Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246580 | XP_039686237.1 | 88.722 | 133 | 8 | 1 | 36 | 161 | 96 | 228 | 1.64e-79 | 249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246580 | sp|Q9SZL8|FRS5_ARATH | 28.659 | 164 | 92 | 5 | 53 | 198 | 112 | 268 | 3.65e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246580 | A0A396J342 | 77.586 | 58 | 13 | 0 | 158 | 215 | 494 | 551 | 9.39e-19 | 95.5 |
| Msa1246580 | A0A396J342 | 87.218 | 133 | 10 | 1 | 36 | 161 | 96 | 228 | 6.06e-73 | 247 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1246580 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0634670 | Msa1246580 | 0.977516 | 6.151118e-144 | -8.615850e-47 |
| Msa0534800 | Msa1246580 | 0.914968 | 1.027485e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246580 | MtrunA17_Chr2g0287651 | 87.218 | 133 | 10 | 1 | 36 | 161 | 96 | 228 | 1.17e-76 | 247 |
| Msa1246580 | MtrunA17_Chr2g0287651 | 77.586 | 58 | 13 | 0 | 158 | 215 | 494 | 551 | 1.81e-22 | 95.5 |
| Msa1246580 | MtrunA17_Chr1g0203051 | 34.615 | 130 | 78 | 1 | 39 | 161 | 103 | 232 | 1.64e-22 | 95.5 |
| Msa1246580 | MtrunA17_Chr3g0082121 | 34.091 | 132 | 75 | 4 | 39 | 161 | 67 | 195 | 3.86e-14 | 71.2 |
| Msa1246580 | MtrunA17_Chr5g0448761 | 32.479 | 117 | 71 | 2 | 53 | 161 | 99 | 215 | 9.62e-12 | 64.3 |
| Msa1246580 | MtrunA17_Chr8g0389811 | 37.363 | 91 | 50 | 1 | 37 | 120 | 106 | 196 | 7.09e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1246580 | AT4G38180.1 | 28.659 | 164 | 92 | 5 | 53 | 198 | 112 | 268 | 3.71e-12 | 65.9 |
Find 55 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTCATCAAAATAAT+TGG | 0.167098 | 8_2:-38231002 | Msa1246580:five_prime_UTR |
| TGTACGTTACAAAGCCAAAA+AGG | 0.274297 | 8_2:-38229489 | Msa1246580:CDS |
| AATCAGAACCTGTCATATAA+TGG | 0.299188 | 8_2:-38229330 | Msa1246580:CDS |
| GAGAGAGACGCAAGTGAAAT+TGG | 0.300523 | 8_2:+38230975 | None:intergenic |
| CTGTCATATAATGGGATATA+TGG | 0.309391 | 8_2:-38229321 | Msa1246580:CDS |
| GCCTTGCTTCACAATTTGTT+CGG | 0.318117 | 8_2:+38229516 | None:intergenic |
| CGGAGTGAAGATGGCGCTGC+TGG | 0.341163 | 8_2:+38230834 | None:intergenic |
| CCATTAGGAAAGGTGATGTT+AGG | 0.342221 | 8_2:-38229652 | Msa1246580:CDS |
| CCTTGCTTCACAATTTGTTC+GGG | 0.360091 | 8_2:+38229517 | None:intergenic |
| ATTTAGGTGGGGTTAATTCA+TGG | 0.368536 | 8_2:+38229429 | None:intergenic |
| TGGGTCGCATGTGGTGGTGG+TGG | 0.382507 | 8_2:+38230904 | None:intergenic |
| ATCAGAACCTGTCATATAAT+GGG | 0.403538 | 8_2:-38229329 | Msa1246580:CDS |
| GAGACATGAAGCACTTATCT+AGG | 0.412910 | 8_2:-38229571 | Msa1246580:CDS |
| TCGCATGTGGTGGTGGTGGA+AGG | 0.422546 | 8_2:+38230908 | None:intergenic |
| GGGTGCAAGTGTGTAAATTT+AGG | 0.429032 | 8_2:+38229413 | None:intergenic |
| GAGTGGGTCGCATGTGGTGG+TGG | 0.438262 | 8_2:+38230901 | None:intergenic |
| GATCTCTGCTGTGTAAATCT+TGG | 0.442124 | 8_2:+38228362 | None:intergenic |
| CCTAACATCACCTTTCCTAA+TGG | 0.442699 | 8_2:+38229652 | None:intergenic |
| AGGCTTGGAGAGCGAGGTGG+TGG | 0.470187 | 8_2:+38230810 | None:intergenic |
| AAAGATGAAATTATTGAGGC+TGG | 0.470276 | 8_2:-38228327 | Msa1246580:CDS |
| GGGATATATGGTTGCTCAGA+AGG | 0.480775 | 8_2:-38229309 | Msa1246580:CDS |
| TGGCGCTGCTGGGTCGCACG+TGG | 0.486275 | 8_2:+38230845 | None:intergenic |
| GCAAGTGTGTAAATTTAGGT+GGG | 0.497265 | 8_2:+38229417 | None:intergenic |
| ACGGAGTGGGTCGCATGTGG+TGG | 0.498003 | 8_2:+38230898 | None:intergenic |
| GGTGGTGGACGGAGTGAAGA+TGG | 0.501161 | 8_2:+38230825 | None:intergenic |
| CACCTCGCTCTCCAAGCCTC+AGG | 0.510859 | 8_2:-38230806 | Msa1246580:intron |
| GAAAGAAGAGGCAACGGAGT+GGG | 0.522053 | 8_2:+38230885 | None:intergenic |
| CATATATCCCATTATATGAC+AGG | 0.525157 | 8_2:+38229322 | None:intergenic |
| AGTTAAAGATGAAATTATTG+AGG | 0.530146 | 8_2:-38228331 | Msa1246580:CDS |
| CATGTGGTGGTGGTGGAAGG+TGG | 0.533257 | 8_2:+38230911 | None:intergenic |
| CTTGATGCTCTTCAATCACA+TGG | 0.535182 | 8_2:-38229353 | Msa1246580:CDS |
| TGCAAGTGTGTAAATTTAGG+TGG | 0.535511 | 8_2:+38229416 | None:intergenic |
| GTGATTGAAGAGCATCAAGT+TGG | 0.536251 | 8_2:+38229357 | None:intergenic |
| TGATTGAAGAGCATCAAGTT+GGG | 0.536427 | 8_2:+38229358 | None:intergenic |
| TATCGTTATGGAAGATGCAA+AGG | 0.541216 | 8_2:-38229680 | Msa1246580:intron |
| GAGAGAGAAAGAAGAGGCAA+CGG | 0.543213 | 8_2:+38230879 | None:intergenic |
| GGAGTGAAGATGGCGCTGCT+GGG | 0.543895 | 8_2:+38230835 | None:intergenic |
| AGAAAGAAGAGGCAACGGAG+TGG | 0.548447 | 8_2:+38230884 | None:intergenic |
| TTGGAGAGCGAGGTGGTGGA+CGG | 0.559403 | 8_2:+38230814 | None:intergenic |
| TAGAAAACGAACCTGAGGCT+TGG | 0.561009 | 8_2:+38230795 | None:intergenic |
| GGCGCTGCTGGGTCGCACGT+GGG | 0.568721 | 8_2:+38230846 | None:intergenic |
| GAGTTTGTGTGCAACAAGCA+AGG | 0.575972 | 8_2:-38229599 | Msa1246580:CDS |
| AGAGAATGTACTGAGAAGTG+TGG | 0.578536 | 8_2:+38230948 | None:intergenic |
| CCCGAACAAATTGTGAAGCA+AGG | 0.587968 | 8_2:-38229517 | Msa1246580:CDS |
| GGATATATGGTTGCTCAGAA+GGG | 0.589834 | 8_2:-38229308 | Msa1246580:CDS |
| GCAACGGAGTGGGTCGCATG+TGG | 0.594036 | 8_2:+38230895 | None:intergenic |
| GATGTTAGGAGCAATAGTAG+TGG | 0.605946 | 8_2:-38229638 | Msa1246580:CDS |
| CAAGTGTGTAAATTTAGGTG+GGG | 0.607267 | 8_2:+38229418 | None:intergenic |
| TATATGGTTGCTCAGAAGGG+TGG | 0.613989 | 8_2:-38229305 | Msa1246580:CDS |
| CGCAGGTGAGTCGTCAACAC+AGG | 0.614146 | 8_2:+38228405 | None:intergenic |
| AACCTGAGGCTTGGAGAGCG+AGG | 0.625854 | 8_2:+38230804 | None:intergenic |
| GCACACGAGAGAGAAAGAAG+AGG | 0.627682 | 8_2:+38230873 | None:intergenic |
| GCTAAGAGTAAAATTAACAA+TGG | 0.635774 | 8_2:-38225602 | Msa1246580:CDS |
| CATCACTCTCAATCGAACGC+AGG | 0.676080 | 8_2:+38228388 | None:intergenic |
| CTGAGGCTTGGAGAGCGAGG+TGG | 0.685584 | 8_2:+38230807 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTTTCGAAATTTTA+GGG | - | chr8_2:38226610-38226629 | Msa1246580:intron | 10.0% |
| !!! | TTGTAAAATTTTGATAATAA+GGG | - | chr8_2:38229835-38229854 | Msa1246580:intron | 10.0% |
| !! | TAGAAAATATCAAATTATAA+AGG | - | chr8_2:38230100-38230119 | Msa1246580:intron | 10.0% |
| !! | AGAAAATATCAAATTATAAA+GGG | - | chr8_2:38230101-38230120 | Msa1246580:intron | 10.0% |
| !! | ATATACATATTATGAATATT+TGG | - | chr8_2:38230569-38230588 | Msa1246580:intron | 10.0% |
| !! | GAAAAAAAAAATTAAATACA+TGG | + | chr8_2:38230945-38230964 | None:intergenic | 10.0% |
| !!! | GTTTAAATTTTCGAAATTTT+AGG | - | chr8_2:38226609-38226628 | Msa1246580:intron | 15.0% |
| !!! | TATGAATTTTATTATCGTTA+TGG | - | chr8_2:38226899-38226918 | Msa1246580:intron | 15.0% |
| !!! | AAATACTTTTATGGATATTT+CGG | - | chr8_2:38229755-38229774 | Msa1246580:intron | 15.0% |
| !!! | CTTGTAAAATTTTGATAATA+AGG | - | chr8_2:38229834-38229853 | Msa1246580:intron | 15.0% |
| !! | TTATTATTATTGCATTTCAT+GGG | - | chr8_2:38230034-38230053 | Msa1246580:intron | 15.0% |
| !!! | TTTCCTTAAAAAACTATTTT+AGG | - | chr8_2:38230637-38230656 | Msa1246580:intron | 15.0% |
| !!! | TTCCTTAAAAAACTATTTTA+GGG | - | chr8_2:38230638-38230657 | Msa1246580:intron | 15.0% |
| !!! | CAGATATTTAAAATTAACAA+CGG | - | chr8_2:38230918-38230937 | Msa1246580:five_prime_UTR | 15.0% |
| !! | TTCTTCTTCATCAAAATAAT+TGG | - | chr8_2:38225589-38225608 | Msa1246580:CDS | 20.0% |
| !!! | TCTCCTTTTTCTTTTTAATT+AGG | - | chr8_2:38225849-38225868 | Msa1246580:intron | 20.0% |
| !!! | CTCCTTTTTCTTTTTAATTA+GGG | - | chr8_2:38225850-38225869 | Msa1246580:intron | 20.0% |
| !! | AACCCTAATTAAAAAGAAAA+AGG | + | chr8_2:38225855-38225874 | None:intergenic | 20.0% |
| !!! | TAATTAGGGTTTTTTGATTT+TGG | - | chr8_2:38225864-38225883 | Msa1246580:intron | 20.0% |
| !! | TGAATGTAATAGTGTTTAAT+TGG | - | chr8_2:38225898-38225917 | Msa1246580:intron | 20.0% |
| !!! | CAATTGGAGATTATTTTTTT+GGG | - | chr8_2:38226020-38226039 | Msa1246580:intron | 20.0% |
| !!! | AATTGGAGATTATTTTTTTG+GGG | - | chr8_2:38226021-38226040 | Msa1246580:intron | 20.0% |
| !! | ACTAGGTTATAACAAAAAAA+AGG | - | chr8_2:38226243-38226262 | Msa1246580:intron | 20.0% |
| !! | GTTATATACTTGTTTAGTAT+TGG | - | chr8_2:38226277-38226296 | Msa1246580:intron | 20.0% |
| !!! | TTTTGCTTGCAATAATATAT+TGG | - | chr8_2:38226455-38226474 | Msa1246580:intron | 20.0% |
| !! | GAAATTCTTAAACTTGAATT+TGG | - | chr8_2:38226860-38226879 | Msa1246580:intron | 20.0% |
| !!! | TTTCCATACATTCTAAAAAA+CGG | + | chr8_2:38227690-38227709 | None:intergenic | 20.0% |
| !!! | ATTTATGCATAATTTTGAAC+AGG | - | chr8_2:38228104-38228123 | Msa1246580:intron | 20.0% |
| !! | AGTTAAAGATGAAATTATTG+AGG | - | chr8_2:38228260-38228279 | Msa1246580:intron | 20.0% |
| !! | AAAAAAGAATGGTGTATTTA+GGG | - | chr8_2:38228644-38228663 | Msa1246580:intron | 20.0% |
| !! | AAAAATAAAAGGAAACCTAA+TGG | - | chr8_2:38229140-38229159 | Msa1246580:intron | 20.0% |
| !!! | GGAATTCTAAAATATTATGT+TGG | - | chr8_2:38229508-38229527 | Msa1246580:CDS | 20.0% |
| !!! | ATTTTATTATGATGACACAA+AGG | - | chr8_2:38229552-38229571 | Msa1246580:CDS | 20.0% |
| !! | CTTATTATTATTGCATTTCA+TGG | - | chr8_2:38230033-38230052 | Msa1246580:intron | 20.0% |
| !! | AGTATTTATAAGATAACTGT+GGG | + | chr8_2:38230252-38230271 | None:intergenic | 20.0% |
| !! | TAGTATTTATAAGATAACTG+TGG | + | chr8_2:38230253-38230272 | None:intergenic | 20.0% |
| !! | AATAGACACTAATTGTAATT+TGG | + | chr8_2:38230495-38230514 | None:intergenic | 20.0% |
| !!! | AACCCTAAAATAGTTTTTTA+AGG | + | chr8_2:38230643-38230662 | None:intergenic | 20.0% |
| !!! | AAAAACTATTTTAGGGTTTA+AGG | - | chr8_2:38230645-38230664 | Msa1246580:intron | 20.0% |
| !! | AAAAAAAAACTAACTGCTTT+AGG | - | chr8_2:38230693-38230712 | Msa1246580:intron | 20.0% |
| !! | AAAAAAAACTAACTGCTTTA+GGG | - | chr8_2:38230694-38230713 | Msa1246580:intron | 20.0% |
| !!! | ATAGTAGTTAGTTTTTTGTT+AGG | + | chr8_2:38230747-38230766 | None:intergenic | 20.0% |
| ! | TGGTTGATTGATTATGAAAT+TGG | - | chr8_2:38225918-38225937 | Msa1246580:intron | 25.0% |
| ! | ATTATGAAATTGGCATTATG+AGG | - | chr8_2:38225928-38225947 | Msa1246580:intron | 25.0% |
| !! | AATCACAAAATCGCAAATTT+TGG | + | chr8_2:38225997-38226016 | None:intergenic | 25.0% |
| !!! | GCAATTGGAGATTATTTTTT+TGG | - | chr8_2:38226019-38226038 | Msa1246580:intron | 25.0% |
| !! | ATATACTTGTTTAGTATTGG+AGG | - | chr8_2:38226280-38226299 | Msa1246580:intron | 25.0% |
| !! | TGCCATTTATATGTACATTT+GGG | - | chr8_2:38226360-38226379 | Msa1246580:intron | 25.0% |
| ! | AAGTTTAAGAATTTCATCAG+AGG | + | chr8_2:38226855-38226874 | None:intergenic | 25.0% |
| !! | AAGAATGAAAAGTCTGTTTT+GGG | - | chr8_2:38227474-38227493 | Msa1246580:intron | 25.0% |
| !!! | AGGTCTGATTATTTTTGTTT+TGG | - | chr8_2:38227511-38227530 | Msa1246580:intron | 25.0% |
| !! | AATGTACTCAAATTTTACAC+CGG | - | chr8_2:38227873-38227892 | Msa1246580:intron | 25.0% |
| ! | ATGAACTTGAAGAAAATGAT+TGG | - | chr8_2:38227935-38227954 | Msa1246580:intron | 25.0% |
| ! | TGAACTTGAAGAAAATGATT+GGG | - | chr8_2:38227936-38227955 | Msa1246580:intron | 25.0% |
| ! | TATTTACGTGATAAGTTCTT+TGG | - | chr8_2:38228000-38228019 | Msa1246580:intron | 25.0% |
| ! | ACAAAAAAAACATGACAACA+TGG | + | chr8_2:38228444-38228463 | None:intergenic | 25.0% |
| !!! | TCATGTTTTTTTTGTGATGA+AGG | - | chr8_2:38228449-38228468 | Msa1246580:CDS | 25.0% |
| !!! | AAATACACCATTCTTTTTTG+AGG | + | chr8_2:38228643-38228662 | None:intergenic | 25.0% |
| ! | CAAAAAAGAATGGTGTATTT+AGG | - | chr8_2:38228643-38228662 | Msa1246580:intron | 25.0% |
| !! | ATAAGCAAGTTAATTTTTGC+AGG | - | chr8_2:38228958-38228977 | Msa1246580:intron | 25.0% |
| ! | TTCTTTAAGCCAAAAAGAAA+AGG | - | chr8_2:38229039-38229058 | Msa1246580:intron | 25.0% |
| !! | ACAAACATACCTTTTCTTTT+TGG | + | chr8_2:38229051-38229070 | None:intergenic | 25.0% |
| ! | GTCATTCACAGAAAAATAAA+AGG | - | chr8_2:38229129-38229148 | Msa1246580:intron | 25.0% |
| ! | CAAGCAAAAGAAATATAAAG+AGG | - | chr8_2:38229178-38229197 | Msa1246580:intron | 25.0% |
| !!! | AAGGCTTTGATTTTGTTTAT+AGG | - | chr8_2:38229571-38229590 | Msa1246580:CDS | 25.0% |
| ! | AATTTCTTGTATGTTTCACT+TGG | - | chr8_2:38229625-38229644 | Msa1246580:CDS | 25.0% |
| !! | TGTGGTTCAAAATACTTTTA+TGG | - | chr8_2:38229746-38229765 | Msa1246580:intron | 25.0% |
| !!! | TTTTAAGAAGAATAAGAACG+TGG | - | chr8_2:38229936-38229955 | Msa1246580:intron | 25.0% |
| ! | TTTAAGAAGAATAAGAACGT+GGG | - | chr8_2:38229937-38229956 | Msa1246580:intron | 25.0% |
| ! | ATTGTATAAACTGTATCATG+AGG | + | chr8_2:38230007-38230026 | None:intergenic | 25.0% |
| ! | AACACTTACAGATTTACAAA+GGG | - | chr8_2:38230057-38230076 | Msa1246580:intron | 25.0% |
| ! | TTGTCAAAAAATATATCCAG+TGG | - | chr8_2:38230211-38230230 | Msa1246580:intron | 25.0% |
| ! | ACAAAAAACTAACTACTATC+AGG | - | chr8_2:38230748-38230767 | Msa1246580:intron | 25.0% |
| ! | CAAAAAACTAACTACTATCA+GGG | - | chr8_2:38230749-38230768 | Msa1246580:intron | 25.0% |
| ! | GCTAAGAGTAAAATTAACAA+TGG | - | chr8_2:38230989-38231008 | Msa1246580:five_prime_UTR | 25.0% |
| ! | CGATTTTGTGATTATGCAAT+TGG | - | chr8_2:38226004-38226023 | Msa1246580:intron | 30.0% |
| CACCAAATTAGTACCAATTT+CGG | + | chr8_2:38226048-38226067 | None:intergenic | 30.0% | |
| TTGTTGATATGAATCTGTTG+AGG | - | chr8_2:38226074-38226093 | Msa1246580:intron | 30.0% | |
| TGTTGATATGAATCTGTTGA+GGG | - | chr8_2:38226075-38226094 | Msa1246580:intron | 30.0% | |
| TTGGTTCATTGTGTAATTCA+AGG | - | chr8_2:38226141-38226160 | Msa1246580:intron | 30.0% | |
| TAGTTATTAAAGCAGACACT+AGG | - | chr8_2:38226226-38226245 | Msa1246580:intron | 30.0% | |
| ! | CTGCCATTTATATGTACATT+TGG | - | chr8_2:38226359-38226378 | Msa1246580:intron | 30.0% |
| CACCCAAATGTACATATAAA+TGG | + | chr8_2:38226365-38226384 | None:intergenic | 30.0% | |
| CATTTATATGTACATTTGGG+TGG | - | chr8_2:38226363-38226382 | Msa1246580:intron | 30.0% | |
| AAGACGTAGATTTCATAGTT+TGG | + | chr8_2:38226523-38226542 | None:intergenic | 30.0% | |
| TCAATCAACAATGCATTAGT+AGG | - | chr8_2:38226800-38226819 | Msa1246580:intron | 30.0% | |
| TGTAGTGTCTAAATTTGAAG+AGG | - | chr8_2:38227132-38227151 | Msa1246580:intron | 30.0% | |
| GTAGTGTCTAAATTTGAAGA+GGG | - | chr8_2:38227133-38227152 | Msa1246580:intron | 30.0% | |
| TAGTGTCTAAATTTGAAGAG+GGG | - | chr8_2:38227134-38227153 | Msa1246580:intron | 30.0% | |
| AATCAGAACCTGTCATATAA+TGG | - | chr8_2:38227261-38227280 | Msa1246580:intron | 30.0% | |
| ATCAGAACCTGTCATATAAT+GGG | - | chr8_2:38227262-38227281 | Msa1246580:intron | 30.0% | |
| CATATATCCCATTATATGAC+AGG | + | chr8_2:38227272-38227291 | None:intergenic | 30.0% | |
| ! | CTGTCATATAATGGGATATA+TGG | - | chr8_2:38227270-38227289 | Msa1246580:intron | 30.0% |
| TTCAGCATATAACATTGGAT+CGG | + | chr8_2:38227434-38227453 | None:intergenic | 30.0% | |
| TCGTATTCAGCATATAACAT+TGG | + | chr8_2:38227439-38227458 | None:intergenic | 30.0% | |
| ! | GAAGAATGAAAAGTCTGTTT+TGG | - | chr8_2:38227473-38227492 | Msa1246580:intron | 30.0% |
| ! | TATCCGTTGTGTATATTTTC+TGG | - | chr8_2:38227580-38227599 | Msa1246580:intron | 30.0% |
| ! | ATCCGTTGTGTATATTTTCT+GGG | - | chr8_2:38227581-38227600 | Msa1246580:intron | 30.0% |
| CAAATATAATGGTCTGTGAA+TGG | + | chr8_2:38227615-38227634 | None:intergenic | 30.0% | |
| CATTCACAGACCATTATATT+TGG | - | chr8_2:38227613-38227632 | Msa1246580:intron | 30.0% | |
| AAACAATCGAGTCATATAAG+TGG | - | chr8_2:38227656-38227675 | Msa1246580:intron | 30.0% | |
| AACAATCGAGTCATATAAGT+GGG | - | chr8_2:38227657-38227676 | Msa1246580:intron | 30.0% | |
| !!! | GAACCGTTTTTTAGAATGTA+TGG | - | chr8_2:38227684-38227703 | Msa1246580:intron | 30.0% |
| TGTAAAGAAAACACCATTTC+TGG | - | chr8_2:38227834-38227853 | Msa1246580:intron | 30.0% | |
| GAACTTATCACGTAAATATG+CGG | + | chr8_2:38227998-38228017 | None:intergenic | 30.0% | |
| AAAGATGAAATTATTGAGGC+TGG | - | chr8_2:38228264-38228283 | Msa1246580:intron | 30.0% | |
| !!! | TTTTTTTGTGATGAAGGAAG+AGG | - | chr8_2:38228455-38228474 | Msa1246580:CDS | 30.0% |
| TGATCACATACCAAAATGTT+TGG | - | chr8_2:38228482-38228501 | Msa1246580:intron | 30.0% | |
| ATGATTGAAGTTGCTAGATT+TGG | - | chr8_2:38228579-38228598 | Msa1246580:intron | 30.0% | |
| AAAGAAGCCTCAAAAAAGAA+TGG | - | chr8_2:38228633-38228652 | Msa1246580:intron | 30.0% | |
| TGAGAAATTAACAGATGATC+AGG | - | chr8_2:38228731-38228750 | Msa1246580:intron | 30.0% | |
| AAATTAACAGATGATCAGGT+AGG | - | chr8_2:38228735-38228754 | Msa1246580:intron | 30.0% | |
| AGAATTGGTATCTAACTCTA+TGG | - | chr8_2:38229012-38229031 | Msa1246580:intron | 30.0% | |
| AGCACAATTTACAGAGATTT+CGG | - | chr8_2:38229202-38229221 | Msa1246580:intron | 30.0% | |
| ATTTGCATTGGATTAATAGC+AGG | + | chr8_2:38229284-38229303 | None:intergenic | 30.0% | |
| ! | TCTAGTTATTCCCTTTTGAA+TGG | - | chr8_2:38229450-38229469 | Msa1246580:intron | 30.0% |
| CCATCAAATTCCATTCAAAA+GGG | + | chr8_2:38229463-38229482 | None:intergenic | 30.0% | |
| ! | CCTTTTGAATGGAATTTGAT+GGG | - | chr8_2:38229461-38229480 | Msa1246580:intron | 30.0% |
| ATAGGCTATGATCTGATATA+TGG | - | chr8_2:38229589-38229608 | Msa1246580:CDS | 30.0% | |
| AGAAACAAGTATGTTTCACT+TGG | - | chr8_2:38229652-38229671 | Msa1246580:CDS | 30.0% | |
| ! | GTCTATAATGGTGTATTTTG+TGG | - | chr8_2:38229728-38229747 | Msa1246580:intron | 30.0% |
| CTAATTGAAACGGATACAAA+TGG | + | chr8_2:38229801-38229820 | None:intergenic | 30.0% | |
| ATGACAGACACTAATTGAAA+CGG | + | chr8_2:38229811-38229830 | None:intergenic | 30.0% | |
| TGTCTTGTAAAGATAGAGAT+TGG | - | chr8_2:38229882-38229901 | Msa1246580:intron | 30.0% | |
| GAACACTTACAGATTTACAA+AGG | - | chr8_2:38230056-38230075 | Msa1246580:intron | 30.0% | |
| TCAAAAAATATATCCAGTGG+CGG | - | chr8_2:38230214-38230233 | Msa1246580:intron | 30.0% | |
| AAATGAAAATGAGAAGCAGA+GGG | + | chr8_2:38230363-38230382 | None:intergenic | 30.0% | |
| ACACTAATTGTAATTTGGAG+TGG | + | chr8_2:38230490-38230509 | None:intergenic | 30.0% | |
| !!! | CTATTTTAGGGTTTAAGGTT+TGG | - | chr8_2:38230650-38230669 | Msa1246580:intron | 30.0% |
| ATTTAGCGATGAAGATTACT+TGG | + | chr8_2:38230859-38230878 | None:intergenic | 30.0% | |
| AGTGTTGTGAAACCATTGTT+AGG | - | chr8_2:38225959-38225978 | Msa1246580:intron | 35.0% | |
| GTGTTGTGAAACCATTGTTA+GGG | - | chr8_2:38225960-38225979 | Msa1246580:intron | 35.0% | |
| !!! | ATTTTTTTGGGGTCCGAAAT+TGG | - | chr8_2:38226032-38226051 | Msa1246580:intron | 35.0% |
| GTCCGAAATTGGTACTAATT+TGG | - | chr8_2:38226043-38226062 | Msa1246580:intron | 35.0% | |
| !! | CAAAACAATCTGGCTTGTTT+GGG | + | chr8_2:38226124-38226143 | None:intergenic | 35.0% |
| CACAATGAACCAAAACAATC+TGG | + | chr8_2:38226134-38226153 | None:intergenic | 35.0% | |
| AACACAATTGAGCTACTTCA+AGG | - | chr8_2:38226195-38226214 | Msa1246580:intron | 35.0% | |
| TATAAATGGCAGCACACAAA+TGG | + | chr8_2:38226351-38226370 | None:intergenic | 35.0% | |
| TCTTCCTAAGACAAGAAAGA+AGG | + | chr8_2:38226432-38226451 | None:intergenic | 35.0% | |
| TCTTTCTTGTCTTAGGAAGA+TGG | - | chr8_2:38226432-38226451 | Msa1246580:intron | 35.0% | |
| TTTCATAGTTTGGCTAGGTA+TGG | + | chr8_2:38226513-38226532 | None:intergenic | 35.0% | |
| GTAGATTTCATAGTTTGGCT+AGG | + | chr8_2:38226518-38226537 | None:intergenic | 35.0% | |
| !!! | TCGAAATTTTAGGGTTGTCA+TGG | - | chr8_2:38226619-38226638 | Msa1246580:intron | 35.0% |
| GTATTCTACTTCACTGGAAT+CGG | + | chr8_2:38226669-38226688 | None:intergenic | 35.0% | |
| ATCTGTGTATTCTACTTCAC+TGG | + | chr8_2:38226675-38226694 | None:intergenic | 35.0% | |
| TGATGAATCAGTTCAACAAG+AGG | - | chr8_2:38226775-38226794 | Msa1246580:intron | 35.0% | |
| GATGAATCAGTTCAACAAGA+GGG | - | chr8_2:38226776-38226795 | Msa1246580:intron | 35.0% | |
| ACAATGCATTAGTAGGTGAA+AGG | - | chr8_2:38226807-38226826 | Msa1246580:intron | 35.0% | |
| AAGAATTTCATCAGAGGCAA+TGG | + | chr8_2:38226849-38226868 | None:intergenic | 35.0% | |
| TATCGTTATGGAAGATGCAA+AGG | - | chr8_2:38226911-38226930 | Msa1246580:intron | 35.0% | |
| ! | AAAGGTTTTGCCATTAGGAA+AGG | - | chr8_2:38226929-38226948 | Msa1246580:intron | 35.0% |
| TGTACGTTACAAAGCCAAAA+AGG | - | chr8_2:38227102-38227121 | Msa1246580:intron | 35.0% | |
| GTACGTTACAAAGCCAAAAA+GGG | - | chr8_2:38227103-38227122 | Msa1246580:intron | 35.0% | |
| TACGTTACAAAGCCAAAAAG+GGG | - | chr8_2:38227104-38227123 | Msa1246580:intron | 35.0% | |
| ATTTAGGTGGGGTTAATTCA+TGG | + | chr8_2:38227165-38227184 | None:intergenic | 35.0% | |
| CAAGTGTGTAAATTTAGGTG+GGG | + | chr8_2:38227176-38227195 | None:intergenic | 35.0% | |
| GCAAGTGTGTAAATTTAGGT+GGG | + | chr8_2:38227177-38227196 | None:intergenic | 35.0% | |
| TGCAAGTGTGTAAATTTAGG+TGG | + | chr8_2:38227178-38227197 | None:intergenic | 35.0% | |
| ! | CAGAGATTTTACGATACAGT+GGG | + | chr8_2:38227201-38227220 | None:intergenic | 35.0% |
| ! | TCAGAGATTTTACGATACAG+TGG | + | chr8_2:38227202-38227221 | None:intergenic | 35.0% |
| !! | TGATTGAAGAGCATCAAGTT+GGG | + | chr8_2:38227236-38227255 | None:intergenic | 35.0% |
| ATGCGTGAAGTCATTAAAGA+CGG | - | chr8_2:38227364-38227383 | Msa1246580:intron | 35.0% | |
| GAATACGATGTCAACATTGA+TGG | - | chr8_2:38227451-38227470 | Msa1246580:intron | 35.0% | |
| !!! | TTTTTGTTTTGGCGACGTTT+TGG | - | chr8_2:38227522-38227541 | Msa1246580:intron | 35.0% |
| CACCCAGAAAATATACACAA+CGG | + | chr8_2:38227586-38227605 | None:intergenic | 35.0% | |
| ATATAATGGTCTGTGAATGG+TGG | + | chr8_2:38227612-38227631 | None:intergenic | 35.0% | |
| !! | CATCTGTTACAACTGCTTTT+GGG | + | chr8_2:38227720-38227739 | None:intergenic | 35.0% |
| AATGAGGGAAGCTATTAAAC+AGG | - | chr8_2:38227750-38227769 | Msa1246580:intron | 35.0% | |
| ! | AAAGAAAACACCATTTCTGG+AGG | - | chr8_2:38227837-38227856 | Msa1246580:intron | 35.0% |
| ! | AAGAAAACACCATTTCTGGA+GGG | - | chr8_2:38227838-38227857 | Msa1246580:intron | 35.0% |
| ! | TTTTCGCAATGTGTAAACCA+TGG | + | chr8_2:38228328-38228347 | None:intergenic | 35.0% |
| TTGCGAAAATATCGTGAGAA+AGG | - | chr8_2:38228339-38228358 | Msa1246580:CDS | 35.0% | |
| TTTCTGAACAACGATTCCAA+TGG | - | chr8_2:38228540-38228559 | Msa1246580:intron | 35.0% | |
| TTCTGAACAACGATTCCAAT+GGG | - | chr8_2:38228541-38228560 | Msa1246580:intron | 35.0% | |
| TGGTGTATTTAGGGACATAA+TGG | - | chr8_2:38228653-38228672 | Msa1246580:intron | 35.0% | |
| GTGATACTGAATACTCTACT+CGG | - | chr8_2:38228706-38228725 | Msa1246580:intron | 35.0% | |
| GTAGCATTCTTCTTCTTCTT+TGG | + | chr8_2:38228792-38228811 | None:intergenic | 35.0% | |
| ! | TTTTTGCAGGATACACAGAA+CGG | - | chr8_2:38228971-38228990 | Msa1246580:intron | 35.0% |
| ACATGAACATGATGCAGAAT+TGG | - | chr8_2:38228997-38229016 | Msa1246580:intron | 35.0% | |
| CTTGTGCTAACATTACCATT+AGG | + | chr8_2:38229158-38229177 | None:intergenic | 35.0% | |
| TAAATTGGCTGCATTTGCAT+TGG | + | chr8_2:38229296-38229315 | None:intergenic | 35.0% | |
| AGTCCATAATTGGGGTAAAT+TGG | + | chr8_2:38229311-38229330 | None:intergenic | 35.0% | |
| AATCATCAACTTCCTGTTCT+GGG | - | chr8_2:38229342-38229361 | Msa1246580:CDS | 35.0% | |
| ! | TTGGCACAAGTCATGAATTT+TGG | - | chr8_2:38229368-38229387 | Msa1246580:CDS | 35.0% |
| ! | CCCTTTTGAATGGAATTTGA+TGG | - | chr8_2:38229460-38229479 | Msa1246580:intron | 35.0% |
| CCCATCAAATTCCATTCAAA+AGG | + | chr8_2:38229464-38229483 | None:intergenic | 35.0% | |
| TGAATGGAATTTGATGGGAA+TGG | - | chr8_2:38229466-38229485 | Msa1246580:intron | 35.0% | |
| !!! | GGTACACTTGTTATTGGTTT+TGG | - | chr8_2:38229487-38229506 | Msa1246580:CDS | 35.0% |
| ATTATAGACTCCTAAAGCCA+AGG | + | chr8_2:38229717-38229736 | None:intergenic | 35.0% | |
| !! | TTGGCTTTAGGAGTCTATAA+TGG | - | chr8_2:38229716-38229735 | Msa1246580:intron | 35.0% |
| !! | TTCGGTGTTCTGTATATTTG+CGG | - | chr8_2:38229773-38229792 | Msa1246580:intron | 35.0% |
| GAAATGAAAATGAGAAGCAG+AGG | + | chr8_2:38230364-38230383 | None:intergenic | 35.0% | |
| ! | ATTCACAAAAAGCATATGCC+AGG | - | chr8_2:38230420-38230439 | Msa1246580:intron | 35.0% |
| ! | CTAATTGTAATTTGGAGTGG+TGG | + | chr8_2:38230487-38230506 | None:intergenic | 35.0% |
| TAAACCCTAAAATAGTTGGG+GGG | + | chr8_2:38230597-38230616 | None:intergenic | 35.0% | |
| CTAAACCCTAAAATAGTTGG+GGG | + | chr8_2:38230598-38230617 | None:intergenic | 35.0% | |
| CCTAAACCCTAAAATAGTTG+GGG | + | chr8_2:38230599-38230618 | None:intergenic | 35.0% | |
| CCCTAAACCCTAAAATAGTT+GGG | + | chr8_2:38230600-38230619 | None:intergenic | 35.0% | |
| !!! | CCCAACTATTTTAGGGTTTA+GGG | - | chr8_2:38230597-38230616 | Msa1246580:intron | 35.0% |
| ACCCTAAACCCTAAAATAGT+TGG | + | chr8_2:38230601-38230620 | None:intergenic | 35.0% | |
| !!! | GGTTTAAGGTTTGGTTTTAG+AGG | - | chr8_2:38230659-38230678 | Msa1246580:intron | 35.0% |
| ACTAACTACTATCAGGGTTT+AGG | - | chr8_2:38230755-38230774 | Msa1246580:intron | 35.0% | |
| CTAACTACTATCAGGGTTTA+GGG | - | chr8_2:38230756-38230775 | Msa1246580:intron | 35.0% | |
| TTGAATAATGTCCTACAGTG+AGG | + | chr8_2:38230831-38230850 | None:intergenic | 35.0% | |
| AGAGAATGTACTGAGAAGTG+TGG | + | chr8_2:38225646-38225665 | None:intergenic | 40.0% | |
| AGTGTTAGAAAACGAACCTG+AGG | + | chr8_2:38225804-38225823 | None:intergenic | 40.0% | |
| CCACATCAAAACCCTAACAA+TGG | + | chr8_2:38225974-38225993 | None:intergenic | 40.0% | |
| !! | CCATTGTTAGGGTTTTGATG+TGG | - | chr8_2:38225971-38225990 | Msa1246580:intron | 40.0% |
| GATATGAATCTGTTGAGGGT+TGG | - | chr8_2:38226079-38226098 | Msa1246580:intron | 40.0% | |
| !! | CCAAAACAATCTGGCTTGTT+TGG | + | chr8_2:38226125-38226144 | None:intergenic | 40.0% |
| ! | CCAAACAAGCCAGATTGTTT+TGG | - | chr8_2:38226122-38226141 | Msa1246580:intron | 40.0% |
| ATTGGAGGCAACAATTACGT+TGG | - | chr8_2:38226295-38226314 | Msa1246580:intron | 40.0% | |
| ACCCCAGCGTATATGTTATA+GGG | + | chr8_2:38226389-38226408 | None:intergenic | 40.0% | |
| AACCCCAGCGTATATGTTAT+AGG | + | chr8_2:38226390-38226409 | None:intergenic | 40.0% | |
| AGCACCTTCTTTCTTGTCTT+AGG | - | chr8_2:38226425-38226444 | Msa1246580:intron | 40.0% | |
| TGAAATCTACGTCTTGTGCT+AGG | - | chr8_2:38226528-38226547 | Msa1246580:intron | 40.0% | |
| GGAACACCACAAAGATTGTT+TGG | - | chr8_2:38226640-38226659 | Msa1246580:intron | 40.0% | |
| GATGCTGAAGATGATGTTGA+TGG | - | chr8_2:38226731-38226750 | Msa1246580:intron | 40.0% | |
| TGCATTAGTAGGTGAAAGGT+TGG | - | chr8_2:38226811-38226830 | Msa1246580:intron | 40.0% | |
| ! | GATGCAAAGGTTTTGCCATT+AGG | - | chr8_2:38226924-38226943 | Msa1246580:intron | 40.0% |
| CCTAACATCACCTTTCCTAA+TGG | + | chr8_2:38226942-38226961 | None:intergenic | 40.0% | |
| CCATTAGGAAAGGTGATGTT+AGG | - | chr8_2:38226939-38226958 | Msa1246580:intron | 40.0% | |
| GATGTTAGGAGCAATAGTAG+TGG | - | chr8_2:38226953-38226972 | Msa1246580:intron | 40.0% | |
| ! | GAGACATGAAGCACTTATCT+AGG | - | chr8_2:38227020-38227039 | Msa1246580:intron | 40.0% |
| ! | CCTTGCTTCACAATTTGTTC+GGG | + | chr8_2:38227077-38227096 | None:intergenic | 40.0% |
| ! | GCCTTGCTTCACAATTTGTT+CGG | + | chr8_2:38227078-38227097 | None:intergenic | 40.0% |
| ! | CACTACATATCTCCCCTTTT+TGG | + | chr8_2:38227119-38227138 | None:intergenic | 40.0% |
| GGGTGCAAGTGTGTAAATTT+AGG | + | chr8_2:38227181-38227200 | None:intergenic | 40.0% | |
| !! | GTGATTGAAGAGCATCAAGT+TGG | + | chr8_2:38227237-38227256 | None:intergenic | 40.0% |
| CTTGATGCTCTTCAATCACA+TGG | - | chr8_2:38227238-38227257 | Msa1246580:intron | 40.0% | |
| GGATATATGGTTGCTCAGAA+GGG | - | chr8_2:38227283-38227302 | Msa1246580:intron | 40.0% | |
| AGCATATAACATTGGATCGG+TGG | + | chr8_2:38227431-38227450 | None:intergenic | 40.0% | |
| !! | AAAAGTCTGTTTTGGGCTGA+TGG | - | chr8_2:38227481-38227500 | Msa1246580:intron | 40.0% |
| !! | AAAGTCTGTTTTGGGCTGAT+GGG | - | chr8_2:38227482-38227501 | Msa1246580:intron | 40.0% |
| CAACGCAACGCCAAATATAA+TGG | + | chr8_2:38227626-38227645 | None:intergenic | 40.0% | |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr8_2:38227721-38227740 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr8_2:38227718-38227737 | Msa1246580:intron | 40.0% | |
| AGATGGAGATGGATCAATGA+GGG | - | chr8_2:38227735-38227754 | Msa1246580:intron | 40.0% | |
| ATAAGCGATGAGATGCATCA+GGG | + | chr8_2:38227780-38227799 | None:intergenic | 40.0% | |
| TTTCCAAAACCCTCCAGAAA+TGG | + | chr8_2:38227850-38227869 | None:intergenic | 40.0% | |
| ! | TTTTACACCGGAGCAATTTG+AGG | - | chr8_2:38227885-38227904 | Msa1246580:intron | 40.0% |
| CAAAACTCCTCAAATTGCTC+CGG | + | chr8_2:38227895-38227914 | None:intergenic | 40.0% | |
| GATAGCTTCACATTGAGATG+TGG | + | chr8_2:38228037-38228056 | None:intergenic | 40.0% | |
| AAGACATATGTCAGAGCGAA+AGG | - | chr8_2:38228069-38228088 | Msa1246580:intron | 40.0% | |
| GATCTCTGCTGTGTAAATCT+TGG | + | chr8_2:38228232-38228251 | None:intergenic | 40.0% | |
| TCTCAAGAGCAAAGAATGTG+TGG | - | chr8_2:38228296-38228315 | Msa1246580:intron | 40.0% | |
| CTCAAGAGCAAAGAATGTGT+GGG | - | chr8_2:38228297-38228316 | Msa1246580:intron | 40.0% | |
| TCAAGAGCAAAGAATGTGTG+GGG | - | chr8_2:38228298-38228317 | Msa1246580:intron | 40.0% | |
| !! | TGAGAAAGGCATTGAAAGAG+AGG | - | chr8_2:38228353-38228372 | Msa1246580:CDS | 40.0% |
| ! | TGTAGACTATTTGAGACACG+TGG | - | chr8_2:38228414-38228433 | Msa1246580:CDS | 40.0% |
| ! | GTAGACTATTTGAGACACGT+GGG | - | chr8_2:38228415-38228434 | Msa1246580:CDS | 40.0% |
| ! | CGGGTCATAACCAAACATTT+TGG | + | chr8_2:38228495-38228514 | None:intergenic | 40.0% |
| AATGTTTGGTTATGACCCGT+TGG | - | chr8_2:38228496-38228515 | Msa1246580:intron | 40.0% | |
| ! | TTTTGCGTTCTTTGTCCAAC+GGG | + | chr8_2:38228514-38228533 | None:intergenic | 40.0% |
| ! | CTTTTGCGTTCTTTGTCCAA+CGG | + | chr8_2:38228515-38228534 | None:intergenic | 40.0% |
| TCTGAACAACGATTCCAATG+GGG | - | chr8_2:38228542-38228561 | Msa1246580:intron | 40.0% | |
| ATCAGAATCCATTTCCCCAT+TGG | + | chr8_2:38228559-38228578 | None:intergenic | 40.0% | |
| GAAGTACAAGTCATACTGCA+AGG | - | chr8_2:38228841-38228860 | Msa1246580:intron | 40.0% | |
| !! | TCATACTGCAAGGCATTGTT+CGG | - | chr8_2:38228851-38228870 | Msa1246580:intron | 40.0% |
| CAGCCAATTTACCCCAATTA+TGG | - | chr8_2:38229305-38229324 | Msa1246580:CDS | 40.0% | |
| TACCCCAATTATGGACTTCA+TGG | - | chr8_2:38229314-38229333 | Msa1246580:CDS | 40.0% | |
| GAATCATCAACTTCCTGTTC+TGG | - | chr8_2:38229341-38229360 | Msa1246580:CDS | 40.0% | |
| ! | GCACAAGTCATGAATTTTGG+TGG | - | chr8_2:38229371-38229390 | Msa1246580:CDS | 40.0% |
| !! | GTCATGAATTTTGGTGGTCA+TGG | - | chr8_2:38229377-38229396 | Msa1246580:CDS | 40.0% |
| !! | GGGAATGGTACACTTGTTAT+TGG | - | chr8_2:38229481-38229500 | Msa1246580:CDS | 40.0% |
| AGCAGAAACAGGTATATTGC+TGG | - | chr8_2:38229676-38229695 | Msa1246580:intron | 40.0% | |
| ATGTTTAGCATCTGCTGTAG+CGG | - | chr8_2:38230293-38230312 | Msa1246580:intron | 40.0% | |
| ! | TTCTGCATTGATATTGCCTC+AGG | + | chr8_2:38230461-38230480 | None:intergenic | 40.0% |
| !!! | CCCCAACTATTTTAGGGTTT+AGG | - | chr8_2:38230596-38230615 | Msa1246580:intron | 40.0% |
| ! | AGGGTTTAGGGTTTGTTTAG+AGG | - | chr8_2:38230609-38230628 | Msa1246580:intron | 40.0% |
| !! | AACTAACTGCTTTAGGGTCT+AGG | - | chr8_2:38230700-38230719 | Msa1246580:intron | 40.0% |
| !! | ACTAACTGCTTTAGGGTCTA+GGG | - | chr8_2:38230701-38230720 | Msa1246580:intron | 40.0% |
| ! | AGGGTCTAGGGTTTATTTAG+AGG | - | chr8_2:38230713-38230732 | Msa1246580:intron | 40.0% |
| ! | ACTATCAGGGTTTAGGGTTT+AGG | - | chr8_2:38230762-38230781 | Msa1246580:intron | 40.0% |
| ! | CTATCAGGGTTTAGGGTTTA+GGG | - | chr8_2:38230763-38230782 | Msa1246580:intron | 40.0% |
| GAGAGAGACGCAAGTGAAAT+TGG | + | chr8_2:38225619-38225638 | None:intergenic | 45.0% | |
| GAGAGAGAAAGAAGAGGCAA+CGG | + | chr8_2:38225715-38225734 | None:intergenic | 45.0% | |
| TAGAAAACGAACCTGAGGCT+TGG | + | chr8_2:38225799-38225818 | None:intergenic | 45.0% | |
| TGGCCCTATAACATATACGC+TGG | - | chr8_2:38226383-38226402 | Msa1246580:intron | 45.0% | |
| GGCCCTATAACATATACGCT+GGG | - | chr8_2:38226384-38226403 | Msa1246580:intron | 45.0% | |
| GCCCTATAACATATACGCTG+GGG | - | chr8_2:38226385-38226404 | Msa1246580:intron | 45.0% | |
| GAGTTTGTGTGCAACAAGCA+AGG | - | chr8_2:38226992-38227011 | Msa1246580:intron | 45.0% | |
| CCCGAACAAATTGTGAAGCA+AGG | - | chr8_2:38227074-38227093 | Msa1246580:intron | 45.0% | |
| GGGATATATGGTTGCTCAGA+AGG | - | chr8_2:38227282-38227301 | Msa1246580:intron | 45.0% | |
| TATATGGTTGCTCAGAAGGG+TGG | - | chr8_2:38227286-38227305 | Msa1246580:intron | 45.0% | |
| TATATTTGGCGTTGCGTTGC+TGG | - | chr8_2:38227627-38227646 | Msa1246580:intron | 45.0% | |
| GCAGTTGTAACAGATGGAGA+TGG | - | chr8_2:38227724-38227743 | Msa1246580:intron | 45.0% | |
| CAGATGGAGATGGATCAATG+AGG | - | chr8_2:38227734-38227753 | Msa1246580:intron | 45.0% | |
| CATAAGCGATGAGATGCATC+AGG | + | chr8_2:38227781-38227800 | None:intergenic | 45.0% | |
| !! | ACACCATTTCTGGAGGGTTT+TGG | - | chr8_2:38227844-38227863 | Msa1246580:intron | 45.0% |
| ! | CGGAGCAATTTGAGGAGTTT+TGG | - | chr8_2:38227893-38227912 | Msa1246580:intron | 45.0% |
| ATACGCGAACAAGTCACTGT+GGG | - | chr8_2:38227969-38227988 | Msa1246580:intron | 45.0% | |
| CAAGAGCAAAGAATGTGTGG+GGG | - | chr8_2:38228299-38228318 | Msa1246580:intron | 45.0% | |
| CAACGATTCCAATGGGGAAA+TGG | - | chr8_2:38228548-38228567 | Msa1246580:intron | 45.0% | |
| CCTTTACTCTTCACAGGGAT+TGG | + | chr8_2:38228765-38228784 | None:intergenic | 45.0% | |
| CCAATCCCTGTGAAGAGTAA+AGG | - | chr8_2:38228762-38228781 | Msa1246580:intron | 45.0% | |
| GAGCACCTTTACTCTTCACA+GGG | + | chr8_2:38228770-38228789 | None:intergenic | 45.0% | |
| GGTTGAACTGCAGTTGTTAC+CGG | + | chr8_2:38229242-38229261 | None:intergenic | 45.0% | |
| GCATTGGATTAATAGCAGGC+TGG | + | chr8_2:38229280-38229299 | None:intergenic | 45.0% | |
| CGCCATGAAGTCCATAATTG+GGG | + | chr8_2:38229319-38229338 | None:intergenic | 45.0% | |
| CCGCCATGAAGTCCATAATT+GGG | + | chr8_2:38229320-38229339 | None:intergenic | 45.0% | |
| CCCAATTATGGACTTCATGG+CGG | - | chr8_2:38229317-38229336 | Msa1246580:CDS | 45.0% | |
| ACCGCCATGAAGTCCATAAT+TGG | + | chr8_2:38229321-38229340 | None:intergenic | 45.0% | |
| TTTCACTTGGCAGCAGAAAC+AGG | - | chr8_2:38229638-38229657 | Msa1246580:CDS | 45.0% | |
| !! | TTTTGTGCTGCCTTGGCTTT+AGG | - | chr8_2:38229704-38229723 | Msa1246580:intron | 45.0% |
| AGAGGGATGATTCGAACTCA+CGG | + | chr8_2:38230346-38230365 | None:intergenic | 45.0% | |
| TGATATTGCCTCAGGCTCAA+CGG | + | chr8_2:38230453-38230472 | None:intergenic | 45.0% | |
| ACAATGATCGTCCTCACTGT+AGG | - | chr8_2:38230817-38230836 | Msa1246580:CDS | 45.0% | |
| !! | AAAAAAAAAATTAAATACAT+GGG | + | chr8_2:38230944-38230963 | None:intergenic | 5.0% |
| GAAAGAAGAGGCAACGGAGT+GGG | + | chr8_2:38225709-38225728 | None:intergenic | 50.0% | |
| AGAAAGAAGAGGCAACGGAG+TGG | + | chr8_2:38225710-38225729 | None:intergenic | 50.0% | |
| GCACACGAGAGAGAAAGAAG+AGG | + | chr8_2:38225721-38225740 | None:intergenic | 50.0% | |
| CGGCGTCCAAACAATCTTTG+TGG | + | chr8_2:38226649-38226668 | None:intergenic | 50.0% | |
| AAGGGTGGATACGCTGATGT+AGG | - | chr8_2:38227301-38227320 | Msa1246580:intron | 50.0% | |
| TTTGGGCTGATGGGAGTAGT+AGG | - | chr8_2:38227491-38227510 | Msa1246580:intron | 50.0% | |
| CATCTCATCGCTTATGTGCC+TGG | - | chr8_2:38227785-38227804 | Msa1246580:intron | 50.0% | |
| CGCATTCTTATGCAGATGCC+AGG | + | chr8_2:38227806-38227825 | None:intergenic | 50.0% | |
