18221500 | None:intergenic |
| AATGGACCCGCCGGTGGTGG+CGG | 0.496512 | 8_2:-18220629 | Msa1238230:CDS |
| AGTTGCATACCTGCTCCATC+AGG | 0.496829 | 8_2:-18219149 | Msa1238230:CDS |
| TTAAAACATTGCTATAATCA+AGG | 0.500429 | 8_2:+18218753 | None:intergenic |
| GTTGTCCGGAATGTCTTAGA+TGG | 0.501841 | 8_2:-18218858 | Msa1238230:CDS |
| GAATGTGGTTGCCAACTCAC+AGG | 0.502566 | 8_2:-18221966 | Msa1238230:CDS |
| TTGCATCTAAATCAAGAGAA+GGG | 0.503548 | 8_2:+18218961 | None:intergenic |
| CTCAAAGCTGCTAGCAGCAA+CGG | 0.505730 | 8_2:-18220764 | Msa1238230:CDS |
| GAGCAGGATTTGGTGGTGAT+AGG | 0.513221 | 8_2:-18224075 | Msa1238230:CDS |
| GGCAACCACATTCTAGAAGA+TGG | 0.513261 | 8_2:+18221976 | None:intergenic |
| ACAAATGGACCCGCCGGTGG+TGG | 0.518144 | 8_2:-18220632 | Msa1238230:CDS |
| TGGCAAAGGCTGAAGGTAGT+GGG | 0.520752 | 8_2:-18221578 | Msa1238230:CDS |
| AATGTAGCACATAGCAGAGC+TGG | 0.522286 | 8_2:-18219107 | Msa1238230:CDS |
| AGCGGAATCTTCTGACCTGA+TGG | 0.524725 | 8_2:+18219134 | None:intergenic |
| TTCTGTCGCTGTTGCTCATG+AGG | 0.527333 | 8_2:-18223187 | Msa1238230:intron |
| TTACAGGATTGTGGATGGAA+AGG | 0.528749 | 8_2:-18221080 | Msa1238230:intron |
| CTTGCATCTAAATCAAGAGA+AGG | 0.529568 | 8_2:+18218960 | None:intergenic |
| CGGCTAGAGTACGCTCCGCC+AGG | 0.531034 | 8_2:+18223990 | None:intergenic |
| CATCGCATTAACTTCCATTG+AGG | 0.531661 | 8_2:+18224279 | None:intergenic |
| GATAAGGTTTACATTGGGTG+TGG | 0.532957 | 8_2:-18224097 | Msa1238230:CDS |
| TGACCTGATACCGCCACCAC+CGG | 0.533151 | 8_2:+18220619 | None:intergenic |
| GTTTCTTACAGGATTGTGGA+TGG | 0.535245 | 8_2:-18221085 | Msa1238230:intron |
| GAAGGGATAAGGTTTACATT+GGG | 0.537365 | 8_2:-18224102 | Msa1238230:CDS |
| TATTGCATGGAAATTGGTAT+CGG | 0.537755 | 8_2:+18225371 | None:intergenic |
| TTATTAGGTTAGATCATGGA+TGG | 0.538532 | 8_2:-18220846 | Msa1238230:intron |
| TGCAGAGAAGTAATCCCAAA+AGG | 0.539483 | 8_2:-18224126 | Msa1238230:intron |
| ATCTTCTGACCTGATGGAGC+AGG | 0.540709 | 8_2:+18219140 | None:intergenic |
| CTAGCTCAAGGATCTTTGGC+TGG | 0.543862 | 8_2:-18221999 | Msa1238230:CDS |
| TGACTAGGGGATAAAAGCTA+AGG | 0.544590 | 8_2:-18225330 | Msa1238230:five_prime_UTR |
| ATGGACGGAAGGACACATCC+TGG | 0.544813 | 8_2:+18221365 | None:intergenic |
| GGTAGGTCCCATCAGGATCA+AGG | 0.547118 | 8_2:-18225309 | Msa1238230:intron |
| CTGAAATGGTCTTTCCATGC+CGG | 0.549821 | 8_2:+18218808 | None:intergenic |
| ACTTCTGGAGTTGGTTCCAA+AGG | 0.553536 | 8_2:-18221281 | Msa1238230:intron |
| GCTGGCCATCTTCTAGAATG+TGG | 0.555277 | 8_2:-18221981 | Msa1238230:CDS |
| GATATTAGGTTACGCATGGA+TGG | 0.556565 | 8_2:-18220713 | Msa1238230:CDS |
| TCGATATCAGGAGGAAAATG+TGG | 0.558482 | 8_2:+18219050 | None:intergenic |
| ATCATGTTGTCTGGTGGTGA+TGG | 0.558840 | 8_2:-18223956 | Msa1238230:CDS |
| CTCTACAACTTGATAATGGA+CGG | 0.559554 | 8_2:+18221350 | None:intergenic |
| TATGCTGAAATCAGTTTCGA+TGG | 0.563001 | 8_2:-18221612 | Msa1238230:CDS |
| GCAGGTATGCAACTTCTACC+AGG | 0.563751 | 8_2:+18219158 | None:intergenic |
| ACAATTACTCTATGAAATTG+GGG | 0.564192 | 8_2:-18221526 | Msa1238230:CDS |
| CCTGATACCGCCACCACCGG+CGG | 0.566247 | 8_2:+18220622 | None:intergenic |
| GAAGTAATCCCAAAAGGCGA+AGG | 0.572871 | 8_2:-18224120 | Msa1238230:CDS |
| ATGTAATTATCACATTTGGT+TGG | 0.577744 | 8_2:+18222392 | None:intergenic |
| CTGATACCGCCACCACCGGC+GGG | 0.578573 | 8_2:+18220623 | None:intergenic |
| TTTCTAAAAGTGGATCCTCT+GGG | 0.578847 | 8_2:-18223258 | Msa1238230:intron |
| TGGACAAGTGTGTGTGGCAA+AGG | 0.578883 | 8_2:-18221592 | Msa1238230:CDS |
| GATTGTGGATGGAAAGGATG+GGG | 0.580255 | 8_2:-18221074 | Msa1238230:CDS |
| TCTGGCGAATCGGGTTGAAG+AGG | 0.582955 | 8_2:-18219298 | Msa1238230:CDS |
| TGAAGATATTAGGTTACGCA+TGG | 0.583995 | 8_2:-18220717 | Msa1238230:CDS |
| CCTATATACTTTATTCAGAG+TGG | 0.586610 | 8_2:-18218643 | Msa1238230:three_prime_UTR |
| AAGGGTATCAGCACCTACTT+GGG | 0.587825 | 8_2:-18222448 | Msa1238230:CDS |
| CTATATACTTTATTCAGAGT+GGG | 0.587996 | 8_2:-18218642 | Msa1238230:three_prime_UTR |
| CGATATCAGGAGGAAAATGT+GGG | 0.592608 | 8_2:+18219051 | None:intergenic |
| GAGTTAGAGCATCTAGCTCA+AGG | 0.593140 | 8_2:-18222011 | Msa1238230:CDS |
| AATGTGGTTGCCAACTCACA+GGG | 0.594079 | 8_2:-18221965 | Msa1238230:CDS |
| AAATTCTCTAGTAAATTGTA+CGG | 0.599108 | 8_2:+18220667 | None:intergenic |
| GGTGAGTACCTTGATCCTGA+TGG | 0.599114 | 8_2:+18225301 | None:intergenic |
| TCGCGAAGAATTGACCGGCA+TGG | 0.600821 | 8_2:-18218822 | Msa1238230:CDS |
| TGCATCTAAATCAAGAGAAG+GGG | 0.603094 | 8_2:+18218962 | None:intergenic |
| GGCAAAGGCTGAAGGTAGTG+GGG | 0.604566 | 8_2:-18221577 | Msa1238230:CDS |
| TGGAAATAGCTACCACACTA+GGG | 0.605065 | 8_2:-18223218 | Msa1238230:CDS |
| TCAGGAGTCACATAAGCACT+GGG | 0.606732 | 8_2:+18221501 | None:intergenic |
| TCGAAACTGATTTCAGCATA+CGG | 0.607386 | 8_2:+18221615 | None:intergenic |
| ACAACTTGATAATGGACGGA+AGG | 0.613102 | 8_2:+18221354 | None:intergenic |
| GTTCCTCTTTCCAAAGCCAA+AGG | 0.613102 | 8_2:+18223465 | None:intergenic |
| AGTATATGGTCGTTAAAACC+AGG | 0.614295 | 8_2:+18220812 | None:intergenic |
| ATGAGTTTAAGCTTGTGCTA+TGG | 0.615344 | 8_2:-18218731 | Msa1238230:three_prime_UTR |
| CTCAATGGAAGTTAATGCGA+TGG | 0.616174 | 8_2:-18224278 | Msa1238230:exon |
| GTGAGTACCTTGATCCTGAT+GGG | 0.617327 | 8_2:+18225302 | None:intergenic |
| TAAATCCAGTAGTTGCTGGA+AGG | 0.623190 | 8_2:+18221644 | None:intergenic |
| ACCAGGTGAAACAAATTCTG+AGG | 0.623587 | 8_2:+18219175 | None:intergenic |
| TTATGAACTAGGTTGGAACT+GGG | 0.623764 | 8_2:-18222036 | Msa1238230:CDS |
| TTCAACCTCTCGATATCAGG+AGG | 0.628011 | 8_2:+18219041 | None:intergenic |
| ATCTCAATGGGTAAAATCAG+CGG | 0.631910 | 8_2:-18219006 | Msa1238230:CDS |
| ACTGTTCGCGAAGAATTGAC+CGG | 0.632669 | 8_2:-18218827 | Msa1238230:CDS |
| AAGTAATCCCAAAAGGCGAA+GGG | 0.634753 | 8_2:-18224119 | Msa1238230:CDS |
| TAGGGGATAAAAGCTAAGGT+AGG | 0.638025 | 8_2:-18225326 | Msa1238230:five_prime_UTR |
| GGATTGTGGATGGAAAGGAT+GGG | 0.638291 | 8_2:-18221075 | Msa1238230:CDS |
| AGAAACATCAAGCCCTAGTG+TGG | 0.638755 | 8_2:+18223206 | None:intergenic |
| TTGTATACAAATGGACCCGC+CGG | 0.638821 | 8_2:-18220638 | Msa1238230:CDS |
| CTATGTGCTACATTGTAAAG+CGG | 0.638874 | 8_2:+18219116 | None:intergenic |
| ATATCTTCAGTATTCGTCTG+TGG | 0.641874 | 8_2:+18220731 | None:intergenic |
| AATAGGAGAAGCTCCCAAGT+AGG | 0.643463 | 8_2:+18222435 | None:intergenic |
| TATACAAATGGACCCGCCGG+TGG | 0.645442 | 8_2:-18220635 | Msa1238230:CDS |
| AGGTGAAACAAATTCTGAGG+AGG | 0.647632 | 8_2:+18219178 | None:intergenic |
| GTTGCTGGAAGGACATATCT+CGG | 0.649291 | 8_2:+18221655 | None:intergenic |
| GTGTGTGTGGCAAAGGCTGA+AGG | 0.651349 | 8_2:-18221585 | Msa1238230:CDS |
| GAAGGGGACAAATCCAGAAG+AGG | 0.652630 | 8_2:+18218978 | None:intergenic |
| TATGAATCTCTTCTCCATCG+TGG | 0.657210 | 8_2:+18224251 | None:intergenic |
| GCAAAGGCTGAAGGTAGTGG+GGG | 0.669870 | 8_2:-18221576 | Msa1238230:CDS |
| AGCAACTTAAGAGCAGCCGA+AGG | 0.674638 | 8_2:+18224052 | None:intergenic |
| AAACATTGCTATAATCAAGG+AGG | 0.679654 | 8_2:+18218756 | None:intergenic |
| TGTGGTTGCCAACTCACAGG+GGG | 0.684562 | 8_2:-18221963 | Msa1238230:CDS |
| TTTCGATGGACAAGTGTGTG+TGG | 0.684974 | 8_2:-18221598 | Msa1238230:CDS |
| GTCCGGAATGTCTTAGATGG+TGG | 0.685418 | 8_2:-18218855 | Msa1238230:CDS |
| TGGGGAGAGATATCTTATGG+AGG | 0.712179 | 8_2:-18221056 | Msa1238230:CDS |
| TCTGGTCCTTGAATGCCTGG+CGG | 0.716274 | 8_2:-18224005 | Msa1238230:CDS |
| TATCAAATCATGTTGTCTGG+TGG | 0.719901 | 8_2:-18223962 | Msa1238230:CDS |
| TTAGATAATAAAGAACACAA+CGG | 0.723123 | 8_2:+18218611 | None:intergenic |
| AATGCGATGGAAGTCCACGA+TGG | 0.724445 | 8_2:-18224265 | Msa1238230:CDS |
| ATGTGGTTGCCAACTCACAG+GGG | 0.728061 | 8_2:-18221964 | Msa1238230:CDS |
| CAGGAGTCACATAAGCACTG+GGG | 0.815778 | 8_2:+18221502 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAGATTATAAATTATA+TGG | - | chr8_2:18219541-18219560 | Msa1238230:intron | 10.0% |
| !!! | TTTTTCCTTTTAAATTTAAT+AGG | - | chr8_2:18220190-18220209 | Msa1238230:intron | 10.0% |
| !! | ATATACTTTCTTATATAATT+GGG | - | chr8_2:18223285-18223304 | Msa1238230:intron | 10.0% |
| !!! | TTTTAATTAATTGGTTTAAA+AGG | + | chr8_2:18223879-18223898 | None:intergenic | 10.0% |
| !!! | CTTTTGTTATTTTAATTAAT+TGG | + | chr8_2:18223888-18223907 | None:intergenic | 10.0% |
| !! | GACAAATATTTATATGAAAA+TGG | - | chr8_2:18218654-18218673 | Msa1238230:three_prime_UTR | 15.0% |
| !!! | TAATTTTTAGTTTTGATCAA+CGG | - | chr8_2:18218971-18218990 | Msa1238230:CDS | 15.0% |
| !!! | TCAATTATTATTTCTATCAA+AGG | - | chr8_2:18219044-18219063 | Msa1238230:CDS | 15.0% |
| !! | GAAAACCTATTAAATTTAAA+AGG | + | chr8_2:18220198-18220217 | None:intergenic | 15.0% |
| !! | AAAAATTACCAAAAAGAAAA+AGG | + | chr8_2:18221165-18221184 | None:intergenic | 15.0% |
| !! | TATTATGTTTAATAGTATTG+TGG | + | chr8_2:18221901-18221920 | None:intergenic | 15.0% |
| !! | TATTATTCATTCTCTTTATT+AGG | - | chr8_2:18223220-18223239 | Msa1238230:CDS | 15.0% |
| !!! | CAATTATATAAGAAAGTATA+TGG | + | chr8_2:18223286-18223305 | None:intergenic | 15.0% |
| !! | CATATACTTTCTTATATAAT+TGG | - | chr8_2:18223284-18223303 | Msa1238230:intron | 15.0% |
| !!! | AAATTGTTTTACTGAAAATT+TGG | + | chr8_2:18224306-18224325 | None:intergenic | 15.0% |
| !! | ATGTACCATTAAAATATATT+TGG | + | chr8_2:18224333-18224352 | None:intergenic | 15.0% |
| !!! | AAGTTTTTTTTTTCTTCCAA+AGG | + | chr8_2:18218598-18218617 | None:intergenic | 20.0% |
| !!! | TAAAACTTAAACTGTTGTTT+TGG | + | chr8_2:18218629-18218648 | None:intergenic | 20.0% |
| !! | ACTGCAAAAATAATCAAAAT+TGG | + | chr8_2:18219004-18219023 | None:intergenic | 20.0% |
| !!! | TAGAAATAATAATTGACTCA+TGG | + | chr8_2:18219040-18219059 | None:intergenic | 20.0% |
| !!! | TCTTTAATTTCTGAAAATAC+TGG | + | chr8_2:18219137-18219156 | None:intergenic | 20.0% |
| !! | AATTAAAGAGAAACCAAAAT+AGG | - | chr8_2:18219148-18219167 | Msa1238230:CDS | 20.0% |
| !! | CGCAAATAAGATTAATTTAA+CGG | + | chr8_2:18219243-18219262 | None:intergenic | 20.0% |
| !!! | TAAATTAATCTTATTTGCGT+CGG | - | chr8_2:18219244-18219263 | Msa1238230:CDS | 20.0% |
| !! | ATAAATGAAAAGCAAAACAA+AGG | + | chr8_2:18219703-18219722 | None:intergenic | 20.0% |
| !! | TAAAAAGACAACAAAAGATA+GGG | + | chr8_2:18219887-18219906 | None:intergenic | 20.0% |
| !! | TTAAAAAGACAACAAAAGAT+AGG | + | chr8_2:18219888-18219907 | None:intergenic | 20.0% |
| !!! | TTTAAATTTGTTGGACTATA+TGG | - | chr8_2:18220762-18220781 | Msa1238230:CDS | 20.0% |
| !! | TCAATGAAAGAAAATAGAAT+TGG | - | chr8_2:18221280-18221299 | Msa1238230:intron | 20.0% |
| !! | AATCAAGTTAATTGATGTTA+TGG | - | chr8_2:18221480-18221499 | Msa1238230:intron | 20.0% |
| !! | GGATAAAATTCTGAATTATT+AGG | - | chr8_2:18222007-18222026 | Msa1238230:CDS | 20.0% |
| !! | AACAATTACTCTATGAAATT+GGG | - | chr8_2:18222554-18222573 | Msa1238230:intron | 20.0% |
| !! | CTTAAAAAGAAATACAATGT+AGG | + | chr8_2:18222934-18222953 | None:intergenic | 20.0% |
| !! | AAATTCTCTAGTAAATTGTA+CGG | + | chr8_2:18223417-18223436 | None:intergenic | 20.0% |
| !! | TTCAGTCAACAAAAAAAAAA+CGG | - | chr8_2:18223981-18224000 | Msa1238230:CDS | 20.0% |
| !! | TATGAATGTTGTAATATTTG+AGG | - | chr8_2:18224078-18224097 | Msa1238230:CDS | 20.0% |
| !!! | TAGAGCCAAATATATTTTAA+TGG | - | chr8_2:18224325-18224344 | Msa1238230:intron | 20.0% |
| !!! | TATTTTAATGGTACATTACT+TGG | - | chr8_2:18224337-18224356 | Msa1238230:intron | 20.0% |
| !! | TTAAAACATTGCTATAATCA+AGG | + | chr8_2:18225331-18225350 | None:intergenic | 20.0% |
| !! | TTAGATAATAAAGAACACAA+CGG | + | chr8_2:18225473-18225492 | None:intergenic | 20.0% |
| ! | AAACTAACAGAATCATAATG+AGG | + | chr8_2:18218810-18218829 | None:intergenic | 25.0% |
| ! | ATATGATAATAGTTAGAGTG+AGG | + | chr8_2:18218942-18218961 | None:intergenic | 25.0% |
| ! | TCACTCTAACTATTATCATA+TGG | - | chr8_2:18218941-18218960 | Msa1238230:CDS | 25.0% |
| !! | CAGTTTTACAAATCCTATTT+TGG | + | chr8_2:18219164-18219183 | None:intergenic | 25.0% |
| !!! | TTTCTTTTAGGTGATGTTTT+AGG | - | chr8_2:18219648-18219667 | Msa1238230:intron | 25.0% |
| !!! | TTCTTTTAGGTGATGTTTTA+GGG | - | chr8_2:18219649-18219668 | Msa1238230:intron | 25.0% |
| !! | CCAAATATCTCTAAAAAAAC+TGG | + | chr8_2:18219726-18219745 | None:intergenic | 25.0% |
| !!! | CCAGTTTTTTTAGAGATATT+TGG | - | chr8_2:18219723-18219742 | Msa1238230:intron | 25.0% |
| ! | TCATAATTGTTTGATAAAGC+TGG | - | chr8_2:18219848-18219867 | Msa1238230:intron | 25.0% |
| ! | CAATGTAATATCAACATAGT+TGG | + | chr8_2:18219937-18219956 | None:intergenic | 25.0% |
| ! | AGTCAAAGAACTAAATTATC+TGG | - | chr8_2:18220058-18220077 | Msa1238230:intron | 25.0% |
| ! | TGTTATTGTGTTTAAGCATT+TGG | + | chr8_2:18220249-18220268 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTATCGTATACT+CGG | - | chr8_2:18220473-18220492 | Msa1238230:intron | 25.0% |
| ! | AACTTGCATAATTACCAATA+TGG | - | chr8_2:18220636-18220655 | Msa1238230:CDS | 25.0% |
| ! | ACTTGCATAATTACCAATAT+GGG | - | chr8_2:18220637-18220656 | Msa1238230:CDS | 25.0% |
| !! | ATTTTTAATGCTGCATTTGA+TGG | - | chr8_2:18220671-18220690 | Msa1238230:CDS | 25.0% |
| !! | TGAGTTTGGTTTAAATTTGT+TGG | - | chr8_2:18220753-18220772 | Msa1238230:CDS | 25.0% |
