AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239330 MtrunA17_Chr8g0351041 96.667 60 2 0 1 60 1 60 1.12e-35 120
Msa1239330 MtrunA17_Chr7g0246431 93.333 60 4 0 1 60 1 60 1.03e-34 119
Msa1239330 MtrunA17_Chr8g0351031 95.000 60 3 0 1 60 1 60 2.04e-34 119
Msa1239330 MtrunA17_Chr4g0057151 86.667 60 8 0 1 60 1 60 1.04e-30 109
Msa1239330 MtrunA17_Chr7g0246381 74.194 62 16 0 1 62 1 62 6.03e-27 95.5
Msa1239330 MtrunA17_Chr3g0097101 55.000 100 38 2 1 94 16 114 1.26e-26 99.8
Msa1239330 MtrunA17_Chr3g0077501 75.000 60 15 0 1 60 1 60 2.79e-26 98.2
Msa1239330 MtrunA17_Chr4g0061671 71.667 60 17 0 1 60 1 60 4.86e-26 96.7
Msa1239330 MtrunA17_Chr8g0377561 74.138 58 15 0 1 58 1 58 5.79e-26 94.0
Msa1239330 MtrunA17_Chr1g0173161 69.231 65 20 0 1 65 1 65 7.14e-26 93.2
Msa1239330 MtrunA17_Chr2g0284911 77.586 58 13 0 3 60 18 75 7.21e-26 98.2
Msa1239330 MtrunA17_Chr8g0380021 77.586 58 13 0 3 60 19 76 7.25e-26 97.8
Msa1239330 MtrunA17_Chr2g0308251 71.429 63 18 0 1 63 1 63 8.19e-26 93.2
Msa1239330 MtrunA17_Chr5g0420091 70.968 62 18 0 1 62 1 62 8.37e-26 96.7
Msa1239330 MtrunA17_Chr3g0122251 74.194 62 16 0 1 62 1 62 9.14e-26 97.4
Msa1239330 MtrunA17_Chr6g0455511 74.194 62 16 0 1 62 1 62 9.28e-26 97.4
Msa1239330 MtrunA17_Chr8g0351051 76.271 59 14 0 1 59 1 59 1.56e-25 97.1
Msa1239330 MtrunA17_Chr7g0220111 73.333 60 16 0 1 60 1 60 2.00e-25 96.7
Msa1239330 MtrunA17_Chr5g0427921 67.213 61 20 0 1 61 1 61 8.49e-25 89.7
Msa1239330 MtrunA17_Chr4g0020221 75.000 60 15 0 1 60 1 60 1.07e-24 94.7
Msa1239330 MtrunA17_Chr8g0366231 71.667 60 17 0 1 60 1 60 2.89e-24 93.6
Msa1239330 MtrunA17_Chr6g0474371 55.422 83 26 1 1 83 1 72 4.18e-24 92.0
Msa1239330 MtrunA17_Chr4g0061691 72.881 59 16 0 1 59 1 59 4.53e-24 92.8
Msa1239330 MtrunA17_Chr5g0427401 61.194 67 26 0 1 67 1 67 2.62e-23 90.5
Msa1239330 MtrunA17_Chr2g0279821 70.000 60 18 0 1 60 1 60 2.78e-23 90.9
Msa1239330 MtrunA17_Chr1g0204111 70.000 60 18 0 1 60 17 76 5.65e-23 90.5
Msa1239330 MtrunA17_Chr7g0220121 65.625 64 22 0 1 64 1 64 6.59e-23 90.1
Msa1239330 MtrunA17_Chr4g0018421 67.797 59 19 0 1 59 1 59 9.73e-23 88.6
Msa1239330 MtrunA17_Chr5g0412271 56.790 81 33 1 1 79 1 81 1.57e-22 88.6
Msa1239330 MtrunA17_Chr5g0412461 56.790 81 33 1 1 79 1 81 1.61e-22 88.6
Msa1239330 MtrunA17_Chr5g0425191 57.143 70 30 0 1 70 1 70 3.07e-22 84.7
Msa1239330 MtrunA17_Chr4g0049541 68.333 60 19 0 1 60 1 60 1.38e-21 86.3
Msa1239330 MtrunA17_Chr4g0044071 57.576 66 28 0 1 66 1 66 1.43e-21 83.2
Msa1239330 MtrunA17_Chr5g0420081 65.000 60 21 0 1 60 1 60 1.73e-21 86.3
Msa1239330 MtrunA17_Chr3g0142191 66.102 59 20 0 1 59 1 59 1.74e-21 85.9
Msa1239330 MtrunA17_Chr5g0411691 63.333 60 22 0 1 60 1 60 2.73e-21 85.5
Msa1239330 MtrunA17_Chr1g0159661 57.627 59 25 0 1 59 1 59 1.00e-20 82.8
Msa1239330 MtrunA17_Chr4g0049901 65.000 60 21 0 1 60 27 86 2.11e-20 83.2
Msa1239330 MtrunA17_Chr3g0134451 62.500 64 24 0 1 64 1 64 2.27e-20 84.3
Msa1239330 MtrunA17_Chr3g0125241 59.322 59 24 0 1 59 26 84 3.20e-20 82.0
Msa1239330 MtrunA17_Chr1g0164791 60.000 60 24 0 1 60 1 60 1.64e-19 80.9
Msa1239330 MtrunA17_Chr5g0404951 59.322 59 24 0 1 59 1 59 7.12e-19 79.0
Msa1239330 MtrunA17_Chr1g0166611 71.429 49 14 0 13 61 17 65 7.14e-18 74.3
Msa1239330 MtrunA17_Chr1g0175611 55.172 58 26 0 1 58 1 58 2.16e-16 71.2
Msa1239330 MtrunA17_Chr2g0292791 60.714 56 22 0 3 58 10 65 3.34e-16 72.0
Msa1239330 MtrunA17_Chr1g0180591 53.448 58 27 0 1 58 1 58 5.72e-16 70.5
Msa1239330 MtrunA17_Chr1g0175601 55.172 58 26 0 1 58 1 58 8.91e-16 70.1
Msa1239330 MtrunA17_Chr1g0208561 47.436 78 29 1 3 80 10 75 1.01e-15 70.9
Msa1239330 MtrunA17_Chr3g0089141 57.143 56 24 0 3 58 10 65 1.03e-15 70.9
Msa1239330 MtrunA17_Chr8g0376821 55.172 58 26 0 1 58 1 58 1.49e-15 69.3
Msa1239330 MtrunA17_Chr5g0422421 48.052 77 40 0 3 79 10 86 2.95e-15 69.7
Msa1239330 MtrunA17_Chr1g0169761 55.172 58 26 0 1 58 1 58 3.15e-15 68.6
Msa1239330 MtrunA17_Chr1g0149391 50.000 66 33 0 3 68 10 75 3.56e-15 69.3
Msa1239330 MtrunA17_Chr8g0357771 49.254 67 34 0 1 67 1 67 3.59e-15 68.6
Msa1239330 MtrunA17_Chr1g0208581 46.154 78 30 1 3 80 10 75 3.64e-15 69.3
Msa1239330 MtrunA17_Chr1g0187361 54.098 61 28 0 3 63 10 70 4.07e-15 69.3
Msa1239330 MtrunA17_Chr8g0379021 55.357 56 25 0 3 58 13 68 4.16e-15 68.2
Msa1239330 MtrunA17_Chr3g0099411 57.143 56 24 0 3 58 10 65 5.04e-15 68.6
Msa1239330 MtrunA17_Chr4g0052081 50.847 59 29 0 1 59 1 59 8.88e-15 67.4
Msa1239330 MtrunA17_Chr3g0099421 48.718 78 28 1 3 80 35 100 9.30e-15 68.6
Msa1239330 MtrunA17_Chr8g0355091 57.143 56 24 0 3 58 10 65 1.00e-14 68.2
Msa1239330 MtrunA17_Chr1g0206721 57.143 56 24 0 3 58 10 65 1.01e-14 68.2
Msa1239330 MtrunA17_Chr1g0206701 57.143 56 24 0 3 58 10 65 1.06e-14 68.2
Msa1239330 MtrunA17_Chr1g0188671 57.143 56 24 0 3 58 48 103 1.91e-14 67.8
Msa1239330 MtrunA17_Chr4g0074101 51.724 58 28 0 1 58 1 58 2.03e-14 66.6
Msa1239330 MtrunA17_Chr5g0417661 51.923 52 25 0 1 52 56 107 2.18e-14 65.1
Msa1239330 MtrunA17_Chr2g0333981 53.448 58 27 0 1 58 11 68 2.44e-14 66.2
Msa1239330 MtrunA17_Chr5g0419601 57.143 56 24 0 3 58 10 65 2.81e-14 67.0
Msa1239330 MtrunA17_Chr4g0018951 66.667 45 15 0 14 58 24 68 3.13e-14 65.9
Msa1239330 MtrunA17_Chr2g0317481 55.357 56 25 0 3 58 10 65 3.49e-14 66.6
Msa1239330 MtrunA17_Chr2g0317451 55.357 56 25 0 3 58 10 65 3.67e-14 66.6
Msa1239330 MtrunA17_Chr4g0052061 49.153 59 30 0 1 59 1 59 3.87e-14 65.1
Msa1239330 MtrunA17_Chr2g0300421 53.571 56 26 0 3 58 10 65 4.85e-14 65.5
Msa1239330 MtrunA17_Chr2g0325971 46.154 78 30 1 3 80 10 75 5.62e-14 66.2
Msa1239330 MtrunA17_Chr1g0206991 53.571 56 26 0 3 58 10 65 9.75e-14 64.7
Msa1239330 MtrunA17_Chr4g0060841 53.846 52 24 0 1 52 1 52 1.31e-13 66.2
Msa1239330 MtrunA17_Chr5g0422941 53.571 56 26 0 3 58 10 65 2.79e-13 64.3
Msa1239330 MtrunA17_Chr3g0111841 54.902 51 23 0 8 58 2 52 3.75e-13 60.5
Msa1239330 MtrunA17_Chr3g0089151 50.000 56 28 0 3 58 10 65 2.82e-12 59.7
Msa1239330 MtrunA17_Chr8g0356071 46.552 58 31 0 1 58 1 58 5.24e-12 59.7
Msa1239330 MtrunA17_Chr3g0119901 50.000 56 28 0 3 58 10 65 5.69e-12 60.5
Msa1239330 MtrunA17_Chr4g0071601 55.102 49 22 0 15 63 25 73 7.44e-12 59.7
Msa1239330 MtrunA17_Chr3g0085241 50.000 56 28 0 3 58 42 97 1.41e-11 59.7
Msa1239330 MtrunA17_Chr2g0300441 50.000 54 27 0 5 58 12 65 1.73e-11 59.3
Msa1239330 MtrunA17_Chr1g0206691 56.250 48 21 0 11 58 1 48 2.21e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239330 AT2G45660.2 87.500 64 8 0 1 64 1 64 2.87e-35 119
Msa1239330 AT4G11880.2 76.250 80 12 1 1 80 1 73 2.34e-34 118
Msa1239330 AT4G11880.3 76.250 80 12 1 1 80 1 73 2.34e-34 118
Msa1239330 AT2G45660.1 87.500 64 8 0 1 64 1 64 3.02e-34 119
Msa1239330 AT4G11880.4 76.250 80 12 1 1 80 1 73 6.13e-34 118
Msa1239330 AT4G11880.1 76.250 80 12 1 1 80 1 73 6.13e-34 118
Msa1239330 AT4G22950.2 88.333 60 7 0 1 60 1 60 2.82e-33 115
Msa1239330 AT4G22950.3 88.333 60 7 0 1 60 1 60 2.90e-32 114
Msa1239330 AT4G22950.1 88.333 60 7 0 1 60 1 60 2.90e-32 114
Msa1239330 AT5G62165.17 45.714 140 51 4 1 124 1 131 4.91e-31 108
Msa1239330 AT5G62165.12 45.714 140 51 4 1 124 1 131 4.91e-31 108
Msa1239330 AT5G62165.11 45.714 140 51 4 1 124 1 131 4.91e-31 108
Msa1239330 AT5G62165.6 56.044 91 27 1 1 78 1 91 5.52e-31 108
Msa1239330 AT5G62165.9 56.044 91 27 1 1 78 1 91 5.52e-31 108
Msa1239330 AT5G62165.7 56.044 91 27 1 1 78 1 91 5.52e-31 108
Msa1239330 AT5G62165.8 56.044 91 27 1 1 78 1 91 5.52e-31 108
Msa1239330 AT5G62165.13 56.044 91 27 1 1 78 1 91 5.52e-31 108
Msa1239330 AT5G62165.14 57.955 88 24 1 1 75 1 88 1.61e-30 106
Msa1239330 AT5G62165.3 56.044 91 27 1 1 78 1 91 3.74e-30 108
Msa1239330 AT5G62165.1 56.044 91 27 1 1 78 1 91 3.74e-30 108
Msa1239330 AT5G62165.2 56.044 91 27 1 1 78 1 91 3.74e-30 108
Msa1239330 AT5G62165.10 56.044 91 27 1 1 78 1 91 3.77e-30 107
Msa1239330 AT5G62165.4 56.044 91 27 1 1 78 1 91 3.77e-30 107
Msa1239330 AT4G09960.2 76.667 60 14 0 1 60 1 60 4.35e-27 100
Msa1239330 AT4G09960.1 76.667 60 14 0 1 60 1 60 5.28e-27 100
Msa1239330 AT4G09960.6 76.667 60 14 0 1 60 2 61 5.57e-27 100
Msa1239330 AT4G09960.5 76.667 60 14 0 1 60 11 70 7.93e-27 100
Msa1239330 AT2G03710.3 48.000 100 41 1 1 89 1 100 8.13e-27 99.0
Msa1239330 AT4G09960.3 76.667 60 14 0 1 60 27 86 1.45e-26 100
Msa1239330 AT3G58780.2 56.522 92 38 2 3 94 18 107 1.90e-26 99.4
Msa1239330 AT5G51860.2 58.333 84 27 1 1 84 1 76 1.95e-26 98.6
Msa1239330 AT5G51860.1 58.333 84 27 1 1 84 1 76 2.46e-26 98.6
Msa1239330 AT1G24260.3 74.194 62 16 0 1 62 1 62 7.39e-26 97.8
Msa1239330 AT2G45650.1 77.966 59 13 0 1 59 1 59 8.26e-26 98.2
Msa1239330 AT2G03710.2 48.000 100 41 1 1 89 1 100 8.82e-26 98.2