| CATACGCGAACAAGTCACTG+TGG | - | chr8_2:38227968-38227987 | Msa1246580:intron | 50.0% | |
| CATCACTCTCAATCGAACGC+AGG | + | chr8_2:38228206-38228225 | None:intergenic | 50.0% | |
| AGAATGTGTGGGGGATACCA+TGG | - | chr8_2:38228308-38228327 | Msa1246580:intron | 50.0% | |
| ! | GGAGCACCTTTACTCTTCAC+AGG | + | chr8_2:38228771-38228790 | None:intergenic | 50.0% |
| !! | TTCGGAGACAGCTGATTTGC+CGG | - | chr8_2:38229220-38229239 | Msa1246580:intron | 50.0% |
| GGCTGGAACACATGAACAGT+AGG | + | chr8_2:38229263-38229282 | None:intergenic | 50.0% | |
| ! | AACTTCCTGTTCTGGGCTCT+TGG | - | chr8_2:38229349-38229368 | Msa1246580:CDS | 50.0% |
| !! | ATATCCAGTGGCGGATCTTC+AGG | - | chr8_2:38230223-38230242 | Msa1246580:intron | 50.0% |
| !! | TATCCAGTGGCGGATCTTCA+GGG | - | chr8_2:38230224-38230243 | Msa1246580:intron | 50.0% |
| ! | AGCATCTGCTGTAGCGGAAA+TGG | - | chr8_2:38230299-38230318 | Msa1246580:intron | 50.0% |
| ! | TCTGCTGTAGCGGAAATGGA+AGG | - | chr8_2:38230303-38230322 | Msa1246580:intron | 50.0% |
| TAGCGGAAATGGAAGGCTGA+TGG | - | chr8_2:38230310-38230329 | Msa1246580:intron | 50.0% | |
| ! | TGGCTCCCCCCAACTATTTT+AGG | - | chr8_2:38230589-38230608 | Msa1246580:intron | 50.0% |
| ! | GGCTCCCCCCAACTATTTTA+GGG | - | chr8_2:38230590-38230609 | Msa1246580:intron | 50.0% |
| ATTTGGCGTTGCGTTGCTGG+AGG | - | chr8_2:38227630-38227649 | Msa1246580:intron | 55.0% | |
| TTGTGCCAAGAGCCCAGAAC+AGG | + | chr8_2:38229357-38229376 | None:intergenic | 55.0% | |
| GGAAGGCTGATGGTATTGCG+AGG | - | chr8_2:38230320-38230339 | Msa1246580:intron | 55.0% | |
| AGGCTCAACGGTTCGAATCC+TGG | + | chr8_2:38230441-38230460 | None:intergenic | 55.0% | |
| GATTCGAACCGTTGAGCCTG+AGG | - | chr8_2:38230442-38230461 | Msa1246580:intron | 55.0% | |
| !! | CATGTGGTGGTGGTGGAAGG+TGG | + | chr8_2:38225683-38225702 | None:intergenic | 60.0% |
| !! | TCGCATGTGGTGGTGGTGGA+AGG | + | chr8_2:38225686-38225705 | None:intergenic | 60.0% |
| GGAGTGAAGATGGCGCTGCT+GGG | + | chr8_2:38225759-38225778 | None:intergenic | 60.0% | |
| !! | GGTGGTGGACGGAGTGAAGA+TGG | + | chr8_2:38225769-38225788 | None:intergenic | 60.0% |
| !! | TTGGAGAGCGAGGTGGTGGA+CGG | + | chr8_2:38225780-38225799 | None:intergenic | 60.0% |
| AACCTGAGGCTTGGAGAGCG+AGG | + | chr8_2:38225790-38225809 | None:intergenic | 60.0% | |
| CGCAGGTGAGTCGTCAACAC+AGG | + | chr8_2:38228189-38228208 | None:intergenic | 60.0% | |
| ! | GGCTGCGTTTTGTGCTGCCT+TGG | - | chr8_2:38229697-38229716 | Msa1246580:intron | 60.0% |
| !! | TGGGTCGCATGTGGTGGTGG+TGG | + | chr8_2:38225690-38225709 | None:intergenic | 65.0% |
| GAGTGGGTCGCATGTGGTGG+TGG | + | chr8_2:38225693-38225712 | None:intergenic | 65.0% | |
| ACGGAGTGGGTCGCATGTGG+TGG | + | chr8_2:38225696-38225715 | None:intergenic | 65.0% | |
| GCAACGGAGTGGGTCGCATG+TGG | + | chr8_2:38225699-38225718 | None:intergenic | 65.0% | |
| CGGAGTGAAGATGGCGCTGC+TGG | + | chr8_2:38225760-38225779 | None:intergenic | 65.0% | |
| AGGCTTGGAGAGCGAGGTGG+TGG | + | chr8_2:38225784-38225803 | None:intergenic | 65.0% | |
| CTGAGGCTTGGAGAGCGAGG+TGG | + | chr8_2:38225787-38225806 | None:intergenic | 65.0% | |
| CACCTCGCTCTCCAAGCCTC+AGG | - | chr8_2:38225785-38225804 | Msa1246580:intron | 65.0% | |
| GAGCCCTGAAGATCCGCCAC+TGG | + | chr8_2:38230230-38230249 | None:intergenic | 65.0% | |
| GGCGCTGCTGGGTCGCACGT+GGG | + | chr8_2:38225748-38225767 | None:intergenic | 75.0% | |
| TGGCGCTGCTGGGTCGCACG+TGG | + | chr8_2:38225749-38225768 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 38225589 | 38231024 | 38225589 | ID=Msa1246580;Name=Msa1246580 |
| chr8_2 | mRNA | 38225589 | 38231024 | 38225589 | ID=Msa1246580-mRNA-1;Parent=Msa1246580;Name=Msa1246580-mRNA-1;_AED=0.30;_eAED=0.35;_QI=111|0|0.2|0.8|0.5|0.6|5|0|231 |
| chr8_2 | exon | 38225589 | 38225639 | 38225589 | ID=Msa1246580-mRNA-1:exon:11945;Parent=Msa1246580-mRNA-1 |
| chr8_2 | exon | 38228323 | 38228487 | 38228323 | ID=Msa1246580-mRNA-1:exon:11944;Parent=Msa1246580-mRNA-1 |
| chr8_2 | exon | 38229295 | 38229459 | 38229295 | ID=Msa1246580-mRNA-1:exon:11943;Parent=Msa1246580-mRNA-1 |
| chr8_2 | exon | 38229481 | 38229688 | 38229481 | ID=Msa1246580-mRNA-1:exon:11942;Parent=Msa1246580-mRNA-1 |
| chr8_2 | exon | 38230807 | 38231024 | 38230807 | ID=Msa1246580-mRNA-1:exon:11941;Parent=Msa1246580-mRNA-1 |
| chr8_2 | five_prime_UTR | 38230914 | 38231024 | 38230914 | ID=Msa1246580-mRNA-1:five_prime_utr;Parent=Msa1246580-mRNA-1 |
| chr8_2 | CDS | 38230807 | 38230913 | 38230807 | ID=Msa1246580-mRNA-1:cds;Parent=Msa1246580-mRNA-1 |
| chr8_2 | CDS | 38229481 | 38229688 | 38229481 | ID=Msa1246580-mRNA-1:cds;Parent=Msa1246580-mRNA-1 |
| chr8_2 | CDS | 38229295 | 38229459 | 38229295 | ID=Msa1246580-mRNA-1:cds;Parent=Msa1246580-mRNA-1 |
| chr8_2 | CDS | 38228323 | 38228487 | 38228323 | ID=Msa1246580-mRNA-1:cds;Parent=Msa1246580-mRNA-1 |
| chr8_2 | CDS | 38225589 | 38225639 | 38225589 | ID=Msa1246580-mRNA-1:cds;Parent=Msa1246580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