| ! | AAAGTGAAAACAAATTTCAG+AGG | + | chr8_2:18221130-18221149 | None:intergenic | 25.0% |
| !!! | TTTTACTGTTTTTAGCTCTT+TGG | - | chr8_2:18221181-18221200 | Msa1238230:intron | 25.0% |
| ! | TAAATTGCTAATGTGTACTT+TGG | - | chr8_2:18221217-18221236 | Msa1238230:intron | 25.0% |
| !! | TAAATATATGATAACGTGAC+AGG | + | chr8_2:18221256-18221275 | None:intergenic | 25.0% |
| ! | ACCTACACAAAAATATATCA+TGG | - | chr8_2:18221379-18221398 | Msa1238230:CDS | 25.0% |
| !!! | TCCATGATATATTTTTGTGT+AGG | + | chr8_2:18221383-18221402 | None:intergenic | 25.0% |
| ! | TACACAAAAATATATCATGG+AGG | - | chr8_2:18221382-18221401 | Msa1238230:intron | 25.0% |
| ! | ACACAAAAATATATCATGGA+GGG | - | chr8_2:18221383-18221402 | Msa1238230:intron | 25.0% |
| ! | TTATTGACAGATAAACAAAG+AGG | + | chr8_2:18221517-18221536 | None:intergenic | 25.0% |
| !!! | ACTTTACTTTTTTGTTAAGC+TGG | - | chr8_2:18221585-18221604 | Msa1238230:CDS | 25.0% |
| ! | ATGTAATTATCACATTTGGT+TGG | + | chr8_2:18221692-18221711 | None:intergenic | 25.0% |
| ! | CTTGATGTAATTATCACATT+TGG | + | chr8_2:18221696-18221715 | None:intergenic | 25.0% |
| ! | ATAACTTAAGACATATTCTG+TGG | - | chr8_2:18221855-18221874 | Msa1238230:intron | 25.0% |
| ! | AAAACTACTAAGCGAAATAT+AGG | - | chr8_2:18221932-18221951 | Msa1238230:intron | 25.0% |
| !!! | ATTATTAGGTTGATATACGT+AGG | - | chr8_2:18222021-18222040 | Msa1238230:CDS | 25.0% |
| !! | ACACTATCAATTTGAAGTTT+CGG | - | chr8_2:18222322-18222341 | Msa1238230:intron | 25.0% |
| ! | GAACAATTACTCTATGAAAT+TGG | - | chr8_2:18222553-18222572 | Msa1238230:intron | 25.0% |
| ! | ACAATTACTCTATGAAATTG+GGG | - | chr8_2:18222555-18222574 | Msa1238230:intron | 25.0% |
| ! | ATCGATGATTTATGACTAAA+GGG | - | chr8_2:18222640-18222659 | Msa1238230:intron | 25.0% |
| ! | CAATGTAGGAAAAATACAAA+AGG | + | chr8_2:18222920-18222939 | None:intergenic | 25.0% |
| ! | AATATTAATTCGTAGTAAGC+TGG | + | chr8_2:18223199-18223218 | None:intergenic | 25.0% |
| ! | GTAGCAATACTAAATTTAGA+GGG | + | chr8_2:18223492-18223511 | None:intergenic | 25.0% |
| ! | AGTAGCAATACTAAATTTAG+AGG | + | chr8_2:18223493-18223512 | None:intergenic | 25.0% |
| !! | CTGTTTGCTTGAAATTTTAT+TGG | - | chr8_2:18223511-18223530 | Msa1238230:intron | 25.0% |
| !!! | CTTAGGAGAAATTTTTTGTA+TGG | + | chr8_2:18223665-18223684 | None:intergenic | 25.0% |
| ! | CAAAAAATTTCTCCTAAGTT+TGG | - | chr8_2:18223667-18223686 | Msa1238230:intron | 25.0% |
| !!! | ATCACATGGTCTTTTTTAAA+TGG | - | chr8_2:18223778-18223797 | Msa1238230:intron | 25.0% |
| !! | GATTCTTCTAGAAAAACATT+TGG | - | chr8_2:18224171-18224190 | Msa1238230:intron | 25.0% |
| ! | AGTCATTCTTATAATGTTGA+TGG | + | chr8_2:18224374-18224393 | None:intergenic | 25.0% |
| ! | ACATTATAAGAATGACTACT+TGG | - | chr8_2:18224377-18224396 | Msa1238230:intron | 25.0% |
| ! | TAAACAATCAATGAAACATG+TGG | - | chr8_2:18224640-18224659 | Msa1238230:intron | 25.0% |
| ! | AACAAATTATCACATCTCAA+TGG | - | chr8_2:18225062-18225081 | Msa1238230:intron | 25.0% |
| ! | ACAAATTATCACATCTCAAT+GGG | - | chr8_2:18225063-18225082 | Msa1238230:intron | 25.0% |
| ! | CAAGAAATCAAAGAGATAAA+TGG | - | chr8_2:18225140-18225159 | Msa1238230:intron | 25.0% |
| ! | GATAAGTGAAAATGATAAAG+TGG | - | chr8_2:18225162-18225181 | Msa1238230:intron | 25.0% |
| !!! | AATGAAAAAGCATTGAAGTT+TGG | - | chr8_2:18225392-18225411 | Msa1238230:five_prime_UTR | 25.0% |
| ! | CTATATACTTTATTCAGAGT+GGG | - | chr8_2:18225439-18225458 | Msa1238230:five_prime_UTR | 25.0% |
| !!! | ACTTAAACTGTTGTTTTGGA+AGG | + | chr8_2:18218625-18218644 | None:intergenic | 30.0% |
| TATTGCATGGAAATTGGTAT+CGG | + | chr8_2:18218713-18218732 | None:intergenic | 30.0% | |
| TTGTTCTATTGCATGGAAAT+TGG | + | chr8_2:18218719-18218738 | None:intergenic | 30.0% | |
| !! | AACTACACAACTTTTGACTA+GGG | - | chr8_2:18218737-18218756 | Msa1238230:three_prime_UTR | 30.0% |
| ACAGAATCATAATGAGGTTA+TGG | + | chr8_2:18218804-18218823 | None:intergenic | 30.0% | |
| TGAGGTGAAAATAGCAAATT+GGG | + | chr8_2:18218924-18218943 | None:intergenic | 30.0% | |
| ! | GTGTGTGTGTCAATTTTATT+TGG | - | chr8_2:18219096-18219115 | Msa1238230:CDS | 30.0% |
| !! | TCATATAAGTTGATCCAAAC+AGG | + | chr8_2:18219401-18219420 | None:intergenic | 30.0% |
| GAAGAGCTTATATGGAAATA+AGG | + | chr8_2:18219508-18219527 | None:intergenic | 30.0% | |
| ! | GCTACGAAAATGTTTCTTTT+AGG | - | chr8_2:18219636-18219655 | Msa1238230:intron | 30.0% |
| AGTTATTCATCAAAGGGATT+AGG | + | chr8_2:18219676-18219695 | None:intergenic | 30.0% | |
| TTGTGTTTAAGCATTTGGAA+AGG | + | chr8_2:18220244-18220263 | None:intergenic | 30.0% | |
| ! | AGCACTGAATAAAATTCATC+TGG | + | chr8_2:18220275-18220294 | None:intergenic | 30.0% |
| TATTCAGTGCTATCAATTAG+TGG | - | chr8_2:18220284-18220303 | Msa1238230:intron | 30.0% | |
| !!! | TTTTATATGCAGTTTCTAGC+TGG | - | chr8_2:18220578-18220597 | Msa1238230:intron | 30.0% |
| ! | GACTCTTTTTGTAATGAGTT+TGG | - | chr8_2:18220739-18220758 | Msa1238230:CDS | 30.0% |
| ! | TCATTCTTCGTTTCTAAAAG+TGG | - | chr8_2:18220813-18220832 | Msa1238230:CDS | 30.0% |
| !!! | ACACATTGCTTTTTAACCAA+AGG | + | chr8_2:18220963-18220982 | None:intergenic | 30.0% |
| ! | ACCTTACAAGATGATTTTCT+CGG | - | chr8_2:18221045-18221064 | Msa1238230:CDS | 30.0% |
| ! | GTTTTCACTTTCTGTTACAA+TGG | - | chr8_2:18221139-18221158 | Msa1238230:intron | 30.0% |
| ! | TACAATGGCCTTTTTCTTTT+TGG | - | chr8_2:18221154-18221173 | Msa1238230:intron | 30.0% |
| ACAAATAGTAGAACTTAGCA+TGG | + | chr8_2:18221324-18221343 | None:intergenic | 30.0% | |
| !!! | ATATACATTTGCTGCTTTTC+AGG | - | chr8_2:18221344-18221363 | Msa1238230:CDS | 30.0% |
| ACAACTGAAGGAAAATTACT+AGG | + | chr8_2:18221430-18221449 | None:intergenic | 30.0% | |
| ! | TCCTTCAGTTGTCAAATTTT+AGG | - | chr8_2:18221438-18221457 | Msa1238230:intron | 30.0% |
| ! | CCTTCAGTTGTCAAATTTTA+GGG | - | chr8_2:18221439-18221458 | Msa1238230:intron | 30.0% |
| GTTAAGCTGGATATGAAATT+TGG | - | chr8_2:18221598-18221617 | Msa1238230:CDS | 30.0% | |
| !! | TTTTCAAGACAGTGAACAAT+AGG | + | chr8_2:18221666-18221685 | None:intergenic | 30.0% |
| CAGATTAGATATCATACCAT+AGG | + | chr8_2:18221747-18221766 | None:intergenic | 30.0% | |
| TTGAAAAGCAAGCAAAAGAT+GGG | + | chr8_2:18221787-18221806 | None:intergenic | 30.0% | |
| TATACGTAGGTTTATGAACT+AGG | - | chr8_2:18222034-18222053 | Msa1238230:CDS | 30.0% | |
| TTGAATTTAACCAGATGTGT+TGG | - | chr8_2:18222273-18222292 | Msa1238230:intron | 30.0% | |
| !!! | AGCTCTGTCTTGTTTATTTT+AGG | - | chr8_2:18222394-18222413 | Msa1238230:CDS | 30.0% |
| ACAATCTAACTTACTACATC+AGG | + | chr8_2:18222601-18222620 | None:intergenic | 30.0% | |
| AGTCATAAATCATCGATGTT+TGG | + | chr8_2:18222637-18222656 | None:intergenic | 30.0% | |
| CATCGATGATTTATGACTAA+AGG | - | chr8_2:18222639-18222658 | Msa1238230:intron | 30.0% | |
| AGAACTCTACAACTTGATAA+TGG | + | chr8_2:18222738-18222757 | None:intergenic | 30.0% | |
| GAGAATAAGAAATCTACCTT+TGG | + | chr8_2:18222819-18222838 | None:intergenic | 30.0% | |
| ATAATAACGAAGCATGAACA+TGG | + | chr8_2:18223125-18223144 | None:intergenic | 30.0% | |
| CTCTTTATTAGGTTAGATCA+TGG | - | chr8_2:18223231-18223250 | Msa1238230:CDS | 30.0% | |
| TTATTAGGTTAGATCATGGA+TGG | - | chr8_2:18223235-18223254 | Msa1238230:CDS | 30.0% | |
| AGACGAATACTGAAGATATT+AGG | - | chr8_2:18223354-18223373 | Msa1238230:intron | 30.0% | |
| TTTACAGCGTTGTATACAAA+TGG | - | chr8_2:18223434-18223453 | Msa1238230:intron | 30.0% | |
| CACAGATCAACTATAAAAAC+TGG | + | chr8_2:18223537-18223556 | None:intergenic | 30.0% | |
| ATAGTTGATCTGTGTTGAAT+TGG | - | chr8_2:18223543-18223562 | Msa1238230:intron | 30.0% | |
| !! | TCTAGGGTTAGATATGTTTT+TGG | - | chr8_2:18223607-18223626 | Msa1238230:intron | 30.0% |
| ! | TTGTATGGACGAAACTTTTA+CGG | + | chr8_2:18223650-18223669 | None:intergenic | 30.0% |
| TTATTTCACGCTTCAAGAAT+TGG | - | chr8_2:18223698-18223717 | Msa1238230:intron | 30.0% | |
| AGCACAAAAAAAACACAGTA+GGG | + | chr8_2:18223725-18223744 | None:intergenic | 30.0% | |
| GACTGAATAAACAAAAATCC+AGG | + | chr8_2:18223968-18223987 | None:intergenic | 30.0% | |
| ACATTCATATTAGCAATTGC+AGG | + | chr8_2:18224067-18224086 | None:intergenic | 30.0% | |
| CATATGCTCAAATGTAAGAA+AGG | + | chr8_2:18224225-18224244 | None:intergenic | 30.0% | |
| TTTGAGCATATGTATGCATT+AGG | - | chr8_2:18224233-18224252 | Msa1238230:intron | 30.0% | |
| TAGGACTATACTTTATCACT+TGG | - | chr8_2:18224252-18224271 | Msa1238230:CDS | 30.0% | |
| ACACAATGATTCATAGTGTT+TGG | - | chr8_2:18224401-18224420 | Msa1238230:intron | 30.0% | |
| ! | GATCAAGTACTTTATTTGAC+TGG | + | chr8_2:18224820-18224839 | None:intergenic | 30.0% |
| ! | AAATTCTGAGGAGGATTTAT+CGG | + | chr8_2:18224897-18224916 | None:intergenic | 30.0% |
| TTGCATCTAAATCAAGAGAA+GGG | + | chr8_2:18225123-18225142 | None:intergenic | 30.0% | |
| AATCGTTGAATATTGTTGTC+CGG | - | chr8_2:18225209-18225228 | Msa1238230:intron | 30.0% | |
| GCACAATATAAGATCTGAAA+TGG | + | chr8_2:18225290-18225309 | None:intergenic | 30.0% | |
| AAACATTGCTATAATCAAGG+AGG | + | chr8_2:18225328-18225347 | None:intergenic | 30.0% | |
| TTGTGCTATGGTGATTATTA+TGG | - | chr8_2:18225362-18225381 | Msa1238230:intron | 30.0% | |
| CCACTCTGAATAAAGTATAT+AGG | + | chr8_2:18225441-18225460 | None:intergenic | 30.0% | |
| CCTATATACTTTATTCAGAG+TGG | - | chr8_2:18225438-18225457 | Msa1238230:five_prime_UTR | 30.0% | |
| ! | TTTTCTTCCAAAGGCTTGAA+AGG | + | chr8_2:18218589-18218608 | None:intergenic | 35.0% |
| TGTGTAGTTGTTCTATTGCA+TGG | + | chr8_2:18218726-18218745 | None:intergenic | 35.0% | |
| !! | CAACTACACAACTTTTGACT+AGG | - | chr8_2:18218736-18218755 | Msa1238230:three_prime_UTR | 35.0% |
| !! | ACTACACAACTTTTGACTAG+GGG | - | chr8_2:18218738-18218757 | Msa1238230:three_prime_UTR | 35.0% |
| TGTATGTGATTCTGACCTTA+TGG | - | chr8_2:18218868-18218887 | Msa1238230:CDS | 35.0% | |
| AGATAACATCATCAGCCATA+AGG | + | chr8_2:18218886-18218905 | None:intergenic | 35.0% | |
| GAGGTGAAAATAGCAAATTG+GGG | + | chr8_2:18218923-18218942 | None:intergenic | 35.0% | |
| GTGAGGTGAAAATAGCAAAT+TGG | + | chr8_2:18218925-18218944 | None:intergenic | 35.0% | |
| ! | ATTTTTGCAGTCTTCTGTAG+TGG | - | chr8_2:18219013-18219032 | Msa1238230:CDS | 35.0% |
| ! | TTTTTGCAGTCTTCTGTAGT+GGG | - | chr8_2:18219014-18219033 | Msa1238230:CDS | 35.0% |
| GTAAAACTGTTTCCTAGATG+AGG | - | chr8_2:18219175-18219194 | Msa1238230:CDS | 35.0% | |
| TTTCCTAGATGAGGTCTTTA+AGG | - | chr8_2:18219184-18219203 | Msa1238230:CDS | 35.0% | |
| ATTCCTTAAAGACCTCATCT+AGG | + | chr8_2:18219190-18219209 | None:intergenic | 35.0% | |
| !! | GAATTGATTTGCATTCTCTC+CGG | - | chr8_2:18219206-18219225 | Msa1238230:CDS | 35.0% |
| TAAGATTAATTTAACGGCCG+TGG | + | chr8_2:18219237-18219256 | None:intergenic | 35.0% | |
| ATCTATTAATGCCCGATGTT+TGG | - | chr8_2:18219271-18219290 | Msa1238230:CDS | 35.0% | |
| GACACAATTGAACAAGAAGA+AGG | + | chr8_2:18219348-18219367 | None:intergenic | 35.0% | |
| TAAACACTCGTGAAACTGAA+TGG | - | chr8_2:18219436-18219455 | Msa1238230:intron | 35.0% | |
| AAACACTCGTGAAACTGAAT+GGG | - | chr8_2:18219437-18219456 | Msa1238230:intron | 35.0% | |
| AAACTGAATGGGAGAACTTA+TGG | - | chr8_2:18219448-18219467 | Msa1238230:intron | 35.0% | |
| ACAACTTATGACATGTCCAT+AGG | - | chr8_2:18219473-18219492 | Msa1238230:intron | 35.0% | |
| AATAAGGTGAAAACAGCCTA+TGG | + | chr8_2:18219492-18219511 | None:intergenic | 35.0% | |
| GCTATCTTGAAGAGCTTATA+TGG | + | chr8_2:18219516-18219535 | None:intergenic | 35.0% | |
| GGTGCAAGTTATTCATCAAA+GGG | + | chr8_2:18219682-18219701 | None:intergenic | 35.0% | |
| AGGTGCAAGTTATTCATCAA+AGG | + | chr8_2:18219683-18219702 | None:intergenic | 35.0% | |
| ! | AGAGATATTTGGACAGCTTT+TGG | - | chr8_2:18219734-18219753 | Msa1238230:intron | 35.0% |
| !!! | AGTTGGTTTTGTAACTGCAA+CGG | + | chr8_2:18219920-18219939 | None:intergenic | 35.0% |
| GAAGGGATAAGGTTTACATT+GGG | - | chr8_2:18219979-18219998 | Msa1238230:intron | 35.0% | |
| !! | CAACATGATTTGATAGCGTT+CGG | + | chr8_2:18220114-18220133 | None:intergenic | 35.0% |
| TATCAAATCATGTTGTCTGG+TGG | - | chr8_2:18220119-18220138 | Msa1238230:intron | 35.0% | |
| ATGGTTATGATTCTCAGAGT+AGG | - | chr8_2:18220144-18220163 | Msa1238230:intron | 35.0% | |
| ATTCTTACTAGCACCCATAT+TGG | + | chr8_2:18220653-18220672 | None:intergenic | 35.0% | |
| ! | TTTCTAAAAGTGGATCCTCT+GGG | - | chr8_2:18220823-18220842 | Msa1238230:CDS | 35.0% |
| ! | GAGGTGTCTGTTACAAATTT+AGG | - | chr8_2:18220913-18220932 | Msa1238230:intron | 35.0% |
| TTTCCTTGCAAACTTTCCTT+TGG | - | chr8_2:18220944-18220963 | Msa1238230:intron | 35.0% | |
| TAACCAAAGGAAAGTTTGCA+AGG | + | chr8_2:18220950-18220969 | None:intergenic | 35.0% | |
| GTCTCGCTTTATATGAGATA+TGG | - | chr8_2:18220988-18221007 | Msa1238230:intron | 35.0% | |
| GAAAATCATCTTGTAAGGTG+AGG | + | chr8_2:18221044-18221063 | None:intergenic | 35.0% | |
| TCCGAGAAAATCATCTTGTA+AGG | + | chr8_2:18221049-18221068 | None:intergenic | 35.0% | |
| !!! | ACTGTTTTTAGCTCTTTGGA+AGG | - | chr8_2:18221185-18221204 | Msa1238230:intron | 35.0% |
| CCCTAAAATTTGACAACTGA+AGG | + | chr8_2:18221442-18221461 | None:intergenic | 35.0% | |
| AATTTGGCTGTAATATGCGA+AGG | - | chr8_2:18221614-18221633 | Msa1238230:CDS | 35.0% | |
| ATTTGGCTGTAATATGCGAA+GGG | - | chr8_2:18221615-18221634 | Msa1238230:CDS | 35.0% | |
| ! | TGCTTTATTCTTAGCACCTA+TGG | - | chr8_2:18221728-18221747 | Msa1238230:intron | 35.0% |
| CTTGAAAAGCAAGCAAAAGA+TGG | + | chr8_2:18221788-18221807 | None:intergenic | 35.0% | |
| AACAAACATTGCAGCTCTTA+TGG | + | chr8_2:18221959-18221978 | None:intergenic | 35.0% | |
| !!! | TGTTTTAGTTCTCTGTAGCT+AGG | - | chr8_2:18221975-18221994 | Msa1238230:CDS | 35.0% |
| ! | TTTATGAACTAGGTTGGAAC+TGG | - | chr8_2:18222044-18222063 | Msa1238230:intron | 35.0% |
| ! | TTATGAACTAGGTTGGAACT+GGG | - | chr8_2:18222045-18222064 | Msa1238230:intron | 35.0% |
| ATATGCAATATTAGCAGACC+TGG | + | chr8_2:18222157-18222176 | None:intergenic | 35.0% | |
| TAAGTCATGTGTTGTGTGAA+TGG | - | chr8_2:18222359-18222378 | Msa1238230:CDS | 35.0% | |
| AAGTCATGTGTTGTGTGAAT+GGG | - | chr8_2:18222360-18222379 | Msa1238230:CDS | 35.0% | |
| ! | TCGAAACTGATTTCAGCATA+CGG | + | chr8_2:18222469-18222488 | None:intergenic | 35.0% |
| TATGCTGAAATCAGTTTCGA+TGG | - | chr8_2:18222469-18222488 | Msa1238230:intron | 35.0% | |
| CTCTTATCGTGTTCTATTAC+AGG | - | chr8_2:18222683-18222702 | Msa1238230:intron | 35.0% | |
| !! | CTCTACAACTTGATAATGGA+CGG | + | chr8_2:18222734-18222753 | None:intergenic | 35.0% |
| AAGTTGTAGAGTTCTCTGTT+CGG | - | chr8_2:18222743-18222762 | Msa1238230:intron | 35.0% | |
| ! | TTGCTCTGAATGTTTCTTAC+AGG | - | chr8_2:18222985-18223004 | Msa1238230:intron | 35.0% |
| GAATGTTTCTTACAGGATTG+TGG | - | chr8_2:18222992-18223011 | Msa1238230:intron | 35.0% | |
| TGGATGGAAGAAATATTTCC+TGG | - | chr8_2:18223251-18223270 | Msa1238230:CDS | 35.0% | |
| AGTATATGGTCGTTAAAACC+AGG | + | chr8_2:18223272-18223291 | None:intergenic | 35.0% | |
| ATATCTTCAGTATTCGTCTG+TGG | + | chr8_2:18223353-18223372 | None:intergenic | 35.0% | |
| TGAAGATATTAGGTTACGCA+TGG | - | chr8_2:18223364-18223383 | Msa1238230:intron | 35.0% | |
| AATTGTCAACCACATACTCT+AGG | - | chr8_2:18223590-18223609 | Msa1238230:intron | 35.0% | |
| ATTGTCAACCACATACTCTA+GGG | - | chr8_2:18223591-18223610 | Msa1238230:intron | 35.0% | |
| ATATCTAACCCTAGAGTATG+TGG | + | chr8_2:18223602-18223621 | None:intergenic | 35.0% | |
| ATAAGTGGAGAACCAAACTT+AGG | + | chr8_2:18223682-18223701 | None:intergenic | 35.0% | |
| TTCTTGAAGCGTGAAATAAG+TGG | + | chr8_2:18223697-18223716 | None:intergenic | 35.0% | |
| CAGCACAAAAAAAACACAGT+AGG | + | chr8_2:18223726-18223745 | None:intergenic | 35.0% | |
| !! | ATGTGATCAAGCATTGACAT+GGG | + | chr8_2:18223765-18223784 | None:intergenic | 35.0% |
| GTCAACAAAAAAAAAACGGC+AGG | - | chr8_2:18223985-18224004 | Msa1238230:CDS | 35.0% | |
| TTATGTCACATTTCGTGAAC+TGG | + | chr8_2:18224013-18224032 | None:intergenic | 35.0% | |
| TGAATTATCAGATTCTGCAC+TGG | - | chr8_2:18224034-18224053 | Msa1238230:CDS | 35.0% | |
| GAATTATCAGATTCTGCACT+GGG | - | chr8_2:18224035-18224054 | Msa1238230:CDS | 35.0% | |
| !! | TTCTGTTTTGAATGCAGTAC+TGG | - | chr8_2:18224136-18224155 | Msa1238230:intron | 35.0% |
| AATGTAAGAAAGGCCAATAG+AGG | + | chr8_2:18224215-18224234 | None:intergenic | 35.0% | |
| GAAAATTTGGAAGAGCTCAA+TGG | + | chr8_2:18224293-18224312 | None:intergenic | 35.0% | |
| ! | ATTCCTTCAATCTGAAGTGT+AGG | + | chr8_2:18224452-18224471 | None:intergenic | 35.0% |
| ATTATTACCAATGTCGTGTC+TGG | - | chr8_2:18224549-18224568 | Msa1238230:intron | 35.0% | |
| TGTACTAGTGATCTTACTGT+TGG | - | chr8_2:18224694-18224713 | Msa1238230:intron | 35.0% | |
| CTATGATGAGTCTAAAAGCA+TGG | + | chr8_2:18224728-18224747 | None:intergenic | 35.0% | |
| ! | CTTTTAGACTCATCATAGCT+AGG | - | chr8_2:18224730-18224749 | Msa1238230:intron | 35.0% |
| CTATGTGCTACATTGTAAAG+CGG | + | chr8_2:18224968-18224987 | None:intergenic | 35.0% | |
| ATCTCAATGGGTAAAATCAG+CGG | - | chr8_2:18225075-18225094 | Msa1238230:intron | 35.0% | |
| TGCATCTAAATCAAGAGAAG+GGG | + | chr8_2:18225122-18225141 | None:intergenic | 35.0% | |
| CTTGCATCTAAATCAAGAGA+AGG | + | chr8_2:18225124-18225143 | None:intergenic | 35.0% | |
| AGTGGAGATATACGAAGTTA+AGG | - | chr8_2:18225180-18225199 | Msa1238230:intron | 35.0% | |
| GTGGAGATATACGAAGTTAA+GGG | - | chr8_2:18225181-18225200 | Msa1238230:intron | 35.0% | |
| GGACAACAATATTCAACGAT+TGG | + | chr8_2:18225210-18225229 | None:intergenic | 35.0% | |
| ATGAGTTTAAGCTTGTGCTA+TGG | - | chr8_2:18225350-18225369 | Msa1238230:intron | 35.0% | |
| TGACTAGGGGATAAAAGCTA+AGG | - | chr8_2:18218751-18218770 | Msa1238230:exon | 40.0% | |
| TAGGGGATAAAAGCTAAGGT+AGG | - | chr8_2:18218755-18218774 | Msa1238230:exon | 40.0% | |
| AAACCAACTCAGAACCTGTT+TGG | - | chr8_2:18219384-18219403 | Msa1238230:intron | 40.0% | |
| CATCGCATTAACTTCCATTG+AGG | + | chr8_2:18219805-18219824 | None:intergenic | 40.0% | |
| CTCAATGGAAGTTAATGCGA+TGG | - | chr8_2:18219803-18219822 | Msa1238230:intron | 40.0% | |
| TATGAATCTCTTCTCCATCG+TGG | + | chr8_2:18219833-18219852 | None:intergenic | 40.0% | |
| TGCAGAGAAGTAATCCCAAA+AGG | - | chr8_2:18219955-18219974 | Msa1238230:intron | 40.0% | |
| AAGTAATCCCAAAAGGCGAA+GGG | - | chr8_2:18219962-18219981 | Msa1238230:intron | 40.0% | |
| CGAAGGGATAAGGTTTACAT+TGG | - | chr8_2:18219978-18219997 | Msa1238230:intron | 40.0% | |
| GATAAGGTTTACATTGGGTG+TGG | - | chr8_2:18219984-18220003 | Msa1238230:intron | 40.0% | |
| CGCTATCAAATCATGTTGTC+TGG | - | chr8_2:18220116-18220135 | Msa1238230:intron | 40.0% | |
| GATGAATATGCTGCTACCTT+TGG | - | chr8_2:18220600-18220619 | Msa1238230:intron | 40.0% | |
| ! | GTTTCTAAAAGTGGATCCTC+TGG | - | chr8_2:18220822-18220841 | Msa1238230:CDS | 40.0% |
| TTGGAAATAGCTACCACACT+AGG | - | chr8_2:18220862-18220881 | Msa1238230:intron | 40.0% | |
| TGGAAATAGCTACCACACTA+GGG | - | chr8_2:18220863-18220882 | Msa1238230:intron | 40.0% | |
| ! | CCACTCATGAACTCATTTTC+AGG | + | chr8_2:18221014-18221033 | None:intergenic | 40.0% |
| CCTGAAAATGAGTTCATGAG+TGG | - | chr8_2:18221011-18221030 | Msa1238230:intron | 40.0% | |
| AAAATGAGTTCATGAGTGGC+AGG | - | chr8_2:18221015-18221034 | Msa1238230:intron | 40.0% | |
| TCTCGGAATGAACCTAATTC+CGG | - | chr8_2:18221062-18221081 | Msa1238230:CDS | 40.0% | |
| ! | TATATGATAACGTGACAGGC+AGG | + | chr8_2:18221252-18221271 | None:intergenic | 40.0% |
| !!! | ATTTGCTGCTTTTCAGGTTC+AGG | - | chr8_2:18221350-18221369 | Msa1238230:CDS | 40.0% |
| TCTGTAGCTAGGTTATCTGT+TGG | - | chr8_2:18221986-18222005 | Msa1238230:CDS | 40.0% | |
| CGTAGGTTTATGAACTAGGT+TGG | - | chr8_2:18222038-18222057 | Msa1238230:CDS | 40.0% | |
| !! | CTAATCTAAGCTCTGAAGCA+CGG | - | chr8_2:18222187-18222206 | Msa1238230:intron | 40.0% |
| !! | TAATCTAAGCTCTGAAGCAC+GGG | - | chr8_2:18222188-18222207 | Msa1238230:intron | 40.0% |
| TAAATCCAGTAGTTGCTGGA+AGG | + | chr8_2:18222440-18222459 | None:intergenic | 40.0% | |
| GTGATAAATCCAGTAGTTGC+TGG | + | chr8_2:18222444-18222463 | None:intergenic | 40.0% | |
| !! | ATTACAGGTCATTGACTTCC+AGG | - | chr8_2:18222698-18222717 | Msa1238230:intron | 40.0% |
| !! | ACAACTTGATAATGGACGGA+AGG | + | chr8_2:18222730-18222749 | None:intergenic | 40.0% |
| AGTTGTAGAGTTCTCTGTTC+GGG | - | chr8_2:18222744-18222763 | Msa1238230:intron | 40.0% | |
| ACCAGTTCCAGATAAACTTC+TGG | - | chr8_2:18222785-18222804 | Msa1238230:intron | 40.0% | |
| ! | TCCAGAAGTTTATCTGGAAC+TGG | + | chr8_2:18222789-18222808 | None:intergenic | 40.0% |
| !! | TCCAGATAAACTTCTGGAGT+TGG | - | chr8_2:18222791-18222810 | Msa1238230:intron | 40.0% |
| ACCAACTCCAGAAGTTTATC+TGG | + | chr8_2:18222795-18222814 | None:intergenic | 40.0% | |
| GTTTCTTACAGGATTGTGGA+TGG | - | chr8_2:18222996-18223015 | Msa1238230:intron | 40.0% | |
| TTACAGGATTGTGGATGGAA+AGG | - | chr8_2:18223001-18223020 | Msa1238230:intron | 40.0% | |
| GGATCTACAATGGTTGCTAT+AGG | + | chr8_2:18223104-18223123 | None:intergenic | 40.0% | |
| GCATGAACATGGATCTACAA+TGG | + | chr8_2:18223114-18223133 | None:intergenic | 40.0% | |
| GATATTAGGTTACGCATGGA+TGG | - | chr8_2:18223368-18223387 | Msa1238230:intron | 40.0% | |
| ! | TTTACGGCGTGTGTTTTGTA+GGG | + | chr8_2:18223634-18223653 | None:intergenic | 40.0% |
| ! | TTTTACGGCGTGTGTTTTGT+AGG | + | chr8_2:18223635-18223654 | None:intergenic | 40.0% |
| !! | CATGTGATCAAGCATTGACA+TGG | + | chr8_2:18223766-18223785 | None:intergenic | 40.0% |
| CATGTCAATGCTTGATCACA+TGG | - | chr8_2:18223764-18223783 | Msa1238230:intron | 40.0% | |
| TAAATGGTGTAGCGTTCATG+TGG | - | chr8_2:18223794-18223813 | Msa1238230:intron | 40.0% | |
| CAAAAGAAAGTCCTAACTCG+TGG | - | chr8_2:18223902-18223921 | Msa1238230:intron | 40.0% | |
| AAGAAAGGCCAATAGAGGAA+GGG | + | chr8_2:18224210-18224229 | None:intergenic | 40.0% | |
| TAAGAAAGGCCAATAGAGGA+AGG | + | chr8_2:18224211-18224230 | None:intergenic | 40.0% | |
| ! | TGAAGTGTAGGTGCTACATA+GGG | + | chr8_2:18224440-18224459 | None:intergenic | 40.0% |
| GGATCATTTCCCATGAAGTA+CGG | + | chr8_2:18224590-18224609 | None:intergenic | 40.0% | |
| TCATAGCTAGGTTCTTCTTC+AGG | - | chr8_2:18224742-18224761 | Msa1238230:intron | 40.0% | |
| !! | TGAGGAGGATTTATCGGTTT+CGG | + | chr8_2:18224891-18224910 | None:intergenic | 40.0% |
| ! | AGGTGAAACAAATTCTGAGG+AGG | + | chr8_2:18224906-18224925 | None:intergenic | 40.0% |
| ! | TCCTCAGAATTTGTTTCACC+TGG | - | chr8_2:18224905-18224924 | Msa1238230:intron | 40.0% |
| ACCAGGTGAAACAAATTCTG+AGG | + | chr8_2:18224909-18224928 | None:intergenic | 40.0% | |
| CGATATCAGGAGGAAAATGT+GGG | + | chr8_2:18225033-18225052 | None:intergenic | 40.0% | |
| TCGATATCAGGAGGAAAATG+TGG | + | chr8_2:18225034-18225053 | None:intergenic | 40.0% | |
| ! | ATTTTCCTCCTGATATCGAG+AGG | - | chr8_2:18225035-18225054 | Msa1238230:intron | 40.0% |
| TGTTTCAACCTCTCGATATC+AGG | + | chr8_2:18225046-18225065 | None:intergenic | 40.0% | |
| GTGAGTACCTTGATCCTGAT+GGG | + | chr8_2:18218782-18218801 | None:intergenic | 45.0% | |
| ATTAATGCCCGATGTTTGGC+TGG | - | chr8_2:18219275-18219294 | Msa1238230:CDS | 45.0% | |
| ! | CAACCGATTTCAATCCTCTG+CGG | + | chr8_2:18219306-18219325 | None:intergenic | 45.0% |
| !! | GATCCAAACAGGTTCTGAGT+TGG | + | chr8_2:18219390-18219409 | None:intergenic | 45.0% |
| GAAGTAATCCCAAAAGGCGA+AGG | - | chr8_2:18219961-18219980 | Msa1238230:intron | 45.0% | |
| ! | ACCTTATCCCTTCGCCTTTT+GGG | + | chr8_2:18219972-18219991 | None:intergenic | 45.0% |
| ! | AACCTTATCCCTTCGCCTTT+TGG | + | chr8_2:18219973-18219992 | None:intergenic | 45.0% |
| !! | ATTTGGTGGTGATAGGCCTT+CGG | - | chr8_2:18220013-18220032 | Msa1238230:intron | 45.0% |
| TTATCTGGTCCTTGAATGCC+TGG | - | chr8_2:18220073-18220092 | Msa1238230:intron | 45.0% | |
| ! | ATCATGTTGTCTGGTGGTGA+TGG | - | chr8_2:18220125-18220144 | Msa1238230:intron | 45.0% |
| TCGCGATTGGTGGAAAATAG+TGG | + | chr8_2:18220435-18220454 | None:intergenic | 45.0% | |
| TCAGTGTTGTCAATCGCGAT+TGG | + | chr8_2:18220448-18220467 | None:intergenic | 45.0% | |
| AACAGAAAGTCTTGCCTGCA+AGG | + | chr8_2:18220505-18220524 | None:intergenic | 45.0% | |
| ! | TATGCTGCTACCTTTGGCTT+TGG | - | chr8_2:18220606-18220625 | Msa1238230:intron | 45.0% |
| !! | CTACCTTTGGCTTTGGAAAG+AGG | - | chr8_2:18220613-18220632 | Msa1238230:intron | 45.0% |
| GTTCCTCTTTCCAAAGCCAA+AGG | + | chr8_2:18220619-18220638 | None:intergenic | 45.0% | |
| AGAAACATCAAGCCCTAGTG+TGG | + | chr8_2:18220878-18220897 | None:intergenic | 45.0% | |
| CTCGGAATGAACCTAATTCC+GGG | - | chr8_2:18221063-18221082 | Msa1238230:CDS | 45.0% | |
| TCGGAATGAACCTAATTCCG+GGG | - | chr8_2:18221064-18221083 | Msa1238230:CDS | 45.0% | |
| AATGAACCTAATTCCGGGGA+GGG | - | chr8_2:18221068-18221087 | Msa1238230:CDS | 45.0% | |
| !! | AAGGGTATCAGCACCTACTT+GGG | - | chr8_2:18221633-18221652 | Msa1238230:CDS | 45.0% |
| AATAGGAGAAGCTCCCAAGT+AGG | + | chr8_2:18221649-18221668 | None:intergenic | 45.0% | |
| ! | GAGTTAGAGCATCTAGCTCA+AGG | - | chr8_2:18222070-18222089 | Msa1238230:intron | 45.0% |
| ! | GCATCTAGCTCAAGGATCTT+TGG | - | chr8_2:18222078-18222097 | Msa1238230:intron | 45.0% |
| ! | GGCAACCACATTCTAGAAGA+TGG | + | chr8_2:18222108-18222127 | None:intergenic | 45.0% |
| AATGTGGTTGCCAACTCACA+GGG | - | chr8_2:18222116-18222135 | Msa1238230:intron | 45.0% | |
| TGAAATATCCCCCTGTGAGT+TGG | + | chr8_2:18222129-18222148 | None:intergenic | 45.0% | |
| TGAAGCACGGGCACAAATAT+TGG | - | chr8_2:18222200-18222219 | Msa1238230:intron | 45.0% | |
| GTATCTGACACCAACACATC+TGG | + | chr8_2:18222286-18222305 | None:intergenic | 45.0% | |
| !! | TGTTGGTGTCAGATACCAGT+CGG | - | chr8_2:18222290-18222309 | Msa1238230:intron | 45.0% |
| GTTGCTGGAAGGACATATCT+CGG | + | chr8_2:18222429-18222448 | None:intergenic | 45.0% | |
| TATGTCCTTCCAGCAACTAC+TGG | - | chr8_2:18222432-18222451 | Msa1238230:CDS | 45.0% | |
| TTTCGATGGACAAGTGTGTG+TGG | - | chr8_2:18222483-18222502 | Msa1238230:intron | 45.0% | |
| !! | ACTTCTGGAGTTGGTTCCAA+AGG | - | chr8_2:18222800-18222819 | Msa1238230:intron | 45.0% |
| AGGATTGTGGATGGAAAGGA+TGG | - | chr8_2:18223005-18223024 | Msa1238230:intron | 45.0% | |
| GGATTGTGGATGGAAAGGAT+GGG | - | chr8_2:18223006-18223025 | Msa1238230:intron | 45.0% | |
| GATTGTGGATGGAAAGGATG+GGG | - | chr8_2:18223007-18223026 | Msa1238230:intron | 45.0% | |
| GGATGGGGAGAGATATCTTA+TGG | - | chr8_2:18223022-18223041 | Msa1238230:intron | 45.0% | |
| TGGGGAGAGATATCTTATGG+AGG | - | chr8_2:18223025-18223044 | Msa1238230:intron | 45.0% | |
| !! | TGGATGGACTTTTTGAGCAG+AGG | - | chr8_2:18223384-18223403 | Msa1238230:intron | 45.0% |
| !! | GGATGGACTTTTTGAGCAGA+GGG | - | chr8_2:18223385-18223404 | Msa1238230:intron | 45.0% |
| TTGTATACAAATGGACCCGC+CGG | - | chr8_2:18223443-18223462 | Msa1238230:CDS | 45.0% | |
| AGAAAGTCCTAACTCGTGGA+TGG | - | chr8_2:18223906-18223925 | Msa1238230:intron | 45.0% | |
| !! | TCATGTGACAAGTATCGACC+TGG | - | chr8_2:18223947-18223966 | Msa1238230:CDS | 45.0% |
| ACGATGTCACTAACAGAACG+CGG | + | chr8_2:18224117-18224136 | None:intergenic | 45.0% | |
| TCTTCTTCCCCTTCCTCTAT+TGG | - | chr8_2:18224199-18224218 | Msa1238230:intron | 45.0% | |
| AGAAAGGCCAATAGAGGAAG+GGG | + | chr8_2:18224209-18224228 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTAGGTGCTACAT+AGG | + | chr8_2:18224441-18224460 | None:intergenic | 45.0% |
| GCACCTACACTTCAGATTGA+AGG | - | chr8_2:18224446-18224465 | Msa1238230:intron | 45.0% | |
| TGTCAGTGTCGTGTCTTTCT+TGG | + | chr8_2:18224494-18224513 | None:intergenic | 45.0% | |
| GACACGACACTGACATATGT+TGG | - | chr8_2:18224499-18224518 | Msa1238230:intron | 45.0% | |
| ATGAAGTACGGACAGACACA+TGG | + | chr8_2:18224578-18224597 | None:intergenic | 45.0% | |
| ATGTGTCTGTCCGTACTTCA+TGG | - | chr8_2:18224577-18224596 | Msa1238230:intron | 45.0% | |
| TGTGTCTGTCCGTACTTCAT+GGG | - | chr8_2:18224578-18224597 | Msa1238230:intron | 45.0% | |
| TCCTTCTGAACTGCTGCAAT+TGG | - | chr8_2:18224607-18224626 | Msa1238230:intron | 45.0% | |
| TCCAATTGCAGCAGTTCAGA+AGG | + | chr8_2:18224611-18224630 | None:intergenic | 45.0% | |
| ! | GCTAGGTTCTTCTTCAGGTT+AGG | - | chr8_2:18224747-18224766 | Msa1238230:intron | 45.0% |
| ! | TTAGGCGTGAAGACGTTTTC+TGG | - | chr8_2:18224765-18224784 | Msa1238230:intron | 45.0% |
| !! | GAAGACGTTTTCTGGCGAAT+CGG | - | chr8_2:18224773-18224792 | Msa1238230:intron | 45.0% |
| !! | AAGACGTTTTCTGGCGAATC+GGG | - | chr8_2:18224774-18224793 | Msa1238230:intron | 45.0% |
| AATGTAGCACATAGCAGAGC+TGG | - | chr8_2:18224974-18224993 | Msa1238230:intron | 45.0% | |
| ACATAGCAGAGCTGGAGATA+AGG | - | chr8_2:18224982-18225001 | Msa1238230:intron | 45.0% | |
| CATAGCAGAGCTGGAGATAA+GGG | - | chr8_2:18224983-18225002 | Msa1238230:intron | 45.0% | |
| TTCAACCTCTCGATATCAGG+AGG | + | chr8_2:18225043-18225062 | None:intergenic | 45.0% | |
| GTTGTCCGGAATGTCTTAGA+TGG | - | chr8_2:18225223-18225242 | Msa1238230:intron | 45.0% | |
| ! | CACCACCATCTAAGACATTC+CGG | + | chr8_2:18225231-18225250 | None:intergenic | 45.0% |
| ACTGTTCGCGAAGAATTGAC+CGG | - | chr8_2:18225254-18225273 | Msa1238230:intron | 45.0% | |
| CTGAAATGGTCTTTCCATGC+CGG | + | chr8_2:18225276-18225295 | None:intergenic | 45.0% | |
| AAGGAGGCAACACAACTTGT+TGG | + | chr8_2:18225312-18225331 | None:intergenic | 45.0% | |
| AAGCTAAGGTAGGTCCCATC+AGG | - | chr8_2:18218765-18218784 | Msa1238230:exon | 50.0% | |
| GGTGAGTACCTTGATCCTGA+TGG | + | chr8_2:18218783-18218802 | None:intergenic | 50.0% | |
| CATTCTCTCCGGTCAATCCA+CGG | - | chr8_2:18219217-18219236 | Msa1238230:CDS | 50.0% | |
| ! | TTTAACGGCCGTGGATTGAC+CGG | + | chr8_2:18219228-18219247 | None:intergenic | 50.0% |
| TGGCCGCAGAGGATTGAAAT+CGG | - | chr8_2:18219300-18219319 | Msa1238230:CDS | 50.0% | |
| CGCAGAGGATTGAAATCGGT+TGG | - | chr8_2:18219304-18219323 | Msa1238230:CDS | 50.0% | |
| ! | TTTTGCTAGCAGCGCCTCAA+TGG | - | chr8_2:18219788-18219807 | Msa1238230:intron | 50.0% |
| AATGCGATGGAAGTCCACGA+TGG | - | chr8_2:18219816-18219835 | Msa1238230:intron | 50.0% | |
| TCCCAAAAGGCGAAGGGATA+AGG | - | chr8_2:18219968-18219987 | Msa1238230:intron | 50.0% | |
| GTTTACATTGGGTGTGGAGC+AGG | - | chr8_2:18219990-18220009 | Msa1238230:intron | 50.0% | |
| ATTGGGTGTGGAGCAGGATT+TGG | - | chr8_2:18219996-18220015 | Msa1238230:intron | 50.0% | |
| !! | GAGCAGGATTTGGTGGTGAT+AGG | - | chr8_2:18220006-18220025 | Msa1238230:intron | 50.0% |
| AGCAACTTAAGAGCAGCCGA+AGG | + | chr8_2:18220032-18220051 | None:intergenic | 50.0% | |
| GTGTTGTCAATCGCGATTGG+TGG | + | chr8_2:18220445-18220464 | None:intergenic | 50.0% | |
| !! | ATACTCGGTGTTAGCCTTGC+AGG | - | chr8_2:18220488-18220507 | Msa1238230:intron | 50.0% |
| TCCTCTGGGTGCTCAACAAA+AGG | - | chr8_2:18220837-18220856 | Msa1238230:CDS | 50.0% | |
| ! | ACCTTTTGTTGAGCACCCAG+AGG | + | chr8_2:18220841-18220860 | None:intergenic | 50.0% |
| GGGTGCTCAACAAAAGGTCT+TGG | - | chr8_2:18220843-18220862 | Msa1238230:intron | 50.0% | |
| TTCTGTCGCTGTTGCTCATG+AGG | - | chr8_2:18220894-18220913 | Msa1238230:intron | 50.0% | |
| GAATGAACCTAATTCCGGGG+AGG | - | chr8_2:18221067-18221086 | Msa1238230:CDS | 50.0% | |
| ATGAACCTAATTCCGGGGAG+GGG | - | chr8_2:18221069-18221088 | Msa1238230:CDS | 50.0% | |
| !! | GAAGGGTATCAGCACCTACT+TGG | - | chr8_2:18221632-18221651 | Msa1238230:CDS | 50.0% |
| CTAGCTCAAGGATCTTTGGC+TGG | - | chr8_2:18222082-18222101 | Msa1238230:intron | 50.0% | |
| !! | GCTGGCCATCTTCTAGAATG+TGG | - | chr8_2:18222100-18222119 | Msa1238230:intron | 50.0% |
| GAATGTGGTTGCCAACTCAC+AGG | - | chr8_2:18222115-18222134 | Msa1238230:intron | 50.0% | |
| ATGTGGTTGCCAACTCACAG+GGG | - | chr8_2:18222117-18222136 | Msa1238230:intron | 50.0% | |
| GGGGGATATTTCATGCATCC+AGG | - | chr8_2:18222136-18222155 | Msa1238230:intron | 50.0% | |
| GTCAGATACCAGTCGGACAA+CGG | - | chr8_2:18222297-18222316 | Msa1238230:intron | 50.0% | |
| TGGACAAGTGTGTGTGGCAA+AGG | - | chr8_2:18222489-18222508 | Msa1238230:intron | 50.0% | |
| TGGCAAAGGCTGAAGGTAGT+GGG | - | chr8_2:18222503-18222522 | Msa1238230:intron | 50.0% | |
| CTCAAAGCTGCTAGCAGCAA+CGG | - | chr8_2:18223317-18223336 | Msa1238230:intron | 50.0% | |
| TAGTGTGCCATCCACGAGTT+AGG | + | chr8_2:18223916-18223935 | None:intergenic | 50.0% | |
| CAGAACGCGGGAGTAATACA+TGG | + | chr8_2:18224104-18224123 | None:intergenic | 50.0% | |
| CGATGTCACTAACAGAACGC+GGG | + | chr8_2:18224116-18224135 | None:intergenic | 50.0% | |
| ATGGACACCAGACACGACAT+TGG | + | chr8_2:18224559-18224578 | None:intergenic | 50.0% | |
| GCAGGTATGCAACTTCTACC+AGG | + | chr8_2:18224926-18224945 | None:intergenic | 50.0% | |
| AGTTGCATACCTGCTCCATC+AGG | - | chr8_2:18224932-18224951 | Msa1238230:intron | 50.0% | |
| ATCTTCTGACCTGATGGAGC+AGG | + | chr8_2:18224944-18224963 | None:intergenic | 50.0% | |
| AGCGGAATCTTCTGACCTGA+TGG | + | chr8_2:18224950-18224969 | None:intergenic | 50.0% | |
| ATCAGCGGTTTCACCTCTTC+TGG | - | chr8_2:18225090-18225109 | Msa1238230:intron | 50.0% | |
| GAAGGGGACAAATCCAGAAG+AGG | + | chr8_2:18225106-18225125 | None:intergenic | 50.0% | |
| GTCCGGAATGTCTTAGATGG+TGG | - | chr8_2:18225226-18225245 | Msa1238230:intron | 50.0% | |
| GGTAGGTCCCATCAGGATCA+AGG | - | chr8_2:18218772-18218791 | Msa1238230:CDS | 55.0% | |
| TCTGGTCCTTGAATGCCTGG+CGG | - | chr8_2:18220076-18220095 | Msa1238230:intron | 55.0% | |
| TGAACCTAATTCCGGGGAGG+GGG | - | chr8_2:18221070-18221089 | Msa1238230:CDS | 55.0% | |
| GTTTGTATAACCCCCCTCCC+CGG | + | chr8_2:18221084-18221103 | None:intergenic | 55.0% | |
| TGTGGTTGCCAACTCACAGG+GGG | - | chr8_2:18222118-18222137 | Msa1238230:intron | 55.0% | |
| TAGTGTGTCCGTTGTCCGAC+TGG | + | chr8_2:18222308-18222327 | None:intergenic | 55.0% | |
| GTGTGTGTGGCAAAGGCTGA+AGG | - | chr8_2:18222496-18222515 | Msa1238230:intron | 55.0% | |
| GTGGCAAAGGCTGAAGGTAG+TGG | - | chr8_2:18222502-18222521 | Msa1238230:intron | 55.0% | |
| GGCAAAGGCTGAAGGTAGTG+GGG | - | chr8_2:18222504-18222523 | Msa1238230:intron | 55.0% | |
| ! | GCAAAGGCTGAAGGTAGTGG+GGG | - | chr8_2:18222505-18222524 | Msa1238230:intron | 55.0% |
| ATGGACGGAAGGACACATCC+TGG | + | chr8_2:18222719-18222738 | None:intergenic | 55.0% | |
| CGTTGCTGCTAGCAGCTTTG+AGG | + | chr8_2:18223319-18223338 | None:intergenic | 55.0% | |
| TATACAAATGGACCCGCCGG+TGG | - | chr8_2:18223446-18223465 | Msa1238230:CDS | 55.0% | |
| !! | TCTGGCGAATCGGGTTGAAG+AGG | - | chr8_2:18224783-18224802 | Msa1238230:intron | 55.0% |
| TCGCGAAGAATTGACCGGCA+TGG | - | chr8_2:18225259-18225278 | Msa1238230:intron | 55.0% | |
| TGCCCGATGTTTGGCTGGAG+TGG | - | chr8_2:18219280-18219299 | Msa1238230:CDS | 60.0% | |
| GGCCACTCCAGCCAAACATC+GGG | + | chr8_2:18219285-18219304 | None:intergenic | 60.0% | |
| CGGCCACTCCAGCCAAACAT+CGG | + | chr8_2:18219286-18219305 | None:intergenic | 60.0% | |
| GGGTGTGGAGCAGGATTTGG+TGG | - | chr8_2:18219999-18220018 | Msa1238230:intron | 60.0% | |
| TACGCTCCGCCAGGCATTCA+AGG | + | chr8_2:18220085-18220104 | None:intergenic | 60.0% | |
| GAACCTAATTCCGGGGAGGG+GGG | - | chr8_2:18221071-18221090 | Msa1238230:CDS | 60.0% | |
| TAACCCCCCTCCCCGGAATT+AGG | + | chr8_2:18221077-18221096 | None:intergenic | 60.0% | |
| TGACCTGATACCGCCACCAC+CGG | + | chr8_2:18223465-18223484 | None:intergenic | 60.0% | |
| TTTGGCTGGAGTGGCCGCAG+AGG | - | chr8_2:18219289-18219308 | Msa1238230:CDS | 65.0% | |
| ACAAATGGACCCGCCGGTGG+TGG | - | chr8_2:18223449-18223468 | Msa1238230:CDS | 65.0% | |
| CGGCTAGAGTACGCTCCGCC+AGG | + | chr8_2:18220094-18220113 | None:intergenic | 70.0% | |
| ! | AATGGACCCGCCGGTGGTGG+CGG | - | chr8_2:18223452-18223471 | Msa1238230:CDS | 70.0% |
| CTGATACCGCCACCACCGGC+GGG | + | chr8_2:18223461-18223480 | None:intergenic | 70.0% | |
| CCTGATACCGCCACCACCGG+CGG | + | chr8_2:18223462-18223481 | None:intergenic | 70.0% | |
| !! | CCGCCGGTGGTGGCGGTATC+AGG | - | chr8_2:18223459-18223478 | Msa1238230:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 18218584 | 18225519 | 18218584 | ID=Msa1238230;Name=Msa1238230 |
| chr8_2 | mRNA | 18218584 | 18225519 | 18218584 | ID=Msa1238230-mRNA-1;Parent=Msa1238230;Name=Msa1238230-mRNA-1;_AED=0.23;_eAED=0.23;_QI=194|0.92|0.92|1|0.84|0.78|14|186|629 |
| chr8_2 | exon | 18218584 | 18219339 | 18218584 | ID=Msa1238230-mRNA-1:exon:6890;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18219911 | 18219950 | 18219911 | ID=Msa1238230-mRNA-1:exon:6889;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18220623 | 18220861 | 18220623 | ID=Msa1238230-mRNA-1:exon:6888;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18221016 | 18221096 | 18221016 | ID=Msa1238230-mRNA-1:exon:6887;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18221282 | 18221398 | 18221282 | ID=Msa1238230-mRNA-1:exon:6886;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18221497 | 18221687 | 18221497 | ID=Msa1238230-mRNA-1:exon:6885;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18221946 | 18222060 | 18221946 | ID=Msa1238230-mRNA-1:exon:6884;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18222354 | 18222467 | 18222354 | ID=Msa1238230-mRNA-1:exon:6883;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18223188 | 18223270 | 18223188 | ID=Msa1238230-mRNA-1:exon:6882;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18223439 | 18223513 | 18223439 | ID=Msa1238230-mRNA-1:exon:6881;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18223942 | 18224143 | 18223942 | ID=Msa1238230-mRNA-1:exon:6880;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18224234 | 18224303 | 18224234 | ID=Msa1238230-mRNA-1:exon:6879;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18225310 | 18225350 | 18225310 | ID=Msa1238230-mRNA-1:exon:6878;Parent=Msa1238230-mRNA-1 |
| chr8_2 | exon | 18225374 | 18225519 | 18225374 | ID=Msa1238230-mRNA-1:exon:6877;Parent=Msa1238230-mRNA-1 |
| chr8_2 | five_prime_UTR | 18225374 | 18225519 | 18225374 | ID=Msa1238230-mRNA-1:five_prime_utr;Parent=Msa1238230-mRNA-1 |
| chr8_2 | five_prime_UTR | 18225310 | 18225350 | 18225310 | ID=Msa1238230-mRNA-1:five_prime_utr;Parent=Msa1238230-mRNA-1 |
| chr8_2 | five_prime_UTR | 18224297 | 18224303 | 18224297 | ID=Msa1238230-mRNA-1:five_prime_utr;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18224234 | 18224296 | 18224234 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18223942 | 18224143 | 18223942 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18223439 | 18223513 | 18223439 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18223188 | 18223270 | 18223188 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18222354 | 18222467 | 18222354 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18221946 | 18222060 | 18221946 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18221497 | 18221687 | 18221497 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18221282 | 18221398 | 18221282 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18221016 | 18221096 | 18221016 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18220623 | 18220861 | 18220623 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18219911 | 18219950 | 18219911 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | CDS | 18218770 | 18219339 | 18218770 | ID=Msa1238230-mRNA-1:cds;Parent=Msa1238230-mRNA-1 |
| chr8_2 | three_prime_UTR | 18218584 | 18218769 | 18218584 | ID=Msa1238230-mRNA-1:three_prime_utr;Parent=Msa1238230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
