AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1241060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241060 MtrunA17_Chr8g0353621 87.454 271 2 1 1 239 1 271 2.06e-173 478
Msa1241060 MtrunA17_Chr8g0351491 76.384 271 32 1 2 240 8 278 7.92e-152 423
Msa1241060 MtrunA17_Chr3g0140631 57.836 268 81 1 3 238 30 297 1.35e-112 325
Msa1241060 MtrunA17_Chr3g0125381 72.093 215 25 2 59 238 1 215 8.44e-106 304
Msa1241060 MtrunA17_Chr2g0304111 28.736 261 146 4 10 232 23 281 9.57e-38 137
Msa1241060 MtrunA17_Chr5g0441011 28.736 261 146 4 10 232 13 271 4.97e-37 134
Msa1241060 MtrunA17_Chr1g0173541 30.798 263 141 5 7 229 49 310 6.35e-37 135
Msa1241060 MtrunA17_Chr4g0013131 30.370 270 147 6 1 231 1 268 1.36e-36 134
Msa1241060 MtrunA17_Chr7g0274941 30.798 263 143 5 10 233 16 278 1.73e-36 130
Msa1241060 MtrunA17_Chr1g0170281 31.538 260 137 5 10 229 118 376 2.62e-36 134
Msa1241060 MtrunA17_Chr4g0001331 31.939 263 140 6 3 228 13 273 6.48e-36 132
Msa1241060 MtrunA17_Chr7g0257751 31.034 261 139 5 10 230 58 317 1.27e-35 132
Msa1241060 MtrunA17_Chr1g0200601 31.298 262 139 5 12 233 32 292 5.79e-35 130
Msa1241060 MtrunA17_Chr5g0441691 30.769 260 139 5 10 229 68 326 8.56e-35 130
Msa1241060 MtrunA17_Chr4g0063881 29.389 262 147 4 7 232 8 267 9.26e-35 129
Msa1241060 MtrunA17_Chr1g0205421 33.591 259 133 5 7 228 9 265 1.35e-34 128
Msa1241060 MtrunA17_Chr4g0059951 31.111 270 143 7 7 235 69 336 1.46e-34 129
Msa1241060 MtrunA17_Chr2g0284011 29.615 260 144 5 10 232 12 269 2.66e-34 127
Msa1241060 MtrunA17_Chr7g0244521 29.658 263 146 5 10 235 12 272 3.54e-34 127
Msa1241060 MtrunA17_Chr1g0150321 30.597 268 140 6 10 239 13 272 5.08e-34 126
Msa1241060 MtrunA17_Chr8g0385281 30.741 270 142 5 7 235 2 267 9.07e-34 124
Msa1241060 MtrunA17_Chr2g0302431 28.794 257 143 4 10 228 20 274 9.40e-34 126
Msa1241060 MtrunA17_Chr6g0453681 28.794 257 146 4 7 228 16 270 1.23e-33 126
Msa1241060 MtrunA17_Chr6g0468751 28.409 264 152 4 7 235 16 277 1.27e-33 126
Msa1241060 MtrunA17_Chr8g0385341 30.038 263 143 5 10 232 30 291 2.13e-33 125
Msa1241060 MtrunA17_Chr4g0074811 30.000 260 141 5 10 229 91 349 2.36e-33 126
Msa1241060 MtrunA17_Chr3g0098951 28.302 265 148 6 10 234 84 346 2.77e-33 125
Msa1241060 MtrunA17_Chr1g0176421 29.434 265 145 6 6 229 156 419 3.43e-33 126
Msa1241060 MtrunA17_Chr5g0444171 27.547 265 151 5 10 234 92 355 4.88e-33 125
Msa1241060 MtrunA17_Chr4g0055451 29.924 264 140 5 10 232 5 264 2.51e-32 120
Msa1241060 MtrunA17_Chr5g0428031 27.863 262 151 4 7 232 6 265 2.67e-32 122
Msa1241060 MtrunA17_Chr0c02g0489761 30.385 260 140 5 10 229 78 336 3.06e-32 123
Msa1241060 MtrunA17_Chr8g0345801 29.200 250 136 5 7 216 12 260 4.81e-32 118
Msa1241060 MtrunA17_Chr8g0387671 30.769 260 139 5 10 229 66 324 7.17e-32 122
Msa1241060 MtrunA17_Chr6g0478601 28.223 287 139 4 6 225 107 393 8.11e-32 121
Msa1241060 MtrunA17_Chr5g0448721 30.303 264 143 6 10 233 96 358 8.67e-32 122
Msa1241060 MtrunA17_Chr5g0432491 28.352 261 147 4 10 232 23 281 9.00e-32 120
Msa1241060 MtrunA17_Chr7g0245031 29.057 265 147 4 3 228 141 403 9.17e-32 121
Msa1241060 MtrunA17_Chr3g0114511 31.923 260 140 5 7 231 29 286 1.01e-31 120
Msa1241060 MtrunA17_Chr3g0131061 29.259 270 146 5 7 235 1 266 1.05e-31 119
Msa1241060 MtrunA17_Chr3g0132671 27.526 287 141 6 7 228 16 300 1.34e-31 121
Msa1241060 MtrunA17_Chr8g0346071 25.670 261 156 4 7 231 14 272 1.53e-31 120
Msa1241060 MtrunA17_Chr2g0284031 30.000 260 143 5 10 232 31 288 2.35e-31 120
Msa1241060 MtrunA17_Chr2g0277501 28.839 267 145 5 10 235 4 266 4.88e-31 117
Msa1241060 MtrunA17_Chr1g0157131 28.626 262 146 5 8 229 72 332 6.01e-31 119
Msa1241060 MtrunA17_Chr4g0033371 29.231 260 143 5 10 229 72 330 6.52e-31 119
Msa1241060 MtrunA17_Chr3g0131181 30.038 263 143 5 10 232 29 290 6.93e-31 119
Msa1241060 MtrunA17_Chr8g0374571 28.030 264 145 5 10 232 23 282 1.06e-30 116
Msa1241060 MtrunA17_Chr1g0190131 27.068 266 156 5 10 238 9 273 1.32e-30 114
Msa1241060 MtrunA17_Chr1g0203881 28.846 260 144 5 10 229 41 299 1.46e-30 118
Msa1241060 MtrunA17_Chr1g0162301 29.545 264 141 5 10 232 24 283 1.54e-30 116
Msa1241060 MtrunA17_Chr4g0045371 29.167 264 142 5 10 232 23 282 1.61e-30 116
Msa1241060 MtrunA17_Chr1g0176751 30.268 261 141 5 10 230 124 383 1.84e-30 118
Msa1241060 MtrunA17_Chr8g0381821 29.167 264 142 5 10 232 4 263 2.33e-30 115
Msa1241060 MtrunA17_Chr3g0107011 29.730 259 137 7 10 228 14 267 3.26e-30 116
Msa1241060 MtrunA17_Chr2g0333821 31.559 263 141 6 3 228 7 267 3.56e-30 116
Msa1241060 MtrunA17_Chr3g0123791 30.153 262 138 5 10 230 5 262 4.05e-30 114
Msa1241060 MtrunA17_Chr4g0008561 29.389 262 145 6 7 229 16 276 4.22e-30 117
Msa1241060 MtrunA17_Chr5g0428981 27.622 286 141 4 6 225 759 1044 4.86e-30 117
Msa1241060 MtrunA17_Chr7g0267771 28.077 260 146 5 10 229 88 346 5.10e-30 116
Msa1241060 MtrunA17_Chr5g0399911 28.623 276 147 5 10 235 6 281 5.11e-30 114
Msa1241060 MtrunA17_Chr4g0018201 27.622 286 141 4 6 225 755 1040 7.47e-30 117
Msa1241060 MtrunA17_Chr4g0059751 28.571 266 142 5 9 228 88 351 1.26e-29 114
Msa1241060 MtrunA17_Chr7g0256001 28.889 270 147 7 7 232 138 406 1.47e-29 115
Msa1241060 MtrunA17_Chr7g0244561 28.682 258 143 5 10 228 16 271 2.33e-29 114
Msa1241060 MtrunA17_Chr5g0426521 28.205 273 145 6 1 232 1 263 3.23e-29 112
Msa1241060 MtrunA17_Chr4g0045261 29.670 273 146 8 10 238 137 407 4.35e-29 114
Msa1241060 MtrunA17_Chr7g0267751 28.077 260 146 5 10 229 135 393 5.50e-29 114
Msa1241060 MtrunA17_Chr8g0346081 24.521 261 159 4 7 231 14 272 5.87e-29 113
Msa1241060 MtrunA17_Chr8g0379091 28.958 259 140 7 10 228 26 280 1.81e-28 112
Msa1241060 MtrunA17_Chr5g0432471 27.099 262 152 5 10 234 12 271 1.86e-28 112
Msa1241060 MtrunA17_Chr3g0132591 29.104 268 144 7 1 230 102 361 2.80e-28 111
Msa1241060 MtrunA17_Chr4g0069301 27.715 267 153 4 7 235 23 287 3.68e-28 110
Msa1241060 MtrunA17_Chr5g0397101 30.769 260 139 5 10 229 67 325 1.05e-27 110
Msa1241060 MtrunA17_Chr7g0242561 28.409 264 147 6 12 235 58 319 1.84e-27 109
Msa1241060 MtrunA17_Chr6g0453671 27.132 258 151 4 6 228 15 270 3.51e-27 107
Msa1241060 MtrunA17_Chr5g0402551 28.788 264 143 7 10 229 134 396 3.69e-27 108
Msa1241060 MtrunA17_Chr3g0107051 25.670 261 153 5 10 232 21 278 3.40e-26 105
Msa1241060 MtrunA17_Chr3g0127571 26.394 269 153 7 10 234 138 405 3.46e-26 106
Msa1241060 MtrunA17_Chr5g0402661 26.515 264 149 5 10 232 18 277 5.74e-26 103
Msa1241060 MtrunA17_Chr1g0166101 27.652 264 151 5 7 232 21 282 6.50e-26 104
Msa1241060 MtrunA17_Chr8g0374701 27.612 268 144 8 10 229 125 390 1.33e-25 104
Msa1241060 MtrunA17_Chr1g0188031 27.820 266 150 7 7 232 17 280 1.17e-24 101
Msa1241060 MtrunA17_Chr7g0276111 25.758 264 151 8 10 229 144 406 1.95e-24 101
Msa1241060 MtrunA17_Chr3g0129721 27.519 258 138 7 16 229 31 283 2.55e-24 98.2
Msa1241060 MtrunA17_Chr5g0405421 28.244 262 145 7 10 229 99 359 4.98e-24 100
Msa1241060 MtrunA17_Chr1g0170551 27.027 259 150 6 6 229 3 257 9.62e-24 99.8
Msa1241060 MtrunA17_Chr8g0380661 25.670 261 152 6 10 232 4 260 1.17e-23 97.1
Msa1241060 MtrunA17_Chr4g0074111 28.293 205 110 4 10 177 18 222 1.84e-23 97.4
Msa1241060 MtrunA17_Chr4g0074791 26.792 265 144 7 10 229 95 354 2.65e-23 97.8
Msa1241060 MtrunA17_Chr4g0055431 26.984 252 139 5 22 232 23 270 2.85e-23 95.9
Msa1241060 MtrunA17_Chr1g0197721 26.068 234 128 2 5 193 46 279 3.95e-23 97.4
Msa1241060 MtrunA17_Chr4g0030361 28.873 284 137 5 10 228 309 592 4.07e-23 97.4
Msa1241060 MtrunA17_Chr3g0091281 29.565 230 126 4 2 195 4 233 1.09e-22 92.8
Msa1241060 MtrunA17_Chr1g0153321 27.184 309 140 7 3 228 101 407 1.16e-22 95.9
Msa1241060 MtrunA17_Chr5g0419441 26.471 272 149 7 3 231 232 495 4.08e-22 94.7
Msa1241060 MtrunA17_Chr2g0286501 28.148 270 140 6 1 226 40 299 5.10e-22 94.7
Msa1241060 MtrunA17_Chr3g0125371 77.778 54 5 1 3 49 7 60 6.97e-22 85.5
Msa1241060 MtrunA17_Chr7g0272841 26.718 262 148 6 13 230 71 332 1.54e-21 93.2
Msa1241060 MtrunA17_Chr7g0261491 25.784 287 136 5 7 216 117 403 3.01e-21 92.0
Msa1241060 MtrunA17_Chr1g0183651 25.784 287 136 5 7 216 117 403 4.67e-21 91.7
Msa1241060 MtrunA17_Chr3g0091311 33.511 188 86 4 1 150 1 187 4.85e-21 88.6
Msa1241060 MtrunA17_Chr8g0355131 30.198 202 102 3 67 229 105 306 5.32e-21 91.3
Msa1241060 MtrunA17_Chr3g0091421 29.333 225 123 4 7 195 9 233 5.54e-21 88.2
Msa1241060 MtrunA17_Chr3g0130151 30.350 257 136 9 13 229 247 500 1.87e-20 89.7
Msa1241060 MtrunA17_Chr1g0202831 26.275 255 149 7 13 229 414 667 3.75e-20 89.0
Msa1241060 MtrunA17_Chr4g0038501 25.769 260 152 6 8 229 18 274 4.54e-20 89.0
Msa1241060 MtrunA17_Chr4g0000481 26.070 257 150 8 16 234 90 344 1.10e-19 86.7
Msa1241060 MtrunA17_Chr8g0384301 30.739 257 135 9 13 229 302 555 1.51e-19 87.4
Msa1241060 MtrunA17_Chr4g0038091 25.094 267 158 7 8 236 18 280 4.51e-19 85.9
Msa1241060 MtrunA17_Chr2g0321101 48.889 90 46 0 129 218 320 409 9.25e-19 84.7
Msa1241060 MtrunA17_Chr2g0327561 27.273 308 141 6 6 234 624 927 9.97e-19 85.1
Msa1241060 MtrunA17_Chr1g0187581 24.752 303 146 7 8 229 115 416 1.03e-18 84.7
Msa1241060 MtrunA17_Chr3g0080101 41.346 104 57 1 129 228 647 750 1.18e-18 84.7
Msa1241060 MtrunA17_Chr7g0266031 41.346 104 57 1 129 228 722 825 1.61e-18 84.3
Msa1241060 MtrunA17_Chr8g0369091 26.897 290 138 5 10 228 599 885 1.85e-18 84.3
Msa1241060 MtrunA17_Chr1g0167351 25.083 303 144 7 8 228 108 409 3.36e-18 83.2
Msa1241060 MtrunA17_Chr1g0179101 40.385 104 58 1 129 228 700 803 5.00e-18 82.8
Msa1241060 MtrunA17_Chr8g0386981 25.098 255 152 7 13 229 411 664 6.59e-18 82.4
Msa1241060 MtrunA17_Chr2g0326531 24.812 266 154 6 16 237 125 388 2.85e-17 80.1
Msa1241060 MtrunA17_Chr2g0329011 25.649 308 140 11 3 226 10 312 1.12e-16 78.2
Msa1241060 MtrunA17_Chr8g0338741 39.252 107 58 2 125 229 242 343 1.57e-16 78.2
Msa1241060 MtrunA17_Chr6g0487231 25.843 267 147 7 11 231 70 331 1.71e-16 77.4
Msa1241060 MtrunA17_Chr4g0070851 27.731 238 125 6 37 229 97 332 2.51e-16 77.0
Msa1241060 MtrunA17_Chr6g0486661 35.625 160 77 7 83 228 867 1014 3.69e-16 77.4
Msa1241060 MtrunA17_Chr6g0449401 41.837 98 53 1 135 228 535 632 3.81e-16 77.4
Msa1241060 MtrunA17_Chr7g0227331 41.837 98 53 1 135 228 474 571 4.90e-16 77.0
Msa1241060 MtrunA17_Chr2g0285711 37.736 106 59 2 132 230 304 409 6.05e-16 76.3
Msa1241060 MtrunA17_Chr2g0290691 39.604 101 57 1 132 228 443 543 6.27e-16 76.6
Msa1241060 MtrunA17_Chr2g0309421 38.614 101 58 1 132 228 408 508 6.31e-16 76.6
Msa1241060 MtrunA17_Chr8g0356291 39.216 102 58 1 132 229 360 461 6.42e-16 76.6
Msa1241060 MtrunA17_Chr5g0444191 35.052 97 57 3 135 229 71 163 2.56e-15 72.4
Msa1241060 MtrunA17_Chr7g0234641 34.653 101 63 1 126 226 234 331 2.58e-15 74.7
Msa1241060 MtrunA17_Chr8g0335351 38.614 101 58 1 132 228 603 703 3.06e-15 74.7
Msa1241060 MtrunA17_Chr4g0032761 32.653 147 87 3 84 226 210 348 3.98e-15 73.9
Msa1241060 MtrunA17_Chr7g0250631 36.634 101 60 1 132 228 596 696 2.22e-14 72.0
Msa1241060 MtrunA17_Chr4g0063311 40.206 97 51 1 129 218 329 425 2.43e-14 71.6
Msa1241060 MtrunA17_Chr8g0381091 41.053 95 51 2 132 222 302 395 3.03e-14 71.6
Msa1241060 MtrunA17_Chr3g0135951 37.500 112 64 3 122 228 290 400 3.65e-14 71.2
Msa1241060 MtrunA17_Chr1g0173921 21.756 262 162 8 7 229 1 258 4.11e-14 71.2
Msa1241060 MtrunA17_Chr7g0258051 22.137 262 161 8 7 229 13 270 1.92e-13 69.3
Msa1241060 MtrunA17_Chr4g0072831 23.109 238 147 9 6 228 6 222 2.00e-12 65.5
Msa1241060 MtrunA17_Chr4g0025671 20.833 264 168 7 4 229 2 262 3.00e-12 65.9
Msa1241060 MtrunA17_Chr3g0091411 33.333 156 77 6 1 150 1 135 5.90e-12 63.5
Msa1241060 MtrunA17_Chr1g0167311 38.235 102 56 4 132 228 314 413 7.65e-12 64.3
Msa1241060 MtrunA17_Chr7g0218991 26.190 210 113 6 9 177 463 671 7.66e-12 64.7
Msa1241060 MtrunA17_Chr2g0312641 34.167 120 70 4 117 228 284 402 7.95e-12 64.3
Msa1241060 MtrunA17_Chr2g0299781 33.333 111 70 2 122 228 309 419 9.52e-12 64.3
Msa1241060 MtrunA17_Chr5g0444181 30.769 104 71 1 10 112 91 194 1.66e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1241060 AT2G45490.1 69.259 270 51 1 2 239 14 283 1.62e-140 395
Msa1241060 AT2G45490.2 68.880 241 43 1 2 210 14 254 2.07e-122 348
Msa1241060 AT2G25880.2 64.407 236 84 0 3 238 18 253 1.34e-118 338
Msa1241060 AT4G32830.1 56.716 268 84 1 3 238 24 291 1.19e-111 322
Msa1241060 AT2G25880.1 56.716 268 84 1 3 238 18 285 1.45e-111 322
Msa1241060 AT2G25880.4 56.716 268 84 1 3 238 31 298 2.15e-111 322
Msa1241060 AT2G25880.3 56.716 268 84 1 3 238 79 346 2.04e-110 322
Msa1241060 AT5G25110.1 33.206 262 136 5 10 234 43 302 7.56e-40 143
Msa1241060 AT1G30270.2 30.038 263 144 4 7 231 28 288 8.61e-39 140
Msa1241060 AT5G10930.1 32.567 261 136 6 10 232 12 270 8.63e-39 140
Msa1241060 AT1G30270.1 30.038 263 144 4 7 231 28 288 9.27e-39 140
Msa1241060 AT2G41860.2 30.855 269 145 5 10 238 54 321 8.38e-38 138
Msa1241060 AT2G41860.1 30.483 269 146 5 10 238 54 321 3.81e-37 137
Msa1241060 AT2G26980.1 30.303 264 144 4 7 232 11 272 3.91e-37 134
Msa1241060 AT2G26980.5 30.303 264 144 4 7 232 11 272 6.16e-37 134
Msa1241060 AT1G61950.1 31.034 261 138 5 10 229 98 357 6.41e-37 136
Msa1241060 AT2G26980.4 30.303 264 144 4 7 232 21 282 1.30e-36 134
Msa1241060 AT2G26980.3 30.303 264 144 4 7 232 11 272 1.37e-36 134
Msa1241060 AT4G04720.2 29.231 260 143 5 10 229 80 338 1.99e-36 135
Msa1241060 AT4G04720.1 29.231 260 143 5 10 229 80 338 1.99e-36 135
Msa1241060 AT3G57530.2 31.538 260 137 5 10 229 63 321 5.78e-36 132
Msa1241060 AT2G38910.1 30.502 259 139 5 10 228 134 391 1.08e-35 133
Msa1241060 AT2G25090.1 31.970 269 135 5 10 232 15 281 1.10e-35 132
Msa1241060 AT5G21326.1 29.924 264 145 4 7 232 10 271 1.73e-35 131
Msa1241060 AT1G74740.1 31.159 276 147 7 1 235 49 322 2.05e-35 132
Msa1241060 AT3G57530.1 31.538 260 137 5 10 229 63 321 2.09e-35 132
Msa1241060 AT3G01090.3 28.846 260 148 4 4 228 13 270 3.02e-35 131
Msa1241060 AT3G01090.1 28.846 260 148 4 4 228 13 270 3.02e-35 131