Msa1239330 AT2G03710.1 48.000 100 41 1 1 89 1 100 8.90e-26 98.2
Msa1239330 AT1G24260.1 74.194 62 16 0 1 62 1 62 9.12e-26 97.8
Msa1239330 AT4G09960.4 76.667 60 14 0 1 60 96 155 9.24e-26 99.4
Msa1239330 AT1G24260.2 74.194 62 16 0 1 62 1 62 9.30e-26 97.8
Msa1239330 AT5G15800.1 75.000 60 15 0 1 60 1 60 9.60e-26 97.8
Msa1239330 AT5G51870.2 54.839 93 30 1 1 93 1 81 1.43e-25 95.5
Msa1239330 AT5G15800.2 75.000 60 15 0 1 60 1 60 1.53e-25 97.4
Msa1239330 AT2G42830.2 74.138 58 15 0 3 60 18 75 1.95e-25 97.1
Msa1239330 AT2G42830.1 74.138 58 15 0 3 60 18 75 1.97e-25 97.1
Msa1239330 AT3G02310.2 73.333 60 16 0 1 60 1 60 2.48e-25 95.5
Msa1239330 AT3G58780.1 74.138 58 15 0 3 60 18 75 2.82e-25 96.7
Msa1239330 AT4G18960.1 75.862 58 14 0 3 60 19 76 3.40e-25 96.7
Msa1239330 AT5G51870.5 54.839 93 30 1 1 93 24 104 3.40e-25 95.1
Msa1239330 AT3G58780.5 74.138 58 15 0 3 60 24 81 3.53e-25 96.7
Msa1239330 AT5G51870.1 73.770 61 16 0 1 61 1 61 5.49e-25 94.7
Msa1239330 AT3G58780.3 74.138 58 15 0 3 60 18 75 6.52e-25 96.3
Msa1239330 AT3G58780.4 74.138 58 15 0 3 60 18 75 6.89e-25 96.3
Msa1239330 AT3G02310.1 73.333 60 16 0 1 60 1 60 7.09e-25 95.5
Msa1239330 AT5G13790.1 76.667 60 14 0 1 60 1 60 1.50e-24 95.1
Msa1239330 AT5G13790.2 76.667 60 14 0 1 60 1 60 1.50e-24 95.1
Msa1239330 AT5G51870.4 73.770 61 16 0 1 61 1 61 1.51e-24 94.0
Msa1239330 AT5G51870.3 73.770 61 16 0 1 61 11 71 1.86e-24 94.0
Msa1239330 AT3G61120.1 72.881 59 16 0 1 59 1 59 3.07e-24 94.0
Msa1239330 AT5G60910.1 72.881 59 16 0 1 59 1 59 5.25e-24 93.2
Msa1239330 AT3G30260.1 57.500 80 23 1 1 80 1 69 5.51e-24 93.2
Msa1239330 AT3G57230.2 70.000 60 18 0 1 60 1 60 1.24e-23 89.7
Msa1239330 AT1G69120.1 50.000 96 34 2 1 96 1 82 1.64e-23 92.0
Msa1239330 AT1G69120.2 69.492 59 18 0 1 59 1 59 1.69e-23 91.7
Msa1239330 AT2G14210.1 69.355 62 19 0 1 62 1 62 1.84e-23 91.7
Msa1239330 AT2G14210.2 69.355 62 19 0 1 62 1 62 2.07e-23 91.7
Msa1239330 AT1G71692.1 67.797 59 19 0 1 59 1 59 2.14e-23 90.9
Msa1239330 AT3G57230.1 70.000 60 18 0 1 60 1 60 3.45e-23 90.9
Msa1239330 AT3G57230.4 70.000 60 18 0 1 60 1 60 3.45e-23 90.9
Msa1239330 AT2G22540.3 60.759 79 29 2 1 77 1 79 3.68e-23 90.9
Msa1239330 AT2G22540.1 60.759 79 29 2 1 77 1 79 3.68e-23 90.9
Msa1239330 AT1G26310.1 51.042 96 33 2 1 96 1 82 7.01e-23 90.5
Msa1239330 AT3G57390.3 67.797 59 19 0 1 59 1 59 1.21e-22 89.4
Msa1239330 AT4G37940.3 55.128 78 35 0 1 78 1 78 1.44e-22 87.8
Msa1239330 AT4G37940.4 68.333 60 19 0 1 60 1 60 1.55e-22 88.6
Msa1239330 AT4G37940.1 68.333 60 19 0 1 60 1 60 1.61e-22 89.0
Msa1239330 AT3G57390.1 67.797 59 19 0 1 59 1 59 2.07e-22 89.4
Msa1239330 AT4G24540.1 64.615 65 23 0 1 65 1 65 2.34e-22 88.6
Msa1239330 AT3G54340.1 61.290 62 24 0 1 62 1 62 8.32e-21 84.7
Msa1239330 AT5G23260.3 62.903 62 23 0 1 62 1 62 1.09e-20 84.3
Msa1239330 AT2G22630.1 65.000 60 21 0 1 60 1 60 1.10e-20 84.3
Msa1239330 AT2G22630.2 65.000 60 21 0 1 60 1 60 1.10e-20 84.3
Msa1239330 AT5G23260.2 62.903 62 23 0 1 62 1 62 1.27e-20 84.3
Msa1239330 AT5G23260.1 62.903 62 23 0 1 62 17 78 1.40e-20 84.7
Msa1239330 AT5G23260.4 62.903 62 23 0 1 62 17 78 1.48e-20 84.7
Msa1239330 AT2G22540.2 56.410 78 29 2 1 77 1 74 2.90e-20 83.2
Msa1239330 AT5G10140.2 66.102 59 20 0 1 59 1 59 4.67e-20 81.3
Msa1239330 AT5G10140.4 66.102 59 20 0 1 59 1 59 6.88e-20 81.3
Msa1239330 AT5G10140.1 66.102 59 20 0 1 59 1 59 8.30e-20 81.3
Msa1239330 AT5G20240.2 58.462 65 26 1 1 65 1 64 9.00e-20 80.1
Msa1239330 AT5G10140.3 66.102 59 20 0 1 59 1 59 1.16e-19 80.5
Msa1239330 AT5G20240.1 56.716 67 28 1 1 67 1 66 3.14e-19 80.1
Msa1239330 AT1G22130.1 63.793 58 21 0 1 58 1 58 1.14e-18 80.5
Msa1239330 AT1G77980.1 62.069 58 22 0 1 58 1 58 2.24e-18 79.7
Msa1239330 AT5G65070.4 58.065 62 26 0 1 62 1 62 4.14e-18 75.5
Msa1239330 AT5G65070.1 57.143 63 27 0 1 63 1 63 1.11e-17 75.9
Msa1239330 AT5G65070.2 57.143 63 27 0 1 63 1 63 2.24e-17 75.5
Msa1239330 AT5G65070.5 58.065 62 26 0 1 62 1 62 2.38e-17 75.1
Msa1239330 AT5G65050.2 57.627 59 25 0 1 59 1 59 2.59e-17 74.3
Msa1239330 AT5G65070.3 59.322 59 24 0 1 59 1 59 4.36e-17 74.7
Msa1239330 AT5G65050.1 57.627 59 25 0 1 59 1 59 6.16e-17 73.6
Msa1239330 AT5G65050.5 57.627 59 25 0 1 59 1 59 6.33e-17 73.6
Msa1239330 AT5G65050.3 57.627 59 25 0 1 59 1 59 6.79e-17 73.6
Msa1239330 AT1G77950.3 56.897 58 25 0 1 58 1 58 2.02e-16 73.2
Msa1239330 AT1G77950.2 56.897 58 25 0 1 58 1 58 2.02e-16 73.2
Msa1239330 AT1G77950.1 56.897 58 25 0 1 58 1 58 2.02e-16 73.2
Msa1239330 AT1G77950.4 56.897 58 25 0 1 58 1 58 2.02e-16 73.2
Msa1239330 AT5G65060.3 55.932 59 26 0 1 59 1 59 2.81e-16 72.0
Msa1239330 AT5G65060.1 55.932 59 26 0 1 59 1 59 3.31e-16 71.6
Msa1239330 AT5G65060.2 55.932 59 26 0 1 59 1 59 3.52e-16 71.6
Msa1239330 AT1G01530.1 51.515 66 32 0 3 68 8 73 6.48e-16 72.0
Msa1239330 AT1G31140.2 53.333 60 28 0 1 60 1 60 1.29e-15 70.5
Msa1239330 AT1G31140.1 53.333 60 28 0 1 60 1 60 1.33e-15 70.5
Msa1239330 AT4G37435.1 56.140 57 25 0 1 57 1 57 2.94e-15 68.9
Msa1239330 AT3G66656.1 51.724 58 28 0 1 58 1 58 6.30e-15 68.2
Msa1239330 AT2G34440.1 50.000 58 29 0 1 58 1 58 1.06e-14 67.4
Msa1239330 AT5G65080.3 52.381 63 30 0 1 63 8 70 1.39e-14 67.4
Msa1239330 AT4G36590.1 41.237 97 42 2 3 84 8 104 2.08e-14 67.8
Msa1239330 AT5G65080.2 54.237 59 27 0 1 59 8 66 3.61e-14 66.6
Msa1239330 AT1G18750.4 48.387 62 32 0 1 62 1 62 4.81e-14 67.8
Msa1239330 AT1G18750.1 48.387 62 32 0 1 62 1 62 5.46e-14 67.8
Msa1239330 AT1G18750.3 48.387 62 32 0 1 62 1 62 6.90e-14 67.4
Msa1239330 AT2G03060.3 53.846 52 24 0 1 52 1 52 9.12e-14 67.0
Msa1239330 AT2G03060.7 53.846 52 24 0 1 52 1 52 9.12e-14 67.0
Msa1239330 AT2G03060.1 53.846 52 24 0 1 52 1 52 9.12e-14 67.0
Msa1239330 AT2G03060.2 53.846 52 24 0 1 52 1 52 9.21e-14 67.0
Msa1239330 AT5G60440.1 55.357 56 25 0 3 58 8 63 1.41e-13 66.2
Msa1239330 AT1G69540.1 51.923 52 25 0 1 52 1 52 6.01e-13 64.7
Msa1239330 AT1G69540.2 51.923 52 25 0 1 52 1 52 6.08e-13 64.7
Msa1239330 AT1G65360.1 43.939 66 37 0 3 68 8 73 8.20e-13 63.2
Msa1239330 AT2G24840.1 41.111 90 52 1 3 91 64 153 1.01e-12 63.5
Msa1239330 AT1G72350.1 55.000 60 27 0 3 62 44 103 1.16e-12 62.8
Msa1239330 AT1G77080.5 57.627 59 25 0 1 59 1 59 1.99e-12 61.2
Msa1239330 AT1G77080.11 57.627 59 25 0 1 59 1 59 2.35e-12 61.2
Msa1239330 AT1G77080.12 57.627 59 25 0 1 59 1 59 3.60e-12 60.1
Msa1239330 AT1G77080.4 57.627 59 25 0 1 59 1 59 4.29e-12 60.8
Msa1239330 AT1G77080.2 57.627 59 25 0 1 59 1 59 6.74e-12 60.5
Msa1239330 AT1G77080.8 57.627 59 25 0 1 59 1 59 9.70e-12 60.5
Msa1239330 AT3G04100.1 35.955 89 45 1 3 91 15 91 1.19e-11 60.1
Msa1239330 AT1G47760.1 44.828 58 32 0 1 58 1 58 6.54e-11 57.4

Find 44 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGGAAAATGGGTCAATTTC+CGG 0.245887 8_2:-20947581 None:intergenic
CAAAGAAAATATATGTATAA+AGG 0.264770 8_2:-20944688 None:intergenic
TCCATTGTCTTCTCCGATCT+TGG 0.285800 8_2:-20947414 None:intergenic
TCATGATGCCTCCACCAATT+TGG 0.289507 8_2:+20947384 Msa1239330:CDS
ATCTTGGACCCGCTCCAAAT+TGG 0.331494 8_2:-20947398 None:intergenic
GTGCCTAGAATAGGAAAATA+AGG 0.334290 8_2:-20944662 None:intergenic
GAAACAGATATGCACCAAAT+TGG 0.350438 8_2:-20944717 None:intergenic
CAAAAGTTGCGGGTCGAAAC+CGG 0.380011 8_2:-20947536 None:intergenic
TAGAAAATGAATAAGAGTTA+AGG 0.399824 8_2:-20944629 None:intergenic
AAAGAAAATATATGTATAAA+GGG 0.409393 8_2:-20944687 None:intergenic
GTCAGGGAATGTGGTTTGTC+TGG 0.425594 8_2:+20947493 Msa1239330:CDS
TAAAGGGTTGTGCCTAGAAT+AGG 0.448557 8_2:-20944671 None:intergenic
GCAAGAAAAGCAATTTCAAA+AGG 0.455026 8_2:-20944739 None:intergenic
GGCGCACCGCGGAAGAGCGC+CGG 0.479054 8_2:+20947443 Msa1239330:CDS
CGCAATCCGGCGCTCTTCCG+CGG 0.482947 8_2:-20947449 None:intergenic
CGCGGAAGAGCGCCGGATTG+CGG 0.492698 8_2:+20947450 Msa1239330:CDS
AAAGCGCAAATTCCGCAATC+CGG 0.496390 8_2:-20947462 None:intergenic
GTTCCGTGGTCAAAAGTTGC+GGG 0.500654 8_2:-20947546 None:intergenic
TTGGACCCGCTCCAAATTGG+TGG 0.511517 8_2:-20947395 None:intergenic
TTTATGAATTTGCTAGCTCT+AGG 0.521973 8_2:+20945397 Msa1239330:CDS
AATTCATAAAGCGTCCCTCT+TGG 0.530716 8_2:-20945384 None:intergenic
ATAGGAAAATAAGGAAGGGA+AGG 0.533757 8_2:-20944653 None:intergenic
ATTTGGAGCGGGTCCAAGAT+CGG 0.541544 8_2:+20947401 Msa1239330:CDS
ACATTCTCAAAGAGAAGAAG+TGG 0.544843 8_2:+20945294 Msa1239330:CDS
ATCGGAGAAGACAATGGAGC+AGG 0.547157 8_2:+20947419 Msa1239330:CDS
TGCCTCCACCAATTTGGAGC+GGG 0.555647 8_2:+20947390 Msa1239330:CDS
AAAAGTTGCGGGTCGAAACC+GGG 0.556154 8_2:-20947535 None:intergenic
CTAGAATAGGAAAATAAGGA+AGG 0.556487 8_2:-20944658 None:intergenic
ACGGAACTAGTCCGTTCTGC+CGG 0.558362 8_2:+20947562 Msa1239330:CDS
TAGGAAAATAAGGAAGGGAA+GGG 0.573461 8_2:-20944652 None:intergenic
ACACAACACTGATAATTCAA+AGG 0.574514 8_2:-20945331 None:intergenic
GACCCGCTCCAAATTGGTGG+AGG 0.576563 8_2:-20947392 None:intergenic
AGTTCCGTGGTCAAAAGTTG+CGG 0.584275 8_2:-20947547 None:intergenic
TGGGTCAATTTCCGGCAGAA+CGG 0.603347 8_2:-20947573 None:intergenic
TAGAATAGGAAAATAAGGAA+GGG 0.610409 8_2:-20944657 None:intergenic
ATCAGTGTTGTGTGACGCTG+AGG 0.635442 8_2:+20945341 Msa1239330:CDS
TCCAAGATCGGAGAAGACAA+TGG 0.640459 8_2:+20947413 Msa1239330:CDS
GTATAGAGAACGCAACAAGT+AGG 0.642404 8_2:+20945265 Msa1239330:CDS
GGAGAAGACAATGGAGCAGG+TGG 0.645086 8_2:+20947422 Msa1239330:CDS
TACAGTCTGATAATCCGACC+CGG 0.646591 8_2:+20947517 Msa1239330:CDS
GGCAGAACGGACTAGTTCCG+TGG 0.649424 8_2:-20947560 None:intergenic
ATGCCTCCACCAATTTGGAG+CGG 0.658527 8_2:+20947389 Msa1239330:CDS
GTTGCGGGTCGAAACCGGGT+CGG 0.683450 8_2:-20947531 None:intergenic
ATGGAGCAGGTGGCGCACCG+CGG 0.699229 8_2:+20947432 Msa1239330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAATATATGTATAAA+GGG - chr8_2:20944690-20944709 None:intergenic 10.0%
!! AATATTAATCATTTGAAAAA+TGG - chr8_2:20946210-20946229 None:intergenic 10.0%
!! TAATATTTCATAGATATATA+AGG - chr8_2:20946926-20946945 None:intergenic 10.0%
!!! TAAGGATATTTTTATATTTT+GGG + chr8_2:20947042-20947061 Msa1239330:intron 10.0%
!!! GTTTAGTTTTTATTTTTTTA+AGG + chr8_2:20947064-20947083 Msa1239330:intron 10.0%
!! CAAAGAAAATATATGTATAA+AGG - chr8_2:20944691-20944710 None:intergenic 15.0%
!!! TATTTGATGACTAAATTAAA+TGG - chr8_2:20944853-20944872 None:intergenic 15.0%
!!! TTTTTGTTATGAATTGAAAT+AGG + chr8_2:20945113-20945132 Msa1239330:intron 15.0%
!! TGGTATAATTTATTTATCAA+GGG + chr8_2:20945485-20945504 Msa1239330:intron 15.0%
!! ATTAGATCTATTAAAAATCA+AGG - chr8_2:20945818-20945837 None:intergenic 15.0%
!!! TCCTTTTAATATTATAAACA+AGG + chr8_2:20945903-20945922 Msa1239330:intron 15.0%
!!! AATATTAATCATTTGACTTT+TGG + chr8_2:20946011-20946030 Msa1239330:intron 15.0%
!! AAAAAAAAAAAAACCTAGTT+AGG - chr8_2:20946038-20946057 None:intergenic 15.0%
!!! TATCTTTTGTTTTTGTTTAT+AGG - chr8_2:20946318-20946337 None:intergenic 15.0%
!!! ATGTTGTTAAATTTTGATTT+TGG - chr8_2:20946670-20946689 None:intergenic 15.0%
!! TTAAAATTATCTCTATTTGA+TGG - chr8_2:20946719-20946738 None:intergenic 15.0%
!!! GTAAGGATATTTTTATATTT+TGG + chr8_2:20947041-20947060 Msa1239330:intron 15.0%
!! ACACTATTAATTATTTAATG+TGG - chr8_2:20947197-20947216 None:intergenic 15.0%
!! TAGAAAATGAATAAGAGTTA+AGG - chr8_2:20944632-20944651 None:intergenic 20.0%
!!! CTTTTCTGATTAATTGATAT+AGG - chr8_2:20944777-20944796 None:intergenic 20.0%
!! AAAAGCTCTTAAATCTTTAT+AGG + chr8_2:20944792-20944811 Msa1239330:intron 20.0%
!! AAACAAGAACAACATAAATT+AGG - chr8_2:20945188-20945207 None:intergenic 20.0%
!! AGCAAAGAAAAGAAAAAAAA+TGG + chr8_2:20945218-20945237 Msa1239330:intron 20.0%
!! CTGGTATAATTTATTTATCA+AGG + chr8_2:20945484-20945503 Msa1239330:intron 20.0%
!! GAGATAACATATTTAATAGA+AGG - chr8_2:20945885-20945904 None:intergenic 20.0%
!!! GCCTTGTTTATAATATTAAA+AGG - chr8_2:20945907-20945926 None:intergenic 20.0%
!! ATTATAAACAAGGCTTAAAT+AGG + chr8_2:20945913-20945932 Msa1239330:intron 20.0%
!! AGTCAAATGATTAATATTTG+CGG - chr8_2:20946009-20946028 None:intergenic 20.0%
!!! GTTTTTTTTTTTTTTTGCTG+AGG + chr8_2:20946044-20946063 Msa1239330:intron 20.0%
!!! TTTTGTTTATAGGCTTAAAT+AGG - chr8_2:20946308-20946327 None:intergenic 20.0%
!!! TTTAAACTCTAAAGTTAATG+TGG + chr8_2:20946398-20946417 Msa1239330:intron 20.0%
!! GAAATAAATCTCACATAAAA+TGG - chr8_2:20946432-20946451 None:intergenic 20.0%
!!! GCTTTATGTACTTTTTTTAA+TGG - chr8_2:20946623-20946642 None:intergenic 20.0%
!!! TTAAATTTTGATTTTGGTCT+TGG - chr8_2:20946664-20946683 None:intergenic 20.0%
!!! TAGGATACTATTTAATTTCA+TGG - chr8_2:20946744-20946763 None:intergenic 20.0%
!! CTTAATGTAACTTAATGTTA+TGG - chr8_2:20946778-20946797 None:intergenic 20.0%
!! TAAATATTCACAGATATTGT+AGG - chr8_2:20946998-20947017 None:intergenic 20.0%
!! ATCTGTGAATATTTATACTT+TGG + chr8_2:20947003-20947022 Msa1239330:intron 20.0%
!! TCTGTGAATATTTATACTTT+GGG + chr8_2:20947004-20947023 Msa1239330:intron 20.0%
!! TATAACATATATATGATGCA+GGG + chr8_2:20947130-20947149 Msa1239330:intron 20.0%
! TAGAATAGGAAAATAAGGAA+GGG - chr8_2:20944660-20944679 None:intergenic 25.0%
!!! TTTCTTTGATTTTGCCAATT+TGG + chr8_2:20944703-20944722 Msa1239330:five_prime_UTR 25.0%
! AAATAGCTTCCTAGAAAAAA+GGG - chr8_2:20944826-20944845 None:intergenic 25.0%
! AAAATAGCTTCCTAGAAAAA+AGG - chr8_2:20944827-20944846 None:intergenic 25.0%
! GATGAAAGAAACAAAGAAAT+GGG - chr8_2:20944902-20944921 None:intergenic 25.0%
! AGGAACAAAAATTCTTAGAA+AGG - chr8_2:20944941-20944960 None:intergenic 25.0%
!! TCTAAGAATTTTTGTTCCTT+TGG + chr8_2:20944942-20944961 Msa1239330:intron 25.0%
!!! TTTTGTTCCTTTGGTTTTAT+TGG + chr8_2:20944951-20944970 Msa1239330:intron 25.0%
!!! TTTGTTCCTTTGGTTTTATT+GGG + chr8_2:20944952-20944971 Msa1239330:intron 25.0%
! TCTAGAAAGTTATGGAAAAA+TGG - chr8_2:20945019-20945038 None:intergenic 25.0%
!!! CTTTAAGATCTAGAAAGTTA+TGG - chr8_2:20945027-20945046 None:intergenic 25.0%
! CATAACTTTCTAGATCTTAA+AGG + chr8_2:20945025-20945044 Msa1239330:intron 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG - chr8_2:20945064-20945083 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG - chr8_2:20945065-20945084 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG - chr8_2:20945071-20945090 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG + chr8_2:20945080-20945099 Msa1239330:intron 25.0%
! AAAAGAAAAAAAATGGTGAG+AGG + chr8_2:20945225-20945244 Msa1239330:exon 25.0%
! AGTGTAAAGATATGTTAGTA+AGG - chr8_2:20945690-20945709 None:intergenic 25.0%
!!! TTTTTTTTTTTTTGCTGAGG+TGG + chr8_2:20946047-20946066 Msa1239330:intron 25.0%
!!! TTTTTTTTTTTTGCTGAGGT+GGG + chr8_2:20946048-20946067 Msa1239330:intron 25.0%
! GTTACTAATCAGATGTAATT+AGG + chr8_2:20946183-20946202 Msa1239330:intron 25.0%
! CAAATGATTAATATTTGCAG+TGG + chr8_2:20946215-20946234 Msa1239330:intron 25.0%
! TACGATTACAAAGATTACAA+CGG + chr8_2:20946336-20946355 Msa1239330:intron 25.0%
! AATATGTATGTCTTACATGT+TGG - chr8_2:20946454-20946473 None:intergenic 25.0%
! TGGATAAGATTTAAGAAATC+TGG - chr8_2:20946586-20946605 None:intergenic 25.0%
!!! TAATGGTTTTGTTGAGTTTA+TGG - chr8_2:20946606-20946625 None:intergenic 25.0%
! ATTATTATCTGCACTACATA+AGG + chr8_2:20946958-20946977 Msa1239330:intron 25.0%
!!! GGGTTTATTTTTTCTTAGTA+AGG + chr8_2:20947024-20947043 Msa1239330:intron 25.0%
! CTGCATCATATATATGTTAT+AGG - chr8_2:20947131-20947150 None:intergenic 25.0%
! CTATAACATATATATGATGC+AGG + chr8_2:20947129-20947148 Msa1239330:intron 25.0%
!!! TGATCACAATTTTTTTAGCA+TGG + chr8_2:20947216-20947235 Msa1239330:intron 25.0%
! TTTATGTAAAAGATAGCCTT+CGG - chr8_2:20947269-20947288 None:intergenic 25.0%
CTAGAATAGGAAAATAAGGA+AGG - chr8_2:20944661-20944680 None:intergenic 30.0%
!!! CTTCCTTATTTTCCTATTCT+AGG + chr8_2:20944659-20944678 Msa1239330:five_prime_UTR 30.0%
GCAAGAAAAGCAATTTCAAA+AGG - chr8_2:20944742-20944761 None:intergenic 30.0%
!! TTTGAAATTGCTTTTCTTGC+TGG + chr8_2:20944742-20944761 Msa1239330:five_prime_UTR 30.0%
GGATGAAAGAAACAAAGAAA+TGG - chr8_2:20944903-20944922 None:intergenic 30.0%
!! GAAAGGTGTTTGAAATATGA+AGG - chr8_2:20944924-20944943 None:intergenic 30.0%
ACACAACACTGATAATTCAA+AGG - chr8_2:20945334-20945353 None:intergenic 30.0%
! TTATTGTTTTCTCACCAAGA+GGG + chr8_2:20945370-20945389 Msa1239330:CDS 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG + chr8_2:20945397-20945416 Msa1239330:CDS 30.0%
TTGTGTGATTATATTGCATC+TGG + chr8_2:20945465-20945484 Msa1239330:intron 30.0%
AGAAGTGAGAGAAAGAAAAT+AGG + chr8_2:20945590-20945609 Msa1239330:intron 30.0%
CAAATGATTAATATTTGCGG+TGG - chr8_2:20946006-20946025 None:intergenic 30.0%
TCAAATGACCTATATTTGCA+GGG - chr8_2:20946148-20946167 None:intergenic 30.0%
TTCAAATGACCTATATTTGC+AGG - chr8_2:20946149-20946168 None:intergenic 30.0%
ACATCTGATTAGTAACTTCA+GGG - chr8_2:20946179-20946198 None:intergenic 30.0%
TACATCTGATTAGTAACTTC+AGG - chr8_2:20946180-20946199 None:intergenic 30.0%
TTCAAATAGCCTATATTTGC+AGG + chr8_2:20946273-20946292 Msa1239330:intron 30.0%
TCAAATAGCCTATATTTGCA+GGG + chr8_2:20946274-20946293 Msa1239330:intron 30.0%
ATTACACTCAACAAGAAAGA+TGG + chr8_2:20946475-20946494 Msa1239330:intron 30.0%
TTACACTCAACAAGAAAGAT+GGG + chr8_2:20946476-20946495 Msa1239330:intron 30.0%
TGTAACTTAATGTTATGGTG+TGG - chr8_2:20946773-20946792 None:intergenic 30.0%
ACATTAAGTTAAACTAGCAC+AGG + chr8_2:20946790-20946809 Msa1239330:intron 30.0%
CATACACAGTTAATTTAGAG+AGG + chr8_2:20946894-20946913 Msa1239330:intron 30.0%
ATATTCACAGATATTGTAGG+AGG - chr8_2:20946995-20947014 None:intergenic 30.0%
GATGCAGGGTTTAAAAAAAA+TGG + chr8_2:20947144-20947163 Msa1239330:intron 30.0%
TAGGAAAATAAGGAAGGGAA+GGG - chr8_2:20944655-20944674 None:intergenic 35.0%
ATAGGAAAATAAGGAAGGGA+AGG - chr8_2:20944656-20944675 None:intergenic 35.0%
GTGCCTAGAATAGGAAAATA+AGG - chr8_2:20944665-20944684 None:intergenic 35.0%
GAAACAGATATGCACCAAAT+TGG - chr8_2:20944720-20944739 None:intergenic 35.0%
!!! GTGTTTAGACCCTTTTTTCT+AGG + chr8_2:20944814-20944833 Msa1239330:intron 35.0%
TTACCACCCAATAAAACCAA+AGG - chr8_2:20944961-20944980 None:intergenic 35.0%
! TTTCATCCCTTTTCCTTACA+AGG + chr8_2:20945055-20945074 Msa1239330:intron 35.0%
AAAAAAAGTCCTCACCAAGA+AGG - chr8_2:20945097-20945116 None:intergenic 35.0%
ACATTCTCAAAGAGAAGAAG+TGG + chr8_2:20945294-20945313 Msa1239330:CDS 35.0%
! CTTATTGTTTTCTCACCAAG+AGG + chr8_2:20945369-20945388 Msa1239330:CDS 35.0%
TCAAATGGCCTATATTTGCA+GGG - chr8_2:20945947-20945966 None:intergenic 35.0%
TTCAAATGGCCTATATTTGC+AGG - chr8_2:20945948-20945967 None:intergenic 35.0%
TTCAGGGACGAAAATTCAAA+TGG - chr8_2:20946259-20946278 None:intergenic 35.0%
!! TTTGACTTTTGGTCCTAACT+AGG + chr8_2:20946022-20946041 Msa1239330:intron 35.0%
TAATATTTGCAGTGGCAGAT+TGG + chr8_2:20946223-20946242 Msa1239330:intron 35.0%
! TTGGAAGGATTAGTAACTTC+AGG + chr8_2:20946242-20946261 Msa1239330:intron 35.0%
! TGGAAGGATTAGTAACTTCA+GGG + chr8_2:20946243-20946262 Msa1239330:intron 35.0%
TATTTCGTCCCTGCAAATAT+AGG - chr8_2:20946285-20946304 None:intergenic 35.0%
TACACTCAACAAGAAAGATG+GGG + chr8_2:20946477-20946496 Msa1239330:intron 35.0%
ACTAACGTAAACACTAGTCA+CGG - chr8_2:20946547-20946566 None:intergenic 35.0%
! TAGTGTTTACGTTAGTTTCC+AGG + chr8_2:20946551-20946570 Msa1239330:intron 35.0%
! AGTGTTTACGTTAGTTTCCA+GGG + chr8_2:20946552-20946571 Msa1239330:intron 35.0%
AACTTAATGTTATGGTGTGG+AGG - chr8_2:20946770-20946789 None:intergenic 35.0%
!!! AAAGATCTCTGCTGATTTTG+TGG + chr8_2:20947167-20947186 Msa1239330:intron 35.0%
!! TTTTTAGCATGGCATGATCA+AGG + chr8_2:20947227-20947246 Msa1239330:intron 35.0%
AGTATGAACTTGCATCAAAG+TGG + chr8_2:20947294-20947313 Msa1239330:intron 35.0%
CGATCTTGACAACAATGATT+GGG - chr8_2:20947330-20947349 None:intergenic 35.0%
TAAAGGGTTGTGCCTAGAAT+AGG - chr8_2:20944674-20944693 None:intergenic 40.0%
!!! GTTCCTTTGGTTTTATTGGG+TGG + chr8_2:20944955-20944974 Msa1239330:intron 40.0%
! TGTGTTTTTCCTTCTTGGTG+AGG + chr8_2:20945085-20945104 Msa1239330:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG + chr8_2:20945265-20945284 Msa1239330:CDS 40.0%
! AATTCATAAAGCGTCCCTCT+TGG - chr8_2:20945387-20945406 None:intergenic 40.0%
! TGGGAGGATTAGTAACTTCA+GGG - chr8_2:20945978-20945997 None:intergenic 40.0%
! TTGGGAGGATTAGTAACTTC+AGG - chr8_2:20945979-20945998 None:intergenic 40.0%
AATATTTGCGGTGGCAGATT+GGG - chr8_2:20945997-20946016 None:intergenic 40.0%
TAATATTTGCGGTGGCAGAT+TGG - chr8_2:20945998-20946017 None:intergenic 40.0%
TCTTTCGTCCCTGCAAATAT+AGG + chr8_2:20946137-20946156 Msa1239330:intron 40.0%
CAGCACATCACATGTAGTTA+CGG + chr8_2:20946819-20946838 Msa1239330:intron 40.0%
TCACAAACCATAATCTCCGA+AGG + chr8_2:20947250-20947269 Msa1239330:intron 40.0%
AAGATAGCCTTCGGAGATTA+TGG - chr8_2:20947260-20947279 None:intergenic 40.0%
GCGATCTTGACAACAATGAT+TGG - chr8_2:20947331-20947350 None:intergenic 40.0%
TCGTAAGATCGTACGATCTT+GGG - chr8_2:20947363-20947382 None:intergenic 40.0%
!!! TTGCGCTTTTTTTTCACGTC+AGG + chr8_2:20947476-20947495 Msa1239330:CDS 40.0%
!!! TGCGCTTTTTTTTCACGTCA+GGG + chr8_2:20947477-20947496 Msa1239330:CDS 40.0%
!!! TTTTTTCACGTCAGGGAATG+TGG + chr8_2:20947484-20947503 Msa1239330:CDS 40.0%
TCTGTCGTCCCTGCAAATAT+AGG + chr8_2:20945936-20945955 Msa1239330:intron 45.0%
CCAATCATCACTTGCCACAT+GGG - chr8_2:20946094-20946113 None:intergenic 45.0%
CCATGTGGCAAGTGATGATT+GGG + chr8_2:20946092-20946111 Msa1239330:intron 45.0%
ATTTGCAGTGGCAGATTGGA+AGG + chr8_2:20946227-20946246 Msa1239330:intron 45.0%
GTAAACACTAGTCACGGAAG+AGG - chr8_2:20946541-20946560 None:intergenic 45.0%
! GAAATCTGGAGTTAGAACCC+TGG - chr8_2:20946572-20946591 None:intergenic 45.0%
!! TGTTATGGTGTGGAGGTACT+AGG - chr8_2:20946763-20946782 None:intergenic 45.0%
CTCGTAAGATCGTACGATCT+TGG - chr8_2:20947364-20947383 None:intergenic 45.0%
TCATGATGCCTCCACCAATT+TGG + chr8_2:20947384-20947403 Msa1239330:CDS 45.0%
TCCAAGATCGGAGAAGACAA+TGG + chr8_2:20947413-20947432 Msa1239330:CDS 45.0%
TCCATTGTCTTCTCCGATCT+TGG - chr8_2:20947417-20947436 None:intergenic 45.0%
AAAGCGCAAATTCCGCAATC+CGG - chr8_2:20947465-20947484 None:intergenic 45.0%
TACAGTCTGATAATCCGACC+CGG + chr8_2:20947517-20947536 Msa1239330:CDS 45.0%
AGTTCCGTGGTCAAAAGTTG+CGG - chr8_2:20947550-20947569 None:intergenic 45.0%
ATCAGTGTTGTGTGACGCTG+AGG + chr8_2:20945341-20945360 Msa1239330:CDS 50.0%
CCCATGTGGCAAGTGATGAT+TGG + chr8_2:20946091-20946110 Msa1239330:intron 50.0%
CCCAATCATCACTTGCCACA+TGG - chr8_2:20946095-20946114 None:intergenic 50.0%
!! GCGAGGTGGTTGGCTTAAAT+AGG + chr8_2:20946114-20946133 Msa1239330:intron 50.0%
ATGCCTCCACCAATTTGGAG+CGG + chr8_2:20947389-20947408 Msa1239330:CDS 50.0%
ATCTTGGACCCGCTCCAAAT+TGG - chr8_2:20947401-20947420 None:intergenic 50.0%
! ATTTGGAGCGGGTCCAAGAT+CGG + chr8_2:20947401-20947420 Msa1239330:CDS 50.0%
ATCGGAGAAGACAATGGAGC+AGG + chr8_2:20947419-20947438 Msa1239330:CDS 50.0%
! GTCAGGGAATGTGGTTTGTC+TGG + chr8_2:20947493-20947512 Msa1239330:CDS 50.0%
AAAAGTTGCGGGTCGAAACC+GGG - chr8_2:20947538-20947557 None:intergenic 50.0%
CAAAAGTTGCGGGTCGAAAC+CGG - chr8_2:20947539-20947558 None:intergenic 50.0%
GTTCCGTGGTCAAAAGTTGC+GGG - chr8_2:20947549-20947568 None:intergenic 50.0%
ATTTGCGGTGGCAGATTGGG+AGG - chr8_2:20945994-20946013 None:intergenic 55.0%
TGGCAAGTGATGATTGGGCG+AGG + chr8_2:20946097-20946116 Msa1239330:intron 55.0%
CAAGTGATGATTGGGCGAGG+TGG + chr8_2:20946100-20946119 Msa1239330:intron 55.0%
TGATGATTGGGCGAGGTGGT+TGG + chr8_2:20946104-20946123 Msa1239330:intron 55.0%
! TGCCTCCACCAATTTGGAGC+GGG + chr8_2:20947390-20947409 Msa1239330:CDS 55.0%
TTGGACCCGCTCCAAATTGG+TGG - chr8_2:20947398-20947417 None:intergenic 55.0%
GGAGAAGACAATGGAGCAGG+TGG + chr8_2:20947422-20947441 Msa1239330:CDS 55.0%
! CGACCCGCAACTTTTGACCA+CGG + chr8_2:20947543-20947562 Msa1239330:CDS 55.0%
ACGGAACTAGTCCGTTCTGC+CGG + chr8_2:20947562-20947581 Msa1239330:CDS 55.0%
! GTGGGCTGTCATTAGCGACG+TGG + chr8_2:20946066-20946085 Msa1239330:intron 60.0%
TTAGCGACGTGGTGCCCATG+TGG + chr8_2:20946077-20946096 Msa1239330:intron 60.0%
GACCCGCTCCAAATTGGTGG+AGG - chr8_2:20947395-20947414 None:intergenic 60.0%
!! GGCAGAACGGACTAGTTCCG+TGG - chr8_2:20947563-20947582 None:intergenic 60.0%
GTTGCGGGTCGAAACCGGGT+CGG - chr8_2:20947534-20947553 None:intergenic 65.0%
ATGGAGCAGGTGGCGCACCG+CGG + chr8_2:20947432-20947451 Msa1239330:CDS 70.0%
CGCAATCCGGCGCTCTTCCG+CGG - chr8_2:20947452-20947471 None:intergenic 70.0%
!! CGCGGAAGAGCGCCGGATTG+CGG + chr8_2:20947450-20947469 Msa1239330:CDS 70.0%
!! GGCGCACCGCGGAAGAGCGC+CGG + chr8_2:20947443-20947462 Msa1239330:CDS 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 20944606 20947591 20944606 ID=Msa1239330;Name=Msa1239330
chr8_2 mRNA 20944606 20947591 20944606 ID=Msa1239330-mRNA-1;Parent=Msa1239330;Name=Msa1239330-mRNA-1;_AED=0.41;_eAED=0.41;_QI=175|0.5|0.66|0.66|0.5|0.33|3|0|135
chr8_2 exon 20944606 20944763 20944606 ID=Msa1239330-mRNA-1:exon:7560;Parent=Msa1239330-mRNA-1
chr8_2 exon 20945220 20945418 20945220 ID=Msa1239330-mRNA-1:exon:7561;Parent=Msa1239330-mRNA-1
chr8_2 exon 20947366 20947591 20947366 ID=Msa1239330-mRNA-1:exon:7562;Parent=Msa1239330-mRNA-1
chr8_2 five_prime_UTR 20944606 20944763 20944606 ID=Msa1239330-mRNA-1:five_prime_utr;Parent=Msa1239330-mRNA-1
chr8_2 five_prime_UTR 20945220 20945236 20945220 ID=Msa1239330-mRNA-1:five_prime_utr;Parent=Msa1239330-mRNA-1
chr8_2 CDS 20945237 20945418 20945237 ID=Msa1239330-mRNA-1:cds;Parent=Msa1239330-mRNA-1
chr8_2 CDS 20947366 20947591 20947366 ID=Msa1239330-mRNA-1:cds;Parent=Msa1239330-mRNA-1
Gene Sequence

>Msa1239330

ATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGAAGAAGTGGTTTGTTGAAGAAAGCCTTTGAATTATCAGTGTTGTGTGACGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGACGCTTTATGAATTTGCTAGCTCTAGATCGTACGATCTTACGAGTCATGATGCCTCCACCAATTTGGAGCGGGTCCAAGATCGGAGAAGACAATGGAGCAGGTGGCGCACCGCGGAAGAGCGCCGGATTGCGGAATTTGCGCTTTTTTTTCACGTCAGGGAATGTGGTTTGTCTGGTTACAGTCTGATAATCCGACCCGGTTTCGACCCGCAACTTTTGACCACGGAACTAGTCCGTTCTGCCGGAAATTGA
Protein sequence

>Msa1239330

MVRGKTQMKRIENATSRQVTFSKRRSGLLKKAFELSVLCDAEVALIVFSPRGTLYEFASSRSYDLTSHDASTNLERVQDRRRQWSRWRTAEERRIAEFALFFHVRECGLSGYSLIIRPGFDPQLLTTELVRSAGN*