Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247140 | XP_013445709.1 | 96.734 | 398 | 9 | 2 | 1 | 397 | 1 | 395 | 0.0 | 795 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247140 | sp|Q9ZVH0|FEZ_ARATH | 61.455 | 275 | 87 | 5 | 1 | 263 | 1 | 268 | 3.69e-108 | 327 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247140 | A0A072U1R3 | 96.734 | 398 | 9 | 2 | 1 | 397 | 1 | 395 | 0.0 | 795 |
Gene ID | Type | Classification |
---|---|---|
Msa1247140 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1247140 | Msa1286420 | 0.850456 | 1.678650e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247140 | MtrunA17_Chr8g0361731 | 96.734 | 398 | 9 | 2 | 1 | 397 | 1 | 395 | 0.0 | 795 |
Msa1247140 | MtrunA17_Chr5g0417001 | 59.861 | 431 | 99 | 11 | 1 | 397 | 1 | 391 | 3.84e-164 | 466 |
Msa1247140 | MtrunA17_Chr6g0453131 | 49.635 | 411 | 173 | 12 | 1 | 397 | 1 | 391 | 5.21e-124 | 363 |
Msa1247140 | MtrunA17_Chr5g0442771 | 62.874 | 167 | 61 | 1 | 8 | 173 | 12 | 178 | 1.70e-74 | 234 |
Msa1247140 | MtrunA17_Chr2g0311651 | 60.753 | 186 | 63 | 6 | 11 | 190 | 19 | 200 | 6.38e-74 | 233 |
Msa1247140 | MtrunA17_Chr2g0311661 | 63.314 | 169 | 55 | 4 | 11 | 173 | 18 | 185 | 2.58e-72 | 228 |
Msa1247140 | MtrunA17_Chr4g0047841 | 52.273 | 176 | 70 | 2 | 16 | 177 | 17 | 192 | 2.00e-60 | 199 |
Msa1247140 | MtrunA17_Chr2g0318101 | 45.455 | 209 | 101 | 3 | 16 | 212 | 17 | 224 | 2.36e-60 | 199 |
Msa1247140 | MtrunA17_Chr4g0076731 | 51.462 | 171 | 71 | 3 | 12 | 182 | 52 | 210 | 4.31e-59 | 198 |
Msa1247140 | MtrunA17_Chr7g0252971 | 54.217 | 166 | 64 | 4 | 16 | 174 | 10 | 170 | 3.12e-58 | 193 |
Msa1247140 | MtrunA17_Chr5g0417791 | 54.321 | 162 | 67 | 3 | 16 | 177 | 5 | 159 | 2.60e-57 | 188 |
Msa1247140 | MtrunA17_Chr2g0326361 | 51.445 | 173 | 79 | 2 | 1 | 173 | 1 | 168 | 1.15e-56 | 188 |
Msa1247140 | MtrunA17_Chr4g0018391 | 36.283 | 339 | 158 