AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1285380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285380 MtrunA17_Chr8g0360071 97.162 458 13 0 4 461 3 460 0.0 912
Msa1285380 MtrunA17_Chr4g0025351 69.296 469 134 4 3 461 10 478 0.0 639
Msa1285380 MtrunA17_Chr8g0362591 67.111 450 145 2 14 461 7 455 0.0 595
Msa1285380 MtrunA17_Chr8g0369261 57.537 471 157 12 1 461 1 438 1.90e-165 473
Msa1285380 MtrunA17_Chr8g0363981 53.468 447 166 9 13 458 24 429 1.63e-148 430
Msa1285380 MtrunA17_Chr8g0363821 53.377 459 171 11 14 461 23 449 1.23e-147 428
Msa1285380 MtrunA17_Chr8g0363971 48.708 503 181 13 2 461 13 481 8.43e-136 399
Msa1285380 MtrunA17_Chr8g0362491 42.737 475 231 15 2 457 11 463 1.22e-101 311
Msa1285380 MtrunA17_Chr2g0319941 44.397 464 230 10 3 457 13 457 1.23e-101 311
Msa1285380 MtrunA17_Chr8g0363791 58.484 277 94 4 193 462 5 267 1.02e-99 299
Msa1285380 MtrunA17_Chr8g0360061 41.031 485 235 15 6 457 11 477 1.51e-94 293
Msa1285380 MtrunA17_Chr8g0362021 42.227 476 235 12 1 461 7 457 1.55e-91 285
Msa1285380 MtrunA17_Chr5g0444311 38.347 472 260 9 1 456 5 461 1.64e-85 270
Msa1285380 MtrunA17_Chr8g0362521 39.957 463 255 8 1 455 2 449 5.81e-83 263
Msa1285380 MtrunA17_Chr8g0362001 50.498 301 111 10 13 302 83 356 3.47e-81 255
Msa1285380 MtrunA17_Chr8g0362461 39.451 474 208 18 5 456 2 418 1.88e-79 253
Msa1285380 MtrunA17_Chr8g0358771 43.251 363 180 11 101 457 9 351 9.32e-70 225
Msa1285380 MtrunA17_Chr2g0321161 69.930 143 43 0 319 461 17 159 4.73e-62 199
Msa1285380 MtrunA17_Chr8g0363951 44.318 264 133 4 201 456 8 265 4.40e-57 189
Msa1285380 MtrunA17_Chr8g0363801 58.108 148 48 5 14 155 9 148 1.34e-47 160
Msa1285380 MtrunA17_Chr4g0014361 34.557 327 171 8 155 456 3 311 4.63e-45 159
Msa1285380 MtrunA17_Chr4g0011341 37.097 310 157 10 161 457 23 307 1.45e-44 158
Msa1285380 MtrunA17_Chr8g0340591 39.300 257 148 6 204 457 17 268 6.98e-44 155
Msa1285380 MtrunA17_Chr4g0014371 50.000 158 70 3 5 155 3 158 2.10e-41 145
Msa1285380 MtrunA17_Chr8g0373051 40.816 245 127 6 7 246 3 234 2.44e-36 137
Msa1285380 MtrunA17_Chr8g0373051 48.120 133 66 3 325 457 249 378 1.13e-29 119
Msa1285380 MtrunA17_Chr1g0166251 29.870 462 222 17 13 457 10 386 5.17e-35 134
Msa1285380 MtrunA17_Chr5g0405101 48.101 158 66 6 5 155 14 162 6.25e-32 120
Msa1285380 MtrunA17_Chr7g0236211 29.011 455 241 16 11 457 9 389 2.33e-31 124
Msa1285380 MtrunA17_Chr8g0363941 47.020 151 71 4 11 155 13 160 7.37e-31 117
Msa1285380 MtrunA17_Chr5g0438191 29.241 448 266 16 13 449 12 419 2.39e-30 122
Msa1285380 MtrunA17_Chr4g0011381 38.655 238 132 10 204 435 4 233 9.08e-30 116
Msa1285380 MtrunA17_Chr8g0340611 44.737 152 74 4 14 156 10 160 5.58e-29 111
Msa1285380 MtrunA17_Chr7g0224001 27.754 472 251 17 1 458 1 396 1.59e-28 116
Msa1285380 MtrunA17_Chr5g0435741 28.352 455 268 17 13 449 32 446 3.05e-28 116
Msa1285380 MtrunA17_Chr2g0321151 45.033 151 67 4 41 185 2 142 4.44e-28 109
Msa1285380 MtrunA17_Chr5g0405111 34.201 269 117 8 193 457 5 217 5.28e-28 110
Msa1285380 MtrunA17_Chr5g0396411 26.840 462 253 18 16 457 1 397 2.03e-27 113
Msa1285380 MtrunA17_Chr3g0114151 28.009 457 255 17 8 456 18 408 7.41e-27 112
Msa1285380 MtrunA17_Chr7g0262081 28.009 457 233 15 13 457 29 401 8.78e-27 111
Msa1285380 MtrunA17_Chr7g0227641 29.039 458 208 20 13 456 10 364 4.57e-26 108
Msa1285380 MtrunA17_Chr8g0340581 46.939 147 70 6 14 155 16 159 5.52e-24 98.6
Msa1285380 MtrunA17_Chr1g0181601 25.721 451 257 18 13 456 7 386 2.42e-23 101
Msa1285380 MtrunA17_Chr5g0396401 25.439 456 248 17 11 457 5 377 4.17e-23 100
Msa1285380 MtrunA17_Chr8g0340521 41.615 161 79 6 1 155 35 186 3.09e-22 94.0
Msa1285380 MtrunA17_Chr5g0431711 36.652 221 112 13 1 217 1 197 5.10e-22 97.4
Msa1285380 MtrunA17_Chr7g0227851 37.559 213 100 11 13 216 10 198 5.76e-22 97.4
Msa1285380 MtrunA17_Chr1g0193401 26.477 457 256 16 8 457 175 558 6.79e-22 98.6
Msa1285380 MtrunA17_Chr8g0340541 53.571 84 35 2 374 457 25 104 9.25e-22 89.7
Msa1285380 MtrunA17_Chr1g0208801 27.455 448 256 16 9 454 3 383 1.60e-21 96.3
Msa1285380 MtrunA17_Chr7g0246351 25.641 468 239 20 14 454 6 391 1.65e-21 96.3
Msa1285380 MtrunA17_Chr7g0274231 35.000 220 118 9 6 219 4 204 2.50e-21 93.6
Msa1285380 MtrunA17_Chr6g0466481 24.779 452 254 18 13 457 7 379 4.16e-21 94.7
Msa1285380 MtrunA17_Chr6g0465671 24.779 452 254 18 13 457 7 379 4.20e-21 94.7
Msa1285380 MtrunA17_Chr4g0011351 40.571 175 76 8 2 155 9 176 1.25e-20 90.1
Msa1285380 MtrunA17_Chr7g0226481 35.185 216 113 10 5 217 2 193 2.17e-20 92.4
Msa1285380 MtrunA17_Chr7g0226481 32.692 156 96 4 310 457 196 350 1.76e-11 65.5
Msa1285380 MtrunA17_Chr5g0395311 25.991 454 261 14 16 462 28 413 3.88e-20 92.8
Msa1285380 MtrunA17_Chr5g0419701 28.741 421 218 17 15 424 5 354 1.21e-19 90.5
Msa1285380 MtrunA17_Chr5g0425131 33.333 228 118 10 1 222 1 200 1.40e-19 88.2
Msa1285380 MtrunA17_Chr5g0423901 31.193 218 125 7 7 222 2 196 6.66e-19 88.2
Msa1285380 MtrunA17_Chr3g0138571 32.710 214 112 9 14 222 13 199 7.51e-19 88.2
Msa1285380 MtrunA17_Chr2g0326831 24.565 460 287 18 6 426 61 499 1.02e-18 89.0
Msa1285380 MtrunA17_Chr3g0138371 24.945 453 246 14 14 456 20 388 1.09e-18 87.8
Msa1285380 MtrunA17_Chr2g0297931 26.226 469 258 19 5 456 2 399 1.12e-18 87.8
Msa1285380 MtrunA17_Chr7g0262121 25.800 469 230 21 13 457 19 393 1.88e-18 87.0
Msa1285380 MtrunA17_Chr5g0419561 25.721 416 220 16 12 424 10 339 3.33e-18 86.3
Msa1285380 MtrunA17_Chr4g0041631 26.834 477 295 19 11 459 16 466 3.03e-17 84.0
Msa1285380 MtrunA17_Chr4g0027441 28.281 442 257 19 14 429 9 416 3.75e-17 83.6
Msa1285380 MtrunA17_Chr7g0227821 36.058 208 108 9 13 217 10 195 4.29e-17 80.5
Msa1285380 MtrunA17_Chr3g0137701 34.247 219 106 10 14 217 9 204 7.61e-17 82.4
Msa1285380 MtrunA17_Chr3g0137681 31.336 217 116 9 11 219 7 198 9.14e-17 82.0
Msa1285380 MtrunA17_Chr3g0137721 32.569 218 113 9 7 218 6 195 1.03e-16 82.0
Msa1285380 MtrunA17_Chr2g0278121 32.877 219 114 9 13 215 15 216 1.10e-16 82.0
Msa1285380 MtrunA17_Chr8g0358761 57.576 66 26 2 1 66 1 64 1.36e-16 74.3
Msa1285380 MtrunA17_Chr7g0236151 31.527 203 89 8 14 215 9 162 2.04e-16 80.1
Msa1285380 MtrunA17_Chr7g0236191 31.527 203 89 8 14 215 9 162 2.04e-16 80.1
Msa1285380 MtrunA17_Chr7g0236101 34.146 164 93 5 14 176 9 158 2.18e-16 76.6
Msa1285380 MtrunA17_Chr2g0278801 32.018 228 118 7 13 234 1 197 2.37e-16 78.6
Msa1285380 MtrunA17_Chr4g0027411 25.263 475 263 16 14 425 9 454 2.77e-16 81.3
Msa1285380 MtrunA17_Chr7g0262091 31.429 210 112 9 13 217 17 199 3.15e-16 80.5
Msa1285380 MtrunA17_Chr7g0262091 35.461 141 85 3 322 457 252 391 3.07e-11 65.1
Msa1285380 MtrunA17_Chr3g0091171 33.333 210 109 10 14 217 5 189 4.53e-16 79.7
Msa1285380 MtrunA17_Chr3g0086041 32.394 213 116 11 5 215 20 206 5.97e-16 79.3
Msa1285380 MtrunA17_Chr7g0227631 27.513 378 182 16 92 456 10 308 8.10e-16 78.2
Msa1285380 MtrunA17_Chr7g0227771 30.660 212 108 9 14 215 4 186 1.29e-15 75.5
Msa1285380 MtrunA17_Chr3g0086141 34.123 211 106 8 14 215 3 189 2.00e-15 75.5
Msa1285380 MtrunA17_Chr4g0041581 26.340 429 276 17 10 425 19 420 4.09e-15 77.4
Msa1285380 MtrunA17_Chr3g0093361 30.660 212 112 8 14 217 43 227 7.16e-15 76.3
Msa1285380 MtrunA17_Chr1g0164901 31.527 203 124 6 14 215 9 197 8.70e-15 75.9
Msa1285380 MtrunA17_Chr4g0027431 26.667 450 254 19 14 429 9 416 1.06e-14 75.9
Msa1285380 MtrunA17_Chr6g0458601 32.407 216 120 9 2 215 54 245 1.31e-14 75.9
Msa1285380 MtrunA17_Chr5g0419431 31.390 223 125 10 1 219 1 199 1.32e-14 75.5
Msa1285380 MtrunA17_Chr7g0236221 37.815 119 64 4 14 131 9 118 1.59e-14 70.5
Msa1285380 MtrunA17_Chr3g0136291 28.155 206 126 5 12 217 12 195 1.90e-14 74.3
Msa1285380 MtrunA17_Chr8g0340571 42.857 84 46 2 367 450 17 98 2.19e-14 68.9
Msa1285380 MtrunA17_Chr8g0362011 67.391 46 15 0 357 402 1 46 2.51e-14 67.4
Msa1285380 MtrunA17_Chr3g0107721 30.594 219 122 7 14 220 3 203 3.45e-14 74.3
Msa1285380 MtrunA17_Chr7g0252201 36.943 157 79 7 4 157 7 146 4.48e-14 72.8
Msa1285380 MtrunA17_Chr6g0471031 31.455 213 123 9 10 219 57 249 5.02e-14 73.9
Msa1285380 MtrunA17_Chr7g0227651 32.420 219 116 9 12 223 9 202 7.64e-14 72.8
Msa1285380 MtrunA17_Chr2g0278131 42.500 80 45 1 1 80 1 79 8.39e-14 66.6
Msa1285380 MtrunA17_Chr7g0235361 29.630 216 126 9 13 226 39 230 8.76e-14 72.4
Msa1285380 MtrunA17_Chr2g0277281 31.193 218 127 6 6 215 3 205 1.05e-13 72.8
Msa1285380 MtrunA17_Chr4g0049751 30.690 290 148 14 14 294 18 263 1.14e-13 72.8
Msa1285380 MtrunA17_Chr4g0027461 30.645 248 114 10 1 215 1 223 1.40e-13 71.6
Msa1285380 MtrunA17_Chr2g0278791 30.942 223 123 7 13 234 1 193 1.92e-13 71.6
Msa1285380 MtrunA17_Chr8g0356821 38.667 150 78 7 204 346 3 145 2.74e-13 67.4
Msa1285380 MtrunA17_Chr7g0273871 28.986 207 124 8 12 217 11 195 2.78e-13 71.2
Msa1285380 MtrunA17_Chr3g0120901 40.496 121 61 5 14 134 17 126 2.88e-13 70.5
Msa1285380 MtrunA17_Chr5g0438051 29.858 211 125 6 14 213 6 204 3.69e-13 70.9
Msa1285380 MtrunA17_Chr8g0378391 48.611 72 30 2 13 84 10 74 5.50e-13 64.3
Msa1285380 MtrunA17_Chr3g0139601 35.714 210 96 12 14 216 13 190 5.79e-13 70.9
Msa1285380 MtrunA17_Chr7g0227621 43.902 82 39 2 13 94 10 84 8.23e-13 64.7
Msa1285380 MtrunA17_Chr2g0278101 29.864 221 129 7 5 215 3 207 8.60e-13 69.3
Msa1285380 MtrunA17_Chr7g0226471 33.577 137 83 3 328 457 12 147 1.49e-12 65.1
Msa1285380 MtrunA17_Chr6g0465731 32.057 209 109 10 16 218 10 191 1.94e-12 68.6
Msa1285380 MtrunA17_Chr5g0440681 33.645 214 117 11 4 215 20 210 1.99e-12 68.6
Msa1285380 MtrunA17_Chr7g0215531 29.444 180 93 5 3 181 2 148 2.30e-12 65.1
Msa1285380 MtrunA17_Chr4g0023251 30.942 223 113 10 13 219 1 198 2.65e-12 67.4
Msa1285380 MtrunA17_Chr6g0457681 29.843 191 117 7 2 182 43 226 2.81e-12 68.2
Msa1285380 MtrunA17_Chr7g0236171 43.678 87 41 3 14 99 9 88 3.43e-12 64.7
Msa1285380 MtrunA17_Chr7g0236131 43.678 87 41 3 14 99 9 88 3.43e-12 64.7
Msa1285380 MtrunA17_Chr7g0236081 43.678 87 41 3 14 99 9 88 3.43e-12 64.7
Msa1285380 MtrunA17_Chr0c09g0493551 31.579 209 110 10 16 218 10 191 3.73e-12 67.0
Msa1285380 MtrunA17_Chr7g0255101 29.358 218 128 8 1 217 97 289 6.52e-12 67.4
Msa1285380 MtrunA17_Chr7g0231671 25.983 458 250 19 10 425 15 425 1.34e-11 66.6
Msa1285380 MtrunA17_Chr5g0423851 30.556 216 124 9 9 222 3 194 1.55e-11 65.9
Msa1285380 MtrunA17_Chr7g0236141 42.857 77 44 0 381 457 147 223 1.73e-11 63.9
Msa1285380 MtrunA17_Chr7g0236091 42.857 77 44 0 381 457 147 223 1.73e-11 63.9
Msa1285380 MtrunA17_Chr7g0236181 42.857 77 44 0 381 457 147 223 1.73e-11 63.9
Msa1285380 MtrunA17_Chr7g0227831 33.945 109 68 3 348 456 16 120 1.90e-11 61.2
Msa1285380 MtrunA17_Chr3g0132631 29.864 221 101 11 7 216 5 182 2.10e-11 65.5
Msa1285380 MtrunA17_Chr3g0096461 30.374 214 129 7 5 216 14 209 2.42e-11 65.9
Msa1285380 MtrunA17_Chr3g0129711 43.158 95 46 5 12 102 2 92 3.36e-11 60.1
Msa1285380 MtrunA17_Chr7g0221741 25.301 332 199 14 1 315 1 300 3.54e-11 64.7
Msa1285380 MtrunA17_Chr7g0250271 63.830 47 14 2 14 60 18 61 5.93e-11 59.7
Msa1285380 MtrunA17_Chr0c29g0494011 63.830 47 14 2 14 60 18 61 5.93e-11 59.7
Msa1285380 MtrunA17_Chr6g0486921 30.526 190 98 8 1 177 6 174 6.63e-11 63.9
Msa1285380 MtrunA17_Chr6g0466471 54.902 51 22 1 13 63 7 56 8.42e-11 58.5
Msa1285380 MtrunA17_Chr8g0366411 33.544 158 85 6 3 157 69 209 9.78e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1285380 AT5G56420.1 29.374 463 262 16 14 457 6 422 3.83e-30 122
Msa1285380 AT5G56420.2 29.374 463 262 16 14 457 6 422 3.83e-30 122
Msa1285380 AT5G56420.3 29.374 463 262 16 14 457 6 422 3.83e-30 122
Msa1285380 AT5G53840.1 26.338 467 279 17 14 458 18 441 2.82e-24 105
Msa1285380 AT4G26340.1 26.974 456 285 16 13 457 1 419 1.29e-23 103
Msa1285380 AT4G10400.2 27.111 450 280 16 13 456 1 408 5.02e-23 101
Msa1285380 AT4G10400.3 27.111 450 280 16 13 456 1 408 5.02e-23 101
Msa1285380 AT4G10400.1 27.111 450 280 16 13 456 1 408 5.02e-23 101
Msa1285380 AT1G69630.1 25.200 500 276 16 1 454 1 448 1.52e-22 100
Msa1285380 AT4G13985.1 25.000 496 287 19 3 454 2 456 7.10e-22 98.2
Msa1285380 AT2G26030.4 26.316 475 281 19 14 454 4 443 7.72e-22 98.2
Msa1285380 AT1G16930.2 26.708 483 284 20 4 457 8 449 1.22e-21 97.4
Msa1285380 AT1G16930.1 26.708 483 284 20 4 457 8 449 1.22e-21 97.4
Msa1285380 AT1G16930.3 26.708 483 284 20 4 457 8 449 1.22e-21 97.4
Msa1285380 AT1G32375.2 27.105 487 248 22 13 457 1 422 3.02e-21 96.3
Msa1285380 AT1G32375.1 27.105 487 248 22 13 457 1 422 3.02e-21 96.3
Msa1285380 AT2G26030.3 26.415 477 273 20 14 454 4 438 5.53e-21 95.5
Msa1285380 AT2G26030.1 26.415 477 273 20 14 454 4 438 5.53e-21 95.5
Msa1285380 AT1G78750.2 26.882 465 291 19 13 454 17 455 7.66e-21 95.1
Msa1285380 AT1G78750.1 26.882 465 291 19 13 454 17 455 7.66e-21 95.1
Msa1285380 AT5G56560.2 28.289 456 271 20 15 457 6 418 8.76e-21 94.7
Msa1285380 AT5G44950.1 28.726 463 266 23 14 448 4 430 1.81e-20 94.0
Msa1285380 AT2G26860.1 28.770 431 237 15 13 416 1 388 6.14e-20 92.0
Msa1285380 AT2G26860.2 28.770 431 237 15 13 416 1 388 6.14e-20 92.0
Msa1285380 AT4G00160.1 28.870 478 261 20 14 459 16 446 1.07e-19 91.7
Msa1285380 AT3G42770.1 28.416 461 259 20 16 449 1 417 2.02e-19 91.3
Msa1285380 AT5G60610.2 25.581 430 252 14 13 421 1 383 2.48e-19 90.1
Msa1285380 AT5G60610.1 25.581 430 252 14 13 421 1 383 2.48e-19 90.1
Msa1285380 AT5G53635.1 26.237 465 278 16 16 456 2 425 3.36e-19 90.1
Msa1285380 AT3G60040.4 27.561 410 253 14 14 406 13 395 5.38e-19 90.1
Msa1285380 AT5G56400.1 25.536 466 284 17 13 457 32 455 5.46e-19 89.7
Msa1285380 AT3G60040.1 27.561 410 253 14 14 406 232 614 6.76e-19 90.5
Msa1285380 AT3G60040.3 27.561 410 253 14 14 406 233 615 6.89e-19 90.1
Msa1285380 AT3G60040.2 27.561 410 253 14 14 406 232 614 7.31e-19 90.1
Msa1285380 AT3G60040.5 27.561 410 253 14 14 406 230 612 7.42e-19 90.1
Msa1285380 AT1G06630.7 32.195 205 122 7 14 215 12 202 8.83e-19 87.0
Msa1285380 AT3G26922.1 32.618 233 124 10 14 240 14 219 1.28e-18 86.7
Msa1285380 AT3G26922.2 32.618 233 124 10 14 240 14 219 1.28e-18 86.7
Msa1285380 AT4G26350.1 26.025 488 258 20 13 457 1 428 1.29e-18 88.2
Msa1285380 AT1G06630.2 31.489 235 130 10 14 238 12 225 1.55e-18 87.8
Msa1285380 AT1G06630.6 31.489 235 130 10 14 238 12 225 1.55e-18 87.8
Msa1285380 AT1G06630.4 31.489 235 130 10 14 238 12 225 1.55e-18 87.8
Msa1285380 AT1G06630.3 31.489 235 130 10 14 238 12 225 1.55e-18 87.8
Msa1285380 AT1G06630.9 31.489 235 130 10 14 238 21 234 1.80e-18 87.8
Msa1285380 AT1G06630.5 31.034 232 135 9 14 238 12 225 2.02e-18 87.0