Msa1241060 AT3G01090.2 28.846 260 148 4 4 228 36 293 3.97e-35 131
Msa1241060 AT2G31500.1 31.579 266 140 6 10 235 66 329 4.52e-35 131
Msa1241060 AT2G26980.2 30.992 242 127 4 7 210 11 250 5.51e-35 126
Msa1241060 AT3G29160.3 28.077 260 150 4 4 228 14 271 8.69e-35 127
Msa1241060 AT5G19360.1 31.538 260 137 5 10 229 68 326 1.92e-34 129
Msa1241060 AT4G24400.2 28.626 262 149 4 7 232 6 265 1.97e-34 127
Msa1241060 AT1G50700.3 30.000 260 141 5 10 229 73 331 2.19e-34 128
Msa1241060 AT4G24400.1 28.626 262 149 4 7 232 6 265 2.67e-34 128
Msa1241060 AT5G39440.1 28.740 254 145 3 9 228 18 269 2.87e-34 128
Msa1241060 AT5G01810.3 29.615 260 144 5 10 232 12 269 3.20e-34 126
Msa1241060 AT1G50700.1 30.000 260 141 5 10 229 73 331 3.31e-34 129
Msa1241060 AT1G50700.2 30.000 260 141 5 10 229 73 331 4.48e-34 128
Msa1241060 AT3G20410.2 30.000 260 141 5 10 229 91 349 5.27e-34 128
Msa1241060 AT3G20410.1 30.000 260 141 5 10 229 91 349 5.27e-34 128
Msa1241060 AT1G01140.3 27.757 263 150 4 7 231 16 276 5.57e-34 127
Msa1241060 AT3G29160.1 28.235 255 146 4 9 228 19 271 6.18e-34 127
Msa1241060 AT3G29160.2 28.235 255 146 4 9 228 19 271 6.18e-34 127
Msa1241060 AT1G01140.1 27.757 263 150 4 7 231 16 276 6.49e-34 127
Msa1241060 AT5G01810.1 29.615 260 144 5 10 232 12 269 7.10e-34 126
Msa1241060 AT5G01810.2 29.615 260 144 5 10 232 12 269 7.10e-34 126
Msa1241060 AT5G12180.1 31.538 260 137 5 10 229 73 331 7.22e-34 127
Msa1241060 AT5G35410.2 26.744 258 151 4 7 228 8 263 7.62e-34 125
Msa1241060 AT1G18890.1 30.435 276 149 7 1 235 53 326 8.55e-34 127
Msa1241060 AT5G21222.1 28.358 268 151 5 3 232 7 271 1.48e-33 128
Msa1241060 AT5G21222.2 28.358 268 151 5 3 232 7 271 1.48e-33 128
Msa1241060 AT5G21222.4 28.358 268 151 5 3 232 7 271 1.48e-33 128
Msa1241060 AT5G21222.3 28.358 268 151 5 3 232 7 271 1.48e-33 128
Msa1241060 AT1G35670.1 31.274 259 137 5 12 230 28 285 1.73e-33 126
Msa1241060 AT5G19450.2 30.075 266 144 6 10 235 57 320 1.90e-33 126
Msa1241060 AT5G19450.1 30.075 266 144 6 10 235 57 320 1.90e-33 126
Msa1241060 AT4G21940.3 29.615 260 142 5 10 229 102 360 1.93e-33 126
Msa1241060 AT5G35410.1 26.744 258 151 4 7 228 8 263 2.19e-33 125
Msa1241060 AT1G01140.2 26.616 263 155 3 7 231 16 278 2.35e-33 125
Msa1241060 AT5G04870.1 30.385 260 140 5 10 229 150 408 2.54e-33 127
Msa1241060 AT4G21940.2 29.615 260 142 5 10 229 102 360 2.80e-33 126
Msa1241060 AT4G09570.1 31.660 259 136 5 12 230 27 284 2.86e-33 125
Msa1241060 AT5G45820.1 29.478 268 142 6 10 236 12 273 2.87e-33 125
Msa1241060 AT4G21940.1 29.615 260 142 5 10 229 102 360 3.01e-33 126
Msa1241060 AT4G38230.4 31.599 269 142 7 6 233 19 286 3.04e-33 125
Msa1241060 AT4G38230.3 31.599 269 142 7 6 233 19 286 3.04e-33 125
Msa1241060 AT4G38230.2 31.599 269 142 7 6 233 49 316 3.57e-33 125
Msa1241060 AT5G12480.1 29.502 261 143 5 10 230 59 318 9.30e-33 125
Msa1241060 AT4G35310.2 31.061 264 141 6 10 233 97 359 9.69e-33 125
Msa1241060 AT4G35310.1 31.061 264 141 6 10 233 97 359 9.69e-33 125
Msa1241060 AT2G17290.1 30.682 264 142 6 10 233 85 347 1.09e-32 124
Msa1241060 AT2G17290.2 30.682 264 142 6 10 233 85 347 1.09e-32 124
Msa1241060 AT3G10660.2 30.385 260 140 5 10 229 186 444 1.45e-32 125
Msa1241060 AT3G10660.1 30.385 260 140 5 10 229 186 444 1.45e-32 125
Msa1241060 AT2G35890.2 30.189 265 144 5 10 234 132 395 3.53e-32 123
Msa1241060 AT2G35890.1 30.189 265 144 5 10 234 132 395 3.53e-32 123
Msa1241060 AT4G18700.1 29.615 260 144 5 10 232 26 283 3.79e-32 122
Msa1241060 AT1G48490.4 29.181 281 138 4 6 225 825 1105 5.09e-32 124
Msa1241060 AT1G48490.3 29.181 281 138 4 6 225 824 1104 5.39e-32 124
Msa1241060 AT1G48490.2 29.181 281 138 4 6 225 824 1104 5.39e-32 124
Msa1241060 AT1G48490.1 29.181 281 138 4 6 225 824 1104 5.39e-32 124
Msa1241060 AT3G08730.1 29.389 262 143 5 6 228 130 388 6.09e-32 122
Msa1241060 AT3G08730.2 29.389 262 143 5 6 228 130 388 6.09e-32 122
Msa1241060 AT1G76040.3 29.231 260 143 5 10 229 112 370 6.95e-32 122
Msa1241060 AT1G76040.2 29.231 260 143 5 10 229 112 370 7.23e-32 122
Msa1241060 AT5G23580.1 28.679 265 148 5 8 232 20 283 1.16e-31 121
Msa1241060 AT2G30360.1 27.757 263 149 5 10 233 21 281 2.03e-31 120
Msa1241060 AT4G23650.1 30.769 260 139 5 10 229 78 336 3.52e-31 120
Msa1241060 AT4G33950.2 29.924 264 140 5 10 232 21 280 3.66e-31 117
Msa1241060 AT4G33950.1 29.924 264 140 5 10 232 21 280 4.47e-31 117
Msa1241060 AT4G30960.1 28.897 263 148 5 10 235 24 284 6.36e-31 119
Msa1241060 AT3G08720.1 29.502 261 142 5 7 228 137 394 6.65e-31 119
Msa1241060 AT3G08720.3 29.502 261 142 5 7 228 137 394 6.65e-31 119
Msa1241060 AT3G08720.4 29.502 261 142 5 7 228 137 394 6.65e-31 119
Msa1241060 AT3G08720.2 29.502 261 142 5 7 228 137 394 6.65e-31 119
Msa1241060 AT4G14580.1 27.925 265 150 5 7 232 18 280 9.13e-31 118
Msa1241060 AT5G08590.1 29.213 267 144 5 7 232 1 263 1.06e-30 116
Msa1241060 AT1G60940.1 29.630 270 145 5 7 235 1 266 1.22e-30 116
Msa1241060 AT1G60940.2 29.630 270 145 5 7 235 1 266 1.22e-30 116
Msa1241060 AT3G23000.1 26.894 264 153 5 7 232 22 283 1.56e-30 117
Msa1241060 AT1G48260.1 28.352 261 145 5 7 228 8 265 2.11e-30 117
Msa1241060 AT1G49580.1 30.418 263 138 7 11 229 151 412 2.25e-30 118
Msa1241060 AT1G78290.3 29.924 264 140 5 10 232 4 263 3.11e-30 115
Msa1241060 AT1G78290.2 29.924 264 140 5 10 232 4 263 3.11e-30 115
Msa1241060 AT5G63650.1 28.839 267 145 5 7 232 1 263 3.94e-30 115
Msa1241060 AT5G62310.1 28.929 280 132 4 6 218 750 1029 4.27e-30 118
Msa1241060 AT5G45810.1 28.788 264 147 6 7 232 25 285 4.60e-30 117
Msa1241060 AT1G10940.1 28.889 270 147 5 7 235 1 266 8.25e-30 114
Msa1241060 AT5G57630.1 27.778 252 146 5 7 224 9 258 8.72e-30 115
Msa1241060 AT3G51850.3 29.545 264 144 6 12 235 56 317 8.72e-30 115
Msa1241060 AT5G57630.2 27.778 252 146 5 7 224 9 258 9.03e-30 115
Msa1241060 AT3G17510.1 27.586 261 147 5 7 228 17 274 9.21e-30 115
Msa1241060 AT3G04530.1 27.372 274 159 7 1 234 1 274 1.02e-29 112
Msa1241060 AT5G66880.1 29.924 264 140 5 10 232 22 281 1.06e-29 114
Msa1241060 AT5G66880.2 29.924 264 140 5 10 232 22 281 1.06e-29 114
Msa1241060 AT2G34180.1 28.409 264 148 5 7 232 54 314 1.43e-29 115
Msa1241060 AT1G12680.1 28.462 260 141 6 8 230 105 356 1.55e-29 115
Msa1241060 AT3G51850.2 29.545 264 144 6 12 235 56 317 2.04e-29 115
Msa1241060 AT1G45160.1 28.374 289 141 5 6 228 666 954 2.20e-29 116
Msa1241060 AT1G45160.2 28.374 289 141 5 6 228 666 954 2.31e-29 116
Msa1241060 AT3G51850.1 29.545 264 144 6 12 235 56 317 2.79e-29 115
Msa1241060 AT1G29230.1 28.409 264 148 5 7 232 71 331 5.27e-29 114
Msa1241060 AT4G40010.1 29.545 264 141 6 10 232 4 263 6.29e-29 112
Msa1241060 AT4G04740.4 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.6 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.5 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.3 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.1 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.7 28.049 246 136 5 24 229 83 327 1.39e-28 113
Msa1241060 AT4G04740.2 28.049 246 136 5 24 229 83 327 1.48e-28 113
Msa1241060 AT5G04510.3 28.458 253 134 3 5 212 39 289 1.69e-28 110
Msa1241060 AT3G53930.2 28.244 262 148 6 7 229 17 277 1.85e-28 113
Msa1241060 AT3G53930.1 28.244 262 148 6 7 229 17 277 1.90e-28 113
Msa1241060 AT5G58380.1 26.538 260 150 5 10 231 12 268 2.06e-28 112
Msa1241060 AT3G61960.2 27.068 266 153 5 1 226 1 265 2.08e-28 113
Msa1241060 AT3G61960.1 26.766 269 156 5 1 229 1 268 2.30e-28 113
Msa1241060 AT5G04510.2 28.682 258 137 3 5 217 39 294 2.46e-28 111
Msa1241060 AT3G50530.1 29.304 273 147 8 10 238 148 418 2.90e-28 112
Msa1241060 AT3G17850.1 26.829 287 143 4 6 225 878 1164 3.33e-28 112
Msa1241060 AT5G04510.1 28.682 258 137 3 5 217 39 294 4.07e-28 111
Msa1241060 AT1G10940.2 28.417 278 146 6 7 235 1 274 4.07e-28 110
Msa1241060 AT3G50500.1 28.623 276 145 6 10 237 23 294 4.18e-28 110
Msa1241060 AT3G10540.1 28.682 258 137 3 5 217 40 295 4.55e-28 111
Msa1241060 AT5G07070.1 27.203 261 149 5 10 232 12 269 4.69e-28 111
Msa1241060 AT4G04710.2 27.612 268 143 7 10 233 36 296 2.18e-27 109
Msa1241060 AT3G19100.1 28.788 264 143 7 10 229 144 406 2.99e-27 109
Msa1241060 AT2G23030.1 28.839 267 145 5 10 235 4 266 3.13e-27 107
Msa1241060 AT1G12580.1 27.308 260 148 5 10 229 44 302 4.19e-27 108
Msa1241060 AT2G17890.1 29.008 262 143 6 10 229 108 368 1.44e-26 107
Msa1241060 AT2G37840.1 27.863 262 149 6 7 229 9 269 2.41e-26 107
Msa1241060 AT3G50500.2 27.915 283 145 7 10 237 23 301 2.50e-26 105
Msa1241060 AT4G04710.1 26.182 275 151 6 10 233 36 309 7.66e-26 105
Msa1241060 AT4G04710.4 26.182 275 151 6 10 233 36 309 8.37e-26 105
Msa1241060 AT3G56760.1 29.057 265 143 7 10 230 124 387 9.71e-26 105
Msa1241060 AT5G01820.1 28.906 256 143 5 10 228 22 275 1.14e-25 104
Msa1241060 AT1G08650.1 26.996 263 153 5 6 229 11 273 1.38e-25 101
Msa1241060 AT4G04695.1 27.863 262 144 7 12 229 30 290 1.47e-24 101
Msa1241060 AT5G66210.6 28.090 267 149 7 10 234 62 327 2.32e-24 100
Msa1241060 AT5G66210.4 28.090 267 149 7 10 234 62 327 2.32e-24 100
Msa1241060 AT5G66210.5 27.675 271 153 7 10 238 62 331 3.07e-24 100
Msa1241060 AT5G66210.3 27.675 271 153 7 10 238 62 331 3.45e-24 100
Msa1241060 AT2G41140.1 27.925 265 146 7 10 230 123 386 5.31e-24 100
Msa1241060 AT5G66210.1 27.675 271 153 7 10 238 62 331 5.64e-24 100
Msa1241060 AT5G66210.2 27.675 271 153 7 10 238 62 331 5.64e-24 100
Msa1241060 AT4G04700.1 26.718 262 147 6 12 229 30 290 5.71e-24 100
Msa1241060 AT5G24430.1 25.758 264 151 7 10 229 143 405 9.37e-24 99.8
Msa1241060 AT4G36070.2 27.652 264 148 6 8 229 69 331 1.38e-23 99.4
Msa1241060 AT4G36070.1 27.652 264 148 6 8 229 69 331 1.46e-23 99.0
Msa1241060 AT3G50530.2 26.316 304 147 9 10 238 148 449 1.61e-23 99.0
Msa1241060 AT1G50240.3 27.907 258 147 5 7 229 3 256 2.30e-23 99.0
Msa1241060 AT1G50240.2 27.907 258 147 5 7 229 3 256 2.30e-23 99.0
Msa1241060 AT5G09890.1 27.419 310 140 8 3 228 95 403 2.31e-23 98.6
Msa1241060 AT5G09890.2 27.419 310 140 8 3 228 95 403 2.41e-23 98.2
Msa1241060 AT3G45240.3 26.022 269 156 5 2 229 100 366 9.68e-23 95.9
Msa1241060 AT2G46700.1 25.379 264 152 7 10 229 143 405 1.19e-22 96.7
Msa1241060 AT5G18700.1 29.008 262 136 6 7 228 1 252 1.70e-22 96.3
Msa1241060 AT3G21220.2 27.652 264 151 8 6 231 66 327 4.22e-22 93.6
Msa1241060 AT3G21220.1 27.652 264 151 8 6 231 66 327 4.22e-22 93.6
Msa1241060 AT3G49370.1 26.136 264 150 9 10 229 142 404 5.54e-22 94.7
Msa1241060 AT2G20050.2 43.548 124 61 4 112 228 913 1034 7.81e-22 94.4
Msa1241060 AT2G20050.1 43.548 124 61 4 112 228 916 1037 8.19e-22 94.4
Msa1241060 AT1G69220.1 25.735 272 151 7 1 229 240 503 8.27e-22 94.4
Msa1241060 AT4G04710.3 26.493 268 132 8 10 233 36 282 1.04e-21 93.6
Msa1241060 AT3G06030.1 25.954 262 147 8 13 229 71 330 1.18e-21 93.6
Msa1241060 AT1G08650.2 25.969 258 152 5 6 224 11 268 2.75e-21 90.1
Msa1241060 AT1G51660.1 28.517 263 146 9 8 231 77 336 3.91e-21 90.9
Msa1241060 AT3G45240.2 26.103 272 155 6 2 229 100 369 6.91e-21 90.5
Msa1241060 AT3G45240.1 26.103 272 155 6 2 229 100 369 6.91e-21 90.5
Msa1241060 AT3G45780.2 27.338 278 130 4 10 218 663 937 1.25e-20 90.9
Msa1241060 AT3G45780.1 27.338 278 130 4 10 218 663 937 1.25e-20 90.9
Msa1241060 AT3G07980.1 25.940 266 155 7 8 235 18 279 1.59e-20 90.5
Msa1241060 AT3G23310.1 25.658 304 144 6 7 228 117 420 1.64e-20 90.5
Msa1241060 AT3G07980.2 25.940 266 155 7 8 235 18 279 1.78e-20 90.5
Msa1241060 AT5G60550.1 27.106 273 147 8 6 230 103 371 2.85e-20 89.0
Msa1241060 AT5G58140.6 27.899 276 129 4 10 218 577 849 3.55e-20 89.7
Msa1241060 AT5G58140.7 27.899 276 129 4 10 218 577 849 3.55e-20 89.7
Msa1241060 AT5G58140.5 27.899 276 129 4 10 218 577 849 3.55e-20 89.7
Msa1241060 AT5G58140.2 27.899 276 129 4 10 218 577 849 3.55e-20 89.7
Msa1241060 AT5G58140.1 27.899 276 129 4 10 218 577 849 3.55e-20 89.7
Msa1241060 AT5G58140.3 27.599 279 132 4 7 218 574 849 4.16e-20 89.4
Msa1241060 AT1G30270.3 27.128 188 97 4 82 231 6 191 4.83e-20 88.2
Msa1241060 AT1G54960.1 24.812 266 147 7 13 230 71 331 6.90e-20 88.6
Msa1241060 AT1G54960.2 24.812 266 147 7 13 230 71 331 6.90e-20 88.6
Msa1241060 AT1G09000.2 25.287 261 152 5 13 230 72 332 7.10e-20 88.6
Msa1241060 AT5G08590.2 29.947 187 90 4 87 232 1 187 9.74e-20 85.9
Msa1241060 AT4G14350.2 25.497 302 143 7 8 228 117 417 1.04e-19 87.8
Msa1241060 AT4G14350.1 25.497 302 143 7 8 228 117 417 1.04e-19 87.8
Msa1241060 AT4G14350.4 25.497 302 143 7 8 228 117 417 1.04e-19 87.8
Msa1241060 AT4G14350.3 25.497 302 143 7 8 228 117 417 1.08e-19 87.8
Msa1241060 AT1G09000.1 24.904 261 153 5 13 230 72 332 1.12e-19 88.2
Msa1241060 AT2G36350.1 45.192 104 53 1 129 228 794 897 1.28e-19 87.8
Msa1241060 AT3G25250.1 41.121 107 58 2 123 228 226 328 2.95e-19 86.3
Msa1241060 AT1G30640.3 24.104 307 147 7 7 228 24 329 5.45e-19 85.9
Msa1241060 AT2G20470.3 23.920 301 149 6 7 228 121 420 7.99e-19 85.5
Msa1241060 AT2G20470.2 23.841 302 150 6 7 229 121 421 9.06e-19 85.1
Msa1241060 AT2G20470.1 23.841 302 150 6 7 229 121 421 9.06e-19 85.1
Msa1241060 AT1G30640.2 24.104 307 147 7 7 228 117 422 9.26e-19 85.1
Msa1241060 AT1G30640.1 24.104 307 147 7 7 228 117 422 9.26e-19 85.1
Msa1241060 AT4G38230.1 39.024 123 70 3 115 233 21 142 1.01e-18 84.0
Msa1241060 AT3G52890.2 43.269 104 55 1 129 228 775 878 2.09e-18 84.3
Msa1241060 AT3G52890.4 43.269 104 55 1 129 228 775 878 2.09e-18 84.3
Msa1241060 AT3G52890.1 43.269 104 55 1 129 228 775 878 2.09e-18 84.3
Msa1241060 AT3G52890.3 43.269 104 55 1 129 228 775 878 2.09e-18 84.3
Msa1241060 AT4G29810.1 26.812 276 151 7 2 231 62 332 2.16e-18 83.2
Msa1241060 AT4G29810.2 26.812 276 151 7 2 231 71 341 2.40e-18 83.2
Msa1241060 AT3G12690.1 41.176 102 56 1 132 229 408 509 3.75e-18 83.6
Msa1241060 AT3G12690.3 41.176 102 56 1 132 229 408 509 3.75e-18 83.6
Msa1241060 AT3G12690.2 41.176 102 56 1 132 229 408 509 3.75e-18 83.6
Msa1241060 AT3G44610.1 46.667 90 48 0 129 218 309 398 5.72e-18 82.8
Msa1241060 AT2G38490.1 25.681 257 150 7 10 228 28 281 6.25e-18 82.4
Msa1241060 AT5G57630.3 32.394 142 87 5 87 224 34 170 7.58e-18 81.6
Msa1241060 AT4G13000.1 40.777 103 54 3 126 226 222 319 1.03e-17 81.6
Msa1241060 AT1G79250.1 40.385 104 58 1 129 228 376 479 1.08e-17 82.0
Msa1241060 AT1G79250.3 40.385 104 58 1 129 228 376 479 1.08e-17 82.0
Msa1241060 AT1G79250.2 40.385 104 58 1 129 228 376 479 1.08e-17 82.0
Msa1241060 AT1G79250.4 40.385 104 58 1 129 228 376 479 1.08e-17 82.0
Msa1241060 AT1G76040.1 35.644 101 62 2 131 229 33 132 1.78e-17 80.5
Msa1241060 AT1G76040.4 35.644 101 62 2 131 229 33 132 1.78e-17 80.5
Msa1241060 AT5G56580.1 27.599 279 148 9 1 231 61 333 2.05e-17 80.5
Msa1241060 AT1G16440.1 40.385 104 58 1 129 228 332 435 3.43e-17 80.5
Msa1241060 AT3G20830.1 39.000 100 58 1 123 222 234 330 3.71e-17 80.1
Msa1241060 AT1G53570.5 29.583 240 149 9 13 237 217 451 3.84e-17 80.5
Msa1241060 AT5G12480.2 30.000 150 99 4 86 230 76 224 4.50e-17 80.1
Msa1241060 AT2G46700.2 24.885 217 121 6 54 229 9 224 7.18e-17 79.3
Msa1241060 AT2G46700.3 24.885 217 121 6 54 229 9 224 7.18e-17 79.3
Msa1241060 AT5G03640.2 42.553 94 54 0 129 222 774 867 7.55e-17 79.7
Msa1241060 AT5G03640.1 42.553 94 54 0 129 222 774 867 7.55e-17 79.7
Msa1241060 AT5G55910.2 41.837 98 53 1 135 228 348 445 1.61e-16 78.6
Msa1241060 AT5G55910.1 41.837 98 53 1 135 228 348 445 1.61e-16 78.6
Msa1241060 AT4G26610.1 40.404 99 55 1 135 229 358 456 3.44e-16 77.8
Msa1241060 AT5G47750.1 37.624 101 59 1 132 228 426 526 9.31e-16 76.6
Msa1241060 AT3G27580.2 39.604 101 57 1 132 228 415 515 1.08e-15 76.3
Msa1241060 AT3G27580.1 39.604 101 57 1 132 228 415 515 1.08e-15 76.3
Msa1241060 AT1G51170.1 36.111 108 62 2 123 226 233 337 1.48e-15 75.5
Msa1241060 AT3G20860.1 22.901 262 158 8 7 229 1 257 1.92e-15 75.1
Msa1241060 AT2G44830.2 36.697 109 65 1 124 228 588 696 2.26e-15 75.5
Msa1241060 AT2G44830.3 36.697 109 65 1 124 228 588 696 2.26e-15 75.5
Msa1241060 AT2G44830.1 36.697 109 65 1 124 228 588 696 2.26e-15 75.5
Msa1241060 AT3G14370.1 39.623 106 55 3 131 229 293 396 7.83e-14 70.9
Msa1241060 AT2G34650.1 37.500 104 58 2 132 228 290 393 9.16e-14 70.5
Msa1241060 AT4G33080.2 36.607 112 66 2 122 228 290 401 9.63e-14 70.5
Msa1241060 AT4G33080.1 36.607 112 66 2 122 228 290 401 1.13e-13 70.5
Msa1241060 AT4G08480.1 27.586 261 151 9 6 229 496 755 1.35e-13 70.1
Msa1241060 AT1G53700.1 39.785 93 55 1 131 222 297 389 1.94e-13 69.7
Msa1241060 AT2G26700.1 40.000 105 55 3 129 225 354 458 2.80e-13 69.3
Msa1241060 AT5G40030.1 38.614 101 57 2 132 228 343 442 3.81e-13 68.6
Msa1241060 AT2G19400.1 33.333 114 68 3 122 228 301 413 1.58e-12 67.0
Msa1241060 AT1G03920.2 37.624 101 59 2 132 228 221 321 1.69e-12 66.6
Msa1241060 AT1G03920.1 37.624 101 59 2 132 228 334 434 1.98e-12 66.6
Msa1241060 AT1G03920.3 37.624 101 59 2 132 228 334 434 1.98e-12 66.6
Msa1241060 AT4G10730.2 22.603 292 155 11 5 239 20 297 4.01e-11 62.8
Msa1241060 AT4G10730.1 22.603 292 155 11 5 239 40 317 4.78e-11 62.8
Msa1241060 AT4G19110.2 24.211 285 150 9 7 228 1 282 5.06e-11 62.4
Msa1241060 AT4G19110.1 24.211 285 150 9 7 228 1 282 5.23e-11 62.4
Msa1241060 AT1G33260.2 36.047 86 50 2 16 101 49 129 6.10e-11 62.0
Msa1241060 AT2G37840.2 28.440 109 76 2 123 229 24 132 8.62e-11 62.0

Find 70 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGCTATGAGTTCCTTTA+TGG 0.072768 8_2:+24281314 Msa1241060:CDS
TGCATTGAAGGTTATCTTTA+AGG 0.144377 8_2:+24279623 Msa1241060:CDS
CGTCTAAAGATTGCAGATTT+TGG 0.203775 8_2:+24281170 Msa1241060:CDS
CCATTTCCCTCCTCAGTTGA+TGG 0.280688 8_2:-24279671 None:intergenic
CATGAATGTACTATCATAAA+TGG 0.285760 8_2:-24281965 None:intergenic
TCCGATCTCAAAGTCGTTGA+TGG 0.300990 8_2:-24278716 None:intergenic
TCAATTAAATTTAACTCATA+AGG 0.303367 8_2:+24282108 Msa1241060:three_prime_UTR
ATGATTATGCTGTTGATAAC+TGG 0.306336 8_2:+24281279 Msa1241060:CDS
GGCATTGCAACATTTCATAT+TGG 0.326026 8_2:+24282130 Msa1241060:three_prime_UTR
CCAAACGTCTTGCGTCTCTA+TGG 0.346188 8_2:+24279717 Msa1241060:CDS
TAAATTTGTGGTTGCATTGA+AGG 0.370967 8_2:+24279611 Msa1241060:CDS
ATTCTTGAATATGCTCATAA+TGG 0.394700 8_2:+24279771 Msa1241060:CDS
AGAAAACGCGCTCGGAATCA+TGG 0.403106 8_2:-24279746 None:intergenic
TGTGATAGAGAGGGCGTGGC+TGG 0.413443 8_2:-24278563 None:intergenic
CCATCAACTGAGGAGGGAAA+TGG 0.415919 8_2:+24279671 Msa1241060:CDS
TAGAGAGGGCGTGGCTGGGC+CGG 0.419086 8_2:-24278558 None:intergenic
TTATGGTGTTCCTCCATTTG+AGG 0.421726 8_2:+24281331 Msa1241060:CDS
CCACTCGGGAAAGGAAAATT+CGG 0.423981 8_2:+24278742 Msa1241060:CDS
GCTTGACTCTCGGCCTCAAA+TGG 0.424430 8_2:-24281344 None:intergenic
CCATAGAGACGCAAGACGTT+TGG 0.427196 8_2:-24279717 None:intergenic
ACTCTCACTCCAGAAGATAA+TGG 0.433243 8_2:+24281827 Msa1241060:CDS
TGAAGATGAATATTTATTTG+AGG 0.437189 8_2:-24278639 None:intergenic
AGAAGATAATGGAGCATCCT+TGG 0.437440 8_2:+24281838 Msa1241060:CDS
ATTGGGTACCTTAACTTCTC+TGG 0.440030 8_2:-24278779 None:intergenic
CAATTAAATTTAACTCATAA+GGG 0.440354 8_2:+24282109 Msa1241060:three_prime_UTR
AAGGATGCTCCATTATCTTC+TGG 0.447723 8_2:-24281836 None:intergenic
AGTCGTTGATGGACCATTCT+CGG 0.456339 8_2:-24278705 None:intergenic
AATCAAGAATGCAAATCGTA+TGG 0.466789 8_2:+24281863 Msa1241060:CDS
TTTGAATTTGTTAGAAGCAA+TGG 0.467572 8_2:-24278615 None:intergenic
CTACGTCGCCAGAGAAGTTA+AGG 0.469587 8_2:+24278771 Msa1241060:CDS
CAAATGGAGGAACACCATAA+AGG 0.471519 8_2:-24281328 None:intergenic
GGATTATTTAGCTCCTGAAA+TGG 0.479853 8_2:+24281241 Msa1241060:CDS
AGAGGGCGTGGCTGGGCCGG+TGG 0.496559 8_2:-24278555 None:intergenic
GCTGTTGATAACTGGACTCT+TGG 0.501602 8_2:+24281287 Msa1241060:CDS
TTTGCATTCTTGATTATCCA+AGG 0.511364 8_2:-24281855 None:intergenic
TACAAGGAACTTAACAAAAG+AGG 0.513100 8_2:+24279801 Msa1241060:CDS
GAATGTATCAGCTTGACTCT+CGG 0.535943 8_2:-24281354 None:intergenic
TCTGAAGAAACAAGAGGACT+AGG 0.541287 8_2:-24281492 None:intergenic
ACGTCTTGCGTCTCTATGGT+TGG 0.550237 8_2:+24279721 Msa1241060:CDS
GTGACTAAAGTTGACTCTAC+TGG 0.555366 8_2:-24281893 None:intergenic
GTGATAGAGAGGGCGTGGCT+GGG 0.555560 8_2:-24278562 None:intergenic
ATCGGAAAACCACTCGGGAA+AGG 0.565594 8_2:+24278733 Msa1241060:CDS
TCCATCAACGACTTTGAGAT+CGG 0.567017 8_2:+24278715 Msa1241060:CDS
CTCAGAGAAGCAAGCTGCAA+CGG 0.567365 8_2:+24279830 Msa1241060:CDS
GAAGAAACAAGAGGACTAGG+AGG 0.568017 8_2:-24281489 None:intergenic
ATCTTCTCGAGGGATCAAGC+TGG 0.572595 8_2:+24281930 Msa1241060:three_prime_UTR
CTGGAGTGAGAGTCGTCTTG+AGG 0.582574 8_2:-24281817 None:intergenic
TCATAATGGTGAGCTATACA+AGG 0.585427 8_2:+24279785 Msa1241060:CDS
TTTGAGATCGGAAAACCACT+CGG 0.589421 8_2:+24278727 Msa1241060:CDS
ATCAAGAATGCAAATCGTAT+GGG 0.592743 8_2:+24281864 Msa1241060:CDS
GGCGGAGAAATGTGATAGAG+AGG 0.595051 8_2:-24278573 None:intergenic
GAAATGTGATAGAGAGGGCG+TGG 0.595839 8_2:-24278567 None:intergenic
TATGTATAACTATCTTCTCG+AGG 0.600558 8_2:+24281919 Msa1241060:three_prime_UTR
TTGGCATCTGAAGAAACAAG+AGG 0.607830 8_2:-24281498 None:intergenic
GAACTGTTGTAAAGAAAGTG+TGG 0.608736 8_2:+24282057 Msa1241060:three_prime_UTR
CATAAAGGAACTCATAGCAA+AGG 0.613837 8_2:-24281313 None:intergenic
TGACTCTCGGCCTCAAATGG+AGG 0.615982 8_2:-24281341 None:intergenic
AAGAATCAAGAAAACGCGCT+CGG 0.624994 8_2:-24279754 None:intergenic
ATGTATAACTATCTTCTCGA+GGG 0.625749 8_2:+24281920 Msa1241060:three_prime_UTR
AATTTCACCATCAACTGAGG+AGG 0.629840 8_2:+24279664 Msa1241060:CDS
ATTTCACCATCAACTGAGGA+GGG 0.631368 8_2:+24279665 Msa1241060:CDS
TGTGAGAAAACGTTAACCAC+CGG 0.632867 8_2:+24278539 Msa1241060:five_prime_UTR
TTGAGATCGGAAAACCACTC+GGG 0.635913 8_2:+24278728 Msa1241060:CDS
GCGGAGAAATGTGATAGAGA+GGG 0.638822 8_2:-24278572 None:intergenic
ATAATCCAATGTACCACACA+TGG 0.642195 8_2:-24281225 None:intergenic
GTCAAGCTGATACATTCGAA+AGG 0.643443 8_2:+24281360 Msa1241060:CDS
ACAAATTTCACCATCAACTG+AGG 0.658567 8_2:+24279661 Msa1241060:CDS
AAGAAACAAGAGGACTAGGA+GGG 0.659159 8_2:-24281488 None:intergenic
GGCGAAACAGAGAAACTGAA+CGG 0.669504 8_2:-24278594 None:intergenic
GAAACAGAGAAACTGAACGG+CGG 0.782842 8_2:-24278591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GGTAATAATTTTAAAAAAAA+TGG + chr8_2:24278863-24278882 Msa1241060:intron 10.0%
!!! ATATATAAGCTATATTTTTT+AGG + chr8_2:24279223-24279242 Msa1241060:intron 10.0%
!!! TATATAAGCTATATTTTTTA+GGG + chr8_2:24279224-24279243 Msa1241060:intron 10.0%
!! TGAAAATAAAAATGATATAA+GGG - chr8_2:24279489-24279508 None:intergenic 10.0%
!! TTGAAAATAAAAATGATATA+AGG - chr8_2:24279490-24279509 None:intergenic 10.0%
!!! TTTATTTTCAAATTTATAAG+TGG + chr8_2:24279499-24279518 Msa1241060:intron 10.0%
!! AAAATTAGTGAAAAATTTAT+TGG - chr8_2:24279571-24279590 None:intergenic 10.0%
!!! TTGAATTTGAATATGTTTTT+GGG - chr8_2:24278518-24278537 None:intergenic 15.0%
!!! TTTGAATTTGAATATGTTTT+TGG - chr8_2:24278519-24278538 None:intergenic 15.0%
!! ATTATTCAGTGTATATATTA+TGG + chr8_2:24279037-24279056 Msa1241060:intron 15.0%
!! TTATTCAGTGTATATATTAT+GGG + chr8_2:24279038-24279057 Msa1241060:intron 15.0%
!!! TAATAAATTTTGAAGGATTA+GGG + chr8_2:24279061-24279080 Msa1241060:intron 15.0%
!!! CTTTTTTAAATGACTTATAT+AGG + chr8_2:24279420-24279439 Msa1241060:intron 15.0%
!! AATAAATCAAAATAAGATCT+TGG + chr8_2:24279457-24279476 Msa1241060:intron 15.0%
!! ATAAATCAAAATAAGATCTT+GGG + chr8_2:24279458-24279477 Msa1241060:intron 15.0%
!! GAAAATAAAAATGATATAAG+GGG - chr8_2:24279488-24279507 None:intergenic 15.0%
!! ACTTACAAAAATCAATATAA+GGG - chr8_2:24280464-24280483 None:intergenic 15.0%
!! AACTTACAAAAATCAATATA+AGG - chr8_2:24280465-24280484 None:intergenic 15.0%
!!! ATTTGTAAATTTAAGATTTG+AGG + chr8_2:24281098-24281117 Msa1241060:intron 15.0%
!!! TTTGTAAATTTAAGATTTGA+GGG + chr8_2:24281099-24281118 Msa1241060:intron 15.0%
!! GACTAAAAACAAAAAAATTT+AGG - chr8_2:24281578-24281597 None:intergenic 15.0%
!! AAAAATCATTCAAAAATTGT+TGG - chr8_2:24281645-24281664 None:intergenic 15.0%
!! AAATTAGATGAAAAAATGTT+TGG - chr8_2:24282083-24282102 None:intergenic 15.0%
!! TCAATTAAATTTAACTCATA+AGG + chr8_2:24282108-24282127 Msa1241060:three_prime_UTR 15.0%
!! CAATTAAATTTAACTCATAA+GGG + chr8_2:24282109-24282128 Msa1241060:three_prime_UTR 15.0%
!!! TGAATTTGAATATGTTTTTG+GGG - chr8_2:24278517-24278536 None:intergenic 20.0%
!! TGAAGATGAATATTTATTTG+AGG - chr8_2:24278642-24278661 None:intergenic 20.0%
!! AAAAAGTAAATAGTGAAATG+GGG - chr8_2:24278809-24278828 None:intergenic 20.0%
!! CAAAAAGTAAATAGTGAAAT+GGG - chr8_2:24278810-24278829 None:intergenic 20.0%
!!! TTTTTAAAATTATTACCGGT+GGG - chr8_2:24278860-24278879 None:intergenic 20.0%
!!! TTTTTTAAAATTATTACCGG+TGG - chr8_2:24278861-24278880 None:intergenic 20.0%
!!! TTATGGGTAATAAATTTTGA+AGG + chr8_2:24279054-24279073 Msa1241060:intron 20.0%
!!! GTAATAAATTTTGAAGGATT+AGG + chr8_2:24279060-24279079 Msa1241060:intron 20.0%
!! TAAACTCATGAAACTAATAA+AGG - chr8_2:24279860-24279879 None:intergenic 20.0%
!!! AAGTAATGATAATAGTTTGT+TGG - chr8_2:24280026-24280045 None:intergenic 20.0%
!! AACATTCTTTGTAAAAAACT+TGG - chr8_2:24280656-24280675 None:intergenic 20.0%
!! TTTACAAAGAATGTTTAAGT+AGG + chr8_2:24280661-24280680 Msa1241060:intron 20.0%
!! TTACAAAGAATGTTTAAGTA+GGG + chr8_2:24280662-24280681 Msa1241060:intron 20.0%
!! GTAAAATTATAAGCATAGAA+TGG - chr8_2:24280704-24280723 None:intergenic 20.0%
!!! TTTTACGCTTAATATTATGA+AGG - chr8_2:24281007-24281026 None:intergenic 20.0%
!! TAATGTATTTAAATTTGTGC+AGG + chr8_2:24281442-24281461 Msa1241060:intron 20.0%
!! AAATATTTAATTCAAGCTGT+GGG - chr8_2:24281701-24281720 None:intergenic 20.0%
!! AAAATATTTAATTCAAGCTG+TGG - chr8_2:24281702-24281721 None:intergenic 20.0%
!! AATCATGTCTATGAAAATAT+AGG - chr8_2:24281743-24281762 None:intergenic 20.0%
!!! ATATTTTCATAGACATGATT+AGG + chr8_2:24281743-24281762 Msa1241060:intron 20.0%
!!! GAATTTGAATATGTTTTTGG+GGG - chr8_2:24278516-24278535 None:intergenic 25.0%
!!! TTTGAATTTGTTAGAAGCAA+TGG - chr8_2:24278618-24278637 None:intergenic 25.0%
! AAAAGTAAATAGTGAAATGG+GGG - chr8_2:24278808-24278827 None:intergenic 25.0%
! GCAAAAAGTAAATAGTGAAA+TGG - chr8_2:24278811-24278830 None:intergenic 25.0%
!!! CTAATTGCATTTTTTGGATT+GGG + chr8_2:24279084-24279103 Msa1241060:intron 25.0%
! TACAGATTACTTGTTTGAAT+AGG - chr8_2:24279370-24279389 None:intergenic 25.0%
!!! ATAAGTGGATTTTCAAGTAA+AGG + chr8_2:24279514-24279533 Msa1241060:intron 25.0%
!!! TTTTTTCCAGAGTAAATTTG+TGG + chr8_2:24279599-24279618 Msa1241060:intron 25.0%
! ATTCTTGAATATGCTCATAA+TGG + chr8_2:24279771-24279790 Msa1241060:CDS 25.0%
!! ATTAGTTTCATGAGTTTATG+TGG + chr8_2:24279862-24279881 Msa1241060:intron 25.0%
! TTTGAAGAATTACCATAATG+AGG + chr8_2:24279889-24279908 Msa1241060:intron 25.0%
! AAAAATCAATATAAGGGACA+AGG - chr8_2:24280458-24280477 None:intergenic 25.0%
! ATACAAAGAATTGCTACAAA+AGG - chr8_2:24280732-24280751 None:intergenic 25.0%
! GAATAATATTGAGTTCACAT+TGG - chr8_2:24280935-24280954 None:intergenic 25.0%
!!! TAGTTTGATTGATAATGTCT+TGG + chr8_2:24281138-24281157 Msa1241060:intron 25.0%
! AAATTTGTGCAGGATAAAAA+AGG + chr8_2:24281452-24281471 Msa1241060:intron 25.0%
!!! TAAACTTTTTCTTAGACTCT+TGG + chr8_2:24281601-24281620 Msa1241060:intron 25.0%
! AAAATTGTTGGCAGAAAATA+TGG - chr8_2:24281633-24281652 None:intergenic 25.0%
!! TTTTTGAATGATTTTTTGCG+CGG + chr8_2:24281649-24281668 Msa1241060:intron 25.0%
! AATATTTAATTCAAGCTGTG+GGG - chr8_2:24281700-24281719 None:intergenic 25.0%
! CATGAATGTACTATCATAAA+TGG - chr8_2:24281968-24281987 None:intergenic 25.0%
AAAGTAAATAGTGAAATGGG+GGG - chr8_2:24278807-24278826 None:intergenic 30.0%
!!! TTAGGGCTAATTGCATTTTT+TGG + chr8_2:24279078-24279097 Msa1241060:intron 30.0%
!!! GCTAATTGCATTTTTTGGAT+TGG + chr8_2:24279083-24279102 Msa1241060:intron 30.0%
GATTGGGATTGTAATCTTTA+GGG + chr8_2:24279100-24279119 Msa1241060:intron 30.0%
TGCAATTAAGCTATTGTACA+TGG - chr8_2:24279156-24279175 None:intergenic 30.0%
TAGTATTTACACTTTCGTCT+GGG - chr8_2:24279321-24279340 None:intergenic 30.0%
TTAGTATTTACACTTTCGTC+TGG - chr8_2:24279322-24279341 None:intergenic 30.0%
TAAATTTGTGGTTGCATTGA+AGG + chr8_2:24279611-24279630 Msa1241060:CDS 30.0%
TGCATTGAAGGTTATCTTTA+AGG + chr8_2:24279623-24279642 Msa1241060:CDS 30.0%
TACAAGGAACTTAACAAAAG+AGG + chr8_2:24279801-24279820 Msa1241060:CDS 30.0%
TTAAAAAAGCAGCCTCATTA+TGG - chr8_2:24279904-24279923 None:intergenic 30.0%
!! CTTAAACTTTTCCTTGCTAT+TGG + chr8_2:24279975-24279994 Msa1241060:intron 30.0%
CATTACTTTGACATGAATCA+TGG + chr8_2:24280038-24280057 Msa1241060:intron 30.0%
GTGAGTGTAATTATAAGTGT+TGG - chr8_2:24280131-24280150 None:intergenic 30.0%
TATGTTTACGCATTAATGAG+CGG + chr8_2:24280344-24280363 Msa1241060:intron 30.0%
TCTGTATCATACTATCTATC+CGG + chr8_2:24280516-24280535 Msa1241060:intron 30.0%
ATCATAGTTCCTAAGAAATC+CGG - chr8_2:24280538-24280557 None:intergenic 30.0%
TAACGAAATGCTATGAAACA+TGG + chr8_2:24280592-24280611 Msa1241060:intron 30.0%
CAGAGAAAGTTAGTGAAAAT+TGG + chr8_2:24280619-24280638 Msa1241060:intron 30.0%
AAAGAATTGCTACAAAAGGA+AGG - chr8_2:24280728-24280747 None:intergenic 30.0%
! TTAGTACATTTTAAGCCTCA+CGG + chr8_2:24280792-24280811 Msa1241060:intron 30.0%
TGATATCTCTGTGAATAACA+TGG - chr8_2:24280843-24280862 None:intergenic 30.0%
! TGATCAAGCAACAAATTTTC+AGG - chr8_2:24280868-24280887 None:intergenic 30.0%
!! AAATTTGTTGCTTGATCATG+AGG + chr8_2:24280870-24280889 Msa1241060:intron 30.0%
!! TAAAGATTGCAGATTTTGGT+TGG + chr8_2:24281174-24281193 Msa1241060:CDS 30.0%
!!! GTTTTGTTTTCTACCATTTC+AGG - chr8_2:24281257-24281276 None:intergenic 30.0%
!! ATGATTATGCTGTTGATAAC+TGG + chr8_2:24281279-24281298 Msa1241060:CDS 30.0%
ATGCCAAAAATCTGATTAGT+CGG + chr8_2:24281514-24281533 Msa1241060:CDS 30.0%
ATATTTAATTCAAGCTGTGG+GGG - chr8_2:24281699-24281718 None:intergenic 30.0%
TTTGCATTCTTGATTATCCA+AGG - chr8_2:24281858-24281877 None:intergenic 30.0%
AATCAAGAATGCAAATCGTA+TGG + chr8_2:24281863-24281882 Msa1241060:CDS 30.0%
ATCAAGAATGCAAATCGTAT+GGG + chr8_2:24281864-24281883 Msa1241060:CDS 30.0%
TATGTATAACTATCTTCTCG+AGG + chr8_2:24281919-24281938 Msa1241060:three_prime_UTR 30.0%
ATGTATAACTATCTTCTCGA+GGG + chr8_2:24281920-24281939 Msa1241060:three_prime_UTR 30.0%
CTTCAGATTGAAGATGTGTT+TGG - chr8_2:24278930-24278949 None:intergenic 35.0%
! TCAATCTGAAGTGTAAGTGT+TGG + chr8_2:24278939-24278958 Msa1241060:intron 35.0%
GGATTGGGATTGTAATCTTT+AGG + chr8_2:24279099-24279118 Msa1241060:intron 35.0%
!! TGTAATCTTTAGGGAGTGTT+TGG + chr8_2:24279109-24279128 Msa1241060:intron 35.0%
!! AGTTTAACTGGTTTGAGCTA+AGG + chr8_2:24279256-24279275 Msa1241060:intron 35.0%
!! GTTTAACTGGTTTGAGCTAA+GGG + chr8_2:24279257-24279276 Msa1241060:intron 35.0%
TTCAATTGTTCAGACTTCAG+TGG + chr8_2:24279542-24279561 Msa1241060:intron 35.0%
TCAATTGTTCAGACTTCAGT+GGG + chr8_2:24279543-24279562 Msa1241060:intron 35.0%
ATGCAACCACAAATTTACTC+TGG - chr8_2:24279608-24279627 None:intergenic 35.0%
ACAAATTTCACCATCAACTG+AGG + chr8_2:24279661-24279680 Msa1241060:CDS 35.0%
TCATAATGGTGAGCTATACA+AGG + chr8_2:24279785-24279804 Msa1241060:CDS 35.0%
!!! ATGAGGCTGCTTTTTTAACT+TGG + chr8_2:24279906-24279925 Msa1241060:intron 35.0%
TAGCAAGGAAAAGTTTAAGC+TGG - chr8_2:24279974-24279993 None:intergenic 35.0%
!!! AACTTTTCCTTGCTATTGGA+TGG + chr8_2:24279979-24279998 Msa1241060:intron 35.0%
GTTGGAATGACATAAAAACC+AGG - chr8_2:24280008-24280027 None:intergenic 35.0%
TGGAAGATTCAAACACAACT+GGG - chr8_2:24280210-24280229 None:intergenic 35.0%
TTGGAAGATTCAAACACAAC+TGG - chr8_2:24280211-24280230 None:intergenic 35.0%
GATACAGATACTTTACGACA+CGG - chr8_2:24280504-24280523 None:intergenic 35.0%
ACTATCTATCCGGATTTCTT+AGG + chr8_2:24280526-24280545 Msa1241060:intron 35.0%
! GGAGAAAGTGCAATAAAAAC+AGG - chr8_2:24280914-24280933 None:intergenic 35.0%
!! ATTGATAATGTCTTGGTTGC+AGG + chr8_2:24281145-24281164 Msa1241060:intron 35.0%
!! TTGATAATGTCTTGGTTGCA+GGG + chr8_2:24281146-24281165 Msa1241060:intron 35.0%
! CGTCTAAAGATTGCAGATTT+TGG + chr8_2:24281170-24281189 Msa1241060:CDS 35.0%
GACAAAAGAAAAACCATGTG+TGG + chr8_2:24281212-24281231 Msa1241060:CDS 35.0%
AAAAACCATGTGTGGTACAT+TGG + chr8_2:24281220-24281239 Msa1241060:CDS 35.0%
ATAATCCAATGTACCACACA+TGG - chr8_2:24281228-24281247 None:intergenic 35.0%
! GGATTATTTAGCTCCTGAAA+TGG + chr8_2:24281241-24281260 Msa1241060:CDS 35.0%
CATAAAGGAACTCATAGCAA+AGG - chr8_2:24281316-24281335 None:intergenic 35.0%
! CTTTGCTATGAGTTCCTTTA+TGG + chr8_2:24281314-24281333 Msa1241060:CDS 35.0%
! GATACATTCGAAAGGTATGA+TGG + chr8_2:24281368-24281387 Msa1241060:intron 35.0%
! TGCCAAAAATCTGATTAGTC+GGG + chr8_2:24281515-24281534 Msa1241060:CDS 35.0%
! TACCCGACTAATCAGATTTT+TGG - chr8_2:24281520-24281539 None:intergenic 35.0%
GAACTGTTGTAAAGAAAGTG+TGG + chr8_2:24282057-24282076 Msa1241060:three_prime_UTR 35.0%
GGCATTGCAACATTTCATAT+TGG + chr8_2:24282130-24282149 Msa1241060:three_prime_UTR 35.0%
TGTGAGAAAACGTTAACCAC+CGG + chr8_2:24278539-24278558 Msa1241060:five_prime_UTR 40.0%
!! ACCATTCTCGGTCCATTTTT+CGG - chr8_2:24278696-24278715 None:intergenic 40.0%
!! TCCATCAACGACTTTGAGAT+CGG + chr8_2:24278715-24278734 Msa1241060:CDS 40.0%
! TTTGAGATCGGAAAACCACT+CGG + chr8_2:24278727-24278746 Msa1241060:CDS 40.0%
ATTGGGTACCTTAACTTCTC+TGG - chr8_2:24278782-24278801 None:intergenic 40.0%
TAGTGAAATGGGGGGAAATT+GGG - chr8_2:24278799-24278818 None:intergenic 40.0%
ATAGTGAAATGGGGGGAAAT+TGG - chr8_2:24278800-24278819 None:intergenic 40.0%
! AGTGTTGGATCGCTACAAAT+TGG + chr8_2:24278954-24278973 Msa1241060:intron 40.0%
TTCAAGATGTCTTCTCGTCA+TGG - chr8_2:24278980-24278999 None:intergenic 40.0%
! AGAAGGAGTTTGAGGTGTTA+AGG + chr8_2:24279281-24279300 Msa1241060:intron 40.0%
! GAAGGAGTTTGAGGTGTTAA+GGG + chr8_2:24279282-24279301 Msa1241060:intron 40.0%
GGCAAGTGTTAGTAATCAGT+TGG - chr8_2:24279349-24279368 None:intergenic 40.0%
AATTTCACCATCAACTGAGG+AGG + chr8_2:24279664-24279683 Msa1241060:CDS 40.0%
ATTTCACCATCAACTGAGGA+GGG + chr8_2:24279665-24279684 Msa1241060:CDS 40.0%
AAGAATCAAGAAAACGCGCT+CGG - chr8_2:24279757-24279776 None:intergenic 40.0%
GGAATGACATAAAAACCAGG+AGG - chr8_2:24280005-24280024 None:intergenic 40.0%
CACTCACTTATTAGCAGTGT+TGG + chr8_2:24280144-24280163 Msa1241060:intron 40.0%
AATATGTCAATGCTTCCGTG+AGG - chr8_2:24280810-24280829 None:intergenic 40.0%
CAAATGGAGGAACACCATAA+AGG - chr8_2:24281331-24281350 None:intergenic 40.0%
TTATGGTGTTCCTCCATTTG+AGG + chr8_2:24281331-24281350 Msa1241060:CDS 40.0%
GAATGTATCAGCTTGACTCT+CGG - chr8_2:24281357-24281376 None:intergenic 40.0%
GTCAAGCTGATACATTCGAA+AGG + chr8_2:24281360-24281379 Msa1241060:CDS 40.0%
AAGAAACAAGAGGACTAGGA+GGG - chr8_2:24281491-24281510 None:intergenic 40.0%
TCTGAAGAAACAAGAGGACT+AGG - chr8_2:24281495-24281514 None:intergenic 40.0%
TTGGCATCTGAAGAAACAAG+AGG - chr8_2:24281501-24281520 None:intergenic 40.0%
! GTCTTGAGGAATCTTTTACC+AGG - chr8_2:24281806-24281825 None:intergenic 40.0%
ACTCTCACTCCAGAAGATAA+TGG + chr8_2:24281827-24281846 Msa1241060:CDS 40.0%
AAGGATGCTCCATTATCTTC+TGG - chr8_2:24281839-24281858 None:intergenic 40.0%
!! AGAAGATAATGGAGCATCCT+TGG + chr8_2:24281838-24281857 Msa1241060:CDS 40.0%
! GTGACTAAAGTTGACTCTAC+TGG - chr8_2:24281896-24281915 None:intergenic 40.0%
GCGGAGAAATGTGATAGAGA+GGG - chr8_2:24278575-24278594 None:intergenic 45.0%
GAAACAGAGAAACTGAACGG+CGG - chr8_2:24278594-24278613 None:intergenic 45.0%
GGCGAAACAGAGAAACTGAA+CGG - chr8_2:24278597-24278616 None:intergenic 45.0%
! AGTCGTTGATGGACCATTCT+CGG - chr8_2:24278708-24278727 None:intergenic 45.0%
TCCGATCTCAAAGTCGTTGA+TGG - chr8_2:24278719-24278738 None:intergenic 45.0%
TTGAGATCGGAAAACCACTC+GGG + chr8_2:24278728-24278747 Msa1241060:CDS 45.0%
CCACTCGGGAAAGGAAAATT+CGG + chr8_2:24278742-24278761 Msa1241060:CDS 45.0%
TTTGACACGTTAACACCCAC+CGG + chr8_2:24278842-24278861 Msa1241060:intron 45.0%
GGGACGTTGAGTAGTTTAAC+TGG + chr8_2:24279244-24279263 Msa1241060:intron 45.0%
TGGTTTGAGCTAAGGGTAGA+AGG + chr8_2:24279264-24279283 Msa1241060:intron 45.0%
CTAAGGGTAGAAGGAGTTTG+AGG + chr8_2:24279273-24279292 Msa1241060:intron 45.0%
CATGAATCATGGACACTCCT+CGG + chr8_2:24280049-24280068 Msa1241060:intron 45.0%
TACAACACATGTCCGACACT+GGG - chr8_2:24280088-24280107 None:intergenic 45.0%
ATACAACACATGTCCGACAC+TGG - chr8_2:24280089-24280108 None:intergenic 45.0%
GATTCAAACACAACTGGGCA+CGG - chr8_2:24280205-24280224 None:intergenic 45.0%
AGAGTGACATTGTGTCAGGT+TGG - chr8_2:24280230-24280249 None:intergenic 45.0%
TCACAGAGTGACATTGTGTC+AGG - chr8_2:24280234-24280253 None:intergenic 45.0%
!! GCTGTTGATAACTGGACTCT+TGG + chr8_2:24281287-24281306 Msa1241060:CDS 45.0%
GAAGAAACAAGAGGACTAGG+AGG - chr8_2:24281492-24281511 None:intergenic 45.0%
CTGTAACTTCATACAGCTCC+TGG + chr8_2:24281785-24281804 Msa1241060:intron 45.0%
!!! ATTTTTTTTAAAATTATTAC+CGG - chr8_2:24278864-24278883 None:intergenic 5.0%
GAAATGTGATAGAGAGGGCG+TGG - chr8_2:24278570-24278589 None:intergenic 50.0%
GGCGGAGAAATGTGATAGAG+AGG - chr8_2:24278576-24278595 None:intergenic 50.0%
!! CCATTTTTCGGCGCAAAGGT+TGG - chr8_2:24278684-24278703 None:intergenic 50.0%
CCAACCTTTGCGCCGAAAAA+TGG + chr8_2:24278681-24278700 Msa1241060:exon 50.0%
GCCGAAAAATGGACCGAGAA+TGG + chr8_2:24278692-24278711 Msa1241060:exon 50.0%
ATCGGAAAACCACTCGGGAA+AGG + chr8_2:24278733-24278752 Msa1241060:CDS 50.0%
! CCGAATTTTCCTTTCCCGAG+TGG - chr8_2:24278745-24278764 None:intergenic 50.0%
CTACGTCGCCAGAGAAGTTA+AGG + chr8_2:24278771-24278790 Msa1241060:CDS 50.0%
CCATTTCCCTCCTCAGTTGA+TGG - chr8_2:24279674-24279693 None:intergenic 50.0%
CCATCAACTGAGGAGGGAAA+TGG + chr8_2:24279671-24279690 Msa1241060:CDS 50.0%
CCATAGAGACGCAAGACGTT+TGG - chr8_2:24279720-24279739 None:intergenic 50.0%
CCAAACGTCTTGCGTCTCTA+TGG + chr8_2:24279717-24279736 Msa1241060:CDS 50.0%
ACGTCTTGCGTCTCTATGGT+TGG + chr8_2:24279721-24279740 Msa1241060:CDS 50.0%
AGAAAACGCGCTCGGAATCA+TGG - chr8_2:24279749-24279768 None:intergenic 50.0%
CTCAGAGAAGCAAGCTGCAA+CGG + chr8_2:24279830-24279849 Msa1241060:CDS 50.0%
ATCATGGACACTCCTCGGAT+AGG + chr8_2:24280054-24280073 Msa1241060:intron 50.0%
AACACAACTGGGCACGGATA+CGG - chr8_2:24280199-24280218 None:intergenic 50.0%
ATCTTCTCGAGGGATCAAGC+TGG + chr8_2:24281930-24281949 Msa1241060:three_prime_UTR 50.0%
!! CGGTCCATTTTTCGGCGCAA+AGG - chr8_2:24278688-24278707 None:intergenic 55.0%
CAGGAGGCCATCCAATAGCA+AGG - chr8_2:24279989-24280008 None:intergenic 55.0%
!! CTTGCTATTGGATGGCCTCC+TGG + chr8_2:24279987-24280006 Msa1241060:intron 55.0%
ATGGACACTCCTCGGATAGG+TGG + chr8_2:24280057-24280076 Msa1241060:intron 55.0%
TAGGTGGTGTGTCCCAGTGT+CGG + chr8_2:24280073-24280092 Msa1241060:intron 55.0%
!! TTGGTGTCGTGTCGCTGTGT+CGG - chr8_2:24280112-24280131 None:intergenic 55.0%
TACGGACACTGGACACGACA+TGG - chr8_2:24280181-24280200 None:intergenic 55.0%
TGACTCTCGGCCTCAAATGG+AGG - chr8_2:24281344-24281363 None:intergenic 55.0%
GCTTGACTCTCGGCCTCAAA+TGG - chr8_2:24281347-24281366 None:intergenic 55.0%
CTGGAGTGAGAGTCGTCTTG+AGG - chr8_2:24281820-24281839 None:intergenic 55.0%
! GTGATAGAGAGGGCGTGGCT+GGG - chr8_2:24278565-24278584 None:intergenic 60.0%
! TGTGATAGAGAGGGCGTGGC+TGG - chr8_2:24278566-24278585 None:intergenic 60.0%
TGGGACACACCACCTATCCG+AGG - chr8_2:24280069-24280088 None:intergenic 60.0%
CTGGGCACGGATACGGACAC+TGG - chr8_2:24280192-24280211 None:intergenic 65.0%
! TAGAGAGGGCGTGGCTGGGC+CGG - chr8_2:24278561-24278580 None:intergenic 70.0%
!! AGAGGGCGTGGCTGGGCCGG+TGG - chr8_2:24278558-24278577 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 24278481 24282153 24278481 ID=Msa1241060;Name=Msa1241060
chr8_2 mRNA 24278481 24282153 24278481 ID=Msa1241060-mRNA-1;Parent=Msa1241060;Name=Msa1241060-mRNA-1;_AED=0.09;_eAED=0.09;_QI=219|0.75|1|1|1|1|5|254|240
chr8_2 exon 24278481 24278792 24278481 ID=Msa1241060-mRNA-1:exon:8579;Parent=Msa1241060-mRNA-1
chr8_2 exon 24279609 24279851 24279609 ID=Msa1241060-mRNA-1:exon:8580;Parent=Msa1241060-mRNA-1
chr8_2 exon 24281167 24281381 24281167 ID=Msa1241060-mRNA-1:exon:8581;Parent=Msa1241060-mRNA-1
chr8_2 exon 24281464 24281536 24281464 ID=Msa1241060-mRNA-1:exon:8582;Parent=Msa1241060-mRNA-1
chr8_2 exon 24281801 24282153 24281801 ID=Msa1241060-mRNA-1:exon:8583;Parent=Msa1241060-mRNA-1
chr8_2 five_prime_UTR 24278481 24278699 24278481 ID=Msa1241060-mRNA-1:five_prime_utr;Parent=Msa1241060-mRNA-1
chr8_2 CDS 24278700 24278792 24278700 ID=Msa1241060-mRNA-1:cds;Parent=Msa1241060-mRNA-1
chr8_2 CDS 24279609 24279851 24279609 ID=Msa1241060-mRNA-1:cds;Parent=Msa1241060-mRNA-1
chr8_2 CDS 24281167 24281381 24281167 ID=Msa1241060-mRNA-1:cds;Parent=Msa1241060-mRNA-1
chr8_2 CDS 24281464 24281536 24281464 ID=Msa1241060-mRNA-1:cds;Parent=Msa1241060-mRNA-1
chr8_2 CDS 24281801 24281899 24281801 ID=Msa1241060-mRNA-1:cds;Parent=Msa1241060-mRNA-1
chr8_2 three_prime_UTR 24281900 24282153 24281900 ID=Msa1241060-mRNA-1:three_prime_utr;Parent=Msa1241060-mRNA-1
Gene Sequence

>Msa1241060

ATGGACCGAGAATGGTCCATCAACGACTTTGAGATCGGAAAACCACTCGGGAAAGGAAAATTCGGCAGAGTCTACGTCGCCAGAGAAGTTAAGAGTAAATTTGTGGTTGCATTGAAGGTTATCTTTAAGGAACAACTTGAAAAGTACAAATTTCACCATCAACTGAGGAGGGAAATGGAGATACAGATAAGTCTTAAACATCCAAACGTCTTGCGTCTCTATGGTTGGTTCCATGATTCCGAGCGCGTTTTCTTGATTCTTGAATATGCTCATAATGGTGAGCTATACAAGGAACTTAACAAAAGAGGTCATTTCTCAGAGAAGCAAGCTGCAACGGGTCGTCTAAAGATTGCAGATTTTGGTTGGTCTGTACAATCTAAAGACAAAAGAAAAACCATGTGTGGTACATTGGATTATTTAGCTCCTGAAATGGTAGAAAACAAAACTCATGATTATGCTGTTGATAACTGGACTCTTGGTATCCTTTGCTATGAGTTCCTTTATGGTGTTCCTCCATTTGAGGCCGAGAGTCAAGCTGATACATTCGAAAGGATAAAAAAGGTTGATTTAAGCTTCCCTCCTAGTCCTCTTGTTTCTTCAGATGCCAAAAATCTGATTAGTCGGCTCCTGGTAAAAGATTCCTCAAGACGACTCTCACTCCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAAATCGTATGGGTGTCTGCCAGTAG
Protein sequence

>Msa1241060

MDREWSINDFEIGKPLGKGKFGRVYVAREVKSKFVVALKVIFKEQLEKYKFHHQLRREMEIQISLKHPNVLRLYGWFHDSERVFLILEYAHNGELYKELNKRGHFSEKQAATGRLKIADFGWSVQSKDKRKTMCGTLDYLAPEMVENKTHDYAVDNWTLGILCYEFLYGVPPFEAESQADTFERIKKVDLSFPPSPLVSSDAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNANRMGVCQ*