Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191370 | XP_013444884.1 | 85.516 | 649 | 29 | 3 | 1 | 584 | 1 | 649 | 0.0 | 1080 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0626820 | Msa1191370 | 0.801691 | 7.991903e-49 | -8.615850e-47 |
| Msa0807470 | Msa1191370 | 0.812264 | 4.626351e-51 | -8.615850e-47 |
| Msa0201070 | Msa1191370 | 0.804799 | 1.816268e-49 | -8.615850e-47 |
| Msa1191370 | Msa1238230 | 0.866021 | 3.865051e-65 | -8.615850e-47 |
| Msa0493000 | Msa1191370 | 0.811648 | 6.302839e-51 | -8.615850e-47 |
| Msa0537720 | Msa1191370 | 0.814400 | 1.570566e-51 | -8.615850e-47 |
| Msa0967280 | Msa1191370 | 0.834078 | 3.690508e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191370 | MtrunA17_Chr8g0349381 | 85.516 | 649 | 29 | 3 | 1 | 584 | 1 | 649 | 0.0 | 1080 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1191370 | AT1G01770.1 | 61.224 | 637 | 168 | 10 | 12 | 582 | 8 | 631 | 0.0 | 734 |
Find 156 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATACTTTCTTATATAAT+TGG | 0.110694 | 8_1:+35560319 | Msa1191370:CDS |
| GAACAATTACTCTATGAAAT+TGG | 0.161560 | 8_1:+35559588 | Msa1191370:CDS |
| TCCCCTATTTGCATGGAAAT+TGG | 0.233664 | 8_1:-35555782 | None:intergenic |
| CCGCCGGTGGTGGCGGTATC+AGG | 0.235370 | 8_1:+35560494 | Msa1191370:CDS |
| AACTTGCATAATTACCAATA+TGG | 0.275625 | 8_1:+35557740 | Msa1191370:CDS |
| ATACCAATTTCCATGCAAAT+AGG | 0.284250 | 8_1:+35555779 | Msa1191370:five_prime_UTR |
| ATCAGCGGTTTCACCTCTTC+TGG | 0.288463 | 8_1:+35562126 | Msa1191370:CDS |
| CAAGAAATCAAAGAGATAAA+TGG | 0.297592 | 8_1:+35562176 | Msa1191370:CDS |
| AACAATTACTCTATGAAATT+GGG | 0.299395 | 8_1:+35559589 | Msa1191370:CDS |
| ATTACAGGTCATTGACTTCC+AGG | 0.306261 | 8_1:+35559733 | Msa1191370:intron |
| TGTTTCAACCTCTCGATATC+AGG | 0.306477 | 8_1:-35562079 | None:intergenic |
| TGAGGAGGATTTATCGGTTT+CGG | 0.323533 | 8_1:-35561924 | None:intergenic |
| ATAGTAACCTTTCAAGCCTT+TGG | 0.336089 | 8_1:+35555643 | None:intergenic |
| AAAACTTAAAACTGTTGTTT+TGG | 0.340580 | 8_1:-35555689 | None:intergenic |
| ATTGGCTGTGGAGCAGGATT+TGG | 0.343927 | 8_1:+35557101 | Msa1191370:CDS |
| GATGAATATGCTGCTACCTT+TGG | 0.345618 | 8_1:+35557704 | Msa1191370:CDS |
| AAATTCTGAGGAGGATTTAT+CGG | 0.348422 | 8_1:-35561930 | None:intergenic |
| CTTGATGTAATTATCACATT+TGG | 0.348982 | 8_1:-35558728 | None:intergenic |
| GGATGGGGAGAGATATCTTA+TGG | 0.351860 | 8_1:+35560057 | Msa1191370:CDS |
| ATTCTTACTAGCACCCATAT+TGG | 0.353195 | 8_1:-35557754 | None:intergenic |
| GAGGTGTCTGTTACAAATTT+AGG | 0.356765 | 8_1:+35558017 | Msa1191370:CDS |
| AGACGAATACTGAAGATATT+AGG | 0.357654 | 8_1:+35560389 | Msa1191370:CDS |
| CGTTGCTGCTAGCAGCTTTG+AGG | 0.360697 | 8_1:-35560351 | None:intergenic |
| ATTTGGCGGTGACCGGCCTT+TGG | 0.364922 | 8_1:+35557118 | Msa1191370:CDS |
| TACCAATTTCCATGCAAATA+GGG | 0.365183 | 8_1:+35555780 | Msa1191370:five_prime_UTR |
| GCATCTAGCTCAAGGATCTT+TGG | 0.367705 | 8_1:+35559113 | Msa1191370:CDS |
| TTTATGAACTAGGTTGGAAC+TGG | 0.373616 | 8_1:+35559079 | Msa1191370:CDS |
| AGTGGAGATATACGAAGTTA+AGG | 0.377512 | 8_1:+35562216 | Msa1191370:CDS |
| CAATTATATAAGAAAGTATA+TGG | 0.381854 | 8_1:-35560318 | None:intergenic |
| TATGCTGCTACCTTTGGCTT+TGG | 0.387976 | 8_1:+35557710 | Msa1191370:CDS |
| ATATACTTTCTTATATAATT+GGG | 0.391627 | 8_1:+35560320 | Msa1191370:CDS |
| GTTTCTAAAAGTGGATCCTC+TGG | 0.399434 | 8_1:+35557926 | Msa1191370:intron |
| AGTTGTAGAGTTCTCTGTTC+GGG | 0.399885 | 8_1:+35559779 | Msa1191370:CDS |
| GTGGAGATATACGAAGTTAA+GGG | 0.401550 | 8_1:+35562217 | Msa1191370:CDS |
| TACGCTCCGCCAAGCATTCA+AGG | 0.402522 | 8_1:-35557187 | None:intergenic |
| CATAGCAGAGCTGGAGATAA+GGG | 0.402527 | 8_1:+35562019 | Msa1191370:CDS |
| TGCTTTATTCTTAGCACCTA+TGG | 0.403777 | 8_1:+35558763 | Msa1191370:CDS |
| AGAACTCTACAACTTGATAA+TGG | 0.409393 | 8_1:-35559770 | None:intergenic |
| TGGATGGAAGAAATATTTCC+TGG | 0.411706 | 8_1:+35560286 | Msa1191370:CDS |
| AGGATTGTGGATGGAAAGGA+TGG | 0.416631 | 8_1:+35560040 | Msa1191370:intron |
| GTTTACATTGGCTGTGGAGC+AGG | 0.418506 | 8_1:+35557095 | Msa1191370:CDS |
| GCACAATATAAGATCTGAAA+TGG | 0.424247 | 8_1:-35562323 | None:intergenic |
| CTACCTTTGGCTTTGGAAAG+AGG | 0.425238 | 8_1:+35557717 | Msa1191370:CDS |
| TTTACAGCGTTGTATACAAA+TGG | 0.427505 | 8_1:+35560469 | Msa1191370:CDS |
| CTCTTTATTAGGTTAGATCA+TGG | 0.428251 | 8_1:+35560266 | Msa1191370:intron |
| GAGCAGGATTTGGCGGTGAC+CGG | 0.428970 | 8_1:+35557111 | Msa1191370:CDS |
| TTATCTAGTCCTTGAATGCT+TGG | 0.436865 | 8_1:+35557178 | Msa1191370:CDS |
| CAACATGATTTGATAACGTT+CGG | 0.437142 | 8_1:-35557216 | None:intergenic |
| GAAGGGTATCAGCACCTACT+TGG | 0.447511 | 8_1:+35558667 | Msa1191370:intron |
| ACAATCTAACTTACTACATC+AGG | 0.448215 | 8_1:-35559633 | None:intergenic |
| TATACGTAGGTTTATGAACT+AGG | 0.449883 | 8_1:+35559069 | Msa1191370:intron |
| TCATAATTGTTTGATAAAGC+TGG | 0.451330 | 8_1:+35556953 | Msa1191370:CDS |
| ACAAATTATCACATCTCAAT+GGG | 0.452146 | 8_1:+35562099 | Msa1191370:CDS |
| AACAAATTATCACATCTCAA+TGG | 0.453645 | 8_1:+35562098 | Msa1191370:CDS |
| GATCAAGTACTTTATTTGAC+TGG | 0.455265 | 8_1:-35561853 | None:intergenic |
| GGGTGCTCAACAAAAGGTCT+TGG | 0.456993 | 8_1:+35557947 | Msa1191370:CDS |
| TCCTCTGGGTGCTCAACAAA+AGG | 0.457650 | 8_1:+35557941 | Msa1191370:CDS |
| GTGGCAAAGGCTGAAGGTAG+TGG | 0.462927 | 8_1:+35559537 | Msa1191370:CDS |
| CACCACCATCTAAGACATTC+CGG | 0.463376 | 8_1:-35562264 | None:intergenic |
| AATCGTTGAATATTGTTGTC+CGG | 0.466157 | 8_1:+35562245 | Msa1191370:CDS |
| GGACAACAATATTCAACGAT+TGG | 0.467117 | 8_1:-35562243 | None:intergenic |
| GAATGTTTCTTACAGGATTG+TGG | 0.470481 | 8_1:+35560027 | Msa1191370:intron |
| CGTTATCAAATCATGTTGTC+TGG | 0.471199 | 8_1:+35557221 | Msa1191370:CDS |
| ACTTGCATAATTACCAATAT+GGG | 0.471757 | 8_1:+35557741 | Msa1191370:CDS |
| TTGGAAATAGCTACCACACT+AGG | 0.472959 | 8_1:+35557966 | Msa1191370:CDS |
| ACATAGCAGAGCTGGAGATA+AGG | 0.473401 | 8_1:+35562018 | Msa1191370:CDS |
| AAGCTAAGGTAGGTCCCATC+AGG | 0.480178 | 8_1:+35555808 | Msa1191370:five_prime_UTR |
| GATAAGTGAAAATGATAAAG+TGG | 0.487061 | 8_1:+35562198 | Msa1191370:CDS |
| AAGTTGTAGAGTTCTCTGTT+CGG | 0.487844 | 8_1:+35559778 | Msa1191370:CDS |
| AAGGAGGCAACACAACTTGT+TGG | 0.490879 | 8_1:-35562345 | None:intergenic |
| TCCTCAGAATTTGTTTCACC+TGG | 0.491136 | 8_1:+35561941 | Msa1191370:CDS |
| CGTAGGTTTATGAACTAGGT+TGG | 0.493111 | 8_1:+35559073 | Msa1191370:intron |
| ATCAGGAGTCACATAAGCAC+TGG | 0.495783 | 8_1:-35559616 | None:intergenic |
| AATGGACCCGCCGGTGGTGG+CGG | 0.496512 | 8_1:+35560487 | Msa1191370:CDS |
| AGTTGCATACCTGCTCCATC+AGG | 0.496829 | 8_1:+35561968 | Msa1191370:CDS |
| GTTGTCCGGAATGTCTTAGA+TGG | 0.501841 | 8_1:+35562259 | Msa1191370:CDS |
| TTGCATCTAAATCAAGAGAA+GGG | 0.503548 | 8_1:-35562156 | None:intergenic |
| GGCTGTGGAGCAGGATTTGG+CGG | 0.503851 | 8_1:+35557104 | Msa1191370:CDS |
| CTCAAAGCTGCTAGCAGCAA+CGG | 0.505730 | 8_1:+35560352 | Msa1191370:CDS |
| GGCAACCACATTCTAGAAGA+TGG | 0.513261 | 8_1:-35559140 | None:intergenic |
| AGCAGAATCTTCTGACCTGA+TGG | 0.517733 | 8_1:-35561983 | None:intergenic |
| ACAAATGGACCCGCCGGTGG+TGG | 0.518144 | 8_1:+35560484 | Msa1191370:CDS |
| TGGCAAAGGCTGAAGGTAGT+GGG | 0.520752 | 8_1:+35559538 | Msa1191370:CDS |
| AATGTAGCACATAGCAGAGC+TGG | 0.522286 | 8_1:+35562010 | Msa1191370:CDS |
| TTCTGTCGCTGTTGCTCATG+AGG | 0.527333 | 8_1:+35557998 | Msa1191370:CDS |
| TTACAGGATTGTGGATGGAA+AGG | 0.528749 | 8_1:+35560036 | Msa1191370:intron |
| CTTGCATCTAAATCAAGAGA+AGG | 0.529568 | 8_1:-35562157 | None:intergenic |
| CATCGCATTAACTTCCATTG+AGG | 0.531661 | 8_1:-35556907 | None:intergenic |
| TGACCTGATACCGCCACCAC+CGG | 0.533151 | 8_1:-35560497 | None:intergenic |
| GTTTCTTACAGGATTGTGGA+TGG | 0.535245 | 8_1:+35560031 | Msa1191370:intron |
| ACCAATTTCCATGCAAATAG+GGG | 0.535723 | 8_1:+35555781 | Msa1191370:five_prime_UTR |
| GATAAGGTTTACATTGGCTG+TGG | 0.536128 | 8_1:+35557089 | Msa1191370:CDS |
| ATTTGCATGGAAATTGGTAT+CGG | 0.537755 | 8_1:-35555776 | None:intergenic |
| ACTTAAGAGCAGCCAAAGGC+CGG | 0.537827 | 8_1:-35557130 | None:intergenic |
| TTATTAGGTTAGATCATGGA+TGG | 0.538532 | 8_1:+35560270 | Msa1191370:intron |
| ATCTTCTGACCTGATGGAGC+AGG | 0.540709 | 8_1:-35561977 | None:intergenic |
| CTAGCTCAAGGATCTTTGGC+TGG | 0.543862 | 8_1:+35559117 | Msa1191370:CDS |
| ATGGACGGAAGGACACATCC+TGG | 0.544813 | 8_1:-35559751 | None:intergenic |
| GGTAGGTCCCATCAGGATCA+AGG | 0.547118 | 8_1:+35555815 | Msa1191370:five_prime_UTR |
| CGAAGGGATAAGGTTTACAT+TGG | 0.549338 | 8_1:+35557083 | Msa1191370:CDS |
| CTGAAATGGTCTTTCCATGC+CGG | 0.549821 | 8_1:-35562309 | None:intergenic |
| TCTAGTCCTTGAATGCTTGG+CGG | 0.553778 | 8_1:+35557181 | Msa1191370:CDS |
| GCTGGCCATCTTCTAGAATG+TGG | 0.555277 | 8_1:+35559135 | Msa1191370:CDS |
| GATATTAGGTTACGCATGGA+TGG | 0.556565 | 8_1:+35560403 | Msa1191370:CDS |
| TCGATATCAGGAGGAAAATG+TGG | 0.558482 | 8_1:-35562067 | None:intergenic |
| ATCATGTTGTCTGGTGGTGA+TGG | 0.558840 | 8_1:+35557230 | Msa1191370:CDS |
| CTCTACAACTTGATAATGGA+CGG | 0.559554 | 8_1:-35559766 | None:intergenic |
| CAAATAGGGGATAAAAGCTA+AGG | 0.562860 | 8_1:+35555794 | Msa1191370:five_prime_UTR |
| GCAGGTATGCAACTTCTACC+AGG | 0.563751 | 8_1:-35561959 | None:intergenic |
| ACAATTACTCTATGAAATTG+GGG | 0.564192 | 8_1:+35559590 | Msa1191370:CDS |
| CCTGATACCGCCACCACCGG+CGG | 0.566247 | 8_1:-35560494 | None:intergenic |
| ATGTAATTATCACATTTGGT+TGG | 0.577744 | 8_1:-35558724 | None:intergenic |
| CTGATACCGCCACCACCGGC+GGG | 0.578573 | 8_1:-35560493 | None:intergenic |
| TTTCTAAAAGTGGATCCTCT+GGG | 0.578847 | 8_1:+35557927 | Msa1191370:intron |
| TGGACAAGTGTGTGTGGCAA+AGG | 0.578883 | 8_1:+35559524 | Msa1191370:intron |
| GATTGTGGATGGAAAGGATG+GGG | 0.580255 | 8_1:+35560042 | Msa1191370:CDS |
| TCTGGCGAATCGGGTTGAAG+AGG | 0.582955 | 8_1:+35561819 | Msa1191370:CDS |
| TGAAGATATTAGGTTACGCA+TGG | 0.583995 | 8_1:+35560399 | Msa1191370:CDS |
| AAGGGTATCAGCACCTACTT+GGG | 0.587825 | 8_1:+35558668 | Msa1191370:intron |
| CGATATCAGGAGGAAAATGT+GGG | 0.592608 | 8_1:-35562066 | None:intergenic |
| GAGTTAGAGCATCTAGCTCA+AGG | 0.593140 | 8_1:+35559105 | Msa1191370:CDS |
| AAATTCTCTAGTAAATTGTA+CGG | 0.599108 | 8_1:-35560449 | None:intergenic |
| GGTGAGTACCTTGATCCTGA+TGG | 0.599114 | 8_1:-35555823 | None:intergenic |
| TCGCGAAGAATTGACCGGCA+TGG | 0.600821 | 8_1:+35562295 | Msa1191370:CDS |
| TGCATCTAAATCAAGAGAAG+GGG | 0.603094 | 8_1:-35562155 | None:intergenic |
| GGCAAAGGCTGAAGGTAGTG+GGG | 0.604566 | 8_1:+35559539 | Msa1191370:CDS |
| TGGAAATAGCTACCACACTA+GGG | 0.605065 | 8_1:+35557967 | Msa1191370:CDS |
| TCAGGAGTCACATAAGCACT+GGG | 0.606732 | 8_1:-35559615 | None:intergenic |
| GTTCCTCTTTCCAAAGCCAA+AGG | 0.613102 | 8_1:-35557720 | None:intergenic |
| ACAACTTGATAATGGACGGA+AGG | 0.613102 | 8_1:-35559762 | None:intergenic |
| AGTATATGGTCGTTAAAACC+AGG | 0.614295 | 8_1:-35560304 | None:intergenic |
| CTCAATGGAAGTTAATGCGA+TGG | 0.616174 | 8_1:+35556908 | Msa1191370:exon |
| GTGAGTACCTTGATCCTGAT+GGG | 0.617327 | 8_1:-35555822 | None:intergenic |
| ACCAGGTGAAACAAATTCTG+AGG | 0.623587 | 8_1:-35561942 | None:intergenic |
| TTATGAACTAGGTTGGAACT+GGG | 0.623764 | 8_1:+35559080 | Msa1191370:CDS |
| TTCAACCTCTCGATATCAGG+AGG | 0.628011 | 8_1:-35562076 | None:intergenic |
| ATCTCAATGGGTAAAATCAG+CGG | 0.631910 | 8_1:+35562111 | Msa1191370:CDS |
| ACTGTTCGCGAAGAATTGAC+CGG | 0.632669 | 8_1:+35562290 | Msa1191370:CDS |
| TAGGGGATAAAAGCTAAGGT+AGG | 0.633687 | 8_1:+35555798 | Msa1191370:five_prime_UTR |
| GGATTGTGGATGGAAAGGAT+GGG | 0.638291 | 8_1:+35560041 | Msa1191370:intron |
| AGAAACATCAAGCCCTAGTG+TGG | 0.638755 | 8_1:-35557979 | None:intergenic |
| TTGTATACAAATGGACCCGC+CGG | 0.638821 | 8_1:+35560478 | Msa1191370:CDS |
| ATATCTTCAGTATTCGTCTG+TGG | 0.641874 | 8_1:-35560385 | None:intergenic |
| AATAGGAGAAGCTCCCAAGT+AGG | 0.643463 | 8_1:-35558681 | None:intergenic |
| TATACAAATGGACCCGCCGG+TGG | 0.645442 | 8_1:+35560481 | Msa1191370:CDS |
| AGGTGAAACAAATTCTGAGG+AGG | 0.647632 | 8_1:-35561939 | None:intergenic |
| GTGTGTGTGGCAAAGGCTGA+AGG | 0.651349 | 8_1:+35559531 | Msa1191370:intron |
| GAAGGGGACAAATCCAGAAG+AGG | 0.652630 | 8_1:-35562139 | None:intergenic |
| GCAAAGGCTGAAGGTAGTGG+GGG | 0.669870 | 8_1:+35559540 | Msa1191370:CDS |
| TTTCGATGGACAAGTGTGTG+TGG | 0.684974 | 8_1:+35559518 | Msa1191370:intron |
| GTCCGGAATGTCTTAGATGG+TGG | 0.685418 | 8_1:+35562262 | Msa1191370:CDS |
| AGCAACTTAAGAGCAGCCAA+AGG | 0.686466 | 8_1:-35557134 | None:intergenic |
| TGGGGAGAGATATCTTATGG+AGG | 0.712179 | 8_1:+35560060 | Msa1191370:CDS |
| TATCAAATCATGTTGTCTGG+TGG | 0.722384 | 8_1:+35557224 | Msa1191370:CDS |
| AATGCGATGGAAGCACACAA+CGG | 0.745302 | 8_1:+35556921 | Msa1191370:CDS |
| CAGGAGTCACATAAGCACTG+GGG | 0.815778 | 8_1:-35559614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAAATATTTTATATGAAAA+TGG | + | chr8_1:35555719-35555738 | Msa1191370:five_prime_UTR | 10.0% |
| !! | ATATACTTTCTTATATAATT+GGG | + | chr8_1:35560320-35560339 | Msa1191370:CDS | 10.0% |
| !!! | TTTTAATTAATTGGTTTAAA+AGG | - | chr8_1:35560914-35560933 | None:intergenic | 10.0% |
| !!! | CTTTTGTTATTTTAATTAAT+TGG | - | chr8_1:35560923-35560942 | None:intergenic | 10.0% |
| !!! | TAATTTTTAGTTTTGATCAA+CGG | + | chr8_1:35556014-35556033 | Msa1191370:intron | 15.0% |
| !!! | TCAATTATTATTTCTATCAA+AGG | + | chr8_1:35556086-35556105 | Msa1191370:intron | 15.0% |
| !! | CACAAATAAGATTAATTTAA+CGG | - | chr8_1:35556289-35556308 | None:intergenic | 15.0% |
| !!! | TAAATTAATCTTATTTGTGT+CGG | + | chr8_1:35556290-35556309 | Msa1191370:intron | 15.0% |
| !! | CAAACAGATTATAAATTATA+TGG | + | chr8_1:35556585-35556604 | Msa1191370:intron | 15.0% |
| !!! | AAATATCTCTAGAAAAAAAA+TGG | - | chr8_1:35556828-35556847 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCTAGAGATATT+TGG | + | chr8_1:35556827-35556846 | Msa1191370:intron | 15.0% |
| !!! | TTTTTCCTATTAAATTCAAT+AGG | + | chr8_1:35557295-35557314 | Msa1191370:intron | 15.0% |
| !! | AAAAACCTATTGAATTTAAT+AGG | - | chr8_1:35557303-35557322 | None:intergenic | 15.0% |
| !! | AAAAATTACCAAAAAGAAAA+AGG | - | chr8_1:35558200-35558219 | None:intergenic | 15.0% |
| !! | TATTATGTTTAATAGTATTG+TGG | - | chr8_1:35558936-35558955 | None:intergenic | 15.0% |
| !! | TATTATTCATTCTCTTTATT+AGG | + | chr8_1:35560255-35560274 | Msa1191370:intron | 15.0% |
| !!! | CAATTATATAAGAAAGTATA+TGG | - | chr8_1:35560321-35560340 | None:intergenic | 15.0% |
| !! | CATATACTTTCTTATATAAT+TGG | + | chr8_1:35560319-35560338 | Msa1191370:CDS | 15.0% |
| !!! | AAATTGTTTTACTGAAAATT+TGG | - | chr8_1:35561340-35561359 | None:intergenic | 15.0% |
| !! | ATGTACCATTAAAATATATT+TGG | - | chr8_1:35561367-35561386 | None:intergenic | 15.0% |
| !!! | TAAGTTTTTTTTTCTTCCAA+AGG | - | chr8_1:35555662-35555681 | None:intergenic | 20.0% |
| !!! | AAAACTTAAAACTGTTGTTT+TGG | - | chr8_1:35555692-35555711 | None:intergenic | 20.0% |
| !! | ACTGCAAAAATAATCAAAAT+TGG | - | chr8_1:35556046-35556065 | None:intergenic | 20.0% |
| !!! | TAGAAATAATAATTGACTCA+TGG | - | chr8_1:35556082-35556101 | None:intergenic | 20.0% |
| !!! | TCTTTAATTTCTGAAAATAC+TGG | - | chr8_1:35556183-35556202 | None:intergenic | 20.0% |
| !! | AAATTAAAGAGAAACCAAAA+TGG | + | chr8_1:35556193-35556212 | Msa1191370:intron | 20.0% |
| !! | AATTAAAGAGAAACCAAAAT+GGG | + | chr8_1:35556194-35556213 | Msa1191370:intron | 20.0% |
| !! | ATAAATGAAAAGCAAAACAA+AGG | - | chr8_1:35556805-35556824 | None:intergenic | 20.0% |
| !! | ACAATTAAAAAGACAAGAAT+AGG | - | chr8_1:35556997-35557016 | None:intergenic | 20.0% |
| !!! | TTTAAATTTGTTGGACTATA+TGG | + | chr8_1:35557866-35557885 | Msa1191370:intron | 20.0% |
| !! | TCAATGAAAGAAAATAGAAT+TGG | + | chr8_1:35558315-35558334 | Msa1191370:intron | 20.0% |
| !! | AATCAAGTTAATTGATGTTA+TGG | + | chr8_1:35558515-35558534 | Msa1191370:intron | 20.0% |
| !! | AACAATTACTCTATGAAATT+GGG | + | chr8_1:35559589-35559608 | Msa1191370:CDS | 20.0% |
| !! | CTTAAAAAGAAATACAATGT+AGG | - | chr8_1:35559969-35559988 | None:intergenic | 20.0% |
| !! | AAATTCTCTAGTAAATTGTA+CGG | - | chr8_1:35560452-35560471 | None:intergenic | 20.0% |
| !! | ATTCAGTCAACAAAAAAAAA+CGG | + | chr8_1:35561015-35561034 | Msa1191370:intron | 20.0% |
| !! | TATGAATGTTGTAATATTTG+AGG | + | chr8_1:35561112-35561131 | Msa1191370:intron | 20.0% |
| !!! | TAGAGCCAAATATATTTTAA+TGG | + | chr8_1:35561359-35561378 | Msa1191370:intron | 20.0% |
| !!! | TATTTTAATGGTACATTACT+TGG | + | chr8_1:35561371-35561390 | Msa1191370:intron | 20.0% |
| ! | AAACTAACAGAATCATAATG+AGG | - | chr8_1:35555853-35555872 | None:intergenic | 25.0% |
| ! | ATATGATAATAGTTAGAGTG+AGG | - | chr8_1:35555985-35556004 | None:intergenic | 25.0% |
| ! | TCACTCTAACTATTATCATA+TGG | + | chr8_1:35555984-35556003 | Msa1191370:intron | 25.0% |
| !!! | TTTCTTTTAGGTGATGTTTT+AGG | + | chr8_1:35556750-35556769 | Msa1191370:intron | 25.0% |
| !!! | TTCTTTTAGGTGATGTTTTA+GGG | + | chr8_1:35556751-35556770 | Msa1191370:intron | 25.0% |
| ! | TCATAATTGTTTGATAAAGC+TGG | + | chr8_1:35556953-35556972 | Msa1191370:CDS | 25.0% |
| ! | TAAAAAGACAAGAATAGGAA+GGG | - | chr8_1:35556992-35557011 | None:intergenic | 25.0% |
| ! | TTAAAAAGACAAGAATAGGA+AGG | - | chr8_1:35556993-35557012 | None:intergenic | 25.0% |
| ! | CAATGTAATATCAACATAGT+TGG | - | chr8_1:35557042-35557061 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTATCGTATACT+CGG | + | chr8_1:35557577-35557596 | Msa1191370:intron | 25.0% |
| ! | AACTTGCATAATTACCAATA+TGG | + | chr8_1:35557740-35557759 | Msa1191370:CDS | 25.0% |
| ! | ACTTGCATAATTACCAATAT+GGG | + | chr8_1:35557741-35557760 | Msa1191370:CDS | 25.0% |
| !! | ATTTTTAATGCTGCATTTGA+TGG | + | chr8_1:35557775-35557794 | Msa1191370:intron | 25.0% |
| !! | TGAGTTTGGTTTAAATTTGT+TGG | + | chr8_1:35557857-35557876 | Msa1191370:intron | 25.0% |
| !! | AATGTGTAAGATGATTTTCT+CGG | + | chr8_1:35558080-35558099 | Msa1191370:intron | 25.0% |
| ! | AAAGTGAAAACAAATTTCAG+AGG | - | chr8_1:35558165-35558184 | None:intergenic | 25.0% |
| !!! | TTTTACTGTTTTTAGCTCTT+TGG | + | chr8_1:35558216-35558235 | Msa1191370:intron | 25.0% |
| ! | TAAATTGCTAATGTGTACTT+TGG | + | chr8_1:35558252-35558271 | Msa1191370:intron | 25.0% |
| !! | TAAATATATGATAACGTGAC+AGG | - | chr8_1:35558291-35558310 | None:intergenic | 25.0% |
| !!! | ATATACATTTACTGCTTTTC+AGG | + | chr8_1:35558379-35558398 | Msa1191370:intron | 25.0% |
| ! | ACCTACACAAAAATATATCA+TGG | + | chr8_1:35558414-35558433 | Msa1191370:CDS | 25.0% |
| !!! | TCCATGATATATTTTTGTGT+AGG | - | chr8_1:35558418-35558437 | None:intergenic | 25.0% |
| ! | TACACAAAAATATATCATGG+AGG | + | chr8_1:35558417-35558436 | Msa1191370:CDS | 25.0% |
| ! | ACACAAAAATATATCATGGA+GGG | + | chr8_1:35558418-35558437 | Msa1191370:CDS | 25.0% |
| ! | TTATTGACAGATAAACAAAG+AGG | - | chr8_1:35558552-35558571 | None:intergenic | 25.0% |
| !!! | ACTTTACTTTTTTGTTAAGC+TGG | + | chr8_1:35558620-35558639 | Msa1191370:intron | 25.0% |
| ! | ATGTAATTATCACATTTGGT+TGG | - | chr8_1:35558727-35558746 | None:intergenic | 25.0% |
| ! | CTTGATGTAATTATCACATT+TGG | - | chr8_1:35558731-35558750 | None:intergenic | 25.0% |
| ! | ATAACTTAAGACATATTCTG+TGG | + | chr8_1:35558890-35558909 | Msa1191370:intron | 25.0% |
| ! | AAAACTACTAAGCGAAATAT+AGG | + | chr8_1:35558967-35558986 | Msa1191370:intron | 25.0% |
| ! | GGATAAAATTCTGAATGATT+AGG | + | chr8_1:35559042-35559061 | Msa1191370:intron | 25.0% |
| !! | ACACTATCAATTTGAAGTTT+CGG | + | chr8_1:35559357-35559376 | Msa1191370:intron | 25.0% |
| ! | GAACAATTACTCTATGAAAT+TGG | + | chr8_1:35559588-35559607 | Msa1191370:CDS | 25.0% |
| ! | ACAATTACTCTATGAAATTG+GGG | + | chr8_1:35559590-35559609 | Msa1191370:CDS | 25.0% |
| ! | ATCGATGATTTATGACTAAA+GGG | + | chr8_1:35559675-35559694 | Msa1191370:intron | 25.0% |
| ! | CAATGTAGGAAAAATACAAA+AGG | - | chr8_1:35559955-35559974 | None:intergenic | 25.0% |
| ! | AATATTAATTCGTAGTAAGC+TGG | - | chr8_1:35560234-35560253 | None:intergenic | 25.0% |
| ! | GTAGCAATACTAAATTTAGA+GGG | - | chr8_1:35560527-35560546 | None:intergenic | 25.0% |
| ! | AGTAGCAATACTAAATTTAG+AGG | - | chr8_1:35560528-35560547 | None:intergenic | 25.0% |
| !! | CTGTTTGCTTGAAATTTTAT+TGG | + | chr8_1:35560546-35560565 | Msa1191370:intron | 25.0% |
| !!! | CTTAGGAGAAATTTTTTGTA+TGG | - | chr8_1:35560700-35560719 | None:intergenic | 25.0% |
| ! | CAAAAAATTTCTCCTAAGTT+TGG | + | chr8_1:35560702-35560721 | Msa1191370:intron | 25.0% |
| !!! | ATCACATGGTCTTTTTTAAA+TGG | + | chr8_1:35560813-35560832 | Msa1191370:intron | 25.0% |
| !! | GATTCTTCTAGAAAAACATT+TGG | + | chr8_1:35561205-35561224 | Msa1191370:intron | 25.0% |
| ! | AGTCATTCTTATAATGTTGA+TGG | - | chr8_1:35561408-35561427 | None:intergenic | 25.0% |
| ! | ACATTATAAGAATGACTACT+TGG | + | chr8_1:35561411-35561430 | Msa1191370:intron | 25.0% |
| ! | TAAACAATCAATGAAACATG+TGG | + | chr8_1:35561676-35561695 | Msa1191370:intron | 25.0% |
| ! | AACAAATTATCACATCTCAA+TGG | + | chr8_1:35562098-35562117 | Msa1191370:CDS | 25.0% |
| ! | ACAAATTATCACATCTCAAT+GGG | + | chr8_1:35562099-35562118 | Msa1191370:CDS | 25.0% |
| ! | CAAGAAATCAAAGAGATAAA+TGG | + | chr8_1:35562176-35562195 | Msa1191370:CDS | 25.0% |
| ! | GATAAGTGAAAATGATAAAG+TGG | + | chr8_1:35562198-35562217 | Msa1191370:CDS | 25.0% |
| !!! | CTTAAAACTGTTGTTTTGGA+AGG | - | chr8_1:35555688-35555707 | None:intergenic | 30.0% |
| ATTTGCATGGAAATTGGTAT+CGG | - | chr8_1:35555779-35555798 | None:intergenic | 30.0% | |
| ATACCAATTTCCATGCAAAT+AGG | + | chr8_1:35555779-35555798 | Msa1191370:five_prime_UTR | 30.0% | |
| TACCAATTTCCATGCAAATA+GGG | + | chr8_1:35555780-35555799 | Msa1191370:five_prime_UTR | 30.0% | |
| ACAGAATCATAATGAGGTTA+TGG | - | chr8_1:35555847-35555866 | None:intergenic | 30.0% | |
| TGAGGTGAAAATAGCAAATT+GGG | - | chr8_1:35555967-35555986 | None:intergenic | 30.0% | |
| ! | CAGTTTTACAAAACCCATTT+TGG | - | chr8_1:35556210-35556229 | None:intergenic | 30.0% |
| GTAAAACTGTTTCATAGATG+AGG | + | chr8_1:35556221-35556240 | Msa1191370:intron | 30.0% | |
| TTTCATAGATGAGGTCTTTA+AGG | + | chr8_1:35556230-35556249 | Msa1191370:intron | 30.0% | |
| !! | TCATATAAGTTGATCCAAAC+AGG | - | chr8_1:35556447-35556466 | None:intergenic | 30.0% |
| ATAACTTATGACATGTCCAT+AGG | + | chr8_1:35556519-35556538 | Msa1191370:intron | 30.0% | |
| TAGCTGATACATAAGTAGTT+TGG | + | chr8_1:35556643-35556662 | Msa1191370:intron | 30.0% | |
| ! | GCTACGAAAATGTTTCTTTT+AGG | + | chr8_1:35556738-35556757 | Msa1191370:intron | 30.0% |
| AGTTATTCATCAAAGGGATT+AGG | - | chr8_1:35556778-35556797 | None:intergenic | 30.0% | |
| !! | CAACATGATTTGATAACGTT+CGG | - | chr8_1:35557219-35557238 | None:intergenic | 30.0% |
| AATGTGTTTAAGCATTTGCA+AGG | - | chr8_1:35557349-35557368 | None:intergenic | 30.0% | |
| TATTCAGTGCTATCAATTAG+TGG | + | chr8_1:35557388-35557407 | Msa1191370:intron | 30.0% | |
| !!! | TTTTATATGCAGTTTCTAGC+TGG | + | chr8_1:35557682-35557701 | Msa1191370:intron | 30.0% |
| ! | TTTGATGGATCATGTAACAA+TGG | + | chr8_1:35557790-35557809 | Msa1191370:intron | 30.0% |
| ! | GACTCTTTTTGTAATGAGTT+TGG | + | chr8_1:35557843-35557862 | Msa1191370:intron | 30.0% |
| ! | TCATTCTTCGTTTCTAAAAG+TGG | + | chr8_1:35557917-35557936 | Msa1191370:intron | 30.0% |
| ! | GTTTTCACTTTCTGTTACAA+TGG | + | chr8_1:35558174-35558193 | Msa1191370:intron | 30.0% |
| ! | TACAATGGCCTTTTTCTTTT+TGG | + | chr8_1:35558189-35558208 | Msa1191370:intron | 30.0% |
| ACAAATAGTAGAACTTAGCA+TGG | - | chr8_1:35558359-35558378 | None:intergenic | 30.0% | |
| ACAACTGAAGGAAAATTACT+AGG | - | chr8_1:35558465-35558484 | None:intergenic | 30.0% | |
| ! | TCCTTCAGTTGTCAAATTTT+AGG | + | chr8_1:35558473-35558492 | Msa1191370:intron | 30.0% |
| ! | CCTTCAGTTGTCAAATTTTA+GGG | + | chr8_1:35558474-35558493 | Msa1191370:intron | 30.0% |
| GTTAAGCTGGATATGAAATT+TGG | + | chr8_1:35558633-35558652 | Msa1191370:intron | 30.0% | |
| !! | TTTTCAAGACAGTGAACAAT+AGG | - | chr8_1:35558701-35558720 | None:intergenic | 30.0% |
| CAGATTAGATATCATACCAT+AGG | - | chr8_1:35558782-35558801 | None:intergenic | 30.0% | |
| TTGAAAAGCAAGCAAAAGAT+GGG | - | chr8_1:35558822-35558841 | None:intergenic | 30.0% | |
| !! | ATGATTAGGTTGATATACGT+AGG | + | chr8_1:35559056-35559075 | Msa1191370:intron | 30.0% |
| TATACGTAGGTTTATGAACT+AGG | + | chr8_1:35559069-35559088 | Msa1191370:intron | 30.0% | |
| TTGAATTTAACCAGATGTGT+TGG | + | chr8_1:35559308-35559327 | Msa1191370:intron | 30.0% | |
| !!! | AGCTCTGTCTTGTTTATTTT+AGG | + | chr8_1:35559429-35559448 | Msa1191370:intron | 30.0% |
| AGTCATAAATCATCGATGTT+TGG | - | chr8_1:35559672-35559691 | None:intergenic | 30.0% | |
| CATCGATGATTTATGACTAA+AGG | + | chr8_1:35559674-35559693 | Msa1191370:intron | 30.0% | |
| AGAACTCTACAACTTGATAA+TGG | - | chr8_1:35559773-35559792 | None:intergenic | 30.0% | |
| GAGAATAAGAAATCTACCTT+TGG | - | chr8_1:35559854-35559873 | None:intergenic | 30.0% | |
| ATAATAACGAAGCATGAACA+TGG | - | chr8_1:35560160-35560179 | None:intergenic | 30.0% | |
| CTCTTTATTAGGTTAGATCA+TGG | + | chr8_1:35560266-35560285 | Msa1191370:intron | 30.0% | |
| TTATTAGGTTAGATCATGGA+TGG | + | chr8_1:35560270-35560289 | Msa1191370:intron | 30.0% | |
| AGACGAATACTGAAGATATT+AGG | + | chr8_1:35560389-35560408 | Msa1191370:CDS | 30.0% | |
| TTTACAGCGTTGTATACAAA+TGG | + | chr8_1:35560469-35560488 | Msa1191370:CDS | 30.0% | |
| CACAGATCAACTATAAAAAC+TGG | - | chr8_1:35560572-35560591 | None:intergenic | 30.0% | |
| ATAGTTGATCTGTGTTGAAT+TGG | + | chr8_1:35560578-35560597 | Msa1191370:intron | 30.0% | |
| AATTGTCAACCATATACTCT+AGG | + | chr8_1:35560625-35560644 | Msa1191370:intron | 30.0% | |
| ATTGTCAACCATATACTCTA+GGG | + | chr8_1:35560626-35560645 | Msa1191370:intron | 30.0% | |
| ATATCTAACCCTAGAGTATA+TGG | - | chr8_1:35560637-35560656 | None:intergenic | 30.0% | |
| ! | TTGTATGGACGAAACTTTTA+CGG | - | chr8_1:35560685-35560704 | None:intergenic | 30.0% |
| TTATTTCACGCTTCAAGAAT+TGG | + | chr8_1:35560733-35560752 | Msa1191370:intron | 30.0% | |
| AGCACAAAAAAAACACAGTA+GGG | - | chr8_1:35560760-35560779 | None:intergenic | 30.0% | |
| GACTGAATAAACAAAAATCC+AGG | - | chr8_1:35561003-35561022 | None:intergenic | 30.0% | |
| ACATTCATATTAGCAATTGC+AGG | - | chr8_1:35561101-35561120 | None:intergenic | 30.0% | |
| CATATGCTCAAATGTAAGAA+AGG | - | chr8_1:35561259-35561278 | None:intergenic | 30.0% | |
| TTTGAGCATATGTATGCATT+AGG | + | chr8_1:35561267-35561286 | Msa1191370:intron | 30.0% | |
| TAGGACTATACTTTATCACT+TGG | + | chr8_1:35561286-35561305 | Msa1191370:intron | 30.0% | |
| ACACAATGATTCATAGTGTT+TGG | + | chr8_1:35561435-35561454 | Msa1191370:intron | 30.0% | |
| ! | GATCAAGTACTTTATTTGAC+TGG | - | chr8_1:35561856-35561875 | None:intergenic | 30.0% |
| ! | AAATTCTGAGGAGGATTTAT+CGG | - | chr8_1:35561933-35561952 | None:intergenic | 30.0% |
| TTGCATCTAAATCAAGAGAA+GGG | - | chr8_1:35562159-35562178 | None:intergenic | 30.0% | |
| AATCGTTGAATATTGTTGTC+CGG | + | chr8_1:35562245-35562264 | Msa1191370:CDS | 30.0% | |
| GCACAATATAAGATCTGAAA+TGG | - | chr8_1:35562326-35562345 | None:intergenic | 30.0% | |
| ! | TTTTCTTCCAAAGGCTTGAA+AGG | - | chr8_1:35555653-35555672 | None:intergenic | 35.0% |
| ACCAATTTCCATGCAAATAG+GGG | + | chr8_1:35555781-35555800 | Msa1191370:five_prime_UTR | 35.0% | |
| CAAATAGGGGATAAAAGCTA+AGG | + | chr8_1:35555794-35555813 | Msa1191370:five_prime_UTR | 35.0% | |
| TGTATGTGATTCTGACCTTA+TGG | + | chr8_1:35555911-35555930 | Msa1191370:intron | 35.0% | |
| AGATAACATCATCAGCCATA+AGG | - | chr8_1:35555929-35555948 | None:intergenic | 35.0% | |
| GAGGTGAAAATAGCAAATTG+GGG | - | chr8_1:35555966-35555985 | None:intergenic | 35.0% | |
| GTGAGGTGAAAATAGCAAAT+TGG | - | chr8_1:35555968-35555987 | None:intergenic | 35.0% | |
| ! | ATTTTTGCAGTCTTCTGTAG+TGG | + | chr8_1:35556055-35556074 | Msa1191370:intron | 35.0% |
| ! | TTTTTGCAGTCTTCTGTAGT+GGG | + | chr8_1:35556056-35556075 | Msa1191370:intron | 35.0% |
| !! | GAATTGATTTGCATTCTCTC+CGG | + | chr8_1:35556252-35556271 | Msa1191370:intron | 35.0% |
| TAAGATTAATTTAACGGCCG+TGG | - | chr8_1:35556283-35556302 | None:intergenic | 35.0% | |
| ATCTATTAATGCCCGATGTT+TGG | + | chr8_1:35556317-35556336 | Msa1191370:intron | 35.0% | |
| GACACAATTGAACAAGAAGA+AGG | - | chr8_1:35556394-35556413 | None:intergenic | 35.0% | |
| TAAACACTCGTGAAACTGAA+TGG | + | chr8_1:35556482-35556501 | Msa1191370:intron | 35.0% | |
| AAACACTCGTGAAACTGAAT+GGG | + | chr8_1:35556483-35556502 | Msa1191370:intron | 35.0% | |
| AAACTGAATGGGAGAACTTA+TGG | + | chr8_1:35556494-35556513 | Msa1191370:intron | 35.0% | |
| AATAAGCTGAAAACAGCCTA+TGG | - | chr8_1:35556538-35556557 | None:intergenic | 35.0% | |
| GCTATCTTGAAGAGCTTATA+TGG | - | chr8_1:35556693-35556712 | None:intergenic | 35.0% | |
| GGTGCAAGTTATTCATCAAA+GGG | - | chr8_1:35556784-35556803 | None:intergenic | 35.0% | |
| AGGTGCAAGTTATTCATCAA+AGG | - | chr8_1:35556785-35556804 | None:intergenic | 35.0% | |
| ! | AGAGATATTTGGACAGCTTT+TGG | + | chr8_1:35556838-35556857 | Msa1191370:intron | 35.0% |
| AAGTAATCCCAAAAAGCGAA+GGG | + | chr8_1:35557067-35557086 | Msa1191370:CDS | 35.0% | |
| TTATCTAGTCCTTGAATGCT+TGG | + | chr8_1:35557178-35557197 | Msa1191370:CDS | 35.0% | |
| CGTTATCAAATCATGTTGTC+TGG | + | chr8_1:35557221-35557240 | Msa1191370:CDS | 35.0% | |
| TATCAAATCATGTTGTCTGG+TGG | + | chr8_1:35557224-35557243 | Msa1191370:CDS | 35.0% | |
| ATGGTTATGATTCTCAGAGT+AGG | + | chr8_1:35557249-35557268 | Msa1191370:intron | 35.0% | |
| ATTCTTACTAGCACCCATAT+TGG | - | chr8_1:35557757-35557776 | None:intergenic | 35.0% | |
| ! | TTTCTAAAAGTGGATCCTCT+GGG | + | chr8_1:35557927-35557946 | Msa1191370:intron | 35.0% |
| ! | GAGGTGTCTGTTACAAATTT+AGG | + | chr8_1:35558017-35558036 | Msa1191370:CDS | 35.0% |
| !! | ACACATTGCTTTTCAACCAA+AGG | - | chr8_1:35558067-35558086 | None:intergenic | 35.0% |
| !!! | ACTGTTTTTAGCTCTTTGGA+AGG | + | chr8_1:35558220-35558239 | Msa1191370:intron | 35.0% |
| !!! | ATTTACTGCTTTTCAGGTTC+AGG | + | chr8_1:35558385-35558404 | Msa1191370:intron | 35.0% |
| CCCTAAAATTTGACAACTGA+AGG | - | chr8_1:35558477-35558496 | None:intergenic | 35.0% | |
| AATTTGGCTGTAATATGCGA+AGG | + | chr8_1:35558649-35558668 | Msa1191370:intron | 35.0% | |
| ATTTGGCTGTAATATGCGAA+GGG | + | chr8_1:35558650-35558669 | Msa1191370:intron | 35.0% | |
| ! | TGCTTTATTCTTAGCACCTA+TGG | + | chr8_1:35558763-35558782 | Msa1191370:CDS | 35.0% |
| CTTGAAAAGCAAGCAAAAGA+TGG | - | chr8_1:35558823-35558842 | None:intergenic | 35.0% | |
| ! | TTTATGAACTAGGTTGGAAC+TGG | + | chr8_1:35559079-35559098 | Msa1191370:CDS | 35.0% |
| ! | TTATGAACTAGGTTGGAACT+GGG | + | chr8_1:35559080-35559099 | Msa1191370:CDS | 35.0% |
| ATATGCAATATTAGCAGACC+TGG | - | chr8_1:35559192-35559211 | None:intergenic | 35.0% | |
| TAAGTCATGTGTTGTGTGAA+TGG | + | chr8_1:35559394-35559413 | Msa1191370:intron | 35.0% | |
| AAGTCATGTGTTGTGTGAAT+GGG | + | chr8_1:35559395-35559414 | Msa1191370:intron | 35.0% | |
| ! | TCGAAACTGATTTCAGCATA+CGG | - | chr8_1:35559504-35559523 | None:intergenic | 35.0% |
| TATGCTGAAATCAGTTTCGA+TGG | + | chr8_1:35559504-35559523 | Msa1191370:intron | 35.0% | |
| CTCTTATCGTGTTCTATTAC+AGG | + | chr8_1:35559718-35559737 | Msa1191370:intron | 35.0% | |
| !! | CTCTACAACTTGATAATGGA+CGG | - | chr8_1:35559769-35559788 | None:intergenic | 35.0% |
| AAGTTGTAGAGTTCTCTGTT+CGG | + | chr8_1:35559778-35559797 | Msa1191370:CDS | 35.0% | |
| ! | TTGCTCTGAATGTTTCTTAC+AGG | + | chr8_1:35560020-35560039 | Msa1191370:intron | 35.0% |
| GAATGTTTCTTACAGGATTG+TGG | + | chr8_1:35560027-35560046 | Msa1191370:intron | 35.0% | |
| TGGATGGAAGAAATATTTCC+TGG | + | chr8_1:35560286-35560305 | Msa1191370:CDS | 35.0% | |
| AGTATATGGTCGTTAAAACC+AGG | - | chr8_1:35560307-35560326 | None:intergenic | 35.0% | |
| ATATCTTCAGTATTCGTCTG+TGG | - | chr8_1:35560388-35560407 | None:intergenic | 35.0% | |
| TGAAGATATTAGGTTACGCA+TGG | + | chr8_1:35560399-35560418 | Msa1191370:CDS | 35.0% | |
| ! | TCTAGGGTTAGATATGTTTG+TGG | + | chr8_1:35560642-35560661 | Msa1191370:intron | 35.0% |
| ATAAGTGGAGAACCAAACTT+AGG | - | chr8_1:35560717-35560736 | None:intergenic | 35.0% | |
| TTCTTGAAGCGTGAAATAAG+TGG | - | chr8_1:35560732-35560751 | None:intergenic | 35.0% | |
| CAGCACAAAAAAAACACAGT+AGG | - | chr8_1:35560761-35560780 | None:intergenic | 35.0% | |
| !! | ATGTGATCAAGCATTGACAT+GGG | - | chr8_1:35560800-35560819 | None:intergenic | 35.0% |
| AGTCAACAAAAAAAAACGGC+AGG | + | chr8_1:35561019-35561038 | Msa1191370:intron | 35.0% | |
| TTATGTCACATTTCGTGAAC+TGG | - | chr8_1:35561047-35561066 | None:intergenic | 35.0% | |
| TGAATTATCAGATTCTGCAC+TGG | + | chr8_1:35561068-35561087 | Msa1191370:intron | 35.0% | |
| GAATTATCAGATTCTGCACT+GGG | + | chr8_1:35561069-35561088 | Msa1191370:intron | 35.0% | |
| !! | TTCTGTTTTGAATGCAGTAC+TGG | + | chr8_1:35561170-35561189 | Msa1191370:intron | 35.0% |
| AATGTAAGAAAGGCCAATAG+AGG | - | chr8_1:35561249-35561268 | None:intergenic | 35.0% | |
| GAAAATTTGGAAGAGCTCAA+TGG | - | chr8_1:35561327-35561346 | None:intergenic | 35.0% | |
| ! | ATTCCTTCAATCTGAAGTGT+AGG | - | chr8_1:35561486-35561505 | None:intergenic | 35.0% |
| ATTATTACCAATGTCGTGTC+TGG | + | chr8_1:35561585-35561604 | Msa1191370:intron | 35.0% | |
| TGTACTAGTGATCTTACTGT+TGG | + | chr8_1:35561730-35561749 | Msa1191370:intron | 35.0% | |
| CTATGATGAGTCTAAAAGCA+TGG | - | chr8_1:35561764-35561783 | None:intergenic | 35.0% | |
| ! | CTTTTAGACTCATCATAGCT+AGG | + | chr8_1:35561766-35561785 | Msa1191370:intron | 35.0% |
| ATCTCAATGGGTAAAATCAG+CGG | + | chr8_1:35562111-35562130 | Msa1191370:CDS | 35.0% | |
| TGCATCTAAATCAAGAGAAG+GGG | - | chr8_1:35562158-35562177 | None:intergenic | 35.0% | |
| CTTGCATCTAAATCAAGAGA+AGG | - | chr8_1:35562160-35562179 | None:intergenic | 35.0% | |
| AGTGGAGATATACGAAGTTA+AGG | + | chr8_1:35562216-35562235 | Msa1191370:CDS | 35.0% | |
| GTGGAGATATACGAAGTTAA+GGG | + | chr8_1:35562217-35562236 | Msa1191370:CDS | 35.0% | |
| GGACAACAATATTCAACGAT+TGG | - | chr8_1:35562246-35562265 | None:intergenic | 35.0% | |
| TCCCCTATTTGCATGGAAAT+TGG | - | chr8_1:35555785-35555804 | None:intergenic | 40.0% | |
| ! | GCTTTTATCCCCTATTTGCA+TGG | - | chr8_1:35555792-35555811 | None:intergenic | 40.0% |
| TAGGGGATAAAAGCTAAGGT+AGG | + | chr8_1:35555798-35555817 | Msa1191370:five_prime_UTR | 40.0% | |
| CAGCTATCTTGAAGAGCTTA+TGG | - | chr8_1:35556562-35556581 | None:intergenic | 40.0% | |
| CATCGCATTAACTTCCATTG+AGG | - | chr8_1:35556910-35556929 | None:intergenic | 40.0% | |
| CTCAATGGAAGTTAATGCGA+TGG | + | chr8_1:35556908-35556927 | Msa1191370:exon | 40.0% | |
| GAAGTAATCCCAAAAAGCGA+AGG | + | chr8_1:35557066-35557085 | Msa1191370:CDS | 40.0% | |
| !!! | ACCTTATCCCTTCGCTTTTT+GGG | - | chr8_1:35557077-35557096 | None:intergenic | 40.0% |
| !! | AACCTTATCCCTTCGCTTTT+TGG | - | chr8_1:35557078-35557097 | None:intergenic | 40.0% |
| CGAAGGGATAAGGTTTACAT+TGG | + | chr8_1:35557083-35557102 | Msa1191370:CDS | 40.0% | |
| ! | GATAAGGTTTACATTGGCTG+TGG | + | chr8_1:35557089-35557108 | Msa1191370:CDS | 40.0% |
| GATGAATATGCTGCTACCTT+TGG | + | chr8_1:35557704-35557723 | Msa1191370:CDS | 40.0% | |
| ! | GTTTCTAAAAGTGGATCCTC+TGG | + | chr8_1:35557926-35557945 | Msa1191370:intron | 40.0% |
| TTGGAAATAGCTACCACACT+AGG | + | chr8_1:35557966-35557985 | Msa1191370:CDS | 40.0% | |
| TGGAAATAGCTACCACACTA+GGG | + | chr8_1:35557967-35557986 | Msa1191370:CDS | 40.0% | |
| TTTCCTTGCGAACTTTCCTT+TGG | + | chr8_1:35558048-35558067 | Msa1191370:intron | 40.0% | |
| TCTCGGAATGAACCTAATTC+CGG | + | chr8_1:35558097-35558116 | Msa1191370:intron | 40.0% | |
| ! | TATATGATAACGTGACAGGC+AGG | - | chr8_1:35558287-35558306 | None:intergenic | 40.0% |
| AGCAAACATTGCAGCTCTTA+TGG | - | chr8_1:35558994-35559013 | None:intergenic | 40.0% | |
| !! | TGCTTTAGTTCTCTGTAGCT+AGG | + | chr8_1:35559010-35559029 | Msa1191370:intron | 40.0% |
| TCTGTAGCTAGGTTATCTGT+TGG | + | chr8_1:35559021-35559040 | Msa1191370:intron | 40.0% | |
| CGTAGGTTTATGAACTAGGT+TGG | + | chr8_1:35559073-35559092 | Msa1191370:intron | 40.0% | |
| !! | CTAATCTAAGCTCTGAAGCA+CGG | + | chr8_1:35559222-35559241 | Msa1191370:intron | 40.0% |
| !! | TAATCTAAGCTCTGAAGCAC+GGG | + | chr8_1:35559223-35559242 | Msa1191370:intron | 40.0% |
| TAAATCCAGTAGTTGCTGGA+AGG | - | chr8_1:35559475-35559494 | None:intergenic | 40.0% | |
| GTGATAAATCCAGTAGTTGC+TGG | - | chr8_1:35559479-35559498 | None:intergenic | 40.0% | |
| !! | ATTACAGGTCATTGACTTCC+AGG | + | chr8_1:35559733-35559752 | Msa1191370:intron | 40.0% |
| !! | ACAACTTGATAATGGACGGA+AGG | - | chr8_1:35559765-35559784 | None:intergenic | 40.0% |
| AGTTGTAGAGTTCTCTGTTC+GGG | + | chr8_1:35559779-35559798 | Msa1191370:CDS | 40.0% | |
| ACCAGTTCCAGATAAACTTC+TGG | + | chr8_1:35559820-35559839 | Msa1191370:intron | 40.0% | |
| ! | TCCAGAAGTTTATCTGGAAC+TGG | - | chr8_1:35559824-35559843 | None:intergenic | 40.0% |
| !! | TCCAGATAAACTTCTGGAGT+TGG | + | chr8_1:35559826-35559845 | Msa1191370:intron | 40.0% |
| ACCAACTCCAGAAGTTTATC+TGG | - | chr8_1:35559830-35559849 | None:intergenic | 40.0% | |
| GTTTCTTACAGGATTGTGGA+TGG | + | chr8_1:35560031-35560050 | Msa1191370:intron | 40.0% | |
| TTACAGGATTGTGGATGGAA+AGG | + | chr8_1:35560036-35560055 | Msa1191370:intron | 40.0% | |
| GGATCTACAATGGTTGCTAT+AGG | - | chr8_1:35560139-35560158 | None:intergenic | 40.0% | |
| GCATGAACATGGATCTACAA+TGG | - | chr8_1:35560149-35560168 | None:intergenic | 40.0% | |
| GATATTAGGTTACGCATGGA+TGG | + | chr8_1:35560403-35560422 | Msa1191370:CDS | 40.0% | |
| ! | TTTACGGCGTGTGTTTTGTA+GGG | - | chr8_1:35560669-35560688 | None:intergenic | 40.0% |
| ! | TTTTACGGCGTGTGTTTTGT+AGG | - | chr8_1:35560670-35560689 | None:intergenic | 40.0% |
| !! | CATGTGATCAAGCATTGACA+TGG | - | chr8_1:35560801-35560820 | None:intergenic | 40.0% |
| CATGTCAATGCTTGATCACA+TGG | + | chr8_1:35560799-35560818 | Msa1191370:intron | 40.0% | |
| TAAATGGTGTAGCGTTCATG+TGG | + | chr8_1:35560829-35560848 | Msa1191370:intron | 40.0% | |
| CAAAAGAAAGTCCTAACTCG+TGG | + | chr8_1:35560937-35560956 | Msa1191370:intron | 40.0% | |
| AAGAAAGGCCAATAGAGGAA+GGG | - | chr8_1:35561244-35561263 | None:intergenic | 40.0% | |
| TAAGAAAGGCCAATAGAGGA+AGG | - | chr8_1:35561245-35561264 | None:intergenic | 40.0% | |
| ! | TGAAGTGTAGGTGCTACATA+GGG | - | chr8_1:35561474-35561493 | None:intergenic | 40.0% |
| GGATCATTTCCCATGAAGTA+CGG | - | chr8_1:35561626-35561645 | None:intergenic | 40.0% | |
| TCATAGCTAGGTTCTTCTTC+AGG | + | chr8_1:35561778-35561797 | Msa1191370:intron | 40.0% | |
| !! | TGAGGAGGATTTATCGGTTT+CGG | - | chr8_1:35561927-35561946 | None:intergenic | 40.0% |
| ! | AGGTGAAACAAATTCTGAGG+AGG | - | chr8_1:35561942-35561961 | None:intergenic | 40.0% |
| ! | TCCTCAGAATTTGTTTCACC+TGG | + | chr8_1:35561941-35561960 | Msa1191370:CDS | 40.0% |
| ACCAGGTGAAACAAATTCTG+AGG | - | chr8_1:35561945-35561964 | None:intergenic | 40.0% | |
| CGATATCAGGAGGAAAATGT+GGG | - | chr8_1:35562069-35562088 | None:intergenic | 40.0% | |
| TCGATATCAGGAGGAAAATG+TGG | - | chr8_1:35562070-35562089 | None:intergenic | 40.0% | |
| ! | ATTTTCCTCCTGATATCGAG+AGG | + | chr8_1:35562071-35562090 | Msa1191370:CDS | 40.0% |
| TGTTTCAACCTCTCGATATC+AGG | - | chr8_1:35562082-35562101 | None:intergenic | 40.0% | |
| GTGAGTACCTTGATCCTGAT+GGG | - | chr8_1:35555825-35555844 | None:intergenic | 45.0% | |
| ATTAATGCCCGATGTTTGGC+TGG | + | chr8_1:35556321-35556340 | Msa1191370:intron | 45.0% | |
| ! | CAACCGATTTCAATCCTCTG+CGG | - | chr8_1:35556352-35556371 | None:intergenic | 45.0% |
| AAACCAACTCAGAGCCTGTT+TGG | + | chr8_1:35556430-35556449 | Msa1191370:intron | 45.0% | |
| ! | AATGCGATGGAAGCACACAA+CGG | + | chr8_1:35556921-35556940 | Msa1191370:CDS | 45.0% |
| TCCCAAAAAGCGAAGGGATA+AGG | + | chr8_1:35557073-35557092 | Msa1191370:CDS | 45.0% | |
| AGCAACTTAAGAGCAGCCAA+AGG | - | chr8_1:35557137-35557156 | None:intergenic | 45.0% | |
| TCTAGTCCTTGAATGCTTGG+CGG | + | chr8_1:35557181-35557200 | Msa1191370:CDS | 45.0% | |
| ! | ATCATGTTGTCTGGTGGTGA+TGG | + | chr8_1:35557230-35557249 | Msa1191370:CDS | 45.0% |
| TCGCGATTGGTGGAAAATAG+TGG | - | chr8_1:35557539-35557558 | None:intergenic | 45.0% | |
| TCAGTGTTGTCAATCGCGAT+TGG | - | chr8_1:35557552-35557571 | None:intergenic | 45.0% | |
| AACAGAAAGTCTTGCCTGCA+AGG | - | chr8_1:35557609-35557628 | None:intergenic | 45.0% | |
| ! | TATGCTGCTACCTTTGGCTT+TGG | + | chr8_1:35557710-35557729 | Msa1191370:CDS | 45.0% |
| !! | CTACCTTTGGCTTTGGAAAG+AGG | + | chr8_1:35557717-35557736 | Msa1191370:CDS | 45.0% |
| GTTCCTCTTTCCAAAGCCAA+AGG | - | chr8_1:35557723-35557742 | None:intergenic | 45.0% | |
| AGAAACATCAAGCCCTAGTG+TGG | - | chr8_1:35557982-35558001 | None:intergenic | 45.0% | |
| CAACCAAAGGAAAGTTCGCA+AGG | - | chr8_1:35558054-35558073 | None:intergenic | 45.0% | |
| CTCGGAATGAACCTAATTCC+GGG | + | chr8_1:35558098-35558117 | Msa1191370:intron | 45.0% | |
| TCGGAATGAACCTAATTCCG+GGG | + | chr8_1:35558099-35558118 | Msa1191370:intron | 45.0% | |
| AATGAACCTAATTCCGGGGA+GGG | + | chr8_1:35558103-35558122 | Msa1191370:intron | 45.0% | |
| !! | AAGGGTATCAGCACCTACTT+GGG | + | chr8_1:35558668-35558687 | Msa1191370:intron | 45.0% |
| AATAGGAGAAGCTCCCAAGT+AGG | - | chr8_1:35558684-35558703 | None:intergenic | 45.0% | |
| ! | GAGTTAGAGCATCTAGCTCA+AGG | + | chr8_1:35559105-35559124 | Msa1191370:CDS | 45.0% |
| ! | GCATCTAGCTCAAGGATCTT+TGG | + | chr8_1:35559113-35559132 | Msa1191370:CDS | 45.0% |
| ! | GGCAACCACATTCTAGAAGA+TGG | - | chr8_1:35559143-35559162 | None:intergenic | 45.0% |
| AATGTGGTTGCCAACTCACA+GGG | + | chr8_1:35559151-35559170 | Msa1191370:intron | 45.0% | |
| TGAAATATCCCCCTGTGAGT+TGG | - | chr8_1:35559164-35559183 | None:intergenic | 45.0% | |
| TGAAGCACGGGCACAAATAT+TGG | + | chr8_1:35559235-35559254 | Msa1191370:intron | 45.0% | |
| GTATCTGACACCAACACATC+TGG | - | chr8_1:35559321-35559340 | None:intergenic | 45.0% | |
| !! | TGTTGGTGTCAGATACCAGT+CGG | + | chr8_1:35559325-35559344 | Msa1191370:intron | 45.0% |
| GTTGCTGGAAGGACATATCT+CGG | - | chr8_1:35559464-35559483 | None:intergenic | 45.0% | |
| TATGTCCTTCCAGCAACTAC+TGG | + | chr8_1:35559467-35559486 | Msa1191370:intron | 45.0% | |
| TTTCGATGGACAAGTGTGTG+TGG | + | chr8_1:35559518-35559537 | Msa1191370:intron | 45.0% | |
| TCAGGAGTCACATAAGCACT+GGG | - | chr8_1:35559618-35559637 | None:intergenic | 45.0% | |
| ATCAGGAGTCACATAAGCAC+TGG | - | chr8_1:35559619-35559638 | None:intergenic | 45.0% | |
| !! | ACTTCTGGAGTTGGTTCCAA+AGG | + | chr8_1:35559835-35559854 | Msa1191370:intron | 45.0% |
| AGGATTGTGGATGGAAAGGA+TGG | + | chr8_1:35560040-35560059 | Msa1191370:intron | 45.0% | |
| GGATTGTGGATGGAAAGGAT+GGG | + | chr8_1:35560041-35560060 | Msa1191370:intron | 45.0% | |
| GATTGTGGATGGAAAGGATG+GGG | + | chr8_1:35560042-35560061 | Msa1191370:CDS | 45.0% | |
| GGATGGGGAGAGATATCTTA+TGG | + | chr8_1:35560057-35560076 | Msa1191370:CDS | 45.0% | |
| TGGGGAGAGATATCTTATGG+AGG | + | chr8_1:35560060-35560079 | Msa1191370:CDS | 45.0% | |
| !! | TGGATGGACTTTTTGAGCAG+AGG | + | chr8_1:35560419-35560438 | Msa1191370:CDS | 45.0% |
| !! | GGATGGACTTTTTGAGCAGA+GGG | + | chr8_1:35560420-35560439 | Msa1191370:CDS | 45.0% |
| TTGTATACAAATGGACCCGC+CGG | + | chr8_1:35560478-35560497 | Msa1191370:CDS | 45.0% | |
| AGAAAGTCCTAACTCGTGGA+TGG | + | chr8_1:35560941-35560960 | Msa1191370:intron | 45.0% | |
| !! | TCATGTGACAAGTATCGACC+TGG | + | chr8_1:35560982-35561001 | Msa1191370:intron | 45.0% |
| ACGATGTCACTAACAGAACG+CGG | - | chr8_1:35561151-35561170 | None:intergenic | 45.0% | |
| TCTTCTTCCCCTTCCTCTAT+TGG | + | chr8_1:35561233-35561252 | Msa1191370:intron | 45.0% | |
| AGAAAGGCCAATAGAGGAAG+GGG | - | chr8_1:35561243-35561262 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTAGGTGCTACAT+AGG | - | chr8_1:35561475-35561494 | None:intergenic | 45.0% |
| GCACCTACACTTCAGATTGA+AGG | + | chr8_1:35561480-35561499 | Msa1191370:intron | 45.0% | |
| TGTCAGTGTCGTGTCTTTCT+TGG | - | chr8_1:35561528-35561547 | None:intergenic | 45.0% | |
| AGACACGACACTGACATATG+TGG | + | chr8_1:35561532-35561551 | Msa1191370:intron | 45.0% | |
| ATGAAGTACGGACAGACACA+TGG | - | chr8_1:35561614-35561633 | None:intergenic | 45.0% | |
| ATGTGTCTGTCCGTACTTCA+TGG | + | chr8_1:35561613-35561632 | Msa1191370:intron | 45.0% | |
| TGTGTCTGTCCGTACTTCAT+GGG | + | chr8_1:35561614-35561633 | Msa1191370:intron | 45.0% | |
| TCCTTCTGAACTGCTGCAAT+TGG | + | chr8_1:35561643-35561662 | Msa1191370:intron | 45.0% | |
| TCCAATTGCAGCAGTTCAGA+AGG | - | chr8_1:35561647-35561666 | None:intergenic | 45.0% | |
| ! | GCTAGGTTCTTCTTCAGGTT+AGG | + | chr8_1:35561783-35561802 | Msa1191370:intron | 45.0% |
| ! | TTAGGCGTGAAGACGTTTTC+TGG | + | chr8_1:35561801-35561820 | Msa1191370:intron | 45.0% |
| !! | GAAGACGTTTTCTGGCGAAT+CGG | + | chr8_1:35561809-35561828 | Msa1191370:CDS | 45.0% |
| !! | AAGACGTTTTCTGGCGAATC+GGG | + | chr8_1:35561810-35561829 | Msa1191370:CDS | 45.0% |
| AGCAGAATCTTCTGACCTGA+TGG | - | chr8_1:35561986-35562005 | None:intergenic | 45.0% | |
| AATGTAGCACATAGCAGAGC+TGG | + | chr8_1:35562010-35562029 | Msa1191370:CDS | 45.0% | |
| ACATAGCAGAGCTGGAGATA+AGG | + | chr8_1:35562018-35562037 | Msa1191370:CDS | 45.0% | |
| CATAGCAGAGCTGGAGATAA+GGG | + | chr8_1:35562019-35562038 | Msa1191370:CDS | 45.0% | |
| TTCAACCTCTCGATATCAGG+AGG | - | chr8_1:35562079-35562098 | None:intergenic | 45.0% | |
| GTTGTCCGGAATGTCTTAGA+TGG | + | chr8_1:35562259-35562278 | Msa1191370:CDS | 45.0% | |
| ! | CACCACCATCTAAGACATTC+CGG | - | chr8_1:35562267-35562286 | None:intergenic | 45.0% |
| ACTGTTCGCGAAGAATTGAC+CGG | + | chr8_1:35562290-35562309 | Msa1191370:CDS | 45.0% | |
| CTGAAATGGTCTTTCCATGC+CGG | - | chr8_1:35562312-35562331 | None:intergenic | 45.0% | |
| AAGCTAAGGTAGGTCCCATC+AGG | + | chr8_1:35555808-35555827 | Msa1191370:five_prime_UTR | 50.0% | |
| GGTGAGTACCTTGATCCTGA+TGG | - | chr8_1:35555826-35555845 | None:intergenic | 50.0% | |
| CATTCTCTCCGGTCAATCCA+CGG | + | chr8_1:35556263-35556282 | Msa1191370:intron | 50.0% | |
| ! | TTTAACGGCCGTGGATTGAC+CGG | - | chr8_1:35556274-35556293 | None:intergenic | 50.0% |
| TGGCCGCAGAGGATTGAAAT+CGG | + | chr8_1:35556346-35556365 | Msa1191370:intron | 50.0% | |
| CGCAGAGGATTGAAATCGGT+TGG | + | chr8_1:35556350-35556369 | Msa1191370:intron | 50.0% | |
| !! | GATCCAAACAGGCTCTGAGT+TGG | - | chr8_1:35556436-35556455 | None:intergenic | 50.0% |
| ! | TTTTCCTAGCAGCGCCTCAA+TGG | + | chr8_1:35556893-35556912 | Msa1191370:intron | 50.0% |
| ! | GTTTACATTGGCTGTGGAGC+AGG | + | chr8_1:35557095-35557114 | Msa1191370:CDS | 50.0% |
| ATTGGCTGTGGAGCAGGATT+TGG | + | chr8_1:35557101-35557120 | Msa1191370:CDS | 50.0% | |
| ACTTAAGAGCAGCCAAAGGC+CGG | - | chr8_1:35557133-35557152 | None:intergenic | 50.0% | |
| GTGTTGTCAATCGCGATTGG+TGG | - | chr8_1:35557549-35557568 | None:intergenic | 50.0% | |
| !! | ATACTCGGTGTTAGCCTTGC+AGG | + | chr8_1:35557592-35557611 | Msa1191370:intron | 50.0% |
| TCCTCTGGGTGCTCAACAAA+AGG | + | chr8_1:35557941-35557960 | Msa1191370:CDS | 50.0% | |
| ! | ACCTTTTGTTGAGCACCCAG+AGG | - | chr8_1:35557945-35557964 | None:intergenic | 50.0% |
| GGGTGCTCAACAAAAGGTCT+TGG | + | chr8_1:35557947-35557966 | Msa1191370:CDS | 50.0% | |
| TTCTGTCGCTGTTGCTCATG+AGG | + | chr8_1:35557998-35558017 | Msa1191370:CDS | 50.0% | |
| GAATGAACCTAATTCCGGGG+AGG | + | chr8_1:35558102-35558121 | Msa1191370:intron | 50.0% | |
| ATGAACCTAATTCCGGGGAG+GGG | + | chr8_1:35558104-35558123 | Msa1191370:intron | 50.0% | |
| !! | GAAGGGTATCAGCACCTACT+TGG | + | chr8_1:35558667-35558686 | Msa1191370:intron | 50.0% |
| CTAGCTCAAGGATCTTTGGC+TGG | + | chr8_1:35559117-35559136 | Msa1191370:CDS | 50.0% | |
| !! | GCTGGCCATCTTCTAGAATG+TGG | + | chr8_1:35559135-35559154 | Msa1191370:CDS | 50.0% |
| GAATGTGGTTGCCAACTCAC+AGG | + | chr8_1:35559150-35559169 | Msa1191370:intron | 50.0% | |
| ATGTGGTTGCCAACTCACAG+GGG | + | chr8_1:35559152-35559171 | Msa1191370:intron | 50.0% | |
| GGGGGATATTTCATGCATCC+AGG | + | chr8_1:35559171-35559190 | Msa1191370:intron | 50.0% | |
| GTCAGATACCAGTCGGACAA+CGG | + | chr8_1:35559332-35559351 | Msa1191370:intron | 50.0% | |
| TGGACAAGTGTGTGTGGCAA+AGG | + | chr8_1:35559524-35559543 | Msa1191370:intron | 50.0% | |
| TGGCAAAGGCTGAAGGTAGT+GGG | + | chr8_1:35559538-35559557 | Msa1191370:CDS | 50.0% | |
| ! | CAGGAGTCACATAAGCACTG+GGG | - | chr8_1:35559617-35559636 | None:intergenic | 50.0% |
| CTCAAAGCTGCTAGCAGCAA+CGG | + | chr8_1:35560352-35560371 | Msa1191370:CDS | 50.0% | |
| TAGTGTGCCATCCACGAGTT+AGG | - | chr8_1:35560951-35560970 | None:intergenic | 50.0% | |
| CAGAACGCGGGAGTAATACA+TGG | - | chr8_1:35561138-35561157 | None:intergenic | 50.0% | |
| CGATGTCACTAACAGAACGC+GGG | - | chr8_1:35561150-35561169 | None:intergenic | 50.0% | |
| ATGGACACCAGACACGACAT+TGG | - | chr8_1:35561595-35561614 | None:intergenic | 50.0% | |
| GCAGGTATGCAACTTCTACC+AGG | - | chr8_1:35561962-35561981 | None:intergenic | 50.0% | |
| AGTTGCATACCTGCTCCATC+AGG | + | chr8_1:35561968-35561987 | Msa1191370:CDS | 50.0% | |
| ATCTTCTGACCTGATGGAGC+AGG | - | chr8_1:35561980-35561999 | None:intergenic | 50.0% | |
| ATCAGCGGTTTCACCTCTTC+TGG | + | chr8_1:35562126-35562145 | Msa1191370:CDS | 50.0% | |
| GAAGGGGACAAATCCAGAAG+AGG | - | chr8_1:35562142-35562161 | None:intergenic | 50.0% | |
| GTCCGGAATGTCTTAGATGG+TGG | + | chr8_1:35562262-35562281 | Msa1191370:CDS | 50.0% | |
| GGTAGGTCCCATCAGGATCA+AGG | + | chr8_1:35555815-35555834 | Msa1191370:five_prime_UTR | 55.0% | |
| !! | ACTTCCATTGAGGCGCTGCT+AGG | - | chr8_1:35556900-35556919 | None:intergenic | 55.0% |
| TACGCTCCGCCAAGCATTCA+AGG | - | chr8_1:35557190-35557209 | None:intergenic | 55.0% | |
| TGAACCTAATTCCGGGGAGG+GGG | + | chr8_1:35558105-35558124 | Msa1191370:intron | 55.0% | |
| GTTTGTATAACCCCCCTCCC+CGG | - | chr8_1:35558119-35558138 | None:intergenic | 55.0% | |
| TGTGGTTGCCAACTCACAGG+GGG | + | chr8_1:35559153-35559172 | Msa1191370:intron | 55.0% | |
| TAGTGTGTCCGTTGTCCGAC+TGG | - | chr8_1:35559343-35559362 | None:intergenic | 55.0% | |
| GTGTGTGTGGCAAAGGCTGA+AGG | + | chr8_1:35559531-35559550 | Msa1191370:intron | 55.0% | |
| GTGGCAAAGGCTGAAGGTAG+TGG | + | chr8_1:35559537-35559556 | Msa1191370:CDS | 55.0% | |
| GGCAAAGGCTGAAGGTAGTG+GGG | + | chr8_1:35559539-35559558 | Msa1191370:CDS | 55.0% | |
| ! | GCAAAGGCTGAAGGTAGTGG+GGG | + | chr8_1:35559540-35559559 | Msa1191370:CDS | 55.0% |
| ATGGACGGAAGGACACATCC+TGG | - | chr8_1:35559754-35559773 | None:intergenic | 55.0% | |
| CGTTGCTGCTAGCAGCTTTG+AGG | - | chr8_1:35560354-35560373 | None:intergenic | 55.0% | |
| TATACAAATGGACCCGCCGG+TGG | + | chr8_1:35560481-35560500 | Msa1191370:CDS | 55.0% | |
| !! | TCTGGCGAATCGGGTTGAAG+AGG | + | chr8_1:35561819-35561838 | Msa1191370:CDS | 55.0% |
| TCGCGAAGAATTGACCGGCA+TGG | + | chr8_1:35562295-35562314 | Msa1191370:CDS | 55.0% | |
| TGCCCGATGTTTGGCTGGAG+TGG | + | chr8_1:35556326-35556345 | Msa1191370:intron | 60.0% | |
| GGCCACTCCAGCCAAACATC+GGG | - | chr8_1:35556331-35556350 | None:intergenic | 60.0% | |
| CGGCCACTCCAGCCAAACAT+CGG | - | chr8_1:35556332-35556351 | None:intergenic | 60.0% | |
| GGCTGTGGAGCAGGATTTGG+CGG | + | chr8_1:35557104-35557123 | Msa1191370:CDS | 60.0% | |
| GAGCAGGATTTGGCGGTGAC+CGG | + | chr8_1:35557111-35557130 | Msa1191370:CDS | 60.0% | |
| ATTTGGCGGTGACCGGCCTT+TGG | + | chr8_1:35557118-35557137 | Msa1191370:CDS | 60.0% | |
| GAACCTAATTCCGGGGAGGG+GGG | + | chr8_1:35558106-35558125 | Msa1191370:intron | 60.0% | |
| TAACCCCCCTCCCCGGAATT+AGG | - | chr8_1:35558112-35558131 | None:intergenic | 60.0% | |
| TGACCTGATACCGCCACCAC+CGG | - | chr8_1:35560500-35560519 | None:intergenic | 60.0% | |
| TTTGGCTGGAGTGGCCGCAG+AGG | + | chr8_1:35556335-35556354 | Msa1191370:intron | 65.0% | |
| ACAAATGGACCCGCCGGTGG+TGG | + | chr8_1:35560484-35560503 | Msa1191370:CDS | 65.0% | |
| ! | AATGGACCCGCCGGTGGTGG+CGG | + | chr8_1:35560487-35560506 | Msa1191370:CDS | 70.0% |
| CTGATACCGCCACCACCGGC+GGG | - | chr8_1:35560496-35560515 | None:intergenic | 70.0% | |
| CCTGATACCGCCACCACCGG+CGG | - | chr8_1:35560497-35560516 | None:intergenic | 70.0% | |
| !! | CCGCCGGTGGTGGCGGTATC+AGG | + | chr8_1:35560494-35560513 | Msa1191370:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 35555648 | 35562366 | 35555648 | ID=Msa1191370;Name=Msa1191370 |
| chr8_1 | mRNA | 35555648 | 35562366 | 35555648 | ID=Msa1191370-mRNA-1;Parent=Msa1191370;Name=Msa1191370-mRNA-1;_AED=0.37;_eAED=0.37;_QI=196|0.75|0.69|1|0.66|0.53|13|0|584 |
| chr8_1 | exon | 35555648 | 35555836 | 35555648 | ID=Msa1191370-mRNA-1:exon:11773;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35556905 | 35556974 | 35556905 | ID=Msa1191370-mRNA-1:exon:11774;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35557065 | 35557266 | 35557065 | ID=Msa1191370-mRNA-1:exon:11775;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35557694 | 35557768 | 35557694 | ID=Msa1191370-mRNA-1:exon:11776;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35557937 | 35558038 | 35557937 | ID=Msa1191370-mRNA-1:exon:11777;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35558401 | 35558441 | 35558401 | ID=Msa1191370-mRNA-1:exon:11778;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35558671 | 35558784 | 35558671 | ID=Msa1191370-mRNA-1:exon:11779;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35559078 | 35559156 | 35559078 | ID=Msa1191370-mRNA-1:exon:11780;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35559532 | 35559641 | 35559532 | ID=Msa1191370-mRNA-1:exon:11781;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35559740 | 35559823 | 35559740 | ID=Msa1191370-mRNA-1:exon:11782;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35560042 | 35560122 | 35560042 | ID=Msa1191370-mRNA-1:exon:11783;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35560277 | 35560515 | 35560277 | ID=Msa1191370-mRNA-1:exon:11784;Parent=Msa1191370-mRNA-1 |
| chr8_1 | exon | 35561805 | 35562366 | 35561805 | ID=Msa1191370-mRNA-1:exon:11785;Parent=Msa1191370-mRNA-1 |
| chr8_1 | five_prime_UTR | 35555648 | 35555836 | 35555648 | ID=Msa1191370-mRNA-1:five_prime_utr;Parent=Msa1191370-mRNA-1 |
| chr8_1 | five_prime_UTR | 35556905 | 35556911 | 35556905 | ID=Msa1191370-mRNA-1:five_prime_utr;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35556912 | 35556974 | 35556912 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35557065 | 35557266 | 35557065 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35557694 | 35557768 | 35557694 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35557937 | 35558038 | 35557937 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35558401 | 35558441 | 35558401 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35558671 | 35558784 | 35558671 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35559078 | 35559156 | 35559078 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35559532 | 35559641 | 35559532 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35559740 | 35559823 | 35559740 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35560042 | 35560122 | 35560042 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35560277 | 35560515 | 35560277 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| chr8_1 | CDS | 35561805 | 35562366 | 35561805 | ID=Msa1191370-mRNA-1:cds;Parent=Msa1191370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