Msa1285380 AT1G06630.8 31.034 232 135 9 14 238 12 225 2.02e-18 87.0
Msa1285380 AT5G22720.1 24.792 480 286 16 14 456 23 464 2.18e-18 87.8
Msa1285380 AT1G06630.1 31.034 232 135 9 14 238 12 225 3.11e-18 87.4
Msa1285380 AT1G66310.1 25.647 464 285 15 11 454 16 439 3.68e-18 87.0
Msa1285380 AT3G59200.2 32.692 208 113 8 14 215 7 193 7.12e-18 85.5
Msa1285380 AT1G13780.1 26.240 484 273 22 14 454 10 452 2.52e-17 84.7
Msa1285380 AT3G59200.1 32.692 208 113 8 14 215 7 193 2.97e-17 84.7
Msa1285380 AT5G22700.6 27.913 412 235 19 14 419 43 398 3.48e-17 84.0
Msa1285380 AT4G09920.2 31.527 203 118 7 13 215 1 182 9.00e-17 80.9
Msa1285380 AT4G09920.4 31.527 203 118 7 13 215 1 182 9.00e-17 80.9
Msa1285380 AT4G09920.3 31.527 203 118 7 13 215 1 182 9.00e-17 80.9
Msa1285380 AT5G22700.2 27.523 436 247 20 14 419 6 402 1.03e-16 82.4
Msa1285380 AT5G22700.3 27.523 436 247 20 14 419 6 402 1.03e-16 82.4
Msa1285380 AT5G22700.1 27.523 436 247 20 14 419 6 402 1.03e-16 82.4
Msa1285380 AT5G22700.4 27.523 436 247 20 14 419 6 402 1.03e-16 82.4
Msa1285380 AT4G09920.1 31.527 203 118 7 13 215 1 182 1.32e-16 80.9
Msa1285380 AT4G09920.5 31.527 203 118 7 13 215 1 182 1.32e-16 80.9
Msa1285380 AT4G13965.1 27.451 459 267 20 14 454 10 420 1.44e-16 82.0
Msa1285380 AT5G22700.5 27.523 436 247 20 14 419 43 439 1.59e-16 82.0
Msa1285380 AT5G56810.1 28.788 462 263 19 14 454 15 431 3.67e-16 80.9
Msa1285380 AT5G22660.2 25.833 480 268 21 14 454 13 443 4.70e-16 80.5
Msa1285380 AT5G50270.1 28.440 436 246 18 13 424 1 394 5.75e-16 80.1
Msa1285380 AT3G52680.1 28.000 475 267 20 14 459 21 449 8.81e-16 79.7
Msa1285380 AT5G56380.2 24.094 469 302 15 13 457 1 439 1.07e-15 79.3
Msa1285380 AT5G56380.1 24.094 469 302 15 13 457 1 439 1.07e-15 79.3
Msa1285380 AT4G14103.2 32.489 237 130 12 14 245 8 219 1.90e-15 78.6
Msa1285380 AT5G18780.2 28.330 473 262 20 14 454 11 438 2.35e-15 78.6
Msa1285380 AT5G18780.1 28.330 473 262 20 14 454 11 438 2.35e-15 78.6
Msa1285380 AT4G14103.3 32.636 239 127 12 14 245 8 219 2.64e-15 77.8
Msa1285380 AT4G14103.1 32.636 239 127 12 14 245 8 219 2.64e-15 77.8
Msa1285380 AT5G41840.1 30.233 215 119 9 14 215 14 210 6.26e-15 77.4
Msa1285380 AT5G56370.1 25.053 471 275 18 13 456 1 420 1.33e-14 75.9
Msa1285380 AT5G56370.2 25.053 471 275 18 13 456 1 420 1.33e-14 75.9
Msa1285380 AT3G58820.1 35.669 157 90 5 13 163 1 152 1.50e-14 75.9
Msa1285380 AT5G56690.1 25.962 416 242 18 16 405 4 379 1.59e-14 75.5
Msa1285380 AT3G59190.2 30.918 207 121 7 14 215 12 201 1.95e-14 75.9
Msa1285380 AT3G59190.1 30.918 207 121 7 14 215 12 201 2.00e-14 75.1
Msa1285380 AT3G58920.1 25.253 495 293 19 13 457 1 468 2.04e-14 75.5
Msa1285380 AT2G04230.1 26.105 475 283 21 14 459 13 448 2.83e-14 75.1
Msa1285380 AT5G44940.1 26.432 454 243 17 14 457 5 377 2.86e-14 74.7
Msa1285380 AT5G22670.1 24.532 481 271 19 14 454 11 439 2.90e-14 75.1
Msa1285380 AT3G03040.1 35.465 172 97 5 13 179 1 163 3.47e-14 75.1
Msa1285380 AT4G14096.2 25.105 474 296 22 14 458 8 451 3.61e-14 74.7
Msa1285380 AT4G14096.1 25.105 474 296 22 14 458 8 451 3.61e-14 74.7
Msa1285380 AT2G29930.3 24.748 497 270 24 14 456 12 458 4.02e-14 74.7
Msa1285380 AT2G29930.1 24.748 497 270 24 14 456 12 458 4.02e-14 74.7
Msa1285380 AT5G56440.1 32.212 208 110 7 13 215 1 182 5.13e-14 74.3
Msa1285380 AT3G59240.1 29.614 233 135 9 14 238 8 219 1.17e-13 73.6
Msa1285380 AT3G59210.2 32.039 206 117 7 14 215 7 193 1.57e-13 72.8
Msa1285380 AT3G59210.1 32.039 206 117 7 14 215 7 193 1.57e-13 72.8
Msa1285380 AT3G59210.5 32.039 206 117 7 14 215 7 193 1.57e-13 72.8
Msa1285380 AT3G59210.4 32.039 206 117 7 14 215 7 193 1.57e-13 72.8
Msa1285380 AT3G59210.3 32.039 206 117 7 14 215 7 193 1.57e-13 72.8
Msa1285380 AT3G59000.1 33.140 172 104 4 13 178 1 167 5.50e-13 71.2
Msa1285380 AT3G44060.1 30.000 200 123 5 16 215 1 183 6.39e-13 70.9
Msa1285380 AT2G42720.1 30.519 308 171 16 13 310 1 275 7.58e-13 70.5
Msa1285380 AT4G00315.1 31.884 207 116 7 13 215 1 186 8.31e-13 70.5
Msa1285380 AT3G59230.1 30.986 213 117 7 14 215 12 205 9.44e-13 70.5
Msa1285380 AT1G66300.1 23.690 477 298 16 3 454 18 453 9.68e-13 70.5
Msa1285380 AT1G05080.1 25.751 466 283 19 14 456 13 438 1.14e-12 70.1
Msa1285380 AT3G03030.2 32.597 181 106 5 13 185 1 173 1.18e-12 69.3
Msa1285380 AT1G55660.1 31.100 209 119 7 11 215 50 237 1.29e-12 70.1
Msa1285380 AT1G55660.2 31.100 209 119 7 11 215 50 237 1.62e-12 69.3
Msa1285380 AT3G58880.1 31.604 212 117 9 12 216 1 191 1.64e-12 69.7
Msa1285380 AT3G03030.1 32.597 181 106 5 13 185 1 173 1.66e-12 69.7
Msa1285380 AT3G59160.1 30.357 224 119 8 14 215 13 221 1.80e-12 69.7
Msa1285380 AT5G56700.2 28.440 327 180 15 115 421 55 347 2.23e-12 68.6
Msa1285380 AT3G58940.1 30.374 214 121 7 13 215 1 197 3.85e-12 68.9
Msa1285380 AT3G58940.2 30.374 214 121 7 13 215 1 197 3.85e-12 68.9
Msa1285380 AT3G26922.3 30.415 217 118 10 30 240 1 190 3.98e-12 67.0
Msa1285380 AT3G26922.5 30.415 217 118 10 30 240 1 190 3.98e-12 67.0
Msa1285380 AT4G15060.2 26.034 411 224 17 13 394 25 384 4.42e-12 68.2
Msa1285380 AT5G38392.1 30.233 215 117 9 13 215 1 194 4.74e-12 65.9
Msa1285380 AT3G49030.2 25.383 457 268 18 14 458 21 416 7.05e-12 67.4
Msa1285380 AT5G18780.3 37.059 170 89 8 14 181 11 164 7.30e-12 67.4
Msa1285380 AT5G18780.4 37.059 170 89 8 14 181 11 164 7.30e-12 67.4
Msa1285380 AT3G51530.1 25.822 426 245 19 14 416 30 407 1.03e-11 67.0
Msa1285380 AT3G26930.2 28.033 478 261 21 14 460 21 446 1.09e-11 67.0
Msa1285380 AT4G00320.1 29.412 221 112 10 14 215 13 208 1.11e-11 67.4
Msa1285380 AT5G41630.1 28.837 215 119 9 14 215 12 205 1.36e-11 66.6
Msa1285380 AT5G38390.1 31.220 205 109 8 13 215 1 175 2.68e-11 65.9
Msa1285380 AT3G14710.1 23.973 438 256 16 14 424 26 413 4.47e-11 65.1
Msa1285380 AT5G56370.3 30.806 211 109 9 13 216 1 181 4.55e-11 64.3
Msa1285380 AT5G41830.2 29.412 221 112 11 14 215 13 208 4.66e-11 65.5
Msa1285380 AT3G44090.1 24.508 457 266 20 16 449 26 426 5.03e-11 65.1
Msa1285380 AT3G59170.1 29.018 224 124 6 14 215 7 217 6.64e-11 64.7
Msa1285380 AT3G59000.2 43.478 92 46 2 13 99 1 91 6.85e-11 63.9

Find 128 sgRNAs with CRISPR-Local

Find 324 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCGCCGGTGGCGCCACCTT+TGG 0.219688 8_3:-29330159 Msa1285380:CDS
TAAAGTTACTGTGTGAAAAT+TGG 0.263937 8_3:-29330328 Msa1285380:five_prime_UTR
GGGAACTCTGGTCAAGAAAT+AGG 0.266225 8_3:+29328561 None:intergenic
TGATGCAAATTGCAAAATTC+TGG 0.267481 8_3:+29328149 None:intergenic
TAGAACAGTTCTTGTTTGTT+AGG 0.285758 8_3:+29327716 None:intergenic
TTCGAATGTGGCGAGATTTA+CGG 0.286490 8_3:+29330032 None:intergenic
AGGTGGGATTCAAGACATTT+AGG 0.296428 8_3:+29327859 None:intergenic
TCGCCGGTGGCGCCACCTTT+GGG 0.306009 8_3:-29330158 Msa1285380:CDS
AACATTGACATTGAGGATTT+CGG 0.318146 8_3:-29328661 Msa1285380:CDS
GGTCGTCATGACGGAGGTTT+TGG 0.329588 8_3:+29330192 None:intergenic
GACTCAGCTGTGTCTCTATA+AGG 0.330026 8_3:-29327640 Msa1285380:intron
GAAAGTCGAATTCAGCATAT+TGG 0.336684 8_3:-29328689 Msa1285380:CDS
TCAATACTTGTCTTTCTCTC+TGG 0.353157 8_3:-29328622 Msa1285380:CDS
AATGTTTGGCAGTGCACGTT+TGG 0.364255 8_3:-29325703 Msa1285380:intron
AAACCCACATTTGGCATCAT+TGG 0.367842 8_3:-29328430 Msa1285380:CDS
TGCAACATCAAACCCACATT+TGG 0.375079 8_3:-29328439 Msa1285380:CDS
AATTCAATGTCAACTCTTGC+TGG 0.381752 8_3:-29325454 Msa1285380:three_prime_UTR
AATATCAGGACATGGCTAAC+TGG 0.398842 8_3:-29325558 Msa1285380:three_prime_UTR
AAACTGCCATGGTGATGATA+TGG 0.399008 8_3:-29329894 Msa1285380:CDS
AGGACATGGCTAACTGGCTT+TGG 0.411703 8_3:-29325552 Msa1285380:three_prime_UTR
ACTTTCAACATCTTTAATGA+TGG 0.412204 8_3:+29328706 None:intergenic
TTTGGCTCCCATGTTCTTGA+AGG 0.413263 8_3:+29327895 None:intergenic
ATCAGTTAATTTCAACCTCT+TGG 0.417906 8_3:+29328525 None:intergenic
CTGACCTATATTCATATAGA+AGG 0.421134 8_3:-29327838 Msa1285380:CDS
TTATATCTGTGGCTTATAGT+AGG 0.422982 8_3:-29325410 Msa1285380:three_prime_UTR
TTAGGAACTGTTGTTGACTT+TGG 0.424286 8_3:+29327877 None:intergenic
ATATCCTTCTATATGAATAT+AGG 0.426826 8_3:+29327834 None:intergenic
CTCTTGGCAGAAGGTGGAAC+GGG 0.427619 8_3:+29328541 None:intergenic
CTCAACTACCTCCGAGATCT+AGG 0.429478 8_3:-29328334 Msa1285380:CDS
GGAACTCTGGTCAAGAAATA+GGG 0.443858 8_3:+29328562 None:intergenic
CAGAAGATTCGTGTTGAAGC+AGG 0.446767 8_3:+29328109 None:intergenic
TTCTCGATGTCATCTTCAAA+CGG 0.453560 8_3:+29325627 None:intergenic
GAAATAGATTCTGATGGGCT+TGG 0.454859 8_3:-29328478 Msa1285380:CDS
CCACATGTAGACACATTCTC+CGG 0.456229 8_3:+29329967 None:intergenic
GGGATTCCTGCAGTTGCAGT+TGG 0.464051 8_3:+29330102 None:intergenic
GCTCCCAAAGGTGGCGCCAC+CGG 0.466109 8_3:+29330155 None:intergenic
GCCCATCAGAATCTATTTCA+AGG 0.471743 8_3:+29328482 None:intergenic
GGATTTCGGCAAACACCTTA+CGG 0.472350 8_3:-29328647 Msa1285380:CDS
CAGCTGAGTCAAATTTAAGT+TGG 0.474643 8_3:+29327653 None:intergenic
ATGTGGCATAGGAGTGAGTC+TGG 0.481345 8_3:+29330232 None:intergenic
ACATGGCTAACTGGCTTTGG+AGG 0.487649 8_3:-29325549 Msa1285380:three_prime_UTR
TTTCTGACTTTGAAAAGTTG+TGG 0.487713 8_3:-29325383 Msa1285380:three_prime_UTR
CAAGAAATAGGGAGAAAAGT+AGG 0.492659 8_3:+29328573 None:intergenic
ATCTTGAAGGTGGGGTCCAA+TGG 0.495026 8_3:+29329934 None:intergenic
TTACCTGAGGGAAACGAGAT+TGG 0.499649 8_3:+29329841 None:intergenic
CTTCTATATGAATATAGGTC+AGG 0.501363 8_3:+29327839 None:intergenic
GGAACACAACATTGACATTG+AGG 0.505951 8_3:-29328668 Msa1285380:CDS
GGAATGTCGATTTCTGAAGC+TGG 0.506103 8_3:-29325682 Msa1285380:three_prime_UTR
GCACCAATCTCGTTTCCCTC+AGG 0.507292 8_3:-29329844 Msa1285380:intron
TGACTCTAAATCTCGTGATA+AGG 0.507452 8_3:+29325511 None:intergenic
AACTGTCACCTTCAAGAACA+TGG 0.510013 8_3:-29327903 Msa1285380:CDS
GTAAACATCGGAGGTGCAGC+AGG 0.514352 8_3:+29329997 None:intergenic
ATTCATATAGAAGGATATCA+AGG 0.515119 8_3:-29327829 Msa1285380:CDS
GTATCTAGAGTTTCGAGTAC+GGG 0.521737 8_3:+29328595 None:intergenic
AAATTCTGGATAATTTAGAA+TGG 0.522156 8_3:+29328163 None:intergenic
ATGTGGGTCCGTGCTGCCAT+TGG 0.525161 8_3:-29329950 Msa1285380:CDS
CTCGGAGGTAGTTGAGCATA+GGG 0.525490 8_3:+29328341 None:intergenic
CCGGAGAATGTGTCTACATG+TGG 0.528018 8_3:-29329967 Msa1285380:CDS
GGTATCTAGAGTTTCGAGTA+CGG 0.529317 8_3:+29328594 None:intergenic
AGAAGGTGGAACGGGAACTC+TGG 0.530093 8_3:+29328549 None:intergenic
GATAAATTCACTTTCACGCA+AGG 0.530491 8_3:+29328366 None:intergenic
TCAAGGATTTGAAGATGAGC+TGG 0.532840 8_3:-29327812 Msa1285380:CDS
TAACTGATGTGAAATTCTCA+TGG 0.534368 8_3:-29328510 Msa1285380:CDS
CATTGGCGACTTGCAGAGCA+TGG 0.538592 8_3:-29328413 Msa1285380:CDS
TGCCTTGAAATAGATTCTGA+TGG 0.541668 8_3:-29328484 Msa1285380:CDS
GTAAATCACCACCTAGATCT+CGG 0.543700 8_3:+29328323 None:intergenic
TTCAACCTCTTGGCAGAAGG+TGG 0.544820 8_3:+29328535 None:intergenic
GAGAGACAAATCTTGAAGGT+GGG 0.551283 8_3:+29329925 None:intergenic
GTCGCCAATGATGCCAAATG+TGG 0.552977 8_3:+29328426 None:intergenic
ACGAGTCCAACTGCAACTGC+AGG 0.555167 8_3:-29330108 Msa1285380:CDS
AATTTCAACCTCTTGGCAGA+AGG 0.555823 8_3:+29328532 None:intergenic
TATTGAGAGACAAATCTTGA+AGG 0.559357 8_3:+29329921 None:intergenic
GATGGGCTTGGTATAGAGTA+CGG 0.560809 8_3:-29328466 Msa1285380:CDS
CCGTTCCACCTTCTGCCAAG+AGG 0.561402 8_3:-29328540 Msa1285380:CDS
TCTCGGAGGTAGTTGAGCAT+AGG 0.566965 8_3:+29328340 None:intergenic
CTCAATATTACAAACTGCCA+TGG 0.567570 8_3:-29329905 Msa1285380:CDS
AATGAGACTGGTCGTCATGA+CGG 0.569460 8_3:+29330183 None:intergenic
TTCTGGATAATTTAGAATGG+AGG 0.569635 8_3:+29328166 None:intergenic
GTGCAATTCAAGAGGGAAGG+AGG 0.570678 8_3:+29329863 None:intergenic
CCTCTTGGCAGAAGGTGGAA+CGG 0.574775 8_3:+29328540 None:intergenic
GCCTTGAAATAGATTCTGAT+GGG 0.576126 8_3:-29328483 Msa1285380:CDS
AGAGACAAATCTTGAAGGTG+GGG 0.579971 8_3:+29329926 None:intergenic
TAGGAAGGAATGATAGGATG+TGG 0.580585 8_3:+29330215 None:intergenic
CGAGATTGGTGCAATTCAAG+AGG 0.585120 8_3:+29329855 None:intergenic
AAGATTAACTGATATACCAA+GGG 0.586408 8_3:-29327689 Msa1285380:CDS
TGAGAGACAAATCTTGAAGG+TGG 0.586669 8_3:+29329924 None:intergenic
CGTTTAGATGCTCCCAAAGG+TGG 0.589564 8_3:+29330146 None:intergenic
AGACAAGTATTGAATCCGTA+AGG 0.589853 8_3:+29328632 None:intergenic
CTATATGAATATAGGTCAGG+TGG 0.596905 8_3:+29327842 None:intergenic
AAATTAGTCAATTATATCTG+TGG 0.599196 8_3:-29325421 Msa1285380:three_prime_UTR
TCTCATAATTCAGAGTAGCA+AGG 0.602330 8_3:-29328051 Msa1285380:intron
CACATGTAGACACATTCTCC+GGG 0.602843 8_3:+29329968 None:intergenic
AAAGATTAACTGATATACCA+AGG 0.603237 8_3:-29327690 Msa1285380:CDS
AATTGGCTAATATCAGGACA+TGG 0.606301 8_3:-29325566 Msa1285380:three_prime_UTR
GGAATGATAGGATGTGGCAT+AGG 0.607252 8_3:+29330221 None:intergenic
TGCAATTCAAGAGGGAAGGA+GGG 0.610260 8_3:+29329864 None:intergenic
TGGCATGTGACAGAGCCCCT+TGG 0.611510 8_3:+29327673 None:intergenic
CCACCGGCGAGAAATGAGAC+TGG 0.613340 8_3:+29330171 None:intergenic
TTGGTGCAATTCAAGAGGGA+AGG 0.614725 8_3:+29329860 None:intergenic
AGAAGATTCGTGTTGAAGCA+GGG 0.616763 8_3:+29328110 None:intergenic
GGTGGGGTCCAATGGCAGCA+CGG 0.623491 8_3:+29329942 None:intergenic
CGGAGAATGTGTCTACATGT+GGG 0.624898 8_3:-29329966 Msa1285380:CDS
TCTGCGTCATTCGACATCAA+AGG 0.627655 8_3:-29328293 Msa1285380:intron
TGGAGTGACACAAACTGCGA+TGG 0.634576 8_3:-29330308 Msa1285380:exon
ACATTACTGAGTCGTAATCA+CGG 0.635537 8_3:+29325480 None:intergenic
TATATGAATATAGGTCAGGT+GGG 0.636912 8_3:+29327843 None:intergenic
TCGCCAATGATGCCAAATGT+GGG 0.638534 8_3:+29328427 None:intergenic
ACAACGCCGATGTCATCGAT+AGG 0.638817 8_3:-29330267 Msa1285380:CDS
CGACCAGTCTCATTTCTCGC+CGG 0.645753 8_3:-29330174 Msa1285380:CDS
TCCGGGAAAACTGTAAACAT+CGG 0.646181 8_3:+29329985 None:intergenic
AGTGACACAAACTGCGATGG+CGG 0.649473 8_3:-29330305 Msa1285380:exon
GAGATTGGTGCAATTCAAGA+GGG 0.651966 8_3:+29329856 None:intergenic
TATCTAGAGTTTCGAGTACG+GGG 0.652748 8_3:+29328596 None:intergenic
GAATGTGGCGAGATTTACGG+AGG 0.663346 8_3:+29330035 None:intergenic
ACTGTCACCTTCAAGAACAT+GGG 0.664797 8_3:-29327902 Msa1285380:CDS
CATGTTTGCTCAGATGCTTG+AGG 0.671266 8_3:-29325652 Msa1285380:three_prime_UTR
ACTCATCCTATCGATGACAT+CGG 0.671936 8_3:+29330261 None:intergenic
TTTAGAATGGAGGTGCGAAG+CGG 0.678446 8_3:+29328176 None:intergenic
GATAAACCATATCATCACCA+TGG 0.684982 8_3:+29329888 None:intergenic
GGGAAAACTGTAAACATCGG+AGG 0.685985 8_3:+29329988 None:intergenic
AGACGTTTAGATGCTCCCAA+AGG 0.690304 8_3:+29330143 None:intergenic
AATGTGGCGAGATTTACGGA+GGG 0.699134 8_3:+29330036 None:intergenic
GAGACTGGTCGTCATGACGG+AGG 0.708481 8_3:+29330186 None:intergenic
AACTACCTCCGAGATCTAGG+TGG 0.714851 8_3:-29328331 Msa1285380:CDS
AGATTAACTGATATACCAAG+GGG 0.725053 8_3:-29327688 Msa1285380:CDS
TGGCGACTTGCAGAGCATGG+AGG 0.730260 8_3:-29328410 Msa1285380:CDS
AATCACCACCTAGATCTCGG+AGG 0.782019 8_3:+29328326 None:intergenic
GGGCTTGGTATAGAGTACGG+TGG 0.786992 8_3:-29328463 Msa1285380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTTAATCATATGAAAT+TGG - chr8_3:29326615-29326634 Msa1285380:intron 10.0%
!! AAAAAAATAAACAAATTTGG+AGG - chr8_3:29326223-29326242 Msa1285380:intron 15.0%
!!! AGTTTGAGTATTTTTTTATA+GGG - chr8_3:29326357-29326376 Msa1285380:intron 15.0%
!!! ACTTCATAAAAATGAATTTT+TGG + chr8_3:29326728-29326747 None:intergenic 15.0%
!!! GGTTAAATTAAATCAATTTT+TGG - chr8_3:29327649-29327668 Msa1285380:CDS 15.0%
!! TAACTAAATCAAATACAAAT+TGG + chr8_3:29328424-29328443 None:intergenic 15.0%
!!! ATTTTCATTATAATCCTATT+TGG - chr8_3:29328445-29328464 Msa1285380:CDS 15.0%
!! TTCATTTGTAGAATAAAATA+TGG + chr8_3:29328997-29329016 None:intergenic 15.0%
!!! AAATTTTTTTTTTCTTTAGC+AGG - chr8_3:29329221-29329240 Msa1285380:intron 15.0%
!! ATATTTGTATCACATTATAA+AGG - chr8_3:29329852-29329871 Msa1285380:CDS 15.0%
!!! GCTTTAAATAGAATCAATTT+TGG - chr8_3:29326026-29326045 Msa1285380:intron 20.0%
!!! GAGTTTGAGTATTTTTTTAT+AGG - chr8_3:29326356-29326375 Msa1285380:intron 20.0%
!!! GTTTGAGTATTTTTTTATAG+GGG - chr8_3:29326358-29326377 Msa1285380:intron 20.0%
!!! TATTTTTTTATAGGGGATTA+AGG - chr8_3:29326365-29326384 Msa1285380:intron 20.0%
!!! ATTTTTTTATAGGGGATTAA+GGG - chr8_3:29326366-29326385 Msa1285380:intron 20.0%
!!! TCAATTTTAAACTTGATATC+CGG + chr8_3:29326553-29326572 None:intergenic 20.0%
!! TAAATATGGAAATGAAAACT+TGG - chr8_3:29326654-29326673 Msa1285380:intron 20.0%
!!! TTTGGATATCATTTTCTTTA+TGG + chr8_3:29326710-29326729 None:intergenic 20.0%
!!! CAGAATGTTGAAATTTTAAA+TGG + chr8_3:29326925-29326944 None:intergenic 20.0%
!!! AAGGTGAAGTTTTATTATTA+TGG - chr8_3:29327388-29327407 Msa1285380:intron 20.0%
!! AAATTCTGGATAATTTAGAA+TGG + chr8_3:29327502-29327521 None:intergenic 20.0%
!! ATATCCTTCTATATGAATAT+AGG + chr8_3:29327831-29327850 None:intergenic 20.0%
!!! ATTTCAGTATCTTTTCAATA+TGG - chr8_3:29328222-29328241 Msa1285380:intron 20.0%
!! AATACAAATTGGATATTCTA+GGG + chr8_3:29328413-29328432 None:intergenic 20.0%
!! AAATACAAATTGGATATTCT+AGG + chr8_3:29328414-29328433 None:intergenic 20.0%
!!! ATTATAATCCTATTTGGAAT+TGG - chr8_3:29328451-29328470 Msa1285380:CDS 20.0%
!! TTAAACATGAATAGTAATAG+GGG + chr8_3:29328510-29328529 None:intergenic 20.0%
!! CTTAAACATGAATAGTAATA+GGG + chr8_3:29328511-29328530 None:intergenic 20.0%
!! TCTTAAACATGAATAGTAAT+AGG + chr8_3:29328512-29328531 None:intergenic 20.0%
!! ATAGACAATGATTTAGAAAT+TGG + chr8_3:29328688-29328707 None:intergenic 20.0%
!! TTTCTAAATCATTGTCTATT+TGG - chr8_3:29328689-29328708 Msa1285380:CDS 20.0%
!! TTCTAAATCATTGTCTATTT+GGG - chr8_3:29328690-29328709 Msa1285380:CDS 20.0%
!! TATTATAACAAAAAGATGTG+TGG + chr8_3:29328740-29328759 None:intergenic 20.0%
!! AAAAGTTTAAATATATCGAC+CGG + chr8_3:29328869-29328888 None:intergenic 20.0%
!!! TTAGAACTAGTTTACAAAAA+TGG + chr8_3:29328938-29328957 None:intergenic 20.0%
!! TAGAATAAAATATGGTTGAA+TGG + chr8_3:29328989-29329008 None:intergenic 20.0%
!! ATATGATTTCATATTAGAGT+TGG + chr8_3:29329081-29329100 None:intergenic 20.0%
!! ATTATTGAAAATGACATTCT+CGG + chr8_3:29329402-29329421 None:intergenic 20.0%
!! GTTATCTAATAACCAATAAA+AGG + chr8_3:29329734-29329753 None:intergenic 20.0%
!!! TTTTTTAATTGGCTAATATC+AGG - chr8_3:29330090-29330109 Msa1285380:CDS 20.0%
!! AAATTAGTCAATTATATCTG+TGG - chr8_3:29330241-29330260 Msa1285380:CDS 20.0%
!! AAACAAAACTCTCTTTTAGT+CGG + chr8_3:29325930-29325949 None:intergenic 25.0%
!!! AGTTTTGTTTTGGCTTTAAA+TGG - chr8_3:29326160-29326179 Msa1285380:intron 25.0%
!!! GTTTTGTTTTGGCTTTAAAT+GGG - chr8_3:29326161-29326180 Msa1285380:intron 25.0%
!!! TTTTGTTTTGGCTTTAAATG+GGG - chr8_3:29326162-29326181 Msa1285380:intron 25.0%
!!! AGGTGTAAAATTGATTTGTT+TGG + chr8_3:29326274-29326293 None:intergenic 25.0%
!! AGAAGTCAAAGTTGATTTAA+AGG + chr8_3:29326294-29326313 None:intergenic 25.0%
! TATACATCTTAGTGTATGTT+TGG + chr8_3:29326329-29326348 None:intergenic 25.0%
! AAAAAAATACTCAAACTCCA+GGG + chr8_3:29326354-29326373 None:intergenic 25.0%
! TAAAAAAATACTCAAACTCC+AGG + chr8_3:29326355-29326374 None:intergenic 25.0%
!!! GCATTGTCATGTTTTAAATA+TGG - chr8_3:29326640-29326659 Msa1285380:intron 25.0%
! ACTTTCAACATCTTTAATGA+TGG + chr8_3:29326959-29326978 None:intergenic 25.0%
! AATATAATTGAGTCATTGTG+TGG - chr8_3:29327718-29327737 Msa1285380:CDS 25.0%
! ATTCATATAGAAGGATATCA+AGG - chr8_3:29327833-29327852 Msa1285380:CDS 25.0%
!!! CATTTTTTTCGATACTTCAA+TGG - chr8_3:29327922-29327941 Msa1285380:intron 25.0%
! AAAGATTAACTGATATACCA+AGG - chr8_3:29327972-29327991 Msa1285380:intron 25.0%
! AAGATTAACTGATATACCAA+GGG - chr8_3:29327973-29327992 Msa1285380:intron 25.0%
! AAATTAATGATGGTTAAGAC+TGG - chr8_3:29328086-29328105 Msa1285380:CDS 25.0%
! AATTAATGATGGTTAAGACT+GGG - chr8_3:29328087-29328106 Msa1285380:CDS 25.0%
!!! TTAGAAGTGTTTCATGATAT+AGG - chr8_3:29328124-29328143 Msa1285380:CDS 25.0%
!!! GTTTGAGAGAAATTTTGAAA+AGG + chr8_3:29328250-29328269 None:intergenic 25.0%
! CCACAAAATAGTTAAAAATG+CGG + chr8_3:29328369-29328388 None:intergenic 25.0%
! ATACAAATTGGATATTCTAG+GGG + chr8_3:29328412-29328431 None:intergenic 25.0%
! TATCTTGTTCACTAATATTC+AGG - chr8_3:29328589-29328608 Msa1285380:CDS 25.0%
! TCTAAATCATTGTCTATTTG+GGG - chr8_3:29328691-29328710 Msa1285380:CDS 25.0%
! AAATGGTCAAAAAAACTTAG+CGG + chr8_3:29328921-29328940 None:intergenic 25.0%
!! TTTATGTCATTTGCATTTGT+TGG - chr8_3:29329131-29329150 Msa1285380:intron 25.0%
!! TTATGTCATTTGCATTTGTT+GGG - chr8_3:29329132-29329151 Msa1285380:intron 25.0%
! AAAAAATTTAACAAGAGCTC+AGG + chr8_3:29329210-29329229 None:intergenic 25.0%
! TTCACAAAATTTGCAATGAT+TGG + chr8_3:29329444-29329463 None:intergenic 25.0%
!! GTTTCGATTTTCAAAGTTTA+TGG - chr8_3:29329572-29329591 Msa1285380:intron 25.0%
! ACAATTGTCTAACAAAAAGT+GGG + chr8_3:29329635-29329654 None:intergenic 25.0%
! AACAATTGTCTAACAAAAAG+TGG + chr8_3:29329636-29329655 None:intergenic 25.0%
!! ACATTATAAAGGCATAGTTT+AGG - chr8_3:29329863-29329882 Msa1285380:CDS 25.0%
!! TTGTTAGTAGTAAACTTTTG+TGG - chr8_3:29329913-29329932 Msa1285380:CDS 25.0%
!! TGTTAGTAGTAAACTTTTGT+GGG - chr8_3:29329914-29329933 Msa1285380:CDS 25.0%
!!! AGTTCGCATGTTTTTTTAAT+TGG - chr8_3:29330079-29330098 Msa1285380:CDS 25.0%
! GCAAACTTTCTGAACTTTTT+GGG + chr8_3:29325583-29325602 None:intergenic 30.0%
! TGCAAACTTTCTGAACTTTT+TGG + chr8_3:29325584-29325603 None:intergenic 30.0%
! TGAGATGAAATTTTCGAATG+TGG + chr8_3:29325645-29325664 None:intergenic 30.0%
TATTGAGAGACAAATCTTGA+AGG + chr8_3:29325744-29325763 None:intergenic 30.0%
! GTGATGAAAGCATGAAATTA+GGG + chr8_3:29325847-29325866 None:intergenic 30.0%
! TGTGATGAAAGCATGAAATT+AGG + chr8_3:29325848-29325867 None:intergenic 30.0%
!!! GACTAAAAGAGAGTTTTGTT+TGG - chr8_3:29325929-29325948 Msa1285380:intron 30.0%
AAAAAATACTCAAACTCCAG+GGG + chr8_3:29326353-29326372 None:intergenic 30.0%
AACCCAACACAAAAATTGAT+GGG + chr8_3:29326445-29326464 None:intergenic 30.0%
TAACCCAACACAAAAATTGA+TGG + chr8_3:29326446-29326465 None:intergenic 30.0%
! CATTTTCTTTATGGTGCATA+TGG + chr8_3:29326701-29326720 None:intergenic 30.0%
! AATGTTTTCAAAAGACAGGT+TGG + chr8_3:29326883-29326902 None:intergenic 30.0%
! TGAAAACATTGCAGTCTTTT+TGG - chr8_3:29326893-29326912 Msa1285380:intron 30.0%
AACATTGACATTGAGGATTT+CGG - chr8_3:29327001-29327020 Msa1285380:intron 30.0%
ATCAGTTAATTTCAACCTCT+TGG + chr8_3:29327140-29327159 None:intergenic 30.0%
TAACTGATGTGAAATTCTCA+TGG - chr8_3:29327152-29327171 Msa1285380:intron 30.0%
! TTCTGGATAATTTAGAATGG+AGG + chr8_3:29327499-29327518 None:intergenic 30.0%
TGATGCAAATTGCAAAATTC+TGG + chr8_3:29327516-29327535 None:intergenic 30.0%
TATATGAATATAGGTCAGGT+GGG + chr8_3:29327822-29327841 None:intergenic 30.0%
CTTCTATATGAATATAGGTC+AGG + chr8_3:29327826-29327845 None:intergenic 30.0%
CTGACCTATATTCATATAGA+AGG - chr8_3:29327824-29327843 Msa1285380:CDS 30.0%
! GCTGAATATATTTTGCGTAA+CGG - chr8_3:29327878-29327897 Msa1285380:CDS 30.0%
! TAGAACAGTTCTTGTTTGTT+AGG + chr8_3:29327949-29327968 None:intergenic 30.0%
AGATTAACTGATATACCAAG+GGG - chr8_3:29327974-29327993 Msa1285380:intron 30.0%
!!! CATTCTCTCTCTTTTTTATG+CGG - chr8_3:29328057-29328076 Msa1285380:CDS 30.0%
!! CATCCAATTTTAGTGGAAAT+CGG + chr8_3:29328314-29328333 None:intergenic 30.0%
!! CCGCATTTTTAACTATTTTG+TGG - chr8_3:29328366-29328385 Msa1285380:CDS 30.0%
TTAAGAATTTCAAGCTTTGC+AGG - chr8_3:29328526-29328545 Msa1285380:CDS 30.0%
TATAACTAAGTTGCAACAAG+TGG + chr8_3:29328635-29328654 None:intergenic 30.0%
CAACTTAGTTATATTGTGCT+GGG - chr8_3:29328642-29328661 Msa1285380:CDS 30.0%
AAAGTTGACAATATTTCCTC+AGG + chr8_3:29328810-29328829 None:intergenic 30.0%
AATTGTTAAGCGACTTTAGT+AGG - chr8_3:29328956-29328975 Msa1285380:intron 30.0%
GCAAAACATTAACAAAAGGA+GGG + chr8_3:29329291-29329310 None:intergenic 30.0%
TGCAAAACATTAACAAAAGG+AGG + chr8_3:29329292-29329311 None:intergenic 30.0%
GCATGCAAAACATTAACAAA+AGG + chr8_3:29329295-29329314 None:intergenic 30.0%
! TAATGTTTTGCATGCTTTGT+AGG - chr8_3:29329300-29329319 Msa1285380:intron 30.0%
! AACTTCTTTTACTGCAGAAA+AGG - chr8_3:29329609-29329628 Msa1285380:intron 30.0%
ACAACAGATTATTAGAGCTT+TGG + chr8_3:29329688-29329707 None:intergenic 30.0%
AATAAAAGGCAAGTCGTAAA+TGG + chr8_3:29329720-29329739 None:intergenic 30.0%
! ATTTACGACTTGCCTTTTAT+TGG - chr8_3:29329719-29329738 Msa1285380:intron 30.0%
! AACTTTTGCTGCTAAATGTT+TGG - chr8_3:29329945-29329964 Msa1285380:CDS 30.0%
TTATATCTGTGGCTTATAGT+AGG - chr8_3:29330252-29330271 Msa1285380:CDS 30.0%
! TTTCTGACTTTGAAAAGTTG+TGG - chr8_3:29330279-29330298 Msa1285380:CDS 30.0%
! TTTTGGTAGGAAGGAATGAT+AGG + chr8_3:29325456-29325475 None:intergenic 35.0%
CTCAATATTACAAACTGCCA+TGG - chr8_3:29325757-29325776 Msa1285380:intron 35.0%
GATAAACCATATCATCACCA+TGG + chr8_3:29325777-29325796 None:intergenic 35.0%
ATGAAATTAGGGTTACCTGA+GGG + chr8_3:29325836-29325855 None:intergenic 35.0%
TTGGAGTAAAAACACCCATT+TGG - chr8_3:29326045-29326064 Msa1285380:intron 35.0%
TGGAGTAAAAACACCCATTT+GGG - chr8_3:29326046-29326065 Msa1285380:intron 35.0%
TAGAGGGAATCAAATTTGAG+AGG + chr8_3:29326110-29326129 None:intergenic 35.0%
!!! GTCCATGCAAAGTTTTGTTT+TGG - chr8_3:29326150-29326169 Msa1285380:intron 35.0%
AGCCAAAACAAAACTTTGCA+TGG + chr8_3:29326155-29326174 None:intergenic 35.0%
! AACTTTGACTTCTCTAGAAG+TGG - chr8_3:29326301-29326320 Msa1285380:intron 35.0%
TTTATAGGGGATTAAGGGTT+AGG - chr8_3:29326371-29326390 Msa1285380:intron 35.0%
TTATAGGGGATTAAGGGTTA+GGG - chr8_3:29326372-29326391 Msa1285380:intron 35.0%
! ATCCCCATCAATTTTTGTGT+TGG - chr8_3:29326439-29326458 Msa1285380:intron 35.0%
! TCCCCATCAATTTTTGTGTT+GGG - chr8_3:29326440-29326459 Msa1285380:intron 35.0%
ACCCAACACAAAAATTGATG+GGG + chr8_3:29326444-29326463 None:intergenic 35.0%
! CTGCAATGTTTTCAAAAGAC+AGG + chr8_3:29326887-29326906 None:intergenic 35.0%
GAAAGTCGAATTCAGCATAT+TGG - chr8_3:29326973-29326992 Msa1285380:intron 35.0%
!! AGACAAGTATTGAATCCGTA+AGG + chr8_3:29327033-29327052 None:intergenic 35.0%
TCAATACTTGTCTTTCTCTC+TGG - chr8_3:29327040-29327059 Msa1285380:intron 35.0%
CAAGAAATAGGGAGAAAAGT+AGG + chr8_3:29327092-29327111 None:intergenic 35.0%
TGCCTTGAAATAGATTCTGA+TGG - chr8_3:29327178-29327197 Msa1285380:intron 35.0%
GCCTTGAAATAGATTCTGAT+GGG - chr8_3:29327179-29327198 Msa1285380:intron 35.0%
GATAAATTCACTTTCACGCA+AGG + chr8_3:29327299-29327318 None:intergenic 35.0%
TTGTACACGATAACAAGTGA+TGG + chr8_3:29327459-29327478 None:intergenic 35.0%
TCTCATAATTCAGAGTAGCA+AGG - chr8_3:29327611-29327630 Msa1285380:intron 35.0%
!! TTAGGAACTGTTGTTGACTT+TGG + chr8_3:29327788-29327807 None:intergenic 35.0%
CTATATGAATATAGGTCAGG+TGG + chr8_3:29327823-29327842 None:intergenic 35.0%
CAGCTGAGTCAAATTTAAGT+TGG + chr8_3:29328012-29328031 None:intergenic 35.0%
GCGGTGTACTAAATTAATGA+TGG - chr8_3:29328076-29328095 Msa1285380:CDS 35.0%
CTGTTAGATAGTGATGTAGT+TGG - chr8_3:29328160-29328179 Msa1285380:CDS 35.0%
! CAAGGTACATCCAATTTTAG+TGG + chr8_3:29328321-29328340 None:intergenic 35.0%
GACATGCATGTAAAAACACA+AGG + chr8_3:29328339-29328358 None:intergenic 35.0%
!! GTGTTTTTACATGCATGTCA+TGG - chr8_3:29328340-29328359 Msa1285380:CDS 35.0%
GCAACTTAGTTATATTGTGC+TGG - chr8_3:29328641-29328660 Msa1285380:CDS 35.0%
TTGATCTTCTATTAAGCCTG+AGG - chr8_3:29328791-29328810 Msa1285380:intron 35.0%
TTTAAATATATCGACCGGAC+AGG + chr8_3:29328864-29328883 None:intergenic 35.0%
TTAAGCGACTTTAGTAGGTT+AGG - chr8_3:29328961-29328980 Msa1285380:intron 35.0%
GGTATCTCTAATGTAAGTCT+TGG + chr8_3:29329060-29329079 None:intergenic 35.0%
AGCATTACTGTGCATTTCAA+GGG + chr8_3:29329178-29329197 None:intergenic 35.0%
AAGCATTACTGTGCATTTCA+AGG + chr8_3:29329179-29329198 None:intergenic 35.0%
AGCGGAAAATATCAAATGTG+TGG + chr8_3:29329257-29329276 None:intergenic 35.0%
AAACATTAACAAAAGGAGGG+AGG + chr8_3:29329288-29329307 None:intergenic 35.0%
! CAATTGATAACAACACCTGA+TGG + chr8_3:29329329-29329348 None:intergenic 35.0%
TTCAATCCATAGGCATAATC+GGG + chr8_3:29329809-29329828 None:intergenic 35.0%
GTTCAATCCATAGGCATAAT+CGG + chr8_3:29329810-29329829 None:intergenic 35.0%
TTCTCGATGTCATCTTCAAA+CGG + chr8_3:29330038-29330057 None:intergenic 35.0%
AATTGGCTAATATCAGGACA+TGG - chr8_3:29330096-29330115 Msa1285380:CDS 35.0%
TGACTCTAAATCTCGTGATA+AGG + chr8_3:29330154-29330173 None:intergenic 35.0%
ACATTACTGAGTCGTAATCA+CGG + chr8_3:29330185-29330204 None:intergenic 35.0%
AATTCAATGTCAACTCTTGC+TGG - chr8_3:29330208-29330227 Msa1285380:CDS 35.0%
! GTTTTGCGACTCAAAATCTT+AGG + chr8_3:29330323-29330342 None:intergenic 35.0%
!! AAGATTTTGAGTCGCAAAAC+AGG - chr8_3:29330323-29330342 Msa1285380:five_prime_UTR 35.0%
ACTCATCCTATCGATGACAT+CGG + chr8_3:29325404-29325423 None:intergenic 40.0%
TAGGAAGGAATGATAGGATG+TGG + chr8_3:29325450-29325469 None:intergenic 40.0%
TTCGAATGTGGCGAGATTTA+CGG + chr8_3:29325633-29325652 None:intergenic 40.0%
! TCCGATGTTTACAGTTTTCC+CGG - chr8_3:29325676-29325695 Msa1285380:three_prime_UTR 40.0%
TCCGGGAAAACTGTAAACAT+CGG + chr8_3:29325680-29325699 None:intergenic 40.0%
AGAGACAAATCTTGAAGGTG+GGG + chr8_3:29325739-29325758 None:intergenic 40.0%
GAGAGACAAATCTTGAAGGT+GGG + chr8_3:29325740-29325759 None:intergenic 40.0%
TGAGAGACAAATCTTGAAGG+TGG + chr8_3:29325741-29325760 None:intergenic 40.0%
! AAACTGCCATGGTGATGATA+TGG - chr8_3:29325768-29325787 Msa1285380:intron 40.0%
GAGATTGGTGCAATTCAAGA+GGG + chr8_3:29325809-29325828 None:intergenic 40.0%
CATGAAATTAGGGTTACCTG+AGG + chr8_3:29325837-29325856 None:intergenic 40.0%
GGAGTAAAAACACCCATTTG+GGG - chr8_3:29326047-29326066 Msa1285380:intron 40.0%
! TAAAAACACCCATTTGGGGT+TGG - chr8_3:29326051-29326070 Msa1285380:intron 40.0%
ATTCCCTCTACTGCCAATTT+CGG - chr8_3:29326120-29326139 Msa1285380:intron 40.0%
ACACTAAGATGTATAACCCC+TGG - chr8_3:29326334-29326353 Msa1285380:intron 40.0%
! ATAGAGAAGAGCACACTCAT+AGG + chr8_3:29326405-29326424 None:intergenic 40.0%
!! AACTTTGCTCTGGCTTTGAT+TGG - chr8_3:29326476-29326495 Msa1285380:intron 40.0%
TGATTGGACCTAGTAGTGAA+CGG - chr8_3:29326492-29326511 Msa1285380:intron 40.0%
TAAACTTGATATCCGGACCA+AGG + chr8_3:29326546-29326565 None:intergenic 40.0%
GGAACACAACATTGACATTG+AGG - chr8_3:29326994-29327013 Msa1285380:intron 40.0%
! TATCTAGAGTTTCGAGTACG+GGG + chr8_3:29327069-29327088 None:intergenic 40.0%
! GTATCTAGAGTTTCGAGTAC+GGG + chr8_3:29327070-29327089 None:intergenic 40.0%
! GGTATCTAGAGTTTCGAGTA+CGG + chr8_3:29327071-29327090 None:intergenic 40.0%
GGAACTCTGGTCAAGAAATA+GGG + chr8_3:29327103-29327122 None:intergenic 40.0%
AATTTCAACCTCTTGGCAGA+AGG + chr8_3:29327133-29327152 None:intergenic 40.0%
GCCCATCAGAATCTATTTCA+AGG + chr8_3:29327183-29327202 None:intergenic 40.0%
!! GAAATAGATTCTGATGGGCT+TGG - chr8_3:29327184-29327203 Msa1285380:intron 40.0%
TGCAACATCAAACCCACATT+TGG - chr8_3:29327223-29327242 Msa1285380:intron 40.0%
AAACCCACATTTGGCATCAT+TGG - chr8_3:29327232-29327251 Msa1285380:intron 40.0%
GTAAATCACCACCTAGATCT+CGG + chr8_3:29327342-29327361 None:intergenic 40.0%
AGAAGATTCGTGTTGAAGCA+GGG + chr8_3:29327555-29327574 None:intergenic 40.0%
AACTGTCACCTTCAAGAACA+TGG - chr8_3:29327759-29327778 Msa1285380:CDS 40.0%
ACTGTCACCTTCAAGAACAT+GGG - chr8_3:29327760-29327779 Msa1285380:CDS 40.0%
AGGTGGGATTCAAGACATTT+AGG + chr8_3:29327806-29327825 None:intergenic 40.0%
TCAAGGATTTGAAGATGAGC+TGG - chr8_3:29327850-29327869 Msa1285380:CDS 40.0%
! ATGAGGAGAGTATGGGAAAA+AGG + chr8_3:29328288-29328307 None:intergenic 40.0%
!! CCAATTTTAGTGGAAATCGG+AGG + chr8_3:29328311-29328330 None:intergenic 40.0%
CCTCCGATTTCCACTAAAAT+TGG - chr8_3:29328308-29328327 Msa1285380:CDS 40.0%
! ACAGAGCACCAATTCCAAAT+AGG + chr8_3:29328462-29328481 None:intergenic 40.0%
AATTTCAAGCTTTGCAGGAG+TGG - chr8_3:29328531-29328550 Msa1285380:CDS 40.0%
! TCATTGTCTATTTGGGGCAT+TGG - chr8_3:29328697-29328716 Msa1285380:CDS 40.0%
AGATGTGTGGATTCACAGAA+GGG + chr8_3:29328727-29328746 None:intergenic 40.0%
AAGATGTGTGGATTCACAGA+AGG + chr8_3:29328728-29328747 None:intergenic 40.0%
TGGTCAAAAAAACTTAGCGG+AGG + chr8_3:29328918-29328937 None:intergenic 40.0%
ATGCTTTGTAGGTATCCATC+AGG - chr8_3:29329311-29329330 Msa1285380:intron 40.0%
GTAAATCCCGATTATGCCTA+TGG - chr8_3:29329800-29329819 Msa1285380:intron 40.0%
AATATCAGGACATGGCTAAC+TGG - chr8_3:29330104-29330123 Msa1285380:CDS 40.0%
GGAATGATAGGATGTGGCAT+AGG + chr8_3:29325444-29325463 None:intergenic 45.0%
! AATGAGACTGGTCGTCATGA+CGG + chr8_3:29325482-29325501 None:intergenic 45.0%
AGACGTTTAGATGCTCCCAA+AGG + chr8_3:29325522-29325541 None:intergenic 45.0%
AATGTGGCGAGATTTACGGA+GGG + chr8_3:29325629-29325648 None:intergenic 45.0%
GGGAAAACTGTAAACATCGG+AGG + chr8_3:29325677-29325696 None:intergenic 45.0%
CACATGTAGACACATTCTCC+GGG + chr8_3:29325697-29325716 None:intergenic 45.0%
CCACATGTAGACACATTCTC+CGG + chr8_3:29325698-29325717 None:intergenic 45.0%
CGGAGAATGTGTCTACATGT+GGG - chr8_3:29325696-29325715 Msa1285380:intron 45.0%
TGCAATTCAAGAGGGAAGGA+GGG + chr8_3:29325801-29325820 None:intergenic 45.0%
TTGGTGCAATTCAAGAGGGA+AGG + chr8_3:29325805-29325824 None:intergenic 45.0%
CGAGATTGGTGCAATTCAAG+AGG + chr8_3:29325810-29325829 None:intergenic 45.0%
TTACCTGAGGGAAACGAGAT+TGG + chr8_3:29325824-29325843 None:intergenic 45.0%
GGGATTAAGGGTTAGGGTTT+GGG - chr8_3:29326378-29326397 Msa1285380:intron 45.0%
GTCCATACACAACTTTGCTC+TGG - chr8_3:29326466-29326485 Msa1285380:intron 45.0%
AGCCAGAGCAAAGTTGTGTA+TGG + chr8_3:29326471-29326490 None:intergenic 45.0%
CAACTCAACCGTTCACTACT+AGG + chr8_3:29326503-29326522 None:intergenic 45.0%
CTAGTAGTGAACGGTTGAGT+TGG - chr8_3:29326501-29326520 Msa1285380:intron 45.0%
!! GTTGAGTTGGTCTGCAGATT+AGG - chr8_3:29326514-29326533 Msa1285380:intron 45.0%
GGATTTCGGCAAACACCTTA+CGG - chr8_3:29327015-29327034 Msa1285380:intron 45.0%
GGGAACTCTGGTCAAGAAAT+AGG + chr8_3:29327104-29327123 None:intergenic 45.0%
! GATGGGCTTGGTATAGAGTA+CGG - chr8_3:29327196-29327215 Msa1285380:intron 45.0%
TCGCCAATGATGCCAAATGT+GGG + chr8_3:29327238-29327257 None:intergenic 45.0%
TCTGCGTCATTCGACATCAA+AGG - chr8_3:29327369-29327388 Msa1285380:intron 45.0%
! TTTAGAATGGAGGTGCGAAG+CGG + chr8_3:29327489-29327508 None:intergenic 45.0%
CAGAAGATTCGTGTTGAAGC+AGG + chr8_3:29327556-29327575 None:intergenic 45.0%
GCAAGGTTTGTAGAGTTCTC+AGG - chr8_3:29327628-29327647 Msa1285380:intron 45.0%
!! TTGTGTGGCTTGTTGCTTCT+AGG - chr8_3:29327733-29327752 Msa1285380:CDS 45.0%
! TTTGGCTCCCATGTTCTTGA+AGG + chr8_3:29327770-29327789 None:intergenic 45.0%
GACTCAGCTGTGTCTCTATA+AGG - chr8_3:29328022-29328041 Msa1285380:intron 45.0%
TTAGTGGAAATCGGAGGATG+AGG + chr8_3:29328305-29328324 None:intergenic 45.0%
AAGAAAACAAGCCACCTGTC+CGG - chr8_3:29328847-29328866 Msa1285380:intron 45.0%
AAATATATCGACCGGACAGG+TGG + chr8_3:29328861-29328880 None:intergenic 45.0%
CATTAACAAAAGGAGGGAGG+AGG + chr8_3:29329285-29329304 None:intergenic 45.0%
AATGTTTGGCAGTGCACGTT+TGG - chr8_3:29329959-29329978 Msa1285380:CDS 45.0%
!! GGAATGTCGATTTCTGAAGC+TGG - chr8_3:29329980-29329999 Msa1285380:CDS 45.0%
CATGTTTGCTCAGATGCTTG+AGG - chr8_3:29330010-29330029 Msa1285380:CDS 45.0%
!! AAAAAAAAAATAAACAAATT+TGG - chr8_3:29326220-29326239 Msa1285380:intron 5.0%
TGGAGTGACACAAACTGCGA+TGG - chr8_3:29325354-29325373 Msa1285380:three_prime_UTR 50.0%
AGTGACACAAACTGCGATGG+CGG - chr8_3:29325357-29325376 Msa1285380:three_prime_UTR 50.0%
ACAACGCCGATGTCATCGAT+AGG - chr8_3:29325395-29325414 Msa1285380:three_prime_UTR 50.0%
ATGTGGCATAGGAGTGAGTC+TGG + chr8_3:29325433-29325452 None:intergenic 50.0%
!! TGACGGAGGTTTTGGTAGGA+AGG + chr8_3:29325465-29325484 None:intergenic 50.0%
!! GTCATGACGGAGGTTTTGGT+AGG + chr8_3:29325469-29325488 None:intergenic 50.0%
CGTTTAGATGCTCCCAAAGG+TGG + chr8_3:29325519-29325538 None:intergenic 50.0%
GAATGTGGCGAGATTTACGG+AGG + chr8_3:29325630-29325649 None:intergenic 50.0%
CCGGAGAATGTGTCTACATG+TGG - chr8_3:29325695-29325714 Msa1285380:intron 50.0%
ATCTTGAAGGTGGGGTCCAA+TGG + chr8_3:29325731-29325750 None:intergenic 50.0%
GTGCAATTCAAGAGGGAAGG+AGG + chr8_3:29325802-29325821 None:intergenic 50.0%
!! GTTGGACTGGTGGTTGGTTT+GGG - chr8_3:29326069-29326088 Msa1285380:intron 50.0%
!! TGGTGGTTGGTTTGGGATGT+TGG - chr8_3:29326076-29326095 Msa1285380:intron 50.0%
CCACCGAAATTGGCAGTAGA+GGG + chr8_3:29326126-29326145 None:intergenic 50.0%
CCTCTACTGCCAATTTCGGT+GGG - chr8_3:29326124-29326143 Msa1285380:intron 50.0%
ATGGACTTGCCCACCGAAAT+TGG + chr8_3:29326136-29326155 None:intergenic 50.0%
AAATGGGGCACACAAGTGTG+CGG - chr8_3:29326177-29326196 Msa1285380:intron 50.0%
GGGGATTAAGGGTTAGGGTT+TGG - chr8_3:29326377-29326396 Msa1285380:intron 50.0%
! GTTGGTCTGCAGATTAGGTG+TGG - chr8_3:29326519-29326538 Msa1285380:intron 50.0%
TGCAGATTAGGTGTGGTCCT+TGG - chr8_3:29326526-29326545 Msa1285380:intron 50.0%
ATTAGGTGTGGTCCTTGGTC+CGG - chr8_3:29326531-29326550 Msa1285380:intron 50.0%
TTCAACCTCTTGGCAGAAGG+TGG + chr8_3:29327130-29327149 None:intergenic 50.0%
GTCGCCAATGATGCCAAATG+TGG + chr8_3:29327239-29327258 None:intergenic 50.0%
CTCGGAGGTAGTTGAGCATA+GGG + chr8_3:29327324-29327343 None:intergenic 50.0%
TCTCGGAGGTAGTTGAGCAT+AGG + chr8_3:29327325-29327344 None:intergenic 50.0%
CTCAACTACCTCCGAGATCT+AGG - chr8_3:29327328-29327347 Msa1285380:intron 50.0%
AACTACCTCCGAGATCTAGG+TGG - chr8_3:29327331-29327350 Msa1285380:intron 50.0%
AATCACCACCTAGATCTCGG+AGG + chr8_3:29327339-29327358 None:intergenic 50.0%
! TCGGAGGATGAGGAGAGTAT+GGG + chr8_3:29328295-29328314 None:intergenic 50.0%
ATCGGAGGATGAGGAGAGTA+TGG + chr8_3:29328296-29328315 None:intergenic 50.0%
ACAAAAGGAGGGAGGAGGAA+GGG + chr8_3:29329280-29329299 None:intergenic 50.0%
AACAAAAGGAGGGAGGAGGA+AGG + chr8_3:29329281-29329300 None:intergenic 50.0%
! AGGACATGGCTAACTGGCTT+TGG - chr8_3:29330110-29330129 Msa1285380:CDS 50.0%
!! ACATGGCTAACTGGCTTTGG+AGG - chr8_3:29330113-29330132 Msa1285380:CDS 50.0%
!! GGTCGTCATGACGGAGGTTT+TGG + chr8_3:29325473-29325492 None:intergenic 55.0%
CGACCAGTCTCATTTCTCGC+CGG - chr8_3:29325488-29325507 Msa1285380:three_prime_UTR 55.0%
ACGAGTCCAACTGCAACTGC+AGG - chr8_3:29325554-29325573 Msa1285380:three_prime_UTR 55.0%
GGGATTCCTGCAGTTGCAGT+TGG + chr8_3:29325563-29325582 None:intergenic 55.0%
! GTAAACATCGGAGGTGCAGC+AGG + chr8_3:29325668-29325687 None:intergenic 55.0%
GCACCAATCTCGTTTCCCTC+AGG - chr8_3:29325818-29325837 Msa1285380:intron 55.0%
! ACACCCATTTGGGGTTGGAC+TGG - chr8_3:29326056-29326075 Msa1285380:intron 55.0%
CCACCAGTCCAACCCCAAAT+GGG + chr8_3:29326062-29326081 None:intergenic 55.0%
ACCACCAGTCCAACCCCAAA+TGG + chr8_3:29326063-29326082 None:intergenic 55.0%
!! TTTGGGGTTGGACTGGTGGT+TGG - chr8_3:29326063-29326082 Msa1285380:intron 55.0%
!! GGTTGGACTGGTGGTTGGTT+TGG - chr8_3:29326068-29326087 Msa1285380:intron 55.0%
CCCTCTACTGCCAATTTCGG+TGG - chr8_3:29326123-29326142 Msa1285380:intron 55.0%
CCCACCGAAATTGGCAGTAG+AGG + chr8_3:29326127-29326146 None:intergenic 55.0%
ACACAAGTGTGCGGTGGGAT+TGG - chr8_3:29326186-29326205 Msa1285380:intron 55.0%
AGAAGGTGGAACGGGAACTC+TGG + chr8_3:29327116-29327135 None:intergenic 55.0%
CTCTTGGCAGAAGGTGGAAC+GGG + chr8_3:29327124-29327143 None:intergenic 55.0%
CCTCTTGGCAGAAGGTGGAA+CGG + chr8_3:29327125-29327144 None:intergenic 55.0%
! GGGCTTGGTATAGAGTACGG+TGG - chr8_3:29327199-29327218 Msa1285380:intron 55.0%
CATTGGCGACTTGCAGAGCA+TGG - chr8_3:29327249-29327268 Msa1285380:intron 55.0%
! GAGACTGGTCGTCATGACGG+AGG + chr8_3:29325479-29325498 None:intergenic 60.0%
CCACCGGCGAGAAATGAGAC+TGG + chr8_3:29325494-29325513 None:intergenic 60.0%
CCAGTCTCATTTCTCGCCGG+TGG - chr8_3:29325491-29325510 Msa1285380:three_prime_UTR 60.0%
ATGTGGGTCCGTGCTGCCAT+TGG - chr8_3:29325712-29325731 Msa1285380:intron 60.0%
! CCCATTTGGGGTTGGACTGG+TGG - chr8_3:29326059-29326078 Msa1285380:intron 60.0%
CCGTTCCACCTTCTGCCAAG+AGG - chr8_3:29327122-29327141 Msa1285380:intron 60.0%
TGGCGACTTGCAGAGCATGG+AGG - chr8_3:29327252-29327271 Msa1285380:intron 60.0%
TGGCATGTGACAGAGCCCCT+TGG + chr8_3:29327992-29328011 None:intergenic 60.0%
GGTGGGGTCCAATGGCAGCA+CGG + chr8_3:29325723-29325742 None:intergenic 65.0%
TGGGGCACACAAGTGTGCGG+TGG - chr8_3:29326180-29326199 Msa1285380:intron 65.0%
GGGGCACACAAGTGTGCGGT+GGG - chr8_3:29326181-29326200 Msa1285380:intron 65.0%
AGGAGGGAGGAGGAAGGGAG+CGG + chr8_3:29329275-29329294 None:intergenic 65.0%
TCGCCGGTGGCGCCACCTTT+GGG - chr8_3:29325504-29325523 Msa1285380:three_prime_UTR 70.0%
GCTCCCAAAGGTGGCGCCAC+CGG + chr8_3:29325510-29325529 None:intergenic 70.0%
CTCGCCGGTGGCGCCACCTT+TGG - chr8_3:29325503-29325522 Msa1285380:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 29325337 29330347 29325337 ID=Msa1285380;Name=Msa1285380
chr8_3 mRNA 29325337 29330347 29325337 ID=Msa1285380-mRNA-1;Parent=Msa1285380;Name=Msa1285380-mRNA-1;_AED=0.07;_eAED=0.07;_QI=36|1|1|1|0.75|0.8|5|378|462
chr8_3 exon 29325337 29325713 29325337 ID=Msa1285380-mRNA-1:exon:9792;Parent=Msa1285380-mRNA-1
chr8_3 exon 29327641 29327929 29327641 ID=Msa1285380-mRNA-1:exon:9791;Parent=Msa1285380-mRNA-1
chr8_3 exon 29328052 29328201 29328052 ID=Msa1285380-mRNA-1:exon:9790;Parent=Msa1285380-mRNA-1
chr8_3 exon 29328294 29328777 29328294 ID=Msa1285380-mRNA-1:exon:9789;Parent=Msa1285380-mRNA-1
chr8_3 exon 29329845 29330347 29329845 ID=Msa1285380-mRNA-1:exon:9788;Parent=Msa1285380-mRNA-1
chr8_3 five_prime_UTR 29330312 29330347 29330312 ID=Msa1285380-mRNA-1:five_prime_utr;Parent=Msa1285380-mRNA-1
chr8_3 CDS 29329845 29330311 29329845 ID=Msa1285380-mRNA-1:cds;Parent=Msa1285380-mRNA-1
chr8_3 CDS 29328294 29328777 29328294 ID=Msa1285380-mRNA-1:cds;Parent=Msa1285380-mRNA-1
chr8_3 CDS 29328052 29328201 29328052 ID=Msa1285380-mRNA-1:cds;Parent=Msa1285380-mRNA-1
chr8_3 CDS 29327642 29327929 29327642 ID=Msa1285380-mRNA-1:cds;Parent=Msa1285380-mRNA-1
chr8_3 three_prime_UTR 29327641 29327641 29327641 ID=Msa1285380-mRNA-1:three_prime_utr;Parent=Msa1285380-mRNA-1
chr8_3 three_prime_UTR 29325337 29325713 29325337 ID=Msa1285380-mRNA-1:three_prime_utr;Parent=Msa1285380-mRNA-1
Gene Sequence

>Msa1285380

ATGGCGGAAGAAGAAGAAGAAAACAACGCCGATGTCATCGATAGGATGAGTAGTTTACCAGACTCACTCCTATGCCACATCCTATCATTCCTTCCTACCAAAACCTCCGTCATGACGACCAGTCTCATTTCTCGCCGGTGGCGCCACCTTTGGGAGCATCTAAACGTCTTCGTCTTCGACGACGAGTCCAACTGCAACTGCAGGAATCCCAAAAAGTTCAGAAAGTTTGCATTTTTCGTGAGCTCTGTGTTATCCCTCCGTAAATCTCGCCACATTCGAAAATTTCATCTCACCTGCTGCACCTCCGATGTTTACAGTTTTCCCGGAGAATGTGTCTACATGTGGGTCCGTGCTGCCATTGGACCCCACCTTCAAGATTTGTCTCTCAATATTACAAACTGCCATGGTGATGATATGGTTTATCTCCCTCCTTCCCTCTTGAATTGCACCAATCTCGTTTCCCTCAGTCTTTTTGGTTTGATCCATTTAAAATTTCAACATTCTGCGATTCATTTTCCATCATTAAAGATGTTGAAAGTCGAATTCAGCATATTGGAACACAACATTGACATTGAGGATTTCGGCAAACACCTTACGGATTCAATACTTGTCTTTCTCTCTGGCTGCCCCGTACTCGAAACTCTAGATACCTACTTTTCTCCCTATTTCTTGACCAGAGTTCCCGTTCCACCTTCTGCCAAGAGGTTGAAATTAACTGATGTGAAATTCTCATGGACATGCCTTGAAATAGATTCTGATGGGCTTGGTATAGAGTACGGTGGTTGCAACATCAAACCCACATTTGGCATCATTGGCGACTTGCAGAGCATGGAGGAAGCATATCTTGATTTTTTTTCCTTGCGTGAAAGTGAATTTATCGACCCTATGCTCAACTACCTCCGAGATCTAGGTGGTGATTTACATCTACTTCTGCGTCATTCGACATCAAAGAAGCCGCTTCGCACCTCCATTCTAAATTATCCAGAATTTTGCAATTTGCATCATCTAAAGTTCATTATTCCCTGCTTCAACACGAATCTTCTGCTCAACGTGCTTGAGAAATGTCATATGCTTAAAGTTCTCATAATTCAGAGTAGCAAGGATGAACTGTCACCTTCAAGAACATGGGAGCCAAAGTCAACAACAGTTCCTAAATGTCTTGAATCCCACCTGACCTATATTCATATAGAAGGATATCAAGGATTTGAAGATGAGCTGGCATTTGCTGAATATATTTTGCGTAACGGAATTGTTTTACACACAATGCTCATTTTTTTCGATACTTCAATGGACCTAACAAACAAGAACTGTTCTATCAAAAGATTAACTGATATACCAAGGGGCTCTGTCACATGCCAACTTAAATTTGACTCAGCTGTGTCTCTATAA
Protein sequence

>Msa1285380

MAEEEEENNADVIDRMSSLPDSLLCHILSFLPTKTSVMTTSLISRRWRHLWEHLNVFVFDDESNCNCRNPKKFRKFAFFVSSVLSLRKSRHIRKFHLTCCTSDVYSFPGECVYMWVRAAIGPHLQDLSLNITNCHGDDMVYLPPSLLNCTNLVSLSLFGLIHLKFQHSAIHFPSLKMLKVEFSILEHNIDIEDFGKHLTDSILVFLSGCPVLETLDTYFSPYFLTRVPVPPSAKRLKLTDVKFSWTCLEIDSDGLGIEYGGCNIKPTFGIIGDLQSMEEAYLDFFSLRESEFIDPMLNYLRDLGGDLHLLLRHSTSKKPLRTSILNYPEFCNLHHLKFIIPCFNTNLLLNVLEKCHMLKVLIIQSSKDELSPSRTWEPKSTTVPKCLESHLTYIHIEGYQGFEDELAFAEYILRNGIVLHTMLIFFDTSMDLTNKNCSIKRLTDIPRGSVTCQLKFDSAVSL*