AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1245190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245190 MtrunA17_Chr8g0360071 96.507 458 16 0 4 461 3 460 0.0 909
Msa1245190 MtrunA17_Chr4g0025351 68.657 469 137 4 3 461 10 478 0.0 634
Msa1245190 MtrunA17_Chr8g0362591 67.111 450 145 2 14 461 7 455 0.0 597
Msa1245190 MtrunA17_Chr8g0369261 56.900 471 160 12 1 461 1 438 1.45e-164 471
Msa1245190 MtrunA17_Chr8g0363981 53.244 447 167 9 13 458 24 429 2.91e-148 429
Msa1245190 MtrunA17_Chr8g0363821 52.941 459 173 11 14 461 23 449 1.62e-146 426
Msa1245190 MtrunA17_Chr8g0363971 48.509 503 182 13 2 461 13 481 6.85e-135 397
Msa1245190 MtrunA17_Chr2g0319941 44.612 464 229 10 3 457 13 457 2.79e-102 313
Msa1245190 MtrunA17_Chr8g0362491 42.737 475 231 15 2 457 11 463 2.11e-101 311
Msa1245190 MtrunA17_Chr8g0363791 58.123 277 95 4 193 462 5 267 5.53e-99 298
Msa1245190 MtrunA17_Chr8g0360061 41.031 485 235 15 6 457 11 477 2.98e-94 293
Msa1245190 MtrunA17_Chr8g0362021 42.647 476 233 12 1 461 7 457 1.24e-92 288
Msa1245190 MtrunA17_Chr5g0444311 38.347 472 260 9 1 456 5 461 1.15e-85 270
Msa1245190 MtrunA17_Chr8g0362521 39.957 463 255 8 1 455 2 449 2.37e-83 264
Msa1245190 MtrunA17_Chr8g0362001 50.166 301 112 10 13 302 83 356 3.95e-81 255
Msa1245190 MtrunA17_Chr8g0362461 39.451 474 208 18 5 456 2 418 5.32e-80 254
Msa1245190 MtrunA17_Chr8g0358771 43.526 363 179 11 101 457 9 351 3.89e-70 226
Msa1245190 MtrunA17_Chr2g0321161 69.231 143 44 0 319 461 17 159 1.47e-61 197
Msa1245190 MtrunA17_Chr8g0363951 44.318 264 133 4 201 456 8 265 2.12e-57 190
Msa1245190 MtrunA17_Chr8g0363801 58.108 148 48 5 14 155 9 148 1.09e-47 161
Msa1245190 MtrunA17_Chr4g0014361 35.168 327 169 8 155 456 3 311 1.16e-45 161
Msa1245190 MtrunA17_Chr4g0011341 37.419 310 156 10 161 457 23 307 8.12e-45 159
Msa1245190 MtrunA17_Chr8g0340591 39.689 257 147 6 204 457 17 268 3.33e-44 155
Msa1245190 MtrunA17_Chr4g0014371 49.367 158 71 3 5 155 3 158 1.22e-40 142
Msa1245190 MtrunA17_Chr8g0373051 40.816 245 127 6 7 246 3 234 2.40e-36 137
Msa1245190 MtrunA17_Chr8g0373051 48.120 133 66 3 325 457 249 378 1.09e-29 119
Msa1245190 MtrunA17_Chr1g0166251 29.870 462 222 17 13 457 10 386 2.09e-34 132
Msa1245190 MtrunA17_Chr5g0405101 48.101 158 66 6 5 155 14 162 4.19e-32 120
Msa1245190 MtrunA17_Chr8g0363941 47.020 151 71 4 11 155 13 160 5.65e-31 117
Msa1245190 MtrunA17_Chr7g0236211 29.011 455 241 16 11 457 9 389 6.33e-31 123
Msa1245190 MtrunA17_Chr4g0011381 39.076 238 131 10 204 435 4 233 4.26e-30 117
Msa1245190 MtrunA17_Chr5g0438191 29.018 448 267 16 13 449 12 419 5.87e-30 121
Msa1245190 MtrunA17_Chr8g0340611 44.737 152 74 4 14 156 10 160 3.64e-29 112
Msa1245190 MtrunA17_Chr5g0405111 34.572 269 116 8 193 457 5 217 2.41e-28 111
Msa1245190 MtrunA17_Chr2g0321151 45.033 151 67 4 41 185 2 142 2.93e-28 110
Msa1245190 MtrunA17_Chr5g0435741 28.352 455 268 17 13 449 32 446 5.12e-28 115
Msa1245190 MtrunA17_Chr7g0224001 27.754 472 251 17 1 458 1 396 5.63e-28 115
Msa1245190 MtrunA17_Chr3g0114151 27.412 456 259 16 8 456 18 408 1.50e-26 110
Msa1245190 MtrunA17_Chr5g0396411 26.623 462 254 18 16 457 1 397 1.56e-26 110
Msa1245190 MtrunA17_Chr7g0262081 28.009 457 233 15 13 457 29 401 2.31e-26 110
Msa1245190 MtrunA17_Chr7g0227641 29.039 458 208 20 13 456 10 364 1.55e-25 107
Msa1245190 MtrunA17_Chr8g0340581 46.939 147 70 6 14 155 16 159 3.74e-24 99.0
Msa1245190 MtrunA17_Chr5g0396401 25.658 456 247 17 11 457 5 377 1.96e-23 101
Msa1245190 MtrunA17_Chr1g0193401 26.915 457 254 16 8 457 175 558 1.97e-22 100
Msa1245190 MtrunA17_Chr1g0181601 25.499 451 258 18 13 456 7 386 2.27e-22 98.6
Msa1245190 MtrunA17_Chr8g0340521 41.615 161 79 6 1 155 35 186 2.35e-22 94.4
Msa1245190 MtrunA17_Chr8g0340541 54.762 84 34 2 374 457 25 104 3.60e-22 90.9
Msa1245190 MtrunA17_Chr7g0227851 37.559 213 100 11 13 216 10 198 1.57e-21 95.9
Msa1245190 MtrunA17_Chr4g0011351 41.143 175 75 8 2 155 9 176 2.41e-21 92.0
Msa1245190 MtrunA17_Chr7g0246351 25.427 468 240 20 14 454 6 391 3.74e-21 95.1
Msa1245190 MtrunA17_Chr5g0431711 35.747 221 114 13 1 217 1 197 4.09e-21 94.7
Msa1245190 MtrunA17_Chr7g0274231 35.000 220 118 9 6 219 4 204 7.17e-21 92.0
Msa1245190 MtrunA17_Chr1g0208801 27.009 448 258 16 9 454 3 383 1.42e-20 93.2
Msa1245190 MtrunA17_Chr6g0465671 24.558 452 255 18 13 457 7 379 2.59e-20 92.4
Msa1245190 MtrunA17_Chr6g0466481 24.558 452 255 18 13 457 7 379 3.24e-20 92.0
Msa1245190 MtrunA17_Chr5g0419701 28.979 421 217 17 15 424 5 354 4.13e-20 92.0
Msa1245190 MtrunA17_Chr7g0226481 35.185 216 113 10 5 217 2 193 6.19e-20 90.9
Msa1245190 MtrunA17_Chr7g0226481 32.692 156 96 4 310 457 196 350 2.15e-11 65.1
Msa1245190 MtrunA17_Chr5g0395311 26.258 457 256 15 16 462 28 413 2.43e-19 90.1
Msa1245190 MtrunA17_Chr3g0138371 25.386 453 244 14 14 456 20 388 2.46e-19 89.7
Msa1245190 MtrunA17_Chr2g0297931 26.439 469 257 19 5 456 2 399 3.88e-19 89.4
Msa1245190 MtrunA17_Chr2g0326831 24.348 460 288 18 6 426 61 499 7.36e-19 89.4
Msa1245190 MtrunA17_Chr5g0425131 32.456 228 120 10 1 222 1 200 9.03e-19 85.9
Msa1245190 MtrunA17_Chr5g0423901 31.193 218 125 7 7 222 2 196 2.02e-18 87.0
Msa1245190 MtrunA17_Chr3g0138571 32.710 214 112 9 14 222 13 199 2.10e-18 86.7
Msa1245190 MtrunA17_Chr7g0262121 25.586 469 231 21 13 457 19 393 9.25e-18 85.1
Msa1245190 MtrunA17_Chr5g0419561 25.481 416 221 16 12 424 10 339 1.32e-17 84.3
Msa1245190 MtrunA17_Chr4g0027441 28.281 442 257 19 14 429 9 416 4.75e-17 83.2
Msa1245190 MtrunA17_Chr4g0041631 26.834 477 295 19 11 459 16 466 5.15e-17 83.2
Msa1245190 MtrunA17_Chr2g0278121 33.333 219 113 9 13 215 15 216 5.71e-17 82.8
Msa1245190 MtrunA17_Chr3g0137701 34.862 218 106 10 14 217 9 204 6.51e-17 82.4
Msa1245190 MtrunA17_Chr3g0137721 33.028 218 112 9 7 218 6 195 6.63e-17 82.4
Msa1245190 MtrunA17_Chr3g0091171 34.286 210 107 10 14 217 5 189 9.23e-17 81.6
Msa1245190 MtrunA17_Chr8g0358761 59.375 64 24 2 1 64 1 62 1.11e-16 74.7
Msa1245190 MtrunA17_Chr2g0278801 32.018 228 118 7 13 234 1 197 1.53e-16 79.0
Msa1245190 MtrunA17_Chr7g0227821 35.096 208 110 9 13 217 10 195 2.39e-16 78.6
Msa1245190 MtrunA17_Chr7g0236151 32.020 203 88 8 14 215 9 162 2.74e-16 79.7
Msa1245190 MtrunA17_Chr7g0236191 32.020 203 88 8 14 215 9 162 2.74e-16 79.7
Msa1245190 MtrunA17_Chr4g0027411 25.474 475 262 16 14 425 9 454 3.37e-16 80.9
Msa1245190 MtrunA17_Chr3g0137681 31.336 217 116 9 11 219 7 198 3.60e-16 80.1
Msa1245190 MtrunA17_Chr7g0236101 34.146 164 93 5 14 176 9 158 4.29e-16 75.9
Msa1245190 MtrunA17_Chr7g0227771 31.132 212 107 9 14 215 4 186 5.88e-16 76.6
Msa1245190 MtrunA17_Chr3g0086041 32.864 213 115 11 5 215 20 206 6.90e-16 79.3
Msa1245190 MtrunA17_Chr7g0227631 27.778 378 181 16 92 456 10 308 7.05e-16 78.2
Msa1245190 MtrunA17_Chr7g0262091 31.429 210 112 9 13 217 17 199 7.63e-16 79.0
Msa1245190 MtrunA17_Chr7g0262091 35.461 141 85 3 322 457 252 391 3.27e-11 65.1
Msa1245190 MtrunA17_Chr3g0093361 32.075 212 109 9 14 217 43 227 2.39e-15 77.8
Msa1245190 MtrunA17_Chr3g0086141 32.701 211 109 9 14 215 3 189 2.56e-15 75.1
Msa1245190 MtrunA17_Chr6g0458601 32.870 216 119 9 2 215 54 245 6.63e-15 76.6
Msa1245190 MtrunA17_Chr8g0340571 44.048 84 45 2 367 450 17 98 7.19e-15 70.5
Msa1245190 MtrunA17_Chr5g0419431 31.839 223 124 10 1 219 1 199 1.00e-14 75.9
Msa1245190 MtrunA17_Chr6g0471031 31.925 213 122 9 10 219 57 249 1.21e-14 75.9
Msa1245190 MtrunA17_Chr4g0027431 26.667 450 254 19 14 429 9 416 1.24e-14 75.9
Msa1245190 MtrunA17_Chr1g0164901 32.195 205 120 6 14 215 9 197 1.31e-14 75.1
Msa1245190 MtrunA17_Chr7g0252201 36.943 157 79 7 4 157 7 146 3.59e-14 73.2
Msa1245190 MtrunA17_Chr3g0136291 28.155 206 126 5 12 217 12 195 4.19e-14 73.2
Msa1245190 MtrunA17_Chr7g0235361 30.093 216 125 9 13 226 39 230 5.12e-14 73.2
Msa1245190 MtrunA17_Chr2g0277281 31.982 222 120 9 6 215 3 205 5.23e-14 73.6
Msa1245190 MtrunA17_Chr7g0236221 36.975 119 65 4 14 131 9 118 7.16e-14 68.6
Msa1245190 MtrunA17_Chr8g0362011 65.217 46 16 0 357 402 1 46 7.23e-14 66.2
Msa1245190 MtrunA17_Chr3g0107721 30.594 219 122 7 14 220 3 203 8.78e-14 73.2
Msa1245190 MtrunA17_Chr2g0278131 42.500 80 45 1 1 80 1 79 1.25e-13 66.2
Msa1245190 MtrunA17_Chr2g0278791 30.942 223 123 7 13 234 1 193 1.44e-13 72.0
Msa1245190 MtrunA17_Chr8g0356821 39.333 150 77 7 204 346 3 145 1.71e-13 67.8
Msa1245190 MtrunA17_Chr7g0227651 32.420 219 116 9 12 223 9 202 1.99e-13 71.6
Msa1245190 MtrunA17_Chr4g0049751 30.690 290 148 14 14 294 18 263 2.62e-13 71.6
Msa1245190 MtrunA17_Chr5g0438051 29.384 211 126 6 14 213 6 204 3.93e-13 70.9
Msa1245190 MtrunA17_Chr7g0273871 28.986 207 124 8 12 217 11 195 8.31e-13 69.7
Msa1245190 MtrunA17_Chr7g0215531 29.444 180 93 5 3 181 2 148 1.26e-12 65.9
Msa1245190 MtrunA17_Chr4g0076481 30.045 223 126 8 14 235 28 221 1.36e-12 67.4
Msa1245190 MtrunA17_Chr3g0120901 39.669 121 62 5 14 134 17 126 1.39e-12 68.2
Msa1245190 MtrunA17_Chr7g0226471 33.577 137 83 3 328 457 12 147 1.52e-12 65.1
Msa1245190 MtrunA17_Chr3g0139601 35.714 210 96 12 14 216 13 190 1.61e-12 69.3
Msa1245190 MtrunA17_Chr8g0378391 47.222 72 31 2 13 84 10 74 2.20e-12 62.4
Msa1245190 MtrunA17_Chr4g0023251 31.416 226 108 11 13 219 1 198 2.44e-12 67.4
Msa1245190 MtrunA17_Chr5g0423851 31.481 216 122 9 9 222 3 194 2.75e-12 68.2
Msa1245190 MtrunA17_Chr6g0457681 29.843 191 117 7 2 182 43 226 2.84e-12 68.2
Msa1245190 MtrunA17_Chr7g0227621 42.683 82 40 2 13 94 10 84 3.41e-12 63.2
Msa1245190 MtrunA17_Chr2g0278101 28.959 221 131 7 5 215 3 207 4.41e-12 67.0
Msa1245190 MtrunA17_Chr7g0236171 43.678 87 41 3 14 99 9 88 7.47e-12 63.9
Msa1245190 MtrunA17_Chr7g0236131 43.678 87 41 3 14 99 9 88 7.47e-12 63.9
Msa1245190 MtrunA17_Chr7g0236081 43.678 87 41 3 14 99 9 88 7.47e-12 63.9
Msa1245190 MtrunA17_Chr6g0465731 31.579 209 110 10 16 218 10 191 9.03e-12 66.6
Msa1245190 MtrunA17_Chr3g0129711 44.211 95 45 5 12 102 2 92 1.06e-11 61.6
Msa1245190 MtrunA17_Chr3g0132631 30.317 221 100 11 7 216 5 182 1.15e-11 66.2
Msa1245190 MtrunA17_Chr5g0440681 32.710 214 119 11 4 215 20 210 1.25e-11 66.2
Msa1245190 MtrunA17_Chr7g0231671 25.764 458 251 19 10 425 15 425 1.59e-11 66.2
Msa1245190 MtrunA17_Chr7g0255101 29.358 218 128 8 1 217 97 289 1.62e-11 66.2
Msa1245190 MtrunA17_Chr0c09g0493551 31.100 209 111 10 16 218 10 191 1.86e-11 65.1
Msa1245190 MtrunA17_Chr7g0236141 42.857 77 44 0 381 457 147 223 1.92e-11 63.5
Msa1245190 MtrunA17_Chr7g0236091 42.857 77 44 0 381 457 147 223 1.92e-11 63.5
Msa1245190 MtrunA17_Chr7g0236181 42.857 77 44 0 381 457 147 223 1.92e-11 63.5
Msa1245190 MtrunA17_Chr7g0227831 33.945 109 68 3 348 456 16 120 2.25e-11 61.2
Msa1245190 MtrunA17_Chr7g0235851 30.918 207 118 9 14 217 5 189 2.99e-11 65.1
Msa1245190 MtrunA17_Chr7g0235821 30.918 207 118 9 14 217 5 189 3.02e-11 65.1
Msa1245190 MtrunA17_Chr3g0129741 39.024 123 64 7 9 125 13 130 3.50e-11 62.0
Msa1245190 MtrunA17_Chr7g0221741 25.000 332 200 13 1 315 1 300 4.20e-11 64.3
Msa1245190 MtrunA17_Chr3g0096461 29.907 214 130 7 5 216 14 209 6.73e-11 64.3
Msa1245190 MtrunA17_Chr8g0366411 33.544 158 85 6 3 157 69 209 7.37e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1245190 AT5G56420.1 29.399 466 258 17 14 457 6 422 8.71e-30 120
Msa1245190 AT5G56420.2 29.399 466 258 17 14 457 6 422 8.71e-30 120
Msa1245190 AT5G56420.3 29.399 466 258 17 14 457 6 422 8.71e-30 120
Msa1245190 AT5G53840.1 26.282 468 278 18 14 458 18 441 6.64e-24 104
Msa1245190 AT4G26340.1 26.754 456 286 16 13 457 1 419 4.89e-23 101
Msa1245190 AT4G10400.2 26.889 450 281 16 13 456 1 408 8.36e-23 100
Msa1245190 AT4G10400.3 26.889 450 281 16 13 456 1 408 8.36e-23 100
Msa1245190 AT4G10400.1 26.889 450 281 16 13 456 1 408 8.36e-23 100
Msa1245190 AT2G26030.4 26.105 475 282 19 14 454 4 443 8.40e-22 98.2
Msa1245190 AT1G16930.2 25.880 483 288 19 4 457 8 449 1.38e-21 97.4
Msa1245190 AT1G16930.1 25.880 483 288 19 4 457 8 449 1.38e-21 97.4
Msa1245190 AT1G16930.3 25.880 483 288 19 4 457 8 449 1.38e-21 97.4
Msa1245190 AT1G69630.1 24.600 500 279 16 1 454 1 448 3.02e-21 96.3
Msa1245190 AT4G13985.1 24.597 496 289 19 3 454 2 456 5.28e-21 95.9
Msa1245190 AT2G26030.3 26.205 477 274 20 14 454 4 438 9.28e-21 94.7
Msa1245190 AT2G26030.1 26.205 477 274 20 14 454 4 438 9.28e-21 94.7
Msa1245190 AT2G26860.1 29.002 431 236 16 13 416 1 388 1.77e-20 93.6
Msa1245190 AT2G26860.2 29.002 431 236 16 13 416 1 388 1.77e-20 93.6
Msa1245190 AT1G32375.2 26.694 487 250 22 13 457 1 422 2.14e-20 93.6
Msa1245190 AT1G32375.1 26.694 487 250 22 13 457 1 422 2.14e-20 93.6
Msa1245190 AT1G78750.2 26.452 465 293 19 13 454 17 455 3.83e-20 93.2
Msa1245190 AT1G78750.1 26.452 465 293 19 13 454 17 455 3.83e-20 93.2
Msa1245190 AT5G56560.2 27.851 456 273 20 15 457 6 418 5.40e-20 92.4
Msa1245190 AT4G00160.1 29.289 478 259 20 14 459 16 446 7.62e-20 92.0
Msa1245190 AT5G56400.1 25.751 466 283 17 13 457 32 455 8.60e-20 92.0
Msa1245190 AT5G53635.1 26.237 465 278 16 16 456 2 425 2.22e-19 90.5
Msa1245190 AT5G22720.1 25.000 480 285 16 14 456 23 464 3.19e-19 90.5
Msa1245190 AT5G60610.2 25.349 430 253 14 13 421 1 383 3.81e-19 89.4
Msa1245190 AT5G60610.1 25.349 430 253 14 13 421 1 383 3.81e-19 89.4
Msa1245190 AT5G44950.1 28.078 463 269 23 14 448 4 430 3.91e-19 90.1
Msa1245190 AT3G42770.1 28.200 461 260 20 16 449 1 417 1.03e-18 89.4
Msa1245190 AT3G60040.4 26.829 410 256 13 14 406 13 395 3.06e-18 87.8
Msa1245190 AT3G60040.1 27.073 410 255 14 14 406 232 614 3.43e-18 88.2
Msa1245190 AT3G60040.3 27.073 410 255 14 14 406 233 615 3.53e-18 88.2
Msa1245190 AT3G60040.5 27.073 410 255 14 14 406 230 612 3.92e-18 87.8
Msa1245190 AT3G60040.2 27.073 410 255 14 14 406 232 614 4.03e-18 87.8
Msa1245190 AT1G06630.7 31.220 205 124 7 14 215 12 202 5.17e-18 85.1
Msa1245190 AT4G26350.1 25.820 488 259 20 13 457 1 428 5.52e-18 86.3
Msa1245190 AT3G26922.1 32.189 233 125 10 14 240 14 219 6.79e-18 84.7
Msa1245190 AT3G26922.2 32.189 233 125 10 14 240 14 219 6.79e-18 84.7
Msa1245190 AT1G06630.2 30.638 235 132 10 14 238 12 225 8.13e-18 85.5
Msa1245190 AT1G06630.6 30.638 235 132 10 14 238 12 225 8.13e-18 85.5
Msa1245190 AT1G06630.4 30.638 235 132 10 14 238 12 225 8.13e-18 85.5
Msa1245190 AT1G06630.3 30.638 235 132 10 14 238 12 225 8.13e-18 85.5
Msa1245190 AT1G06630.9 30.638 235 132 10 14 238 21 234 8.80e-18 85.5
Msa1245190 AT1G06630.5 30.172 232 137 9 14 238 12 225 9.94e-18 84.7
Msa1245190 AT1G06630.8 30.172 232 137 9 14 238 12 225 9.94e-18 84.7
Msa1245190 AT1G06630.1 31.220 205 124 7 14 215 12 202 1.67e-17 85.1
Msa1245190 AT5G22700.6 27.670 412 236 19 14 419 43 398 1.76e-17 84.7
Msa1245190 AT1G66310.1 25.647 464 285 16 11 454 16 439 1.98e-17 84.7
Msa1245190 AT3G59200.2 31.731 208 115 8 14 215 7 193 3.16e-17 83.6
Msa1245190 AT5G22700.2 27.294 436 248 20 14 419 6 402 4.71e-17 83.6
Msa1245190 AT5G22700.3 27.294 436 248 20 14 419 6 402 4.71e-17 83.6
Msa1245190 AT5G22700.1 27.294 436 248 20 14 419 6 402 4.71e-17 83.6
Msa1245190 AT5G22700.4 27.294 436 248 20 14 419 6 402 4.71e-17 83.6
Msa1245190 AT5G22700.5 27.294 436 248 20 14 419 43 439 6.57e-17 83.2
Msa1245190 AT4G09920.2 31.034 203 119 7 13 215 1 182 9.79e-17 80.9
Msa1245190 AT4G09920.4 31.034 203 119 7 13 215 1 182 9.79e-17 80.9
Msa1245190 AT4G09920.3 31.034 203 119 7 13 215 1 182 9.79e-17 80.9
Msa1245190 AT4G09920.1 31.034 203 119 7 13 215 1 182 1.29e-16 80.9
Msa1245190 AT4G09920.5 31.034 203 119 7 13 215 1 182 1.29e-16 80.9
Msa1245190 AT3G59200.1 31.731 208 115 8 14 215 7 193 1.48e-16 82.4
Msa1245190 AT5G56810.1 28.788 462 263 19 14 454 15 431 1.80e-16 81.6
Msa1245190 AT1G13780.1 25.826 484 275 22 14 454 10 452 3.19e-16 81.3
Msa1245190 AT5G22660.2 25.417 480 270 21 14 454 13 443 8.45e-16 79.7
Msa1245190 AT4G13965.1 27.233 459 268 20 14 454 10 420 9.45e-16 79.3
Msa1245190 AT3G52680.1 28.632 475 264 21 14 459 21 449 1.01e-15 79.7
Msa1245190 AT5G50270.1 28.211 436 247 18 13 424 1 394 2.57e-15 78.2
Msa1245190 AT4G14103.2 32.068 237 131 12 14 245 8 219 5.24e-15 77.4
Msa1245190 AT5G56380.2 23.667 469 304 15 13 457 1 439 5.39e-15 77.4
Msa1245190 AT5G56380.1 23.667 469 304 15 13 457 1 439 5.39e-15 77.4
Msa1245190 AT5G18780.2 27.371 464 278 18 14 454 11 438 6.11e-15 77.0
Msa1245190 AT5G18780.1 27.371 464 278 18 14 454 11 438 6.11e-15 77.0
Msa1245190 AT4G14103.3 32.218 239 128 12 14 245 8 219 7.52e-15 76.6
Msa1245190 AT4G14103.1 32.218 239 128 12 14 245 8 219 7.52e-15 76.6
Msa1245190 AT2G29930.3 24.748 497 270 24 14 456 12 458 1.57e-14 75.9
Msa1245190 AT2G29930.1 24.748 497 270 24 14 456 12 458 1.57e-14 75.9
Msa1245190 AT3G58820.1 35.849 159 87 6 13 163 1 152 1.77e-14 75.5
Msa1245190 AT5G56370.1 25.160 469 277 18 13 456 1 420 2.47e-14 75.1
Msa1245190 AT5G56370.2 25.160 469 277 18 13 456 1 420 2.47e-14 75.1
Msa1245190 AT5G41840.1 29.767 215 120 9 14 215 14 210 2.94e-14 75.5
Msa1245190 AT3G59190.2 31.754 211 114 8 14 215 12 201 3.36e-14 75.1
Msa1245190 AT3G59190.1 31.754 211 114 8 14 215 12 201 3.87e-14 74.3
Msa1245190 AT5G56440.1 31.731 208 111 7 13 215 1 182 4.56e-14 74.3
Msa1245190 AT2G04230.1 26.471 476 280 23 14 459 13 448 6.05e-14 73.9
Msa1245190 AT4G14096.2 25.105 474 296 22 14 458 8 451 7.44e-14 73.9
Msa1245190 AT4G14096.1 25.105 474 296 22 14 458 8 451 7.44e-14 73.9
Msa1245190 AT5G56690.1 25.481 416 244 18 16 405 4 379 8.05e-14 73.6
Msa1245190 AT5G44940.1 25.991 454 245 17 14 457 5 377 8.42e-14 73.2
Msa1245190 AT3G03040.1 34.884 172 98 5 13 179 1 163 1.18e-13 73.2
Msa1245190 AT5G22670.1 24.324 481 272 19 14 454 11 439 1.22e-13 73.2
Msa1245190 AT3G44060.1 30.000 200 123 5 16 215 1 183 5.34e-13 71.2
Msa1245190 AT3G59240.1 28.755 233 137 9 14 238 8 219 5.66e-13 71.2
Msa1245190 AT2G42720.1 30.519 308 171 16 13 310 1 275 6.93e-13 70.9
Msa1245190 AT3G59210.2 31.553 206 118 7 14 215 7 193 7.06e-13 70.9
Msa1245190 AT3G59210.1 31.553 206 118 7 14 215 7 193 7.06e-13 70.9
Msa1245190 AT3G59210.5 31.553 206 118 7 14 215 7 193 7.06e-13 70.9
Msa1245190 AT3G59210.4 31.553 206 118 7 14 215 7 193 7.06e-13 70.9
Msa1245190 AT3G59210.3 31.553 206 118 7 14 215 7 193 7.06e-13 70.9
Msa1245190 AT1G05080.1 25.536 466 284 19 14 456 13 438 7.48e-13 70.5
Msa1245190 AT1G48400.1 31.579 209 113 10 14 215 10 195 1.30e-12 70.1
Msa1245190 AT1G48400.2 31.579 209 113 10 14 215 10 195 1.54e-12 69.7
Msa1245190 AT3G59000.1 32.558 172 105 4 13 178 1 167 1.80e-12 69.7
Msa1245190 AT1G55660.1 30.622 209 120 7 11 215 50 237 1.84e-12 69.7
Msa1245190 AT1G55660.2 30.622 209 120 7 11 215 50 237 2.26e-12 68.6
Msa1245190 AT4G00315.1 31.401 207 117 7 13 215 1 186 2.36e-12 68.9
Msa1245190 AT5G56700.2 28.135 327 181 15 115 421 55 347 3.59e-12 68.2
Msa1245190 AT3G03030.2 32.044 181 107 5 13 185 1 173 4.57e-12 67.4
Msa1245190 AT3G03030.1 32.044 181 107 5 13 185 1 173 5.44e-12 68.2
Msa1245190 AT3G51530.1 26.056 426 244 19 14 416 30 407 6.70e-12 67.8
Msa1245190 AT4G15060.2 25.547 411 226 17 13 394 25 384 9.25e-12 67.4
Msa1245190 AT5G38392.1 29.167 216 118 10 13 215 1 194 9.44e-12 65.1
Msa1245190 AT1G66300.1 23.061 477 301 16 3 454 18 453 9.50e-12 67.4
Msa1245190 AT5G18780.3 35.882 170 91 8 14 181 11 164 1.33e-11 66.6
Msa1245190 AT5G18780.4 35.882 170 91 8 14 181 11 164 1.33e-11 66.6
Msa1245190 AT3G26922.3 29.954 217 119 10 30 240 1 190 1.95e-11 65.1
Msa1245190 AT3G26922.5 29.954 217 119 10 30 240 1 190 1.95e-11 65.1
Msa1245190 AT3G58940.1 29.439 214 123 7 13 215 1 197 2.01e-11 66.6
Msa1245190 AT3G58940.2 29.439 214 123 7 13 215 1 197 2.01e-11 66.6
Msa1245190 AT3G26930.2 28.033 478 261 21 14 460 21 446 2.40e-11 65.9
Msa1245190 AT3G49030.2 24.729 461 266 19 14 458 21 416 5.19e-11 64.7
Msa1245190 AT4G00320.1 28.959 221 113 10 14 215 13 208 5.49e-11 65.1
Msa1245190 AT5G56370.3 31.100 209 111 9 13 216 1 181 5.61e-11 63.9
Msa1245190 AT5G41630.1 28.372 215 120 9 14 215 12 205 6.60e-11 64.7
Msa1245190 AT3G59170.1 28.571 224 125 7 14 215 7 217 7.31e-11 64.7
Msa1245190 AT5G38390.1 32.759 174 99 6 13 185 1 157 8.25e-11 64.3

Find 130 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGCCGGTGGCGCCACCTT+TGG 0.219688 8_2:-34843648 Msa1245190:CDS
TAAAGTTACTGTGTGAAAAT+TGG 0.263937 8_2:-34843817 Msa1245190:five_prime_UTR
GGGAACTCTGGTCAAGAAAT+AGG 0.266225 8_2:+34842085 None:intergenic
TGATGCAAATTGCAAAATTC+TGG 0.267481 8_2:+34841673 None:intergenic
TTCTTCCGCCATCGCCGTTT+GGG 0.282395 8_2:+34843789 None:intergenic
TAGAACAGTTCTTGTTTGTT+AGG 0.285758 8_2:+34841240 None:intergenic
TTCGAATGTGGCGAGATTTA+CGG 0.286490 8_2:+34843521 None:intergenic
CTTCTTCCGCCATCGCCGTT+TGG 0.286985 8_2:+34843788 None:intergenic
AGGTGGGATTCAAGACATTT+AGG 0.288093 8_2:+34841383 None:intergenic
GACTAATTTATCTCAATTAC+CGG 0.297683 8_2:+34838960 None:intergenic
TCGCCGGTGGCGCCACCTTT+GGG 0.306009 8_2:-34843647 Msa1245190:CDS
AACATTGACATTGAGGATTT+CGG 0.318146 8_2:-34842185 Msa1245190:CDS
GACTCAGCTGTGTCTCTATA+AGG 0.330026 8_2:-34841164 Msa1245190:intron
GAAAGTCGAATTCAGCATAT+TGG 0.336684 8_2:-34842213 Msa1245190:CDS
GGTTGTCATGACGGAGGTTT+TGG 0.347251 8_2:+34843681 None:intergenic
GGTATCTAGAGTTTCGAGTA+TGG 0.360237 8_2:+34842118 None:intergenic
AAACCCACATTTGGCATCAT+TGG 0.367842 8_2:-34841954 Msa1245190:CDS
AATGTTCGGCAGTGCACGTT+TGG 0.373627 8_2:-34839228 Msa1245190:intron
TGCAACATCAAACCCACATT+TGG 0.375079 8_2:-34841963 Msa1245190:CDS
TCGATACTTGTCTTTCTCTC+TGG 0.381981 8_2:-34842146 Msa1245190:CDS
AATATCAGGACATGGCTAAC+TGG 0.398842 8_2:-34839083 Msa1245190:three_prime_UTR
AAACTGCCATGGTGATGATA+TGG 0.399008 8_2:-34843383 Msa1245190:CDS
AGGACATGGCTAACTGGCTT+TGG 0.411703 8_2:-34839077 Msa1245190:three_prime_UTR
ACTTTCAACATCTTTAATGA+TGG 0.412204 8_2:+34842230 None:intergenic
TTTGGCTCCCATGTTCTTGA+AGG 0.413263 8_2:+34841419 None:intergenic
AATTCAATATCAACTCTTGC+CGG 0.417124 8_2:-34838979 Msa1245190:three_prime_UTR
ATCAGTTAATTTCAACCTCT+TGG 0.417906 8_2:+34842049 None:intergenic
TTATAGCTGTGGCTTATAGT+AGG 0.420093 8_2:-34838935 Msa1245190:three_prime_UTR
TTAGGAACTGTTGTTGACTT+TGG 0.424286 8_2:+34841401 None:intergenic
CTCTTGGCAGAAGGTGGAAC+GGG 0.427619 8_2:+34842065 None:intergenic
CTCAACTACCTCCGAGATCT+AGG 0.429478 8_2:-34841858 Msa1245190:CDS
GGAACTCTGGTCAAGAAATA+GGG 0.443858 8_2:+34842086 None:intergenic
CAGAAGATTCGTGTTGAAGC+AGG 0.446767 8_2:+34841633 None:intergenic
TTCTCGATGTCATCTTCAAA+CGG 0.453560 8_2:+34839152 None:intergenic
ATTCATATAGAAGGATATCA+AGG 0.454447 8_2:-34841353 Msa1245190:CDS
GAAATAGATTCTGATGGGCT+TGG 0.454859 8_2:-34842002 Msa1245190:CDS
CCACATGTAGACACATTCTC+CGG 0.456229 8_2:+34843456 None:intergenic
GGGATTCCTGCAGTTGCAGT+TGG 0.464051 8_2:+34843591 None:intergenic
GCTCCCAAAGGTGGCGCCAC+CGG 0.466109 8_2:+34843644 None:intergenic
GCCCATCAGAATCTATTTCA+AGG 0.471743 8_2:+34842006 None:intergenic
GGATTTCGGCAAACACCTTA+CGG 0.472350 8_2:-34842171 Msa1245190:CDS
CAGCTGAGTCAAATTTAAGT+TGG 0.474643 8_2:+34841177 None:intergenic
ATGTGGCATAGGAGTGAGTC+TGG 0.481345 8_2:+34843721 None:intergenic
CTTCTATATGAATAAAAGTC+AGG 0.481744 8_2:+34841363 None:intergenic
ACATGGCTAACTGGCTTTGG+AGG 0.487649 8_2:-34839074 Msa1245190:three_prime_UTR
TTTCTGACTTTGAAAAGTTG+TGG 0.487713 8_2:-34838908 Msa1245190:three_prime_UTR
CAAGAAATAGGGAGAAAAGT+AGG 0.492659 8_2:+34842097 None:intergenic
ATCTTGAAGGTGGGGTCCAA+TGG 0.495026 8_2:+34843423 None:intergenic
TTACCTGAGGGAAACGAGAT+TGG 0.499649 8_2:+34843330 None:intergenic
GGAACACAACATTGACATTG+AGG 0.505951 8_2:-34842192 Msa1245190:CDS
GGAATGTCGATTTCTGAAGC+TGG 0.506103 8_2:-34839207 Msa1245190:three_prime_UTR
GCACCAATCTCGTTTCCCTC+AGG 0.507292 8_2:-34843333 Msa1245190:intron
TGACTCTAAATCTCGTGATA+AGG 0.507452 8_2:+34839036 None:intergenic
AACTGTCACCTTCAAGAACA+TGG 0.510013 8_2:-34841427 Msa1245190:CDS
GTAAACATCGGAGGTGCAGC+AGG 0.514352 8_2:+34843486 None:intergenic
AAATTCTGGATAATTTAGAA+TGG 0.522156 8_2:+34841687 None:intergenic
ATGTGGGTCCGTGCTGCCAT+TGG 0.525161 8_2:-34843439 Msa1245190:CDS
CTCGGAGGTAGTTGAGCATA+GGG 0.525490 8_2:+34841865 None:intergenic
CCGGAGAATGTGTCTACATG+TGG 0.528018 8_2:-34843456 Msa1245190:CDS
AGAAGGTGGAACGGGAACTC+TGG 0.530093 8_2:+34842073 None:intergenic
GATAAATTCACTTTCACGCA+AGG 0.530491 8_2:+34841890 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8_2:-34841336 Msa1245190:CDS
TAACTGATGTGAAATTCTCA+TGG 0.534368 8_2:-34842034 Msa1245190:CDS
CATTGGCGACTTGCAGAGCA+TGG 0.538592 8_2:-34841937 Msa1245190:CDS
TGCCTTGAAATAGATTCTGA+TGG 0.541668 8_2:-34842008 Msa1245190:CDS
GTAAATCACCACCTAGATCT+CGG 0.543700 8_2:+34841847 None:intergenic
TTCAACCTCTTGGCAGAAGG+TGG 0.544820 8_2:+34842059 None:intergenic
GTATCTAGAGTTTCGAGTAT+GGG 0.545984 8_2:+34842119 None:intergenic
AATGAGACTGGTTGTCATGA+CGG 0.549849 8_2:+34843672 None:intergenic
GAGAGACAAATCTTGAAGGT+GGG 0.551283 8_2:+34843414 None:intergenic
GTCGCCAATGATGCCAAATG+TGG 0.552977 8_2:+34841950 None:intergenic
ACGAGTCCAACTGCAACTGC+AGG 0.555167 8_2:-34843597 Msa1245190:CDS
AATTTCAACCTCTTGGCAGA+AGG 0.555823 8_2:+34842056 None:intergenic
TATTGAGAGACAAATCTTGA+AGG 0.559357 8_2:+34843410 None:intergenic
GATGGGCTTGGTATAGAGTA+CGG 0.560809 8_2:-34841990 Msa1245190:CDS
CCGTTCCACCTTCTGCCAAG+AGG 0.561402 8_2:-34842064 Msa1245190:CDS
TCTCGGAGGTAGTTGAGCAT+AGG 0.566965 8_2:+34841864 None:intergenic
CTCAATATTACAAACTGCCA+TGG 0.567570 8_2:-34843394 Msa1245190:CDS
TTCTGGATAATTTAGAATGG+AGG 0.569635 8_2:+34841690 None:intergenic
GTGCAATTCAAGAGGGAAGG+AGG 0.570678 8_2:+34843352 None:intergenic
CCTCTTGGCAGAAGGTGGAA+CGG 0.574775 8_2:+34842064 None:intergenic
GCCTTGAAATAGATTCTGAT+GGG 0.576126 8_2:-34842007 Msa1245190:CDS
AGAGACAAATCTTGAAGGTG+GGG 0.579971 8_2:+34843415 None:intergenic
TAGGAAGGAATGATAGGATG+TGG 0.580585 8_2:+34843704 None:intergenic
CGAGATTGGTGCAATTCAAG+AGG 0.585120 8_2:+34843344 None:intergenic
TGGAGTGACCCAAACGGCGA+TGG 0.585163 8_2:-34843797 Msa1245190:exon
AAGATTAACTGATATACCAA+GGG 0.586408 8_2:-34841213 Msa1245190:CDS
TGAGAGACAAATCTTGAAGG+TGG 0.586669 8_2:+34843413 None:intergenic
GAAAATTGGAGTGACCCAAA+CGG 0.588906 8_2:-34843803 Msa1245190:five_prime_UTR
AGTGACCCAAACGGCGATGG+CGG 0.589276 8_2:-34843794 Msa1245190:exon
CGTTTAGATGCTCCCAAAGG+TGG 0.589564 8_2:+34843635 None:intergenic
AAATTAGTCAATTATAGCTG+TGG 0.597112 8_2:-34838946 Msa1245190:three_prime_UTR
TCTCATAATTCAGAGTAGCA+AGG 0.602330 8_2:-34841575 Msa1245190:intron
CACATGTAGACACATTCTCC+GGG 0.602843 8_2:+34843457 None:intergenic
AAAGATTAACTGATATACCA+AGG 0.603237 8_2:-34841214 Msa1245190:CDS
CCACCGGCGAGAAATGAGAC+TGG 0.605674 8_2:+34843660 None:intergenic
TATCTAGAGTTTCGAGTATG+GGG 0.605751 8_2:+34842120 None:intergenic
AATTGGCTAATATCAGGACA+TGG 0.606301 8_2:-34839091 Msa1245190:three_prime_UTR
GGAATGATAGGATGTGGCAT+AGG 0.607252 8_2:+34843710 None:intergenic
TGCAATTCAAGAGGGAAGGA+GGG 0.610260 8_2:+34843353 None:intergenic
TGGCATGTGACAGAGCCCCT+TGG 0.611510 8_2:+34841197 None:intergenic
CAACCAGTCTCATTTCTCGC+CGG 0.613601 8_2:-34843663 Msa1245190:CDS
TATATGAATAAAAGTCAGGT+GGG 0.613627 8_2:+34841367 None:intergenic
AGACAAGTATCGAATCCGTA+AGG 0.614421 8_2:+34842156 None:intergenic
TTGGTGCAATTCAAGAGGGA+AGG 0.614725 8_2:+34843349 None:intergenic
AGAAGATTCGTGTTGAAGCA+GGG 0.616763 8_2:+34841634 None:intergenic
GGTGGGGTCCAATGGCAGCA+CGG 0.623491 8_2:+34843431 None:intergenic
CGGAGAATGTGTCTACATGT+GGG 0.624898 8_2:-34843455 Msa1245190:CDS
CTATATGAATAAAAGTCAGG+TGG 0.625941 8_2:+34841366 None:intergenic
TCTGCGTCATTCGACATCAA+AGG 0.627655 8_2:-34841817 Msa1245190:intron
ACATTACTGAGTCGTAATCA+CGG 0.635537 8_2:+34839005 None:intergenic
TCGCCAATGATGCCAAATGT+GGG 0.638534 8_2:+34841951 None:intergenic
ACAACGCCGATGTCATCGAT+AGG 0.638817 8_2:-34843756 Msa1245190:CDS
TCCGGGAAAACTGTAAACAT+CGG 0.646181 8_2:+34843474 None:intergenic
GAGATTGGTGCAATTCAAGA+GGG 0.651966 8_2:+34843345 None:intergenic
GAATGTGGCGAGATTTACGG+AGG 0.663346 8_2:+34843524 None:intergenic
ACTGTCACCTTCAAGAACAT+GGG 0.664797 8_2:-34841426 Msa1245190:CDS
CATGTTTGCTCAGATGCTTG+AGG 0.671266 8_2:-34839177 Msa1245190:three_prime_UTR
ACTCATCCTATCGATGACAT+CGG 0.671936 8_2:+34843750 None:intergenic
TTTAGAATGGAGGTGCGAAG+CGG 0.678446 8_2:+34841700 None:intergenic
GATAAACCATATCATCACCA+TGG 0.684982 8_2:+34843377 None:intergenic
GGGAAAACTGTAAACATCGG+AGG 0.685985 8_2:+34843477 None:intergenic
AGACGTTTAGATGCTCCCAA+AGG 0.690304 8_2:+34843632 None:intergenic
GAGACTGGTTGTCATGACGG+AGG 0.691854 8_2:+34843675 None:intergenic
AATGTGGCGAGATTTACGGA+GGG 0.699134 8_2:+34843525 None:intergenic
AACTACCTCCGAGATCTAGG+TGG 0.714851 8_2:-34841855 Msa1245190:CDS
AGATTAACTGATATACCAAG+GGG 0.725053 8_2:-34841212 Msa1245190:CDS
TGGCGACTTGCAGAGCATGG+AGG 0.730260 8_2:-34841934 Msa1245190:CDS
AATCACCACCTAGATCTCGG+AGG 0.782019 8_2:+34841850 None:intergenic
GGGCTTGGTATAGAGTACGG+TGG 0.786992 8_2:-34841987 Msa1245190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTTAATCATATGAAAT+TGG - chr8_2:34840138-34840157 Msa1245190:intron 10.0%
!! AAAAAAATAAACAAATTTGG+AGG - chr8_2:34839746-34839765 Msa1245190:intron 15.0%
!!! AGTTTGAGTATTTTTTTATA+GGG - chr8_2:34839880-34839899 Msa1245190:intron 15.0%
!!! ACTTCATAAAAATGAATTTT+TGG + chr8_2:34840251-34840270 None:intergenic 15.0%
!! TTAAAAATATAAAGAGAACA+AGG + chr8_2:34840313-34840332 None:intergenic 15.0%
!!! GGTTAAATTAAATCAATTTT+TGG - chr8_2:34841139-34841158 Msa1245190:intron 15.0%
!! TAACTAAATCAAATACAAAT+TGG + chr8_2:34841914-34841933 None:intergenic 15.0%
!!! ATTTTCATTATAATCCTATT+TGG - chr8_2:34841935-34841954 Msa1245190:CDS 15.0%
!! TTCATTTGTAGAATAAAATA+TGG + chr8_2:34842487-34842506 None:intergenic 15.0%
!!! TAATTTTTTTTTTCTTTAGC+AGG - chr8_2:34842710-34842729 Msa1245190:intron 15.0%
!! ATATTTGTATCACATTATAA+AGG - chr8_2:34843341-34843360 Msa1245190:CDS 15.0%
!!! GCTTTAAATAGAATCAATTT+TGG - chr8_2:34839549-34839568 Msa1245190:intron 20.0%
!!! GAGTTTGAGTATTTTTTTAT+AGG - chr8_2:34839879-34839898 Msa1245190:intron 20.0%
!!! GTTTGAGTATTTTTTTATAG+GGG - chr8_2:34839881-34839900 Msa1245190:intron 20.0%
!!! TATTTTTTTATAGGGGATTA+AGG - chr8_2:34839888-34839907 Msa1245190:intron 20.0%
!!! ATTTTTTTATAGGGGATTAA+GGG - chr8_2:34839889-34839908 Msa1245190:intron 20.0%
!!! TCAATTTTAAACTTGATATC+CGG + chr8_2:34840076-34840095 None:intergenic 20.0%
!! TAAATATGGAAATGAAAACT+TGG - chr8_2:34840177-34840196 Msa1245190:intron 20.0%
!!! TTTGGATATCATTTTCTTTA+TGG + chr8_2:34840233-34840252 None:intergenic 20.0%
!!! CAGAATGTTGAAATTTTAAA+TGG + chr8_2:34840415-34840434 None:intergenic 20.0%
!!! AAGGTGAAGTTTTATTATTA+TGG - chr8_2:34840878-34840897 Msa1245190:intron 20.0%
!! AAATTCTGGATAATTTAGAA+TGG + chr8_2:34840992-34841011 None:intergenic 20.0%
!!! ATTTCAGTATCTTTTCAATA+TGG - chr8_2:34841712-34841731 Msa1245190:intron 20.0%
!! AATACAAATTGGATATTCTA+GGG + chr8_2:34841903-34841922 None:intergenic 20.0%
!! AAATACAAATTGGATATTCT+AGG + chr8_2:34841904-34841923 None:intergenic 20.0%
!!! ATTATAATCCTATTTGGAAT+TGG - chr8_2:34841941-34841960 Msa1245190:CDS 20.0%
!! TTAAACATGAATAGTAATAG+GGG + chr8_2:34842000-34842019 None:intergenic 20.0%
!! CTTAAACATGAATAGTAATA+GGG + chr8_2:34842001-34842020 None:intergenic 20.0%
!! TCTTAAACATGAATAGTAAT+AGG + chr8_2:34842002-34842021 None:intergenic 20.0%
!! ATAGACAATGATTTAGAAAT+TGG + chr8_2:34842178-34842197 None:intergenic 20.0%
!! TTTCTAAATCATTGTCTATT+TGG - chr8_2:34842179-34842198 Msa1245190:CDS 20.0%
!! TTCTAAATCATTGTCTATTT+GGG - chr8_2:34842180-34842199 Msa1245190:CDS 20.0%
!! TATTATAACAAAAAGATGTG+TGG + chr8_2:34842230-34842249 None:intergenic 20.0%
!! AAAAGTTTAAATATATCGAC+CGG + chr8_2:34842359-34842378 None:intergenic 20.0%
!!! TTAGAACTAGTTTACAAAAA+TGG + chr8_2:34842428-34842447 None:intergenic 20.0%
!! TAGAATAAAATATGGTTGAA+TGG + chr8_2:34842479-34842498 None:intergenic 20.0%
!! ATATGATTTCATATTAGAGT+TGG + chr8_2:34842571-34842590 None:intergenic 20.0%
!! ATTATTGAAAATGACATTCT+CGG + chr8_2:34842891-34842910 None:intergenic 20.0%
!! GTTATCTAATAACCAATAAA+AGG + chr8_2:34843223-34843242 None:intergenic 20.0%
!!! TTTTTTAATTGGCTAATATC+AGG - chr8_2:34843579-34843598 Msa1245190:CDS 20.0%
!!! AGTTTTGTTTTGGCTTTAAA+TGG - chr8_2:34839683-34839702 Msa1245190:intron 25.0%
!!! GTTTTGTTTTGGCTTTAAAT+GGG - chr8_2:34839684-34839703 Msa1245190:intron 25.0%
!!! TTTTGTTTTGGCTTTAAATG+GGG - chr8_2:34839685-34839704 Msa1245190:intron 25.0%
!!! AGGTGTAAAATTGATTTGTT+TGG + chr8_2:34839797-34839816 None:intergenic 25.0%
!! AGAAGTCAAAGTTGATTTAA+AGG + chr8_2:34839817-34839836 None:intergenic 25.0%
! TATACATCTTAGTGTATGTT+TGG + chr8_2:34839852-34839871 None:intergenic 25.0%
! AAAAAAATACTCAAACTCCA+GGG + chr8_2:34839877-34839896 None:intergenic 25.0%
! TAAAAAAATACTCAAACTCC+AGG + chr8_2:34839878-34839897 None:intergenic 25.0%
!!! GCATTGTCATGTTTTAAATA+TGG - chr8_2:34840163-34840182 Msa1245190:intron 25.0%
! ACTTTCAACATCTTTAATGA+TGG + chr8_2:34840449-34840468 None:intergenic 25.0%
! AATATAATTGAGTCATTGTG+TGG - chr8_2:34841208-34841227 Msa1245190:CDS 25.0%
! TATATGAATAAAAGTCAGGT+GGG + chr8_2:34841312-34841331 None:intergenic 25.0%
! CTTCTATATGAATAAAAGTC+AGG + chr8_2:34841316-34841335 None:intergenic 25.0%
!! CTGACTTTTATTCATATAGA+AGG - chr8_2:34841314-34841333 Msa1245190:CDS 25.0%
! ATTCATATAGAAGGATATCA+AGG - chr8_2:34841323-34841342 Msa1245190:CDS 25.0%
!!! CATTTTTTTCGATACTTCAA+TGG - chr8_2:34841412-34841431 Msa1245190:CDS 25.0%
! AAAGATTAACTGATATACCA+AGG - chr8_2:34841462-34841481 Msa1245190:intron 25.0%
! AAGATTAACTGATATACCAA+GGG - chr8_2:34841463-34841482 Msa1245190:intron 25.0%
! AAATTAATGATGGTTAAGAC+TGG - chr8_2:34841576-34841595 Msa1245190:CDS 25.0%
! AATTAATGATGGTTAAGACT+GGG - chr8_2:34841577-34841596 Msa1245190:CDS 25.0%
!!! TTAGAAGTGTTTCATGATAT+AGG - chr8_2:34841614-34841633 Msa1245190:CDS 25.0%
!!! GTTTGAGAGAAATTTTGAAA+AGG + chr8_2:34841740-34841759 None:intergenic 25.0%
! CCACAAAATAGTTAAAAATG+CGG + chr8_2:34841859-34841878 None:intergenic 25.0%
! ATACAAATTGGATATTCTAG+GGG + chr8_2:34841902-34841921 None:intergenic 25.0%
! TATCTTGTTCACTAATATTC+AGG - chr8_2:34842079-34842098 Msa1245190:CDS 25.0%
! TCTAAATCATTGTCTATTTG+GGG - chr8_2:34842181-34842200 Msa1245190:CDS 25.0%
! AAATGGTCAAAAAAACTTAG+CGG + chr8_2:34842411-34842430 None:intergenic 25.0%
!! TTTATGTCATTTGCATTTGT+TGG - chr8_2:34842621-34842640 Msa1245190:intron 25.0%
!! TTATGTCATTTGCATTTGTT+GGG - chr8_2:34842622-34842641 Msa1245190:intron 25.0%
! AAAAAAATTAACAAGAGCTC+AGG + chr8_2:34842700-34842719 None:intergenic 25.0%
! TTCACAAAATTTGCAATGAT+TGG + chr8_2:34842933-34842952 None:intergenic 25.0%
!! GTTTCGATTTTCAAAGTTTA+TGG - chr8_2:34843061-34843080 Msa1245190:intron 25.0%
! ACAATTGTCTAACAAAAAGT+GGG + chr8_2:34843124-34843143 None:intergenic 25.0%
! AACAATTGTCTAACAAAAAG+TGG + chr8_2:34843125-34843144 None:intergenic 25.0%
!! ACATTATAAAGGCATAGTTT+AGG - chr8_2:34843352-34843371 Msa1245190:CDS 25.0%
!! TTGTTAGTAGTAAACTTTTG+TGG - chr8_2:34843402-34843421 Msa1245190:CDS 25.0%
!! TGTTAGTAGTAAACTTTTGT+GGG - chr8_2:34843403-34843422 Msa1245190:CDS 25.0%
!!! AGTTCGCATGTTTTTTTAAT+TGG - chr8_2:34843568-34843587 Msa1245190:CDS 25.0%
! GACTAATTTATCTCAATTAC+CGG + chr8_2:34843719-34843738 None:intergenic 25.0%
! AAATTAGTCAATTATAGCTG+TGG - chr8_2:34843730-34843749 Msa1245190:CDS 25.0%
! GCAAACTTTCTGAACTTTTT+GGG + chr8_2:34839108-34839127 None:intergenic 30.0%
! TGCAAACTTTCTGAACTTTT+TGG + chr8_2:34839109-34839128 None:intergenic 30.0%
! TGAGATGAAATTTTCGAATG+TGG + chr8_2:34839170-34839189 None:intergenic 30.0%
TATTGAGAGACAAATCTTGA+AGG + chr8_2:34839269-34839288 None:intergenic 30.0%
! GTGATGAAAGCATGAAATTA+GGG + chr8_2:34839372-34839391 None:intergenic 30.0%
! TGTGATGAAAGCATGAAATT+AGG + chr8_2:34839373-34839392 None:intergenic 30.0%
! AAACACAACTCTCTTTTAGT+CGG + chr8_2:34839455-34839474 None:intergenic 30.0%
AAAAAATACTCAAACTCCAG+GGG + chr8_2:34839876-34839895 None:intergenic 30.0%
AACCCAACACAAAAATTGAT+GGG + chr8_2:34839968-34839987 None:intergenic 30.0%
TAACCCAACACAAAAATTGA+TGG + chr8_2:34839969-34839988 None:intergenic 30.0%
! CATTTTCTTTATGGTGCATA+TGG + chr8_2:34840224-34840243 None:intergenic 30.0%
! AATGTTTTCAAAAGACAGGT+TGG + chr8_2:34840373-34840392 None:intergenic 30.0%
! TGAAAACATTGCAGTCTTTT+TGG - chr8_2:34840383-34840402 Msa1245190:intron 30.0%
AACATTGACATTGAGGATTT+CGG - chr8_2:34840491-34840510 Msa1245190:intron 30.0%
ATCAGTTAATTTCAACCTCT+TGG + chr8_2:34840630-34840649 None:intergenic 30.0%
TAACTGATGTGAAATTCTCA+TGG - chr8_2:34840642-34840661 Msa1245190:intron 30.0%
! TTCTGGATAATTTAGAATGG+AGG + chr8_2:34840989-34841008 None:intergenic 30.0%
TGATGCAAATTGCAAAATTC+TGG + chr8_2:34841006-34841025 None:intergenic 30.0%
CTATATGAATAAAAGTCAGG+TGG + chr8_2:34841313-34841332 None:intergenic 30.0%
! GCTGAATATATTTTGCGTAA+CGG - chr8_2:34841368-34841387 Msa1245190:CDS 30.0%
! TAGAACAGTTCTTGTTTGTT+AGG + chr8_2:34841439-34841458 None:intergenic 30.0%
AGATTAACTGATATACCAAG+GGG - chr8_2:34841464-34841483 Msa1245190:intron 30.0%
!!! CATTCTCTCTCTTTTTTATG+CGG - chr8_2:34841547-34841566 Msa1245190:intron 30.0%
!! CATCCAATTTTAGTGGAAAT+CGG + chr8_2:34841804-34841823 None:intergenic 30.0%
!! CCGCATTTTTAACTATTTTG+TGG - chr8_2:34841856-34841875 Msa1245190:CDS 30.0%
TTAAGAATTTCAAGCTTTGC+AGG - chr8_2:34842016-34842035 Msa1245190:CDS 30.0%
TATAACTAAGTTGCAACAAG+TGG + chr8_2:34842125-34842144 None:intergenic 30.0%
CAACTTAGTTATATTGTGCT+GGG - chr8_2:34842132-34842151 Msa1245190:CDS 30.0%
AAAGTTGACAATATTTCCTC+AGG + chr8_2:34842300-34842319 None:intergenic 30.0%
AATTGTTAAGCGACTTTAGT+AGG - chr8_2:34842446-34842465 Msa1245190:intron 30.0%
GCAAAACATTAACAAAAGGA+GGG + chr8_2:34842780-34842799 None:intergenic 30.0%
TGCAAAACATTAACAAAAGG+AGG + chr8_2:34842781-34842800 None:intergenic 30.0%
GCATGCAAAACATTAACAAA+AGG + chr8_2:34842784-34842803 None:intergenic 30.0%
! TAATGTTTTGCATGCTTTGT+AGG - chr8_2:34842789-34842808 Msa1245190:intron 30.0%
! AACTTCTTTTACTGCAGAAA+AGG - chr8_2:34843098-34843117 Msa1245190:intron 30.0%
ACAACAGATTATTAGAGCTT+TGG + chr8_2:34843177-34843196 None:intergenic 30.0%
AATAAAAGGCAAGTCGTAAA+TGG + chr8_2:34843209-34843228 None:intergenic 30.0%
! ATTTACGACTTGCCTTTTAT+TGG - chr8_2:34843208-34843227 Msa1245190:intron 30.0%
! AACTTTTGCTGCTAAATGTT+CGG - chr8_2:34843434-34843453 Msa1245190:CDS 30.0%
AATTCAATATCAACTCTTGC+CGG - chr8_2:34843697-34843716 Msa1245190:CDS 30.0%
! TTTCTGACTTTGAAAAGTTG+TGG - chr8_2:34843768-34843787 Msa1245190:CDS 30.0%
! TTTTGGTAGGAAGGAATGAT+AGG + chr8_2:34838981-34839000 None:intergenic 35.0%
CTCAATATTACAAACTGCCA+TGG - chr8_2:34839282-34839301 Msa1245190:intron 35.0%
GATAAACCATATCATCACCA+TGG + chr8_2:34839302-34839321 None:intergenic 35.0%
ATGAAATTAGGGTTACCTGA+GGG + chr8_2:34839361-34839380 None:intergenic 35.0%
GACTAAAAGAGAGTTGTGTT+TGG - chr8_2:34839454-34839473 Msa1245190:intron 35.0%
TTGGAGTAAAAACACCCATT+TGG - chr8_2:34839568-34839587 Msa1245190:intron 35.0%
TGGAGTAAAAACACCCATTT+GGG - chr8_2:34839569-34839588 Msa1245190:intron 35.0%
TAGAGGGAATCAAATTTGAG+AGG + chr8_2:34839633-34839652 None:intergenic 35.0%
!!! GTCCATGCAAAGTTTTGTTT+TGG - chr8_2:34839673-34839692 Msa1245190:intron 35.0%
AGCCAAAACAAAACTTTGCA+TGG + chr8_2:34839678-34839697 None:intergenic 35.0%
! AACTTTGACTTCTCTAGAAG+TGG - chr8_2:34839824-34839843 Msa1245190:intron 35.0%
TTTATAGGGGATTAAGGGTT+AGG - chr8_2:34839894-34839913 Msa1245190:intron 35.0%
TTATAGGGGATTAAGGGTTA+GGG - chr8_2:34839895-34839914 Msa1245190:intron 35.0%
! ATCCCCATCAATTTTTGTGT+TGG - chr8_2:34839962-34839981 Msa1245190:intron 35.0%
! TCCCCATCAATTTTTGTGTT+GGG - chr8_2:34839963-34839982 Msa1245190:intron 35.0%
ACCCAACACAAAAATTGATG+GGG + chr8_2:34839967-34839986 None:intergenic 35.0%
! CTGCAATGTTTTCAAAAGAC+AGG + chr8_2:34840377-34840396 None:intergenic 35.0%
GAAAGTCGAATTCAGCATAT+TGG - chr8_2:34840463-34840482 Msa1245190:intron 35.0%
! TATCTAGAGTTTCGAGTATG+GGG + chr8_2:34840559-34840578 None:intergenic 35.0%
! GTATCTAGAGTTTCGAGTAT+GGG + chr8_2:34840560-34840579 None:intergenic 35.0%
CAAGAAATAGGGAGAAAAGT+AGG + chr8_2:34840582-34840601 None:intergenic 35.0%
TGCCTTGAAATAGATTCTGA+TGG - chr8_2:34840668-34840687 Msa1245190:intron 35.0%
GCCTTGAAATAGATTCTGAT+GGG - chr8_2:34840669-34840688 Msa1245190:intron 35.0%
GATAAATTCACTTTCACGCA+AGG + chr8_2:34840789-34840808 None:intergenic 35.0%
TTGTACACGATAACAAGTGA+TGG + chr8_2:34840949-34840968 None:intergenic 35.0%
TCTCATAATTCAGAGTAGCA+AGG - chr8_2:34841101-34841120 Msa1245190:intron 35.0%
!! TTAGGAACTGTTGTTGACTT+TGG + chr8_2:34841278-34841297 None:intergenic 35.0%
CAGCTGAGTCAAATTTAAGT+TGG + chr8_2:34841502-34841521 None:intergenic 35.0%
GCGGTGTACTAAATTAATGA+TGG - chr8_2:34841566-34841585 Msa1245190:intron 35.0%
CTGTTAGATAGTGATGTAGT+TGG - chr8_2:34841650-34841669 Msa1245190:CDS 35.0%
! CAAGGTACATCCAATTTTAG+TGG + chr8_2:34841811-34841830 None:intergenic 35.0%
GACATGCATGTAAAAACACA+AGG + chr8_2:34841829-34841848 None:intergenic 35.0%
!! GTGTTTTTACATGCATGTCA+TGG - chr8_2:34841830-34841849 Msa1245190:CDS 35.0%
GCAACTTAGTTATATTGTGC+TGG - chr8_2:34842131-34842150 Msa1245190:CDS 35.0%
TTGATCTTCTATTAAGCCTG+AGG - chr8_2:34842281-34842300 Msa1245190:CDS 35.0%
TTTAAATATATCGACCGGAC+AGG + chr8_2:34842354-34842373 None:intergenic 35.0%
TTAAGCGACTTTAGTAGGTT+AGG - chr8_2:34842451-34842470 Msa1245190:intron 35.0%
GGTATCTCTAATGTAAGTCT+TGG + chr8_2:34842550-34842569 None:intergenic 35.0%
AGCATTACTGTGCATTTCAA+GGG + chr8_2:34842668-34842687 None:intergenic 35.0%
AAGCATTACTGTGCATTTCA+AGG + chr8_2:34842669-34842688 None:intergenic 35.0%
AGCGGAAAATATCAAATGTG+TGG + chr8_2:34842746-34842765 None:intergenic 35.0%
AAACATTAACAAAAGGAGGG+AGG + chr8_2:34842777-34842796 None:intergenic 35.0%
! CAATTGATAACAACACCTGA+TGG + chr8_2:34842818-34842837 None:intergenic 35.0%
TTCAATCCATAGGCATAATC+GGG + chr8_2:34843298-34843317 None:intergenic 35.0%
GTTCAATCCATAGGCATAAT+CGG + chr8_2:34843299-34843318 None:intergenic 35.0%
TTCTCGATGTCATCTTCAAA+CGG + chr8_2:34843527-34843546 None:intergenic 35.0%
AATTGGCTAATATCAGGACA+TGG - chr8_2:34843585-34843604 Msa1245190:CDS 35.0%
TGACTCTAAATCTCGTGATA+AGG + chr8_2:34843643-34843662 None:intergenic 35.0%
ACATTACTGAGTCGTAATCA+CGG + chr8_2:34843674-34843693 None:intergenic 35.0%
TTATAGCTGTGGCTTATAGT+AGG - chr8_2:34843741-34843760 Msa1245190:CDS 35.0%
! GTTTTGCGACTCAAAATCTT+AGG + chr8_2:34843812-34843831 None:intergenic 35.0%
!! AAGATTTTGAGTCGCAAAAC+AGG - chr8_2:34843812-34843831 Msa1245190:five_prime_UTR 35.0%
GAAAATTGGAGTGACCCAAA+CGG - chr8_2:34838873-34838892 Msa1245190:three_prime_UTR 40.0%
ACTCATCCTATCGATGACAT+CGG + chr8_2:34838929-34838948 None:intergenic 40.0%
TAGGAAGGAATGATAGGATG+TGG + chr8_2:34838975-34838994 None:intergenic 40.0%
! AATGAGACTGGTTGTCATGA+CGG + chr8_2:34839007-34839026 None:intergenic 40.0%
TTCGAATGTGGCGAGATTTA+CGG + chr8_2:34839158-34839177 None:intergenic 40.0%
! TCCGATGTTTACAGTTTTCC+CGG - chr8_2:34839201-34839220 Msa1245190:three_prime_UTR 40.0%
TCCGGGAAAACTGTAAACAT+CGG + chr8_2:34839205-34839224 None:intergenic 40.0%
AGAGACAAATCTTGAAGGTG+GGG + chr8_2:34839264-34839283 None:intergenic 40.0%
GAGAGACAAATCTTGAAGGT+GGG + chr8_2:34839265-34839284 None:intergenic 40.0%
TGAGAGACAAATCTTGAAGG+TGG + chr8_2:34839266-34839285 None:intergenic 40.0%
! AAACTGCCATGGTGATGATA+TGG - chr8_2:34839293-34839312 Msa1245190:intron 40.0%
GAGATTGGTGCAATTCAAGA+GGG + chr8_2:34839334-34839353 None:intergenic 40.0%
CATGAAATTAGGGTTACCTG+AGG + chr8_2:34839362-34839381 None:intergenic 40.0%
GGAGTAAAAACACCCATTTG+GGG - chr8_2:34839570-34839589 Msa1245190:intron 40.0%
! TAAAAACACCCATTTGGGGT+TGG - chr8_2:34839574-34839593 Msa1245190:intron 40.0%
ATTCCCTCTACTGCCAATTT+CGG - chr8_2:34839643-34839662 Msa1245190:intron 40.0%
ACACTAAGATGTATAACCCC+TGG - chr8_2:34839857-34839876 Msa1245190:intron 40.0%
! ATAGAGAAGAGCACACTCAT+AGG + chr8_2:34839928-34839947 None:intergenic 40.0%
!! AACTTTGCTCTGGCTTTGAT+TGG - chr8_2:34839999-34840018 Msa1245190:intron 40.0%
TGATTGGACCTAGTAGTGAA+CGG - chr8_2:34840015-34840034 Msa1245190:intron 40.0%
TAAACTTGATATCCGGACCA+AGG + chr8_2:34840069-34840088 None:intergenic 40.0%
GGAACACAACATTGACATTG+AGG - chr8_2:34840484-34840503 Msa1245190:intron 40.0%
!! AGACAAGTATCGAATCCGTA+AGG + chr8_2:34840523-34840542 None:intergenic 40.0%
TCGATACTTGTCTTTCTCTC+TGG - chr8_2:34840530-34840549 Msa1245190:intron 40.0%
! GGTATCTAGAGTTTCGAGTA+TGG + chr8_2:34840561-34840580 None:intergenic 40.0%
GGAACTCTGGTCAAGAAATA+GGG + chr8_2:34840593-34840612 None:intergenic 40.0%
AATTTCAACCTCTTGGCAGA+AGG + chr8_2:34840623-34840642 None:intergenic 40.0%
GCCCATCAGAATCTATTTCA+AGG + chr8_2:34840673-34840692 None:intergenic 40.0%
!! GAAATAGATTCTGATGGGCT+TGG - chr8_2:34840674-34840693 Msa1245190:intron 40.0%
TGCAACATCAAACCCACATT+TGG - chr8_2:34840713-34840732 Msa1245190:intron 40.0%
AAACCCACATTTGGCATCAT+TGG - chr8_2:34840722-34840741 Msa1245190:intron 40.0%
GTAAATCACCACCTAGATCT+CGG + chr8_2:34840832-34840851 None:intergenic 40.0%
AGAAGATTCGTGTTGAAGCA+GGG + chr8_2:34841045-34841064 None:intergenic 40.0%
AACTGTCACCTTCAAGAACA+TGG - chr8_2:34841249-34841268 Msa1245190:CDS 40.0%
ACTGTCACCTTCAAGAACAT+GGG - chr8_2:34841250-34841269 Msa1245190:CDS 40.0%
AGGTGGGATTCAAGACATTT+AGG + chr8_2:34841296-34841315 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG - chr8_2:34841340-34841359 Msa1245190:CDS 40.0%
! ATGAGGAGAGTATGGGAAAA+AGG + chr8_2:34841778-34841797 None:intergenic 40.0%
!! CCAATTTTAGTGGAAATCGG+AGG + chr8_2:34841801-34841820 None:intergenic 40.0%
CCTCCGATTTCCACTAAAAT+TGG - chr8_2:34841798-34841817 Msa1245190:intron 40.0%
! ACAGAGCACCAATTCCAAAT+AGG + chr8_2:34841952-34841971 None:intergenic 40.0%
AATTTCAAGCTTTGCAGGAG+TGG - chr8_2:34842021-34842040 Msa1245190:CDS 40.0%
! TCATTGTCTATTTGGGGCAT+TGG - chr8_2:34842187-34842206 Msa1245190:CDS 40.0%
AGATGTGTGGATTCACAGAA+GGG + chr8_2:34842217-34842236 None:intergenic 40.0%
AAGATGTGTGGATTCACAGA+AGG + chr8_2:34842218-34842237 None:intergenic 40.0%
TGGTCAAAAAAACTTAGCGG+AGG + chr8_2:34842408-34842427 None:intergenic 40.0%
ATGCTTTGTAGGTATCCATC+AGG - chr8_2:34842800-34842819 Msa1245190:intron 40.0%
GTAAATCCCGATTATGCCTA+TGG - chr8_2:34843289-34843308 Msa1245190:intron 40.0%
GAACTGATGCGACTTACTAT+TGG - chr8_2:34843315-34843334 Msa1245190:intron 40.0%
AATATCAGGACATGGCTAAC+TGG - chr8_2:34843593-34843612 Msa1245190:CDS 40.0%
GGAATGATAGGATGTGGCAT+AGG + chr8_2:34838969-34838988 None:intergenic 45.0%
AGACGTTTAGATGCTCCCAA+AGG + chr8_2:34839047-34839066 None:intergenic 45.0%
AATGTGGCGAGATTTACGGA+GGG + chr8_2:34839154-34839173 None:intergenic 45.0%
GGGAAAACTGTAAACATCGG+AGG + chr8_2:34839202-34839221 None:intergenic 45.0%
CACATGTAGACACATTCTCC+GGG + chr8_2:34839222-34839241 None:intergenic 45.0%
CCACATGTAGACACATTCTC+CGG + chr8_2:34839223-34839242 None:intergenic 45.0%
CGGAGAATGTGTCTACATGT+GGG - chr8_2:34839221-34839240 Msa1245190:intron 45.0%
TGCAATTCAAGAGGGAAGGA+GGG + chr8_2:34839326-34839345 None:intergenic 45.0%
TTGGTGCAATTCAAGAGGGA+AGG + chr8_2:34839330-34839349 None:intergenic 45.0%
CGAGATTGGTGCAATTCAAG+AGG + chr8_2:34839335-34839354 None:intergenic 45.0%
TTACCTGAGGGAAACGAGAT+TGG + chr8_2:34839349-34839368 None:intergenic 45.0%
GGGATTAAGGGTTAGGGTTT+GGG - chr8_2:34839901-34839920 Msa1245190:intron 45.0%
GTCCATACACAACTTTGCTC+TGG - chr8_2:34839989-34840008 Msa1245190:intron 45.0%
AGCCAGAGCAAAGTTGTGTA+TGG + chr8_2:34839994-34840013 None:intergenic 45.0%
CAACTCAACCGTTCACTACT+AGG + chr8_2:34840026-34840045 None:intergenic 45.0%
CTAGTAGTGAACGGTTGAGT+TGG - chr8_2:34840024-34840043 Msa1245190:intron 45.0%
!! GTTGAGTTGGTCTGCAGATT+AGG - chr8_2:34840037-34840056 Msa1245190:intron 45.0%
GGATTTCGGCAAACACCTTA+CGG - chr8_2:34840505-34840524 Msa1245190:intron 45.0%
GGGAACTCTGGTCAAGAAAT+AGG + chr8_2:34840594-34840613 None:intergenic 45.0%
! GATGGGCTTGGTATAGAGTA+CGG - chr8_2:34840686-34840705 Msa1245190:intron 45.0%
TCGCCAATGATGCCAAATGT+GGG + chr8_2:34840728-34840747 None:intergenic 45.0%
TCTGCGTCATTCGACATCAA+AGG - chr8_2:34840859-34840878 Msa1245190:intron 45.0%
! TTTAGAATGGAGGTGCGAAG+CGG + chr8_2:34840979-34840998 None:intergenic 45.0%
CAGAAGATTCGTGTTGAAGC+AGG + chr8_2:34841046-34841065 None:intergenic 45.0%
GCAAGGTTTGTAGAGTTCTC+AGG - chr8_2:34841118-34841137 Msa1245190:intron 45.0%
!! TTGTGTGGCTTGTTGCTTCT+AGG - chr8_2:34841223-34841242 Msa1245190:CDS 45.0%
! TTTGGCTCCCATGTTCTTGA+AGG + chr8_2:34841260-34841279 None:intergenic 45.0%
GACTCAGCTGTGTCTCTATA+AGG - chr8_2:34841512-34841531 Msa1245190:intron 45.0%
TTAGTGGAAATCGGAGGATG+AGG + chr8_2:34841795-34841814 None:intergenic 45.0%
AAGAAAACAAGCCACCTGTC+CGG - chr8_2:34842337-34842356 Msa1245190:intron 45.0%
AAATATATCGACCGGACAGG+TGG + chr8_2:34842351-34842370 None:intergenic 45.0%
CATTAACAAAAGGAGGGAGG+AGG + chr8_2:34842774-34842793 None:intergenic 45.0%
GTCGCATCAGTTCAATCCAT+AGG + chr8_2:34843308-34843327 None:intergenic 45.0%
!! GGAATGTCGATTTCTGAAGC+TGG - chr8_2:34843469-34843488 Msa1245190:CDS 45.0%
CATGTTTGCTCAGATGCTTG+AGG - chr8_2:34843499-34843518 Msa1245190:CDS 45.0%
!! AAAAAAAAAATAAACAAATT+TGG - chr8_2:34839743-34839762 Msa1245190:intron 5.0%
ACAACGCCGATGTCATCGAT+AGG - chr8_2:34838920-34838939 Msa1245190:three_prime_UTR 50.0%
ATGTGGCATAGGAGTGAGTC+TGG + chr8_2:34838958-34838977 None:intergenic 50.0%
!! TGACGGAGGTTTTGGTAGGA+AGG + chr8_2:34838990-34839009 None:intergenic 50.0%
!! GTCATGACGGAGGTTTTGGT+AGG + chr8_2:34838994-34839013 None:intergenic 50.0%
!! GGTTGTCATGACGGAGGTTT+TGG + chr8_2:34838998-34839017 None:intergenic 50.0%
CAACCAGTCTCATTTCTCGC+CGG - chr8_2:34839013-34839032 Msa1245190:three_prime_UTR 50.0%
CGTTTAGATGCTCCCAAAGG+TGG + chr8_2:34839044-34839063 None:intergenic 50.0%
GAATGTGGCGAGATTTACGG+AGG + chr8_2:34839155-34839174 None:intergenic 50.0%
CCGGAGAATGTGTCTACATG+TGG - chr8_2:34839220-34839239 Msa1245190:intron 50.0%
ATCTTGAAGGTGGGGTCCAA+TGG + chr8_2:34839256-34839275 None:intergenic 50.0%
GTGCAATTCAAGAGGGAAGG+AGG + chr8_2:34839327-34839346 None:intergenic 50.0%
!! GTTGGACTGGTGGTTGGTTT+GGG - chr8_2:34839592-34839611 Msa1245190:intron 50.0%
!! TGGTGGTTGGTTTGGGATGT+TGG - chr8_2:34839599-34839618 Msa1245190:intron 50.0%
CCACCGAAATTGGCAGTAGA+GGG + chr8_2:34839649-34839668 None:intergenic 50.0%
CCTCTACTGCCAATTTCGGT+GGG - chr8_2:34839647-34839666 Msa1245190:intron 50.0%
ATGGACTTGCCCACCGAAAT+TGG + chr8_2:34839659-34839678 None:intergenic 50.0%
AAATGGGGCACACAAGTGTG+CGG - chr8_2:34839700-34839719 Msa1245190:intron 50.0%
GGGGATTAAGGGTTAGGGTT+TGG - chr8_2:34839900-34839919 Msa1245190:intron 50.0%
! GTTGGTCTGCAGATTAGGTG+TGG - chr8_2:34840042-34840061 Msa1245190:intron 50.0%
TGCAGATTAGGTGTGGTCCT+TGG - chr8_2:34840049-34840068 Msa1245190:intron 50.0%
ATTAGGTGTGGTCCTTGGTC+CGG - chr8_2:34840054-34840073 Msa1245190:intron 50.0%
TTCAACCTCTTGGCAGAAGG+TGG + chr8_2:34840620-34840639 None:intergenic 50.0%
GTCGCCAATGATGCCAAATG+TGG + chr8_2:34840729-34840748 None:intergenic 50.0%
CTCGGAGGTAGTTGAGCATA+GGG + chr8_2:34840814-34840833 None:intergenic 50.0%
TCTCGGAGGTAGTTGAGCAT+AGG + chr8_2:34840815-34840834 None:intergenic 50.0%
CTCAACTACCTCCGAGATCT+AGG - chr8_2:34840818-34840837 Msa1245190:intron 50.0%
AACTACCTCCGAGATCTAGG+TGG - chr8_2:34840821-34840840 Msa1245190:intron 50.0%
AATCACCACCTAGATCTCGG+AGG + chr8_2:34840829-34840848 None:intergenic 50.0%
! TCGGAGGATGAGGAGAGTAT+GGG + chr8_2:34841785-34841804 None:intergenic 50.0%
ATCGGAGGATGAGGAGAGTA+TGG + chr8_2:34841786-34841805 None:intergenic 50.0%
ACAAAAGGAGGGAGGAGGAA+GGG + chr8_2:34842769-34842788 None:intergenic 50.0%
AACAAAAGGAGGGAGGAGGA+AGG + chr8_2:34842770-34842789 None:intergenic 50.0%
AATGTTCGGCAGTGCACGTT+TGG - chr8_2:34843448-34843467 Msa1245190:CDS 50.0%
! AGGACATGGCTAACTGGCTT+TGG - chr8_2:34843599-34843618 Msa1245190:CDS 50.0%
!! ACATGGCTAACTGGCTTTGG+AGG - chr8_2:34843602-34843621 Msa1245190:CDS 50.0%
TTCTTCCGCCATCGCCGTTT+GGG + chr8_2:34838890-34838909 None:intergenic 55.0%
! GAGACTGGTTGTCATGACGG+AGG + chr8_2:34839004-34839023 None:intergenic 55.0%
ACGAGTCCAACTGCAACTGC+AGG - chr8_2:34839079-34839098 Msa1245190:three_prime_UTR 55.0%
GGGATTCCTGCAGTTGCAGT+TGG + chr8_2:34839088-34839107 None:intergenic 55.0%
! GTAAACATCGGAGGTGCAGC+AGG + chr8_2:34839193-34839212 None:intergenic 55.0%
GCACCAATCTCGTTTCCCTC+AGG - chr8_2:34839343-34839362 Msa1245190:intron 55.0%
! ACACCCATTTGGGGTTGGAC+TGG - chr8_2:34839579-34839598 Msa1245190:intron 55.0%
CCACCAGTCCAACCCCAAAT+GGG + chr8_2:34839585-34839604 None:intergenic 55.0%
ACCACCAGTCCAACCCCAAA+TGG + chr8_2:34839586-34839605 None:intergenic 55.0%
!! TTTGGGGTTGGACTGGTGGT+TGG - chr8_2:34839586-34839605 Msa1245190:intron 55.0%
!! GGTTGGACTGGTGGTTGGTT+TGG - chr8_2:34839591-34839610 Msa1245190:intron 55.0%
CCCTCTACTGCCAATTTCGG+TGG - chr8_2:34839646-34839665 Msa1245190:intron 55.0%
CCCACCGAAATTGGCAGTAG+AGG + chr8_2:34839650-34839669 None:intergenic 55.0%
ACACAAGTGTGCGGTGGGAT+TGG - chr8_2:34839709-34839728 Msa1245190:intron 55.0%
AGAAGGTGGAACGGGAACTC+TGG + chr8_2:34840606-34840625 None:intergenic 55.0%
CTCTTGGCAGAAGGTGGAAC+GGG + chr8_2:34840614-34840633 None:intergenic 55.0%
CCTCTTGGCAGAAGGTGGAA+CGG + chr8_2:34840615-34840634 None:intergenic 55.0%
! GGGCTTGGTATAGAGTACGG+TGG - chr8_2:34840689-34840708 Msa1245190:intron 55.0%
CATTGGCGACTTGCAGAGCA+TGG - chr8_2:34840739-34840758 Msa1245190:intron 55.0%
TGGAGTGACCCAAACGGCGA+TGG - chr8_2:34838879-34838898 Msa1245190:three_prime_UTR 60.0%
AGTGACCCAAACGGCGATGG+CGG - chr8_2:34838882-34838901 Msa1245190:three_prime_UTR 60.0%
CTTCTTCCGCCATCGCCGTT+TGG + chr8_2:34838891-34838910 None:intergenic 60.0%
CCACCGGCGAGAAATGAGAC+TGG + chr8_2:34839019-34839038 None:intergenic 60.0%
CCAGTCTCATTTCTCGCCGG+TGG - chr8_2:34839016-34839035 Msa1245190:three_prime_UTR 60.0%
ATGTGGGTCCGTGCTGCCAT+TGG - chr8_2:34839237-34839256 Msa1245190:intron 60.0%
! CCCATTTGGGGTTGGACTGG+TGG - chr8_2:34839582-34839601 Msa1245190:intron 60.0%
CCGTTCCACCTTCTGCCAAG+AGG - chr8_2:34840612-34840631 Msa1245190:intron 60.0%
TGGCGACTTGCAGAGCATGG+AGG - chr8_2:34840742-34840761 Msa1245190:intron 60.0%
TGGCATGTGACAGAGCCCCT+TGG + chr8_2:34841482-34841501 None:intergenic 60.0%
GGTGGGGTCCAATGGCAGCA+CGG + chr8_2:34839248-34839267 None:intergenic 65.0%
TGGGGCACACAAGTGTGCGG+TGG - chr8_2:34839703-34839722 Msa1245190:intron 65.0%
GGGGCACACAAGTGTGCGGT+GGG - chr8_2:34839704-34839723 Msa1245190:intron 65.0%
AGGAGGGAGGAGGAAGGGAG+CGG + chr8_2:34842764-34842783 None:intergenic 65.0%
TCGCCGGTGGCGCCACCTTT+GGG - chr8_2:34839029-34839048 Msa1245190:three_prime_UTR 70.0%
GCTCCCAAAGGTGGCGCCAC+CGG + chr8_2:34839035-34839054 None:intergenic 70.0%
CTCGCCGGTGGCGCCACCTT+TGG - chr8_2:34839028-34839047 Msa1245190:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 34838862 34843836 34838862 ID=Msa1245190;Name=Msa1245190
chr8_2 mRNA 34838862 34843836 34838862 ID=Msa1245190-mRNA-1;Parent=Msa1245190;Name=Msa1245190-mRNA-1;_AED=0.06;_eAED=0.06;_QI=36|1|1|1|0.75|0.6|5|378|462
chr8_2 exon 34838862 34839238 34838862 ID=Msa1245190-mRNA-1:exon:11078;Parent=Msa1245190-mRNA-1
chr8_2 exon 34841165 34841453 34841165 ID=Msa1245190-mRNA-1:exon:11077;Parent=Msa1245190-mRNA-1
chr8_2 exon 34841576 34841725 34841576 ID=Msa1245190-mRNA-1:exon:11076;Parent=Msa1245190-mRNA-1
chr8_2 exon 34841818 34842301 34841818 ID=Msa1245190-mRNA-1:exon:11075;Parent=Msa1245190-mRNA-1
chr8_2 exon 34843334 34843836 34843334 ID=Msa1245190-mRNA-1:exon:11074;Parent=Msa1245190-mRNA-1
chr8_2 five_prime_UTR 34843801 34843836 34843801 ID=Msa1245190-mRNA-1:five_prime_utr;Parent=Msa1245190-mRNA-1
chr8_2 CDS 34843334 34843800 34843334 ID=Msa1245190-mRNA-1:cds;Parent=Msa1245190-mRNA-1
chr8_2 CDS 34841818 34842301 34841818 ID=Msa1245190-mRNA-1:cds;Parent=Msa1245190-mRNA-1
chr8_2 CDS 34841576 34841725 34841576 ID=Msa1245190-mRNA-1:cds;Parent=Msa1245190-mRNA-1
chr8_2 CDS 34841166 34841453 34841166 ID=Msa1245190-mRNA-1:cds;Parent=Msa1245190-mRNA-1
chr8_2 three_prime_UTR 34841165 34841165 34841165 ID=Msa1245190-mRNA-1:three_prime_utr;Parent=Msa1245190-mRNA-1
chr8_2 three_prime_UTR 34838862 34839238 34838862 ID=Msa1245190-mRNA-1:three_prime_utr;Parent=Msa1245190-mRNA-1
Gene Sequence

>Msa1245190

ATGGCGGAAGAAGAAGAAGAAAACAACGCCGATGTCATCGATAGGATGAGTAGTTTACCAGACTCACTCCTATGCCACATCCTATCATTCCTTCCTACCAAAACCTCCGTCATGACAACCAGTCTCATTTCTCGCCGGTGGCGCCACCTTTGGGAGCATCTAAACGTCTTCGTCTTCAACGACGAGTCCAACTGCAACTGCAGGAATCCCAAAAAGTTCAGAAAGTTTGCATTTTTCGTGAGCTCTGTGTTATCCCTCCGTAAATCTCGCCACATTCGAAAATTTCATCTCACCTGCTGCACCTCCGATGTTTACAGTTTTCCCGGAGAATGTGTCTACATGTGGGTCCGTGCTGCCATTGGACCCCACCTTCAAGATTTGTCTCTCAATATTACAAACTGCCATGGTGATGATATGGTTTATCTCCCTCCTTCCCTCTTGAATTGCACCAATCTCGTTTCCCTCAGTCTTTTTGGTTTGATCCATTTAAAATTTCAACATTCTGCGATTCATTTTCCATCATTAAAGATGTTGAAAGTCGAATTCAGCATATTGGAACACAACATTGACATTGAGGATTTCGGCAAACACCTTACGGATTCGATACTTGTCTTTCTCTCTGGCTGCCCCATACTCGAAACTCTAGATACCTACTTTTCTCCCTATTTCTTGACCAGAGTTCCCGTTCCACCTTCTGCCAAGAGGTTGAAATTAACTGATGTGAAATTCTCATGGACATGCCTTGAAATAGATTCTGATGGGCTTGGTATAGAGTACGGTGGTTGCAACATCAAACCCACATTTGGCATCATTGGCGACTTGCAGAGCATGGAGGAAGCATATCTTGATTTTTTTTCCTTGCGTGAAAGTGAATTTATCGACCCTATGCTCAACTACCTCCGAGATCTAGGTGGTGATTTACATCTACTTCTGCGTCATTCGACATCAAAGAAGCCGCTTCGCACCTCCATTCTAAATTATCCAGAATTTTGCAATTTGCATCATCTAAAGTTCATTATTCCCTGCTTCAACACGAATCTTCTGCTCAACGTGCTTGAGAAATGTCATATGCTTAAAGTTCTCATAATTCAGAGTAGCAAGGATGAACTGTCACCTTCAAGAACATGGGAGCCAAAGTCAACAACAGTTCCTAAATGTCTTGAATCCCACCTGACTTTTATTCATATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGCTGAATATATTTTGCGTAACGGAATTGTTTTACACACAATGCTCATTTTTTTCGATACTTCAATGGACCTAACAAACAAGAACTGTTCTATCAAAAGATTAACTGATATACCAAGGGGCTCTGTCACATGCCAACTTAAATTTGACTCAGCTGTGTCTCTATAA
Protein sequence

>Msa1245190

MAEEEEENNADVIDRMSSLPDSLLCHILSFLPTKTSVMTTSLISRRWRHLWEHLNVFVFNDESNCNCRNPKKFRKFAFFVSSVLSLRKSRHIRKFHLTCCTSDVYSFPGECVYMWVRAAIGPHLQDLSLNITNCHGDDMVYLPPSLLNCTNLVSLSLFGLIHLKFQHSAIHFPSLKMLKVEFSILEHNIDIEDFGKHLTDSILVFLSGCPILETLDTYFSPYFLTRVPVPPSAKRLKLTDVKFSWTCLEIDSDGLGIEYGGCNIKPTFGIIGDLQSMEEAYLDFFSLRESEFIDPMLNYLRDLGGDLHLLLRHSTSKKPLRTSILNYPEFCNLHHLKFIIPCFNTNLLLNVLEKCHMLKVLIIQSSKDELSPSRTWEPKSTTVPKCLESHLTFIHIEGYQGFEDELAFAEYILRNGIVLHTMLIFFDTSMDLTNKNCSIKRLTDIPRGSVTCQLKFDSAVSL*