AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239580 MtrunA17_Chr8g0351311 80.089 447 22 4 1 380 7 453 0.0 653
Msa1239580 MtrunA17_Chr8g0351391 77.852 447 31 5 1 380 7 452 0.0 625
Msa1239580 MtrunA17_Chr1g0204271 51.951 410 131 2 37 380 38 447 1.55e-153 442
Msa1239580 MtrunA17_Chr8g0351421 41.372 452 192 6 1 380 1 451 4.89e-119 355
Msa1239580 MtrunA17_Chr8g0351461 44.068 413 159 4 39 380 39 450 1.62e-118 353
Msa1239580 MtrunA17_Chr8g0351401 45.278 413 154 6 39 380 40 451 1.04e-116 349
Msa1239580 MtrunA17_Chr8g0351441 40.576 451 196 4 1 380 1 450 2.37e-115 345
Msa1239580 MtrunA17_Chr1g0204241 48.750 240 86 4 178 381 1 239 1.19e-75 236
Msa1239580 MtrunA17_Chr8g0357111 54.268 164 75 0 39 202 39 202 7.89e-60 192
Msa1239580 MtrunA17_Chr5g0403441 39.442 251 151 1 17 267 22 271 8.15e-60 196
Msa1239580 MtrunA17_Chr4g0067191 39.442 251 151 1 17 267 7 256 1.15e-58 198
Msa1239580 MtrunA17_Chr4g0067191 44.762 105 40 2 293 380 354 457 1.75e-23 102
Msa1239580 MtrunA17_Chr7g0260831 30.529 416 226 10 27 380 28 442 4.33e-57 194
Msa1239580 MtrunA17_Chr7g0255131 30.201 447 237 15 9 380 3 449 7.21e-56 191
Msa1239580 MtrunA17_Chr4g0038271 32.090 402 192 11 57 379 102 501 9.74e-56 192
Msa1239580 MtrunA17_Chr1g0184421 33.092 414 207 13 33 380 35 444 2.40e-55 189
Msa1239580 MtrunA17_Chr4g0026941 33.007 409 177 12 54 380 87 480 1.55e-53 185
Msa1239580 MtrunA17_Chr3g0119681 30.549 419 210 11 41 380 43 459 1.32e-52 182
Msa1239580 MtrunA17_Chr7g0260821 28.904 429 217 11 27 380 28 443 1.56e-51 179
Msa1239580 MtrunA17_Chr8g0348751 28.873 426 213 10 39 379 31 451 5.98e-51 178
Msa1239580 MtrunA17_Chr1g0164321 30.324 432 209 12 38 379 59 488 7.15e-51 179
Msa1239580 MtrunA17_Chr1g0184461 31.106 434 226 14 18 380 13 444 3.22e-50 176
Msa1239580 MtrunA17_Chr8g0387001 28.846 416 215 12 42 379 34 446 2.84e-49 174
Msa1239580 MtrunA17_Chr3g0104351 29.216 421 217 11 39 379 38 457 6.56e-48 170
Msa1239580 MtrunA17_Chr2g0321171 31.202 391 203 9 49 380 56 439 9.31e-47 166
Msa1239580 MtrunA17_Chr1g0178971 31.620 389 202 12 53 380 65 450 9.95e-46 164
Msa1239580 MtrunA17_Chr5g0429651 28.979 421 216 11 39 379 32 449 2.06e-45 163
Msa1239580 MtrunA17_Chr7g0225531 28.049 410 223 11 41 380 46 453 1.87e-40 149
Msa1239580 MtrunA17_Chr1g0163491 25.991 454 244 15 9 379 18 462 5.75e-39 145
Msa1239580 MtrunA17_Chr1g0171041 26.126 444 247 12 16 379 6 448 8.42e-39 145
Msa1239580 MtrunA17_Chr8g0380501 26.147 436 236 14 18 379 9 432 4.25e-37 140
Msa1239580 MtrunA17_Chr4g0004481 26.622 447 236 15 9 379 3 433 6.57e-37 139
Msa1239580 MtrunA17_Chr7g0214931 29.189 370 179 11 57 348 75 439 1.83e-36 137
Msa1239580 MtrunA17_Chr1g0163281 25.359 418 223 13 42 379 52 460 1.47e-35 136
Msa1239580 MtrunA17_Chr1g0163431 26.882 372 193 11 81 379 40 405 2.12e-35 134
Msa1239580 MtrunA17_Chr1g0184471 28.283 396 204 12 21 356 16 391 5.39e-35 132
Msa1239580 MtrunA17_Chr7g0227291 24.598 435 246 12 19 379 9 435 6.60e-35 134
Msa1239580 MtrunA17_Chr1g0163391 25.301 415 228 13 42 379 34 443 7.92e-35 134
Msa1239580 MtrunA17_Chr1g0163501 26.506 415 222 13 42 379 32 440 2.79e-34 132
Msa1239580 MtrunA17_Chr6g0449361 23.150 419 232 12 41 379 36 444 4.15e-33 129
Msa1239580 MtrunA17_Chr7g0227281 24.256 437 242 15 18 379 13 435 6.97e-33 128
Msa1239580 MtrunA17_Chr1g0163461 25.000 420 227 14 42 379 47 460 8.95e-33 128
Msa1239580 MtrunA17_Chr1g0164351 27.647 340 181 10 57 332 84 422 1.67e-32 126
Msa1239580 MtrunA17_Chr1g0163511 25.175 429 221 16 42 379 41 460 1.13e-31 125
Msa1239580 MtrunA17_Chr6g0449381 21.446 415 237 12 45 379 41 446 2.42e-31 124
Msa1239580 MtrunA17_Chr1g0163451 23.736 455 254 16 9 379 20 465 4.89e-31 124
Msa1239580 MtrunA17_Chr6g0449341 23.769 467 257 16 1 379 49 504 2.18e-30 122
Msa1239580 MtrunA17_Chr1g0163421 23.297 455 256 16 9 379 36 481 1.72e-29 119
Msa1239580 MtrunA17_Chr6g0449351 22.113 407 227 13 53 379 8 404 1.39e-28 116
Msa1239580 MtrunA17_Chr1g0163211 24.057 424 217 14 42 379 38 442 1.43e-28 116
Msa1239580 MtrunA17_Chr1g0163401 25.495 455 251 16 8 379 4 453 7.81e-28 114
Msa1239580 MtrunA17_Chr1g0163351 23.077 455 257 14 8 379 2 446 8.63e-28 114
Msa1239580 MtrunA17_Chr1g0183611 24.390 369 198 11 88 379 2 366 1.49e-26 109
Msa1239580 MtrunA17_Chr5g0403451 44.762 105 40 2 293 380 118 221 1.34e-24 102
Msa1239580 MtrunA17_Chr1g0204371 46.602 103 54 1 1 102 1 103 5.84e-23 92.4
Msa1239580 MtrunA17_Chr1g0163361 25.214 234 165 6 42 266 51 283 1.04e-18 85.5
Msa1239580 MtrunA17_Chr8g0357121 68.627 51 15 1 330 380 43 92 1.63e-17 78.6
Msa1239580 MtrunA17_Chr6g0449331 23.396 265 188 9 13 266 8 268 3.74e-17 83.2
Msa1239580 MtrunA17_Chr6g0449331 29.134 127 67 2 270 379 336 456 3.60e-12 67.8
Msa1239580 MtrunA17_Chr2g0308941 29.947 187 113 5 77 247 11 195 5.87e-17 79.0
Msa1239580 MtrunA17_Chr1g0163371 36.220 127 59 4 270 379 42 163 1.37e-16 78.2
Msa1239580 MtrunA17_Chr8g0351411 75.000 40 9 1 342 381 1 39 1.47e-15 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239580 AT2G45510.1 42.117 444 180 9 12 380 8 449 1.27e-112 338
Msa1239580 AT2G44890.1 40.498 442 186 7 9 380 15 449 4.86e-107 324
Msa1239580 AT2G44890.2 40.566 424 180 6 9 366 15 432 6.56e-103 313
Msa1239580 AT3G56630.1 33.976 415 194 12 39 380 32 439 2.34e-62 208
Msa1239580 AT1G34540.1 32.524 412 204 10 39 380 32 439 5.55e-60 202
Msa1239580 AT1G69500.1 38.672 256 156 1 12 267 2 256 2.19e-59 201
Msa1239580 AT1G69500.1 36.424 151 73 3 247 380 321 465 1.12e-24 105
Msa1239580 AT3G48520.1 31.050 438 227 12 17 380 5 441 5.23e-53 184
Msa1239580 AT1G63710.1 29.204 452 231 11 11 379 3 448 8.14e-53 184
Msa1239580 AT5G23190.1 30.067 449 222 13 17 379 39 481 9.13e-53 184
Msa1239580 AT2G27690.1 32.316 393 194 7 53 380 48 433 2.91e-52 181
Msa1239580 AT5G58860.1 30.290 449 224 14 10 379 11 449 1.11e-49 175
Msa1239580 AT3G01900.1 30.900 411 220 12 31 380 25 432 3.93e-49 173
Msa1239580 AT2G45970.1 27.655 452 236 12 14 379 5 451 4.80e-49 174
Msa1239580 AT1G01600.1 28.774 424 213 11 42 379 34 454 8.27e-48 171
Msa1239580 AT4G00360.1 28.302 424 213 11 42 379 34 452 4.19e-47 169
Msa1239580 AT5G63450.1 28.704 432 233 12 19 380 18 444 8.36e-44 159
Msa1239580 AT1G24540.1 28.764 445 231 12 15 379 23 461 1.65e-43 158
Msa1239580 AT5G63450.2 28.704 432 233 12 19 380 76 502 2.72e-43 159
Msa1239580 AT1G13140.1 28.074 431 218 14 36 379 40 465 1.20e-41 154
Msa1239580 AT3G26125.1 28.385 384 183 9 83 379 95 473 5.57e-41 152
Msa1239580 AT1G13140.2 28.889 405 222 13 36 379 40 439 1.04e-40 150
Msa1239580 AT5G52320.2 25.980 408 230 11 42 379 38 443 3.36e-39 146
Msa1239580 AT1G13150.1 27.791 421 216 12 42 379 43 458 4.15e-39 146
Msa1239580 AT5G52320.1 25.980 408 230 11 42 379 38 443 4.28e-39 146
Msa1239580 AT1G65340.1 26.764 411 224 15 42 379 38 444 6.43e-39 145
Msa1239580 AT1G57750.1 27.222 360 199 10 81 379 80 437 2.21e-35 135
Msa1239580 AT2G21910.1 25.517 435 230 15 29 379 23 447 2.51e-34 133
Msa1239580 AT2G23180.1 26.144 459 235 17 13 379 7 453 4.90e-34 132
Msa1239580 AT4G39500.2 23.864 440 256 13 15 379 22 457 1.98e-33 130
Msa1239580 AT4G32170.1 25.721 451 231 15 15 379 12 444 8.85e-33 129
Msa1239580 AT1G57750.2 26.513 347 192 10 81 366 80 424 8.83e-32 125
Msa1239580 AT1G47620.1 25.118 422 222 13 42 379 45 456 3.11e-30 122
Msa1239580 AT4G39510.1 22.398 442 266 11 13 379 7 446 3.78e-30 121
Msa1239580 AT4G39500.1 24.595 370 206 10 81 379 40 407 3.97e-30 120
Msa1239580 AT5G08250.2 29.615 260 162 8 17 263 40 291 1.65e-28 117
Msa1239580 AT5G08250.2 47.826 92 30 2 305 379 389 479 6.01e-18 85.9
Msa1239580 AT5G08250.1 31.925 213 135 5 57 263 21 229 1.98e-28 116
Msa1239580 AT5G08250.1 47.826 92 30 2 305 379 327 417 8.73e-18 85.1
Msa1239580 AT5G02900.1 23.318 446 233 18 15 379 2 419 1.38e-22 99.4
Msa1239580 AT4G39490.1 26.087 253 174 8 24 266 17 266 5.13e-22 98.2
Msa1239580 AT4G39490.1 35.106 94 44 2 303 379 364 457 1.28e-12 69.7
Msa1239580 AT4G39480.1 26.786 224 153 7 56 271 51 271 1.47e-20 93.6
Msa1239580 AT4G39480.1 34.783 92 43 1 305 379 363 454 4.37e-13 70.9

Find 57 sgRNAs with CRISPR-Local

Find 460 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGCCCTTTCAAGTTTA+TGG 0.099264 8_2:+21452447 Msa1239580:CDS
CTTTCCATAGTTCTCAAAAT+TGG 0.206087 8_2:-21445799 None:intergenic
CTAGTAAATCCTTCAAATTT+TGG 0.227984 8_2:-21450982 None:intergenic
AGGTGATGACTTGCGGGTTT+AGG 0.243103 8_2:-21445470 None:intergenic
GGTGATGACTTGCGGGTTTA+GGG 0.293498 8_2:-21445469 None:intergenic
ATAAACTTGAAAGGGCTTTC+TGG 0.293598 8_2:-21452445 None:intergenic
ATCGTTATGTTGATGTCTTT+TGG 0.298512 8_2:+21451520 Msa1239580:CDS
CAAAATTTGAAGGATTTACT+AGG 0.351832 8_2:+21450983 Msa1239580:CDS
GAAAGATGGCTTGATGAAAA+TGG 0.366675 8_2:+21452412 Msa1239580:CDS
AAATCCATGATGGACGGAAA+TGG 0.383850 8_2:-21445501 None:intergenic
TGGTGAAGGTGATGACTTGC+GGG 0.397819 8_2:-21445476 None:intergenic
AGTTCTCCACCAAGATGTTA+AGG 0.407074 8_2:+21451068 Msa1239580:CDS
AGTATATACTCAACATTACT+TGG 0.417213 8_2:-21445771 None:intergenic
TTCATCCTCCCCATTGCATA+AGG 0.419437 8_2:-21452352 None:intergenic
AAGAAGTATCATCCTGTTGC+TGG 0.428638 8_2:+21445627 Msa1239580:CDS
TCATATCAACCTTATGCAAT+GGG 0.435413 8_2:+21452343 Msa1239580:CDS
TCACTGTTGATGGCGAGAAA+TGG 0.443626 8_2:+21451017 Msa1239580:CDS
AATCCATGATGGACGGAAAT+GGG 0.445119 8_2:-21445500 None:intergenic
TTGAATACTGTGCCAGCAAC+AGG 0.447778 8_2:-21445639 None:intergenic
TTGAAGGATTTACTAGGAGA+TGG 0.454902 8_2:+21450989 Msa1239580:CDS
CATCCCATTTCCGTCCATCA+TGG 0.466730 8_2:+21445497 Msa1239580:exon
ATCTGTGGAACAAGTGAAGA+AGG 0.471256 8_2:+21451450 Msa1239580:CDS
ACTAAAGTCCCTTAACATCT+TGG 0.471904 8_2:-21451077 None:intergenic
TGGGGAGGATGAAATTCATA+TGG 0.472302 8_2:+21452362 Msa1239580:CDS
ATAAAGAAGTTTCTCAACAT+TGG 0.474546 8_2:+21451546 Msa1239580:CDS
GTACAACTACCAAAATTTGA+AGG 0.481829 8_2:+21450973 Msa1239580:CDS
TATAAACTTCACTTCTGAAA+GGG 0.487061 8_2:-21445740 None:intergenic
AGCCTTCCCACAGGAAGTGC+AGG 0.503760 8_2:-21452157 None:intergenic
GTTCTCCACCAAGATGTTAA+GGG 0.505537 8_2:+21451069 Msa1239580:CDS
GAAAAGCCATAAACTTGAAA+GGG 0.506145 8_2:-21452453 None:intergenic
CAACAAATGAAGAAATCAAA+GGG 0.513882 8_2:+21451642 Msa1239580:CDS
GTCATATCAACCTTATGCAA+TGG 0.514035 8_2:+21452342 Msa1239580:CDS
TGAAAAGCCATAAACTTGAA+AGG 0.516827 8_2:-21452454 None:intergenic
CAAGGAAGTACAAAACATAC+AGG 0.527756 8_2:+21445709 Msa1239580:CDS
GTATAAACTTCACTTCTGAA+AGG 0.533183 8_2:-21445741 None:intergenic
TCAACAAATGAAGAAATCAA+AGG 0.541134 8_2:+21451641 Msa1239580:CDS
AAAGTCCCTTAACATCTTGG+TGG 0.546192 8_2:-21451074 None:intergenic
GCGAGAAATGGCGCGAGCAA+AGG 0.568220 8_2:+21451029 Msa1239580:CDS
ACTGAACTTGACAGCATCTG+TGG 0.571790 8_2:+21451435 Msa1239580:CDS
GGGGAGGATGAAATTCATAT+GGG 0.574688 8_2:+21452363 Msa1239580:CDS
AGGAATTCAGACCTGAAAGA+TGG 0.575283 8_2:+21452398 Msa1239580:CDS
GTTTCTCAACATTGGATCAG+AGG 0.576083 8_2:+21451554 Msa1239580:CDS
ACTTGCAGTATCAAAAGCAT+TGG 0.582895 8_2:-21451484 None:intergenic
ATTATATGACTGATCTTGCA+AGG 0.584790 8_2:+21445691 Msa1239580:CDS
GCAGGTCCTCAGATATGCCT+AGG 0.585696 8_2:+21452944 Msa1239580:intron
ATGGTGAAGGTGATGACTTG+CGG 0.601649 8_2:-21445477 None:intergenic
GGACGGAAATGGGATGGTGA+AGG 0.604990 8_2:-21445490 None:intergenic
GATAGAAAATCCATGATGGA+CGG 0.605938 8_2:-21445507 None:intergenic
ATTTGATAGAAAATCCATGA+TGG 0.606150 8_2:-21445511 None:intergenic
ATCAACCTTATGCAATGGGG+AGG 0.625147 8_2:+21452347 Msa1239580:CDS
GAGTTTCAGTGAGAACTGCA+TGG 0.628203 8_2:-21452123 None:intergenic
TCCTTTCCTAGGCATATCTG+AGG 0.633793 8_2:-21452950 None:intergenic
CATATGGGGTGATGATGCAG+AGG 0.636597 8_2:+21452378 Msa1239580:CDS
TCTGTGGAACAAGTGAAGAA+GGG 0.644904 8_2:+21451451 Msa1239580:CDS
CATGATGGACGGAAATGGGA+TGG 0.671953 8_2:-21445496 None:intergenic
CATATCAACCTTATGCAATG+GGG 0.714073 8_2:+21452344 Msa1239580:CDS
GGGAGGATGAAATTCATATG+GGG 0.726219 8_2:+21452364 Msa1239580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATACTCTTTATTAAA+TGG + chr8_2:21445825-21445844 Msa1239580:intron 10.0%
!!! TTTTCTATCTATAATTTATA+TGG - chr8_2:21446024-21446043 None:intergenic 10.0%
!! TAGAAAATTTCTAAATTTAA+TGG + chr8_2:21446037-21446056 Msa1239580:intron 10.0%
!! ATATAATAATTTCCTTTAAT+GGG - chr8_2:21446856-21446875 None:intergenic 10.0%
!! TATATAATAATTTCCTTTAA+TGG - chr8_2:21446857-21446876 None:intergenic 10.0%
!! ATTGTATTATTATAATACAA+TGG + chr8_2:21448029-21448048 Msa1239580:intron 10.0%
!!! AATGTCAAATTTAAAATTAT+AGG + chr8_2:21448124-21448143 Msa1239580:intron 10.0%
!! ATATAATAATTTCCTTTAAT+GGG - chr8_2:21446856-21446875 None:intergenic 10.0%
!! TATATAATAATTTCCTTTAA+TGG - chr8_2:21446857-21446876 None:intergenic 10.0%
!!! GATATATTTTAATTTGAACT+AGG + chr8_2:21446285-21446304 Msa1239580:intron 15.0%
!! TATAATAATTTCCTTTAATG+GGG - chr8_2:21446855-21446874 None:intergenic 15.0%
!!! TAATGAAATTGTTTTTAAGA+TGG + chr8_2:21446890-21446909 Msa1239580:intron 15.0%
!!! AATTCATATTTTACACTTAA+TGG + chr8_2:21446972-21446991 Msa1239580:intron 15.0%
!! CATGATACTTATTAAAATTA+AGG - chr8_2:21447010-21447029 None:intergenic 15.0%
!!! AATTTTAATAAGTATCATGT+AGG + chr8_2:21447011-21447030 Msa1239580:intron 15.0%
!!! TTAAAACTTTTGAAATATGT+GGG - chr8_2:21447221-21447240 None:intergenic 15.0%
!!! TTTAAAACTTTTGAAATATG+TGG - chr8_2:21447222-21447241 None:intergenic 15.0%
!! TAATTAAATTTAAATTCGAG+GGG - chr8_2:21447618-21447637 None:intergenic 15.0%
!! CTAATTAAATTTAAATTCGA+GGG - chr8_2:21447619-21447638 None:intergenic 15.0%
!!! TATTTTATTGATGAATATGA+TGG - chr8_2:21447971-21447990 None:intergenic 15.0%
!! ATAATACAATGATGATAATT+GGG - chr8_2:21448019-21448038 None:intergenic 15.0%
!! AATAATACAATGATGATAAT+TGG - chr8_2:21448020-21448039 None:intergenic 15.0%
!! ACAAATTATATATACACATT+TGG - chr8_2:21448337-21448356 None:intergenic 15.0%
!! GACAAGATATATAAAAATAT+AGG + chr8_2:21448570-21448589 Msa1239580:intron 15.0%
!! TATAATAATTTCCTTTAATG+GGG - chr8_2:21446855-21446874 None:intergenic 15.0%
!!! TAATGAAATTGTTTTTAAGA+TGG + chr8_2:21446890-21446909 Msa1239580:intron 15.0%
!!! AATTCATATTTTACACTTAA+TGG + chr8_2:21446972-21446991 Msa1239580:intron 15.0%
!! CATGATACTTATTAAAATTA+AGG - chr8_2:21447010-21447029 None:intergenic 15.0%
!!! AATTTTAATAAGTATCATGT+AGG + chr8_2:21447011-21447030 Msa1239580:intron 15.0%
!! TAATTCTCTACAATATATTT+AGG + chr8_2:21452516-21452535 Msa1239580:intron 15.0%
!! TTTAACATATTTGAATAACA+TGG - chr8_2:21452846-21452865 None:intergenic 15.0%
!!! TTCATTGATTTTTACTTTTG+TGG + chr8_2:21445858-21445877 Msa1239580:intron 20.0%
!!! TGTGATAAGTTTAAAGTAAA+AGG + chr8_2:21446194-21446213 Msa1239580:intron 20.0%
!! TAAAATATATCAATCACTCT+TGG - chr8_2:21446276-21446295 None:intergenic 20.0%
!!! TTTGATTTTCCAAATATACT+AGG - chr8_2:21446727-21446746 None:intergenic 20.0%
!! ATAATAATTTCCTTTAATGG+GGG - chr8_2:21446854-21446873 None:intergenic 20.0%
!!! ATATGAATTTGACTTGATAT+TGG - chr8_2:21446961-21446980 None:intergenic 20.0%
!!! TAAAACTTTTGAAATATGTG+GGG - chr8_2:21447220-21447239 None:intergenic 20.0%
!! GCTAATTAAATTTAAATTCG+AGG - chr8_2:21447620-21447639 None:intergenic 20.0%
!! TTTCTATAGTGTTATGATAA+TGG - chr8_2:21447654-21447673 None:intergenic 20.0%
!! TTATCATAACACTATAGAAA+AGG + chr8_2:21447654-21447673 Msa1239580:intron 20.0%
!! TATCATAACACTATAGAAAA+GGG + chr8_2:21447655-21447674 Msa1239580:intron 20.0%
!! TCAAGTCTATAAAATAAACT+TGG + chr8_2:21447902-21447921 Msa1239580:intron 20.0%
!!! TTTGTTAATTTCTTTTACGT+GGG - chr8_2:21448168-21448187 None:intergenic 20.0%
!!! TTTTGTTAATTTCTTTTACG+TGG - chr8_2:21448169-21448188 None:intergenic 20.0%
!!! TGACTAGTTTTATATTTCAT+CGG - chr8_2:21448691-21448710 None:intergenic 20.0%
!!! ATTCCATTTTTCAATTTGTT+TGG + chr8_2:21449778-21449797 Msa1239580:intron 20.0%
!!! TTTGATTTTCCAAATATACT+AGG - chr8_2:21446727-21446746 None:intergenic 20.0%
!! ATAATAATTTCCTTTAATGG+GGG - chr8_2:21446854-21446873 None:intergenic 20.0%
!!! ATATGAATTTGACTTGATAT+TGG - chr8_2:21446961-21446980 None:intergenic 20.0%
!! AATATTGTGATTAAATGAAG+AGG + chr8_2:21451235-21451254 Msa1239580:intron 20.0%
!!! TTTTTAAACTTTGTTATTGC+TGG + chr8_2:21451923-21451942 Msa1239580:intron 20.0%
!!! TTTTAAACTTTGTTATTGCT+GGG + chr8_2:21451924-21451943 Msa1239580:intron 20.0%
!!! GTTAGTAGAATTTTTCTATA+CGG + chr8_2:21452478-21452497 Msa1239580:intron 20.0%
!! TCAACAAAAACAAAAGAAAA+CGG + chr8_2:21452659-21452678 Msa1239580:intron 20.0%
!! ATATTTGAATAACATGGTAA+TGG - chr8_2:21452840-21452859 None:intergenic 20.0%
! ATTTGATAGAAAATCCATGA+TGG - chr8_2:21445514-21445533 None:intergenic 25.0%
!! TATAAACTTCACTTCTGAAA+GGG - chr8_2:21445743-21445762 None:intergenic 25.0%
! AGTATATACTCAACATTACT+TGG - chr8_2:21445774-21445793 None:intergenic 25.0%
!!! AAAACCAATTTTGAGAACTA+TGG + chr8_2:21445795-21445814 Msa1239580:CDS 25.0%
! AATAGTATAGCTGTATAGAT+CGG + chr8_2:21445891-21445910 Msa1239580:intron 25.0%
!!! TTGCTTATTTTTTTACTGCA+GGG + chr8_2:21446241-21446260 Msa1239580:intron 25.0%
! ATGCAGAGAATACTAAAAAA+TGG + chr8_2:21446461-21446480 Msa1239580:intron 25.0%
!! TTTGCAGGTTAATTATTTTC+CGG - chr8_2:21446541-21446560 None:intergenic 25.0%
! TTTGGAAAATCAAAGAAAGA+AGG + chr8_2:21446733-21446752 Msa1239580:intron 25.0%
! TTGGAAAATCAAAGAAAGAA+GGG + chr8_2:21446734-21446753 Msa1239580:intron 25.0%
!! GAAATATTTTCTGTGTGTAT+CGG + chr8_2:21446763-21446782 Msa1239580:intron 25.0%
!!! AAAACTTTTGAAATATGTGG+GGG - chr8_2:21447219-21447238 None:intergenic 25.0%
!! TTGTTAATTTCTTTTACGTG+GGG - chr8_2:21448167-21448186 None:intergenic 25.0%
!!! CTTACAGAAACTATTTTTCA+AGG + chr8_2:21448305-21448324 Msa1239580:intron 25.0%
! CAAAGAATAATGTGTTTGTT+GGG - chr8_2:21448755-21448774 Msa1239590:CDS 25.0%
! ACAAAGAATAATGTGTTTGT+TGG - chr8_2:21448756-21448775 Msa1239590:CDS 25.0%
! ATCATTTGAATCTGATAAGA+TGG - chr8_2:21448784-21448803 Msa1239590:CDS 25.0%
! TGTTAGTGATGTGAAAAAAT+GGG - chr8_2:21449057-21449076 Msa1239590:CDS 25.0%
! TTGTTAGTGATGTGAAAAAA+TGG - chr8_2:21449058-21449077 Msa1239590:CDS 25.0%
!!! ATTTATTTTCATACCTCTGT+CGG + chr8_2:21449288-21449307 Msa1239580:intron 25.0%
! ATAATGTGGAAAGAATTGTA+TGG + chr8_2:21449735-21449754 Msa1239580:intron 25.0%
! AAAATGGAATAATGCTAACA+AGG - chr8_2:21449768-21449787 Msa1239590:CDS 25.0%
! ATGCCAAACAAATTGAAAAA+TGG - chr8_2:21449784-21449803 Msa1239590:CDS 25.0%
!!! TTTTTGATGGACAGAATTTT+CGG - chr8_2:21449895-21449914 Msa1239590:CDS 25.0%
! AACAACAATCTAAGGAATTA+TGG - chr8_2:21450044-21450063 None:intergenic 25.0%
!! TTTGCAGGTTAATTATTTTC+CGG - chr8_2:21446541-21446560 None:intergenic 25.0%
! TTTGGAAAATCAAAGAAAGA+AGG + chr8_2:21446733-21446752 Msa1239580:intron 25.0%
! TTGGAAAATCAAAGAAAGAA+GGG + chr8_2:21446734-21446753 Msa1239580:intron 25.0%
!! GAAATATTTTCTGTGTGTAT+CGG + chr8_2:21446763-21446782 Msa1239580:intron 25.0%
!! CTAGTAAATCCTTCAAATTT+TGG - chr8_2:21450985-21451004 None:intergenic 25.0%
! CAAAATTTGAAGGATTTACT+AGG + chr8_2:21450983-21451002 Msa1239580:CDS 25.0%
!! AATTATTGCCTTCTTTTATG+TGG + chr8_2:21451324-21451343 Msa1239580:intron 25.0%
! ACTTGATCGAATAATTTAGT+AGG + chr8_2:21451362-21451381 Msa1239580:intron 25.0%
!! TCTTTTCATGAAATCAACAT+TGG + chr8_2:21451386-21451405 Msa1239580:CDS 25.0%
!! TCAATTTTCAAAGTTGCATT+TGG + chr8_2:21451411-21451430 Msa1239580:CDS 25.0%
! ATAAAGAAGTTTCTCAACAT+TGG + chr8_2:21451546-21451565 Msa1239580:CDS 25.0%
! TCAACAAATGAAGAAATCAA+AGG + chr8_2:21451641-21451660 Msa1239580:CDS 25.0%
! CAACAAATGAAGAAATCAAA+GGG + chr8_2:21451642-21451661 Msa1239580:CDS 25.0%
! TGGATAATAGTTTGAGAAAA+AGG - chr8_2:21451753-21451772 None:intergenic 25.0%
!!! TTTTTTACACTATATCCATC+TGG - chr8_2:21452311-21452330 None:intergenic 25.0%
! AGATGGATATAGTGTAAAAA+AGG + chr8_2:21452310-21452329 Msa1239580:intron 25.0%
! TTTAGGTAAATGATCGTTAT+AGG + chr8_2:21452533-21452552 Msa1239580:intron 25.0%
! TTAGGTAAATGATCGTTATA+GGG + chr8_2:21452534-21452553 Msa1239580:intron 25.0%
ATTATATGACTGATCTTGCA+AGG + chr8_2:21445691-21445710 Msa1239580:CDS 30.0%
GTATAAACTTCACTTCTGAA+AGG - chr8_2:21445744-21445763 None:intergenic 30.0%
CTTTCCATAGTTCTCAAAAT+TGG - chr8_2:21445802-21445821 None:intergenic 30.0%
!! CAATTTTGAGAACTATGGAA+AGG + chr8_2:21445800-21445819 Msa1239580:CDS 30.0%
GGTAAAGTGGTAAAACTATA+AGG - chr8_2:21446064-21446083 None:intergenic 30.0%
AATTTGATCATCTATAGCAG+CGG - chr8_2:21446085-21446104 None:intergenic 30.0%
CAATACCAATTTCTTGATGT+CGG - chr8_2:21446126-21446145 None:intergenic 30.0%
CATCAAGAAATTGGTATTGT+TGG + chr8_2:21446127-21446146 Msa1239580:intron 30.0%
!!! CTTGCTTATTTTTTTACTGC+AGG + chr8_2:21446240-21446259 Msa1239580:intron 30.0%
ATATTCACCAGCATAACAAT+AGG - chr8_2:21446331-21446350 None:intergenic 30.0%
TATTGTTATGCTGGTGAATA+TGG + chr8_2:21446330-21446349 Msa1239580:intron 30.0%
TAATCTGTTCTACCTTCAAA+TGG - chr8_2:21446390-21446409 None:intergenic 30.0%
! TAACCTAATAAGTGTTGTTG+CGG + chr8_2:21446511-21446530 Msa1239580:intron 30.0%
!!! TCACAGTTTGTTATTTTTGC+AGG - chr8_2:21446556-21446575 None:intergenic 30.0%
!!! TTTTTAAGATGGAGCAGATT+CGG + chr8_2:21446901-21446920 Msa1239580:intron 30.0%
! CTGGTATTTTACATGATTTG+TGG - chr8_2:21447059-21447078 None:intergenic 30.0%
! TGTTAATTTCTTTTACGTGG+GGG - chr8_2:21448166-21448185 None:intergenic 30.0%
AATTTCATACAAGTTGTAGC+AGG + chr8_2:21448188-21448207 Msa1239580:intron 30.0%
TTAAGTCTTCCTTCATGTTA+TGG - chr8_2:21448461-21448480 None:intergenic 30.0%
! ATAATGTGTTTGTTGGGAAA+GGG - chr8_2:21448749-21448768 Msa1239590:CDS 30.0%
! AATAATGTGTTTGTTGGGAA+AGG - chr8_2:21448750-21448769 Msa1239590:CDS 30.0%
TAGCACTGTTAAACAAAGTA+GGG - chr8_2:21448815-21448834 Msa1239590:CDS 30.0%
!! ATTAAGTTGGTCCTAATAGT+AGG + chr8_2:21448840-21448859 Msa1239580:intron 30.0%
! AATTTTAAACCAAACCTAGG+AGG - chr8_2:21449239-21449258 Msa1239590:CDS 30.0%
! TCCTAGGTTTGGTTTAAAAT+TGG + chr8_2:21449238-21449257 Msa1239580:intron 30.0%
! CCTAGGTTTGGTTTAAAATT+GGG + chr8_2:21449239-21449258 Msa1239580:intron 30.0%
!! AATTGGGATTAGTTACTTTG+AGG + chr8_2:21449255-21449274 Msa1239580:intron 30.0%
!! ATTGGGATTAGTTACTTTGA+GGG + chr8_2:21449256-21449275 Msa1239580:intron 30.0%
TTGAAAAATTGCCAAACTCA+TGG - chr8_2:21449472-21449491 Msa1239590:CDS 30.0%
! TTGTTGTTGGAAACTATCTA+CGG - chr8_2:21449613-21449632 Msa1239590:CDS 30.0%
! GAAAAGTACATCAGATAATG+TGG + chr8_2:21449721-21449740 Msa1239580:intron 30.0%
! AATTTGTTTGGCATCTGATT+TGG + chr8_2:21449790-21449809 Msa1239580:intron 30.0%
TCCATCAAAAACTTCAATTC+TGG + chr8_2:21449904-21449923 Msa1239580:intron 30.0%
! TCCAGAATTGAAGTTTTTGA+TGG - chr8_2:21449908-21449927 Msa1239590:CDS 30.0%
! AATTCCTTAGATTGTTGTTG+CGG + chr8_2:21450045-21450064 Msa1239580:intron 30.0%
!!! TCACAGTTTGTTATTTTTGC+AGG - chr8_2:21446556-21446575 None:intergenic 30.0%
! CTGGTATTTTACATGATTTG+TGG - chr8_2:21447059-21447078 None:intergenic 30.0%
TGCATATTTGCATTGCTAAA+AGG + chr8_2:21450815-21450834 Msa1239580:intron 30.0%
GATACAATACGTATCTGATA+CGG - chr8_2:21450849-21450868 None:intergenic 30.0%
GTATTGTATCTGTGCATTAT+AGG + chr8_2:21450859-21450878 Msa1239580:intron 30.0%
TATCTGTGCATTATAGGTTA+GGG + chr8_2:21450865-21450884 Msa1239580:intron 30.0%
GCATTTGTTTGATTCTTAGA+AGG + chr8_2:21450907-21450926 Msa1239580:intron 30.0%
ATTCTTAGAAGGATTAAGTG+TGG + chr8_2:21450918-21450937 Msa1239580:intron 30.0%
TGGCTTAAACATTTCTATGT+AGG + chr8_2:21450946-21450965 Msa1239580:intron 30.0%
GGCTTAAACATTTCTATGTA+GGG + chr8_2:21450947-21450966 Msa1239580:intron 30.0%
GCTTAAACATTTCTATGTAG+GGG + chr8_2:21450948-21450967 Msa1239580:intron 30.0%
GTACAACTACCAAAATTTGA+AGG + chr8_2:21450973-21450992 Msa1239580:CDS 30.0%
! ATCGTTATGTTGATGTCTTT+TGG + chr8_2:21451520-21451539 Msa1239580:CDS 30.0%
TGTACTATGTAGAGAAAAAG+TGG + chr8_2:21451838-21451857 Msa1239580:intron 30.0%
! CATCAAGATTCTTTTTATGC+AGG + chr8_2:21452253-21452272 Msa1239580:intron 30.0%
ATAGTGTAAAAAAGGAGACA+TGG + chr8_2:21452318-21452337 Msa1239580:intron 30.0%
TCATATCAACCTTATGCAAT+GGG + chr8_2:21452343-21452362 Msa1239580:CDS 30.0%
GAAAAGCCATAAACTTGAAA+GGG - chr8_2:21452456-21452475 None:intergenic 30.0%
TGAAAAGCCATAAACTTGAA+AGG - chr8_2:21452457-21452476 None:intergenic 30.0%
!!! TTTCAAGTTTATGGCTTTTC+AGG + chr8_2:21452456-21452475 Msa1239580:CDS 30.0%
TAGGTAAATGATCGTTATAG+GGG + chr8_2:21452535-21452554 Msa1239580:intron 30.0%
TTTGTGACATGTATCATTGT+TGG - chr8_2:21452577-21452596 None:intergenic 30.0%
AAATCACTATCCTCATCTTA+CGG - chr8_2:21452764-21452783 None:intergenic 30.0%
TCACCTTTGACTATATATCA+AGG + chr8_2:21452796-21452815 Msa1239580:intron 30.0%
!! TTTGAATAACATGGTAATGG+AGG - chr8_2:21452837-21452856 None:intergenic 30.0%
ATACATTGCATACAAAGTCT+TGG - chr8_2:21452873-21452892 None:intergenic 30.0%
ATTTAAGCACACTCTTACAA+AGG - chr8_2:21452903-21452922 None:intergenic 30.0%
! GATAGAAAATCCATGATGGA+CGG - chr8_2:21445510-21445529 None:intergenic 35.0%
GACAAAGCTGCAAAAACAAA+AGG - chr8_2:21445537-21445556 None:intergenic 35.0%
! CAAGGAAGTACAAAACATAC+AGG + chr8_2:21445709-21445728 Msa1239580:CDS 35.0%
CATTACCGACATCAAGAAAT+TGG + chr8_2:21446118-21446137 Msa1239580:intron 35.0%
AAGATCCGACAATACATGTT+CGG + chr8_2:21446156-21446175 Msa1239580:intron 35.0%
AAACTCCGAACATGTATTGT+CGG - chr8_2:21446164-21446183 None:intergenic 35.0%
!!! TTTTTTACTGCAGGGAATTC+AGG + chr8_2:21446249-21446268 Msa1239580:intron 35.0%
TGTTAGACCTATTGTTATGC+TGG + chr8_2:21446321-21446340 Msa1239580:intron 35.0%
GTTCTACCTTCAAATGGAAA+GGG - chr8_2:21446384-21446403 None:intergenic 35.0%
TGTTCTACCTTCAAATGGAA+AGG - chr8_2:21446385-21446404 None:intergenic 35.0%
!! AACAGATTATTTCTGAGCTG+AGG + chr8_2:21446401-21446420 Msa1239580:intron 35.0%
CAAACTGTGAAATAAACCTG+AGG + chr8_2:21446566-21446585 Msa1239580:intron 35.0%
ACTCAGACACCTAGTATATT+TGG + chr8_2:21446715-21446734 Msa1239580:intron 35.0%
!! CAGATTCGGTTACTCTTTTA+AGG + chr8_2:21446915-21446934 Msa1239580:intron 35.0%
TAAGTGTATCATTCTAGCAC+TGG - chr8_2:21447313-21447332 None:intergenic 35.0%
CACTTAACACACAGTGAATT+CGG + chr8_2:21447327-21447346 Msa1239580:intron 35.0%
CTATATGAACCAAAGACACT+TGG + chr8_2:21447359-21447378 Msa1239580:intron 35.0%
TAACATACACCAAGTGTCTT+TGG - chr8_2:21447371-21447390 None:intergenic 35.0%
TGATTACCATAAGCCCTTAT+GGG - chr8_2:21447575-21447594 None:intergenic 35.0%
ATGATTACCATAAGCCCTTA+TGG - chr8_2:21447576-21447595 None:intergenic 35.0%
!! TCCCATATGAACCTTTTTCA+TGG + chr8_2:21447723-21447742 Msa1239580:intron 35.0%
CCCATGAAAAAGGTTCATAT+GGG - chr8_2:21447727-21447746 None:intergenic 35.0%
!! CCCATATGAACCTTTTTCAT+GGG + chr8_2:21447724-21447743 Msa1239580:intron 35.0%
TCCCATGAAAAAGGTTCATA+TGG - chr8_2:21447728-21447747 None:intergenic 35.0%
GATCTCCAATCATAAAGGTT+GGG + chr8_2:21447746-21447765 Msa1239580:intron 35.0%
ACTAGAAAACGACAAGTGAT+GGG - chr8_2:21447774-21447793 None:intergenic 35.0%
! CGTTTCTCATTCATCTGTTT+TGG - chr8_2:21448600-21448619 None:intergenic 35.0%
AGCACTGTTAAACAAAGTAG+GGG - chr8_2:21448814-21448833 Msa1239590:CDS 35.0%
GTAGCACTGTTAAACAAAGT+AGG - chr8_2:21448816-21448835 Msa1239590:CDS 35.0%
CAGTGCTACAGAAATTAAGT+TGG + chr8_2:21448827-21448846 Msa1239580:intron 35.0%
GATGAAGATCAAGTCTATCT+TGG - chr8_2:21448960-21448979 Msa1239590:CDS 35.0%
AAAAAATGGGTGATAGACTC+GGG - chr8_2:21449044-21449063 Msa1239590:CDS 35.0%
GAAAAAATGGGTGATAGACT+CGG - chr8_2:21449045-21449064 Msa1239590:CDS 35.0%
AAGATGCACTTCAGATATGA+CGG + chr8_2:21449076-21449095 Msa1239580:intron 35.0%
CCAAAAGCAAATTTGACTCA+GGG - chr8_2:21449140-21449159 Msa1239590:CDS 35.0%
!!! GTCAAATTTGCTTTTGGCTT+AGG + chr8_2:21449143-21449162 Msa1239580:intron 35.0%
!!! AAATTTGCTTTTGGCTTAGG+AGG + chr8_2:21449146-21449165 Msa1239580:intron 35.0%
AAGCATATCACTGCAGATAT+CGG - chr8_2:21449187-21449206 Msa1239590:CDS 35.0%
! CCCAATTTTAAACCAAACCT+AGG - chr8_2:21449242-21449261 Msa1239590:CDS 35.0%
TTGTAATCAGTCCATGAGTT+TGG + chr8_2:21449458-21449477 Msa1239580:intron 35.0%
TCCAACAACAAACTTCTGTT+TGG + chr8_2:21449622-21449641 Msa1239580:intron 35.0%
!! ACCAAACAGAAGTTTGTTGT+TGG - chr8_2:21449626-21449645 Msa1239590:CDS 35.0%
CATGTTGTCCCAAATTTCTT+TGG + chr8_2:21449673-21449692 Msa1239580:intron 35.0%
CAAGGTTGCCAAAGAAATTT+GGG - chr8_2:21449684-21449703 Msa1239590:CDS 35.0%
ACAAGGTTGCCAAAGAAATT+TGG - chr8_2:21449685-21449704 Msa1239590:CDS 35.0%
AATTTCTTTGGCAACCTTGT+AGG + chr8_2:21449685-21449704 Msa1239580:intron 35.0%
TTCACTTTGTTAGATGTCCA+CGG - chr8_2:21449854-21449873 Msa1239590:CDS 35.0%
GGAGATGATTCTAACAATGA+CGG - chr8_2:21450019-21450038 Msa1239590:CDS 35.0%
ACAATCTAAGGAATTATGGC+TGG - chr8_2:21450040-21450059 None:intergenic 35.0%
CAAACTGTGAAATAAACCTG+AGG + chr8_2:21446566-21446585 Msa1239580:intron 35.0%
ACTCAGACACCTAGTATATT+TGG + chr8_2:21446715-21446734 Msa1239580:intron 35.0%
ATAAGTAATGCACAACATGC+TGG + chr8_2:21450748-21450767 Msa1239580:intron 35.0%
GTATCTGTGCATTATAGGTT+AGG + chr8_2:21450864-21450883 Msa1239580:intron 35.0%
ATCTGTGCATTATAGGTTAG+GGG + chr8_2:21450866-21450885 Msa1239580:intron 35.0%
AAGGATTAAGTGTGGCTTAA+TGG + chr8_2:21450926-21450945 Msa1239580:intron 35.0%
TTGAAGGATTTACTAGGAGA+TGG + chr8_2:21450989-21451008 Msa1239580:CDS 35.0%
! GATGGAATTTTCACTGTTGA+TGG + chr8_2:21451007-21451026 Msa1239580:CDS 35.0%
ACTAAAGTCCCTTAACATCT+TGG - chr8_2:21451080-21451099 None:intergenic 35.0%
CTGACATACCACATAAAAGA+AGG - chr8_2:21451335-21451354 None:intergenic 35.0%
! ACTTGCAGTATCAAAAGCAT+TGG - chr8_2:21451487-21451506 None:intergenic 35.0%
GTTGCATAGTTGAATACAGT+AGG - chr8_2:21451683-21451702 None:intergenic 35.0%
AAAGTGGAGATATTCTCTCA+AGG + chr8_2:21451854-21451873 Msa1239580:intron 35.0%
GTCATATCAACCTTATGCAA+TGG + chr8_2:21452342-21452361 Msa1239580:CDS 35.0%
CATATCAACCTTATGCAATG+GGG + chr8_2:21452344-21452363 Msa1239580:CDS 35.0%
! TTTTCATCAAGCCATCTTTC+AGG - chr8_2:21452412-21452431 None:intergenic 35.0%
GAAAGATGGCTTGATGAAAA+TGG + chr8_2:21452412-21452431 Msa1239580:CDS 35.0%
ATAAACTTGAAAGGGCTTTC+TGG - chr8_2:21452448-21452467 None:intergenic 35.0%
!! AGAAAGCCCTTTCAAGTTTA+TGG + chr8_2:21452447-21452466 Msa1239580:CDS 35.0%
AGGTAAATGATCGTTATAGG+GGG + chr8_2:21452536-21452555 Msa1239580:intron 35.0%
ATTTCATCCCTAAGGACATA+CGG - chr8_2:21452618-21452637 None:intergenic 35.0%
AAGTCAACATTTCATCCCTA+AGG - chr8_2:21452626-21452645 None:intergenic 35.0%
!! GGATGAAATGTTGACTTCAT+TGG + chr8_2:21452629-21452648 Msa1239580:intron 35.0%
CCACCTTGATATATAGTCAA+AGG - chr8_2:21452802-21452821 None:intergenic 35.0%
CCTTTGACTATATATCAAGG+TGG + chr8_2:21452799-21452818 Msa1239580:intron 35.0%
AGTTTGATTGAAATGCATGC+AGG + chr8_2:21452926-21452945 Msa1239580:intron 35.0%
!! AATCCATGATGGACGGAAAT+GGG - chr8_2:21445503-21445522 None:intergenic 40.0%
!! AAATCCATGATGGACGGAAA+TGG - chr8_2:21445504-21445523 None:intergenic 40.0%
!! AAGAAGTATCATCCTGTTGC+TGG + chr8_2:21445627-21445646 Msa1239580:CDS 40.0%
TACTGTCCAAAAATCAGACC+TGG + chr8_2:21445959-21445978 Msa1239580:intron 40.0%
ACTGTCCAAAAATCAGACCT+GGG + chr8_2:21445960-21445979 Msa1239580:intron 40.0%
! TATGACCCAGGTCTGATTTT+TGG - chr8_2:21445968-21445987 None:intergenic 40.0%
! GGTGAATATGGTTTTCCTGA+TGG + chr8_2:21446342-21446361 Msa1239580:intron 40.0%
TCAAATGGAAAGGGAAACCA+AGG - chr8_2:21446375-21446394 None:intergenic 40.0%
TGGTTTCCCTTTCCATTTGA+AGG + chr8_2:21446375-21446394 Msa1239580:intron 40.0%
CATCCGCAACAACACTTATT+AGG - chr8_2:21446517-21446536 None:intergenic 40.0%
AGAGGAACCTGTTGTATTCT+GGG - chr8_2:21446642-21446661 None:intergenic 40.0%
AGAATACAACAGGTTCCTCT+CGG + chr8_2:21446642-21446661 Msa1239580:intron 40.0%
TTCCTTTAATGGGGGAGAAA+CGG - chr8_2:21446846-21446865 None:intergenic 40.0%
ATTGACAGTATATGTCACGC+TGG - chr8_2:21447078-21447097 None:intergenic 40.0%
GTTTGATGCATCACACTCAA+AGG - chr8_2:21447269-21447288 None:intergenic 40.0%
TTGAGTGTGATGCATCAAAC+TGG + chr8_2:21447269-21447288 Msa1239580:intron 40.0%
!! AGACACTTGGTGTATGTTAG+AGG + chr8_2:21447372-21447391 Msa1239580:intron 40.0%
AGCGATAACACGAGAATTGT+GGG - chr8_2:21447418-21447437 None:intergenic 40.0%
ACCTATATGAGTGTCAAGTG+GGG - chr8_2:21447518-21447537 None:intergenic 40.0%
CACCTATATGAGTGTCAAGT+GGG - chr8_2:21447519-21447538 None:intergenic 40.0%
TCACCTATATGAGTGTCAAG+TGG - chr8_2:21447520-21447539 None:intergenic 40.0%
TGGTTGTAGCATACACTAGA+TGG - chr8_2:21447545-21447564 None:intergenic 40.0%
GATTGGAGATCCCATGAAAA+AGG - chr8_2:21447737-21447756 None:intergenic 40.0%
CATGGGATCTCCAATCATAA+AGG + chr8_2:21447741-21447760 Msa1239580:intron 40.0%
GGATCTCCAATCATAAAGGT+TGG + chr8_2:21447745-21447764 Msa1239580:intron 40.0%
CACTAGAAAACGACAAGTGA+TGG - chr8_2:21447775-21447794 None:intergenic 40.0%
!!! CATCACTTGTCGTTTTCTAG+TGG + chr8_2:21447773-21447792 Msa1239580:intron 40.0%
GGGAGGAAATTGAAGGAAAT+GGG - chr8_2:21447805-21447824 None:intergenic 40.0%
CATTTCCTTCAATTTCCTCC+CGG + chr8_2:21447804-21447823 Msa1239580:intron 40.0%
ATTTCCTTCAATTTCCTCCC+GGG + chr8_2:21447805-21447824 Msa1239580:intron 40.0%
AATTCGTAGACAAAAACCCC+GGG - chr8_2:21447825-21447844 None:intergenic 40.0%
GAATTCGTAGACAAAAACCC+CGG - chr8_2:21447826-21447845 None:intergenic 40.0%
GCTGTTCAACCATAACATGA+AGG + chr8_2:21448449-21448468 Msa1239580:intron 40.0%
TGCTACATGTGCCTACTATT+AGG - chr8_2:21448854-21448873 Msa1239590:CDS 40.0%
!! GTACTTCTGAAGCTTACTTC+CGG - chr8_2:21448900-21448919 Msa1239590:CDS 40.0%
TTTACCTCCTACACTTCTGT+GGG - chr8_2:21448987-21449006 Msa1239590:CDS 40.0%
AAAAATGGGTGATAGACTCG+GGG - chr8_2:21449043-21449062 Msa1239590:CDS 40.0%
!! CCCTGAGTCAAATTTGCTTT+TGG + chr8_2:21449137-21449156 Msa1239580:intron 40.0%
GCCAAAAGCAAATTTGACTC+AGG - chr8_2:21449141-21449160 Msa1239590:CDS 40.0%
TGCAGATATCGGAAAGTGAA+TGG - chr8_2:21449176-21449195 Msa1239590:CDS 40.0%
! AGTTACTTTGAGGGCATGAT+CGG + chr8_2:21449265-21449284 Msa1239580:intron 40.0%
TTGCAACTTCGCATTCCTTT+CGG + chr8_2:21449360-21449379 Msa1239580:intron 40.0%
ACTCCTTGAAGAATTGAAGG+CGG - chr8_2:21449537-21449556 Msa1239590:CDS 40.0%
CCAACTCCTTGAAGAATTGA+AGG - chr8_2:21449540-21449559 Msa1239590:CDS 40.0%
CCTTCAATTCTTCAAGGAGT+TGG + chr8_2:21449537-21449556 Msa1239580:intron 40.0%
TTGTTGGAAACTATCTACGG+TGG - chr8_2:21449610-21449629 Msa1239590:CDS 40.0%
!! GCATCTGATTTGGTTTCATC+TGG + chr8_2:21449800-21449819 Msa1239580:intron 40.0%
! ACTTCAATTCTGGAAACGTC+TGG + chr8_2:21449914-21449933 Msa1239580:intron 40.0%
! CTTCAATTCTGGAAACGTCT+GGG + chr8_2:21449915-21449934 Msa1239580:intron 40.0%
!! GTCTGGGAATTGTTTTGCAT+AGG + chr8_2:21449931-21449950 Msa1239580:intron 40.0%
TCATCCGCAACAACAATCTA+AGG - chr8_2:21450052-21450071 None:intergenic 40.0%
AGAGGAACCTGTTGTATTCT+GGG - chr8_2:21446642-21446661 None:intergenic 40.0%
AGAATACAACAGGTTCCTCT+CGG + chr8_2:21446642-21446661 Msa1239580:intron 40.0%
TTCCTTTAATGGGGGAGAAA+CGG - chr8_2:21446846-21446865 None:intergenic 40.0%
ATTGACAGTATATGTCACGC+TGG - chr8_2:21447078-21447097 None:intergenic 40.0%
AGTTCTCCACCAAGATGTTA+AGG + chr8_2:21451068-21451087 Msa1239580:CDS 40.0%
GTTCTCCACCAAGATGTTAA+GGG + chr8_2:21451069-21451088 Msa1239580:CDS 40.0%
AAAGTCCCTTAACATCTTGG+TGG - chr8_2:21451077-21451096 None:intergenic 40.0%
ATCTGTGGAACAAGTGAAGA+AGG + chr8_2:21451450-21451469 Msa1239580:CDS 40.0%
TCTGTGGAACAAGTGAAGAA+GGG + chr8_2:21451451-21451470 Msa1239580:CDS 40.0%
GTTTCTCAACATTGGATCAG+AGG + chr8_2:21451554-21451573 Msa1239580:CDS 40.0%
CTCAAGGTTTCTGCAAGTAA+AGG + chr8_2:21451870-21451889 Msa1239580:intron 40.0%
!! CAGCTTTTTCTTGTACTGCA+GGG - chr8_2:21452003-21452022 None:intergenic 40.0%
!! ATCAAAATTAGCCTTCCCAC+AGG - chr8_2:21452169-21452188 None:intergenic 40.0%
CACCATCGTGCTTGTATTAA+TGG + chr8_2:21452197-21452216 Msa1239580:intron 40.0%
GACCATTAATACAAGCACGA+TGG - chr8_2:21452202-21452221 None:intergenic 40.0%
TGGGGAGGATGAAATTCATA+TGG + chr8_2:21452362-21452381 Msa1239580:CDS 40.0%
GGGGAGGATGAAATTCATAT+GGG + chr8_2:21452363-21452382 Msa1239580:CDS 40.0%
GGGAGGATGAAATTCATATG+GGG + chr8_2:21452364-21452383 Msa1239580:CDS 40.0%
AGGAATTCAGACCTGAAAGA+TGG + chr8_2:21452398-21452417 Msa1239580:CDS 40.0%
GGTAAATGATCGTTATAGGG+GGG + chr8_2:21452537-21452556 Msa1239580:intron 40.0%
TTTCATCCCTAAGGACATAC+GGG - chr8_2:21452617-21452636 None:intergenic 40.0%
!! ACATGGTAATGGAGGTTCTA+GGG - chr8_2:21452829-21452848 None:intergenic 40.0%
!! AACATGGTAATGGAGGTTCT+AGG - chr8_2:21452830-21452849 None:intergenic 40.0%
ATGGTGAAGGTGATGACTTG+CGG - chr8_2:21445480-21445499 None:intergenic 45.0%
TTGAATACTGTGCCAGCAAC+AGG - chr8_2:21445642-21445661 None:intergenic 45.0%
GGTCATATACAGCTGCAGTA+AGG + chr8_2:21445981-21446000 Msa1239580:intron 45.0%
!! CAGTAAGGTGTTGTAGCTGT+AGG + chr8_2:21445996-21446015 Msa1239580:intron 45.0%
CATCTATAGCAGCGGTAAAG+TGG - chr8_2:21446077-21446096 None:intergenic 45.0%
TTCCTGATGGCATTGTACCT+TGG + chr8_2:21446355-21446374 Msa1239580:intron 45.0%
AACCAAGGTACAATGCCATC+AGG - chr8_2:21446360-21446379 None:intergenic 45.0%
! TAAGTGTTGTTGCGGATGAC+CGG + chr8_2:21446519-21446538 Msa1239580:intron 45.0%
AGGAACCTGTTGTATTCTGG+GGG - chr8_2:21446640-21446659 None:intergenic 45.0%
GAGGAACCTGTTGTATTCTG+GGG - chr8_2:21446641-21446660 None:intergenic 45.0%
GAGAGGAACCTGTTGTATTC+TGG - chr8_2:21446643-21446662 None:intergenic 45.0%
! TTCTCGTGTCTTGATAGCCT+CGG - chr8_2:21446679-21446698 None:intergenic 45.0%
GGGAGAAACGGTTATTCAAC+GGG - chr8_2:21446834-21446853 None:intergenic 45.0%
GGGGAGAAACGGTTATTCAA+CGG - chr8_2:21446835-21446854 None:intergenic 45.0%
AACCGTTTCTCCCCCATTAA+AGG + chr8_2:21446841-21446860 Msa1239580:intron 45.0%
CGATAACACGAGAATTGTGG+GGG - chr8_2:21447416-21447435 None:intergenic 45.0%
GCGATAACACGAGAATTGTG+GGG - chr8_2:21447417-21447436 None:intergenic 45.0%
CAGCGATAACACGAGAATTG+TGG - chr8_2:21447419-21447438 None:intergenic 45.0%
TATCGCTGTGTTGCGCATTT+AGG + chr8_2:21447431-21447450 Msa1239580:intron 45.0%
ACAACCATACACCACCCATA+AGG + chr8_2:21447558-21447577 Msa1239580:intron 45.0%
CAACCATACACCACCCATAA+GGG + chr8_2:21447559-21447578 Msa1239580:intron 45.0%
TTACCATAAGCCCTTATGGG+TGG - chr8_2:21447572-21447591 None:intergenic 45.0%
GGGAACCCAACCTTTATGAT+TGG - chr8_2:21447754-21447773 None:intergenic 45.0%
CGGGAGGAAATTGAAGGAAA+TGG - chr8_2:21447806-21447825 None:intergenic 45.0%
TTTCCTTCAATTTCCTCCCG+GGG + chr8_2:21447806-21447825 Msa1239580:intron 45.0%
TTACCTCCTACACTTCTGTG+GGG - chr8_2:21448986-21449005 Msa1239590:CDS 45.0%
CTTTACCTCCTACACTTCTG+TGG - chr8_2:21448988-21449007 Msa1239590:CDS 45.0%
! CACAGAAGTGTAGGAGGTAA+AGG + chr8_2:21448986-21449005 Msa1239580:intron 45.0%
TCTCTTTGCACAGATGTGTC+TGG + chr8_2:21449013-21449032 Msa1239580:intron 45.0%
AAAATGGGTGATAGACTCGG+GGG - chr8_2:21449042-21449061 Msa1239590:CDS 45.0%
TGCTATGTGTGTGGAAAGGT+AGG - chr8_2:21449215-21449234 Msa1239590:CDS 45.0%
AGGTTGCTATGTGTGTGGAA+AGG - chr8_2:21449219-21449238 Msa1239590:CDS 45.0%
ACATAGCAACCTCCTAGGTT+TGG + chr8_2:21449227-21449246 Msa1239580:intron 45.0%
AGTTGCAAGAGGCAAAGCTT+TGG - chr8_2:21449348-21449367 Msa1239590:CDS 45.0%
AAGGAATGCGAAGTTGCAAG+AGG - chr8_2:21449359-21449378 Msa1239590:CDS 45.0%
TCTCCGCCTTCAATTCTTCA+AGG + chr8_2:21449531-21449550 Msa1239580:intron 45.0%
GTGGCAAATGAAAGAGGACA+AGG - chr8_2:21449591-21449610 Msa1239590:CDS 45.0%
TCTACGGTGGCAAATGAAAG+AGG - chr8_2:21449597-21449616 Msa1239590:CDS 45.0%
GAATGTCAAGTACACTGCTG+AGG - chr8_2:21449654-21449673 Msa1239590:CDS 45.0%
CGATGTCTACTGTTCCTACA+AGG - chr8_2:21449702-21449721 Msa1239590:CDS 45.0%
! ATGGACAGAATTTTCGGCGT+TGG - chr8_2:21449889-21449908 Msa1239590:CDS 45.0%
TTTGCATAGGTGACTACTGC+CGG + chr8_2:21449944-21449963 Msa1239580:intron 45.0%
! AGATTGTTGTTGCGGATGAC+CGG + chr8_2:21450053-21450072 Msa1239580:intron 45.0%
AGGAACCTGTTGTATTCTGG+GGG - chr8_2:21446640-21446659 None:intergenic 45.0%
GAGGAACCTGTTGTATTCTG+GGG - chr8_2:21446641-21446660 None:intergenic 45.0%
GAGAGGAACCTGTTGTATTC+TGG - chr8_2:21446643-21446662 None:intergenic 45.0%
! TTCTCGTGTCTTGATAGCCT+CGG - chr8_2:21446679-21446698 None:intergenic 45.0%
GGGAGAAACGGTTATTCAAC+GGG - chr8_2:21446834-21446853 None:intergenic 45.0%
GGGGAGAAACGGTTATTCAA+CGG - chr8_2:21446835-21446854 None:intergenic 45.0%
AACCGTTTCTCCCCCATTAA+AGG + chr8_2:21446841-21446860 Msa1239580:intron 45.0%
TGCATTATAGGTTAGGGGCA+GGG + chr8_2:21450871-21450890 Msa1239580:intron 45.0%
!! TCACTGTTGATGGCGAGAAA+TGG + chr8_2:21451017-21451036 Msa1239580:CDS 45.0%
ACTGAACTTGACAGCATCTG+TGG + chr8_2:21451435-21451454 Msa1239580:CDS 45.0%
AAGACAGACAGGTCAACACA+TGG - chr8_2:21451773-21451792 None:intergenic 45.0%
TGTTGACCTGTCTGTCTTAG+CGG + chr8_2:21451775-21451794 Msa1239580:intron 45.0%
TATGAACCGCTAAGACAGAC+AGG - chr8_2:21451784-21451803 None:intergenic 45.0%
!! GCAGCTTTTTCTTGTACTGC+AGG - chr8_2:21452004-21452023 None:intergenic 45.0%
GAGTTTCAGTGAGAACTGCA+TGG - chr8_2:21452126-21452145 None:intergenic 45.0%
GCTGATGACACATTACCAGA+TGG + chr8_2:21452293-21452312 Msa1239580:intron 45.0%
ATCAACCTTATGCAATGGGG+AGG + chr8_2:21452347-21452366 Msa1239580:CDS 45.0%
TTCATCCTCCCCATTGCATA+AGG - chr8_2:21452355-21452374 None:intergenic 45.0%
TTCATCCCTAAGGACATACG+GGG - chr8_2:21452616-21452635 None:intergenic 45.0%
!!! AATAAATCTATTTATTTTAT+TGG + chr8_2:21447987-21448006 Msa1239580:intron 5.0%
! GGTGATGACTTGCGGGTTTA+GGG - chr8_2:21445472-21445491 None:intergenic 50.0%
! AGGTGATGACTTGCGGGTTT+AGG - chr8_2:21445473-21445492 None:intergenic 50.0%
! TGGTGAAGGTGATGACTTGC+GGG - chr8_2:21445479-21445498 None:intergenic 50.0%
!! CATGATGGACGGAAATGGGA+TGG - chr8_2:21445499-21445518 None:intergenic 50.0%
CATCCCATTTCCGTCCATCA+TGG + chr8_2:21445497-21445516 Msa1239580:exon 50.0%
ACTGCAGCTGTATATGACCC+AGG - chr8_2:21445980-21445999 None:intergenic 50.0%
GTGACTACGTCACTGGACTA+AGG + chr8_2:21446590-21446609 Msa1239580:intron 50.0%
CAACTCCCCCAGAATACAAC+AGG + chr8_2:21446632-21446651 Msa1239580:intron 50.0%
ATACAACAGGTTCCTCTCGG+TGG + chr8_2:21446645-21446664 Msa1239580:intron 50.0%
ATGAAAACCAGACACGCGCA+CGG - chr8_2:21447457-21447476 None:intergenic 50.0%
GCCCCACTTGACACTCATAT+AGG + chr8_2:21447514-21447533 Msa1239580:intron 50.0%
AAGCCCTTATGGGTGGTGTA+TGG - chr8_2:21447565-21447584 None:intergenic 50.0%
ACACCACCCATAAGGGCTTA+TGG + chr8_2:21447566-21447585 Msa1239580:intron 50.0%
AAACCCCGGGAGGAAATTGA+AGG - chr8_2:21447812-21447831 None:intergenic 50.0%
!! GGAAAGGGTACTGTGATCAG+GGG - chr8_2:21448734-21448753 Msa1239590:CDS 50.0%
!! GGGAAAGGGTACTGTGATCA+GGG - chr8_2:21448735-21448754 Msa1239590:CDS 50.0%
!! TGGGAAAGGGTACTGTGATC+AGG - chr8_2:21448736-21448755 Msa1239590:CDS 50.0%
GCTCAAAGCCAAAGTCTTGC+CGG + chr8_2:21448878-21448897 Msa1239580:intron 50.0%
GCTTACTTCCGGCAAGACTT+TGG - chr8_2:21448889-21448908 Msa1239590:CDS 50.0%
ACTGCTGCAGTGAATGGCAA+AGG - chr8_2:21448927-21448946 Msa1239590:CDS 50.0%
TCACGAACTGCTGCAGTGAA+TGG - chr8_2:21448933-21448952 Msa1239590:CDS 50.0%
! ATCATCCCCCACAGAAGTGT+AGG + chr8_2:21448977-21448996 Msa1239580:intron 50.0%
TACCTCCTACACTTCTGTGG+GGG - chr8_2:21448985-21449004 Msa1239590:CDS 50.0%
CTAGGAGGTTGCTATGTGTG+TGG - chr8_2:21449224-21449243 Msa1239590:CDS 50.0%
CACACACATAGCAACCTCCT+AGG + chr8_2:21449222-21449241 Msa1239580:intron 50.0%
CATTGAAGACGTCAGCCGAA+AGG - chr8_2:21449378-21449397 Msa1239590:CDS 50.0%
CACCAGCAACAAACGCATCT+GGG + chr8_2:21449498-21449517 Msa1239580:intron 50.0%
CAACAAACGCATCTGGGAGT+TGG + chr8_2:21449504-21449523 Msa1239580:intron 50.0%
! TGTTGCTTCTGCTCTTACGG+AGG - chr8_2:21449831-21449850 Msa1239590:CDS 50.0%
!! CGGTGTTGCTTCTGCTCTTA+CGG - chr8_2:21449834-21449853 Msa1239590:CDS 50.0%
TAAGAGCAGAAGCAACACCG+TGG + chr8_2:21449834-21449853 Msa1239580:intron 50.0%
TGTTGCTACTGTTCCTCCTC+CGG - chr8_2:21449966-21449985 Msa1239590:CDS 50.0%
AGGAACAGTAGCAACAGCCA+GGG + chr8_2:21449970-21449989 Msa1239580:intron 50.0%
GAATGTCACAGACTCTACCC+TGG - chr8_2:21449990-21450009 Msa1239590:CDS 50.0%
GTGACTACGTCACTGGACTA+AGG + chr8_2:21446590-21446609 Msa1239580:intron 50.0%
CAACTCCCCCAGAATACAAC+AGG + chr8_2:21446632-21446651 Msa1239580:intron 50.0%
ATACAACAGGTTCCTCTCGG+TGG + chr8_2:21446645-21446664 Msa1239580:intron 50.0%
AATGCACAACATGCTGGCAG+AGG + chr8_2:21450754-21450773 Msa1239580:intron 50.0%
ATGCACAACATGCTGGCAGA+GGG + chr8_2:21450755-21450774 Msa1239580:intron 50.0%
GGCAGAGGGACAAAATGTCT+AGG + chr8_2:21450769-21450788 Msa1239580:intron 50.0%
GTGCATTATAGGTTAGGGGC+AGG + chr8_2:21450870-21450889 Msa1239580:intron 50.0%
GCATTATAGGTTAGGGGCAG+GGG + chr8_2:21450872-21450891 Msa1239580:intron 50.0%
ATTGCTGGGAAAGACACGAC+AGG + chr8_2:21451938-21451957 Msa1239580:intron 50.0%
ACTCTATCCTGCACTTCCTG+TGG + chr8_2:21452150-21452169 Msa1239580:intron 50.0%
CTCTATCCTGCACTTCCTGT+GGG + chr8_2:21452151-21452170 Msa1239580:intron 50.0%
! CATATGGGGTGATGATGCAG+AGG + chr8_2:21452378-21452397 Msa1239580:CDS 50.0%
TCATCCCTAAGGACATACGG+GGG - chr8_2:21452615-21452634 None:intergenic 50.0%
AGCTGGTGATCTATCAGCGT+TGG - chr8_2:21452738-21452757 None:intergenic 50.0%
ACCAGCTCATCCGTAAGATG+AGG + chr8_2:21452751-21452770 Msa1239580:intron 50.0%
TCCTCATCTTACGGATGAGC+TGG - chr8_2:21452755-21452774 None:intergenic 50.0%
!! TGGTAATGGAGGTTCTAGGG+TGG - chr8_2:21452826-21452845 None:intergenic 50.0%
GGACGGAAATGGGATGGTGA+AGG - chr8_2:21445493-21445512 None:intergenic 55.0%
TCGGTACGATTACCACCGAG+AGG - chr8_2:21446660-21446679 None:intergenic 55.0%
TCTCGGTGGTAATCGTACCG+AGG + chr8_2:21446659-21446678 Msa1239580:intron 55.0%
TCGTAGACAAAAACCCCGGG+AGG - chr8_2:21447822-21447841 None:intergenic 55.0%
! ATCCCCCACAGAAGTGTAGG+AGG + chr8_2:21448980-21448999 Msa1239580:intron 55.0%
! AAAACAATGCGCGCCGACAG+AGG - chr8_2:21449304-21449323 Msa1239590:CDS 55.0%
! TCTGTCGGCGCGCATTGTTT+TGG + chr8_2:21449303-21449322 Msa1239580:intron 55.0%
GCACCAGCAACAAACGCATC+TGG + chr8_2:21449497-21449516 Msa1239580:intron 55.0%
! CTCCCAGATGCGTTTGTTGC+TGG - chr8_2:21449503-21449522 Msa1239590:CDS 55.0%
GAGGAACAGTAGCAACAGCC+AGG + chr8_2:21449969-21449988 Msa1239580:intron 55.0%
TCGGTACGATTACCACCGAG+AGG - chr8_2:21446660-21446679 None:intergenic 55.0%
TCTCGGTGGTAATCGTACCG+AGG + chr8_2:21446659-21446678 Msa1239580:intron 55.0%
TTATAGGTTAGGGGCAGGGG+CGG + chr8_2:21450875-21450894 Msa1239580:intron 55.0%
ATCCTGCACTTCCTGTGGGA+AGG + chr8_2:21452155-21452174 Msa1239580:intron 55.0%
CATCCCTAAGGACATACGGG+GGG - chr8_2:21452614-21452633 None:intergenic 55.0%
CAGTGACGTAGTCACGCCTC+AGG - chr8_2:21446585-21446604 None:intergenic 60.0%
CTGAGGCGTGACTACGTCAC+TGG + chr8_2:21446583-21446602 Msa1239580:intron 60.0%
GGGGGAGTTGCGCAATTCTG+CGG - chr8_2:21446622-21446641 None:intergenic 60.0%
! TTGTGGGGGTGTGATGCGAG+TGG - chr8_2:21447402-21447421 None:intergenic 60.0%
ATTTAGGCCGTGCGCGTGTC+TGG + chr8_2:21447447-21447466 Msa1239580:intron 60.0%
CGCTTGCATGAGACTGTGGC+GGG - chr8_2:21447494-21447513 None:intergenic 60.0%
CCGCTTGCATGAGACTGTGG+CGG - chr8_2:21447495-21447514 None:intergenic 60.0%
CCGCCACAGTCTCATGCAAG+CGG + chr8_2:21447492-21447511 Msa1239580:intron 60.0%
! TGCGTTTGTTGCTGGTGCGC+TGG - chr8_2:21449495-21449514 Msa1239590:CDS 60.0%
GCATAGGTGACTACTGCCGG+AGG + chr8_2:21449947-21449966 Msa1239580:intron 60.0%
TAGGTGACTACTGCCGGAGG+AGG + chr8_2:21449950-21449969 Msa1239580:intron 60.0%
CAGTGACGTAGTCACGCCTC+AGG - chr8_2:21446585-21446604 None:intergenic 60.0%
CTGAGGCGTGACTACGTCAC+TGG + chr8_2:21446583-21446602 Msa1239580:intron 60.0%
GGGGGAGTTGCGCAATTCTG+CGG - chr8_2:21446622-21446641 None:intergenic 60.0%
GCGAGAAATGGCGCGAGCAA+AGG + chr8_2:21451029-21451048 Msa1239580:CDS 60.0%
CGACAGGCGCTACGCTTTCT+TGG + chr8_2:21451954-21451973 Msa1239580:intron 60.0%
! AGCCTTCCCACAGGAAGTGC+AGG - chr8_2:21452160-21452179 None:intergenic 60.0%
ACGACCCCCCGTATGTCCTT+AGG + chr8_2:21452607-21452626 Msa1239580:intron 60.0%
CGACCCCCCGTATGTCCTTA+GGG + chr8_2:21452608-21452627 Msa1239580:intron 60.0%
GGGCCGCTTGCATGAGACTG+TGG - chr8_2:21447498-21447517 None:intergenic 65.0%
GGGGCAGGGGCGGTTCACAT+AGG + chr8_2:21450885-21450904 Msa1239580:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 21445455 21452965 21445455 ID=Msa1239580;Name=Msa1239580
chr8_2 mRNA 21445455 21452965 21445455 ID=Msa1239580-mRNA-1;Parent=Msa1239580;Name=Msa1239580-mRNA-1;_AED=0.15;_eAED=0.16;_QI=61|0.4|0.5|1|0.8|1|6|0|385
chr8_2 exon 21445455 21445821 21445455 ID=Msa1239580-mRNA-1:exon:7675;Parent=Msa1239580-mRNA-1
chr8_2 exon 21450968 21451183 21450968 ID=Msa1239580-mRNA-1:exon:7676;Parent=Msa1239580-mRNA-1
chr8_2 exon 21451384 21451674 21451384 ID=Msa1239580-mRNA-1:exon:7677;Parent=Msa1239580-mRNA-1
chr8_2 exon 21451998 21452168 21451998 ID=Msa1239580-mRNA-1:exon:7678;Parent=Msa1239580-mRNA-1
chr8_2 exon 21452322 21452477 21452322 ID=Msa1239580-mRNA-1:exon:7679;Parent=Msa1239580-mRNA-1
chr8_2 exon 21452948 21452965 21452948 ID=Msa1239580-mRNA-1:exon:7680;Parent=Msa1239580-mRNA-1
chr8_2 five_prime_UTR 21445455 21445515 21445455 ID=Msa1239580-mRNA-1:five_prime_utr;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21445516 21445821 21445516 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21450968 21451183 21450968 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21451384 21451674 21451384 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21451998 21452168 21451998 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21452322 21452477 21452322 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
chr8_2 CDS 21452948 21452965 21452948 ID=Msa1239580-mRNA-1:cds;Parent=Msa1239580-mRNA-1
Gene Sequence

>Msa1239580

ATGGATTTTCTATCAAATCCTTTTGTTTTTGCAGCTTTGTCTGCATCTTTAACTCTTTTGATAGTTCAATTTCTGTTCAGAAAATTGAACTACAAAAGCAATAACATGAAGAAGAAGTATCATCCTGTTGCTGGCACAGTATTCAATCAGATGATGAACTTCAACAGACTTCATCATTATATGACTGATCTTGCAAGGAAGTACAAAACATACAGGCTACTTAACCCTTTCAGAAGTGAAGTTTATACTTCAGAACCAAGTAATGTTGAGTATATACTCAAAACCAATTTTGAGAACTATGGAAAGGGGTTGTACAACTACCAAAATTTGAAGGATTTACTAGGAGATGGAATTTTCACTGTTGATGGCGAGAAATGGCGCGAGCAAAGGAAGATATCAAGTCATGAGTTCTCCACCAAGATGTTAAGGGACTTTAGTACTTCAATATTCAGAAAAAATGCAGCAAAAGTTGCAAATATAGTGTCAGAAGCAGCAAATTCTAATACTAAGTTAGAAATTCAAGATCTTTTCATGAAATCAACATTGGATTCAATTTTCAAAGTTGCATTTGGAACTGAACTTGACAGCATCTGTGGAACAAGTGAAGAAGGGAAGAATTTTGCCAATGCTTTTGATACTGCAAGTGCGTTAACGCTTTATCGTTATGTTGATGTCTTTTGGAAGATAAAGAAGTTTCTCAACATTGGATCAGAGGCAGCATTAAGAAACAACACTGAAATCTTAAATGAATTTGTCATTAAGCTAATCAACACTAGAATTCAACAAATGAAGAAATCAAAGGGTGATTCTGCTTACCCTGCAGTACAAGAAAAAGCTGCACAAGAAGTGAGAGAAGCAACAAACACAAAAACAGTTAGAAGCTGCGCTGAGTTTGTTTCAAGAGTAACTGATGAAGCTATTGAAAAGATGAATTATGTCCATGCAGTTCTCACTGAAACTCTCAGACTCTATCCTGCACTTCCTTGTAAAAAAGGAGACATGGTGTCATATCAACCTTATGCAATGGGGAGGATGAAATTCATATGGGGTGATGATGCAGAGGAATTCAGACCTGAAAGATGGCTTGATGAAAATGGCATTTTTCAGCCAGAAAGCCCTTTCAAGTTTATGGCTTTTCAGGTCCTCAGATATGCCTAG

Protein sequence

>Msa1239580

MDFLSNPFVFAALSASLTLLIVQFLFRKLNYKSNNMKKKYHPVAGTVFNQMMNFNRLHHYMTDLARKYKTYRLLNPFRSEVYTSEPSNVEYILKTNFENYGKGLYNYQNLKDLLGDGIFTVDGEKWREQRKISSHEFSTKMLRDFSTSIFRKNAAKVANIVSEAANSNTKLEIQDLFMKSTLDSIFKVAFGTELDSICGTSEEGKNFANAFDTASALTLYRYVDVFWKIKKFLNIGSEAALRNNTEILNEFVIKLINTRIQQMKKSKGDSAYPAVQEKAAQEVREATNTKTVRSCAEFVSRVTDEAIEKMNYVHAVLTETLRLYPALPCKKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFMAFQVLRYA*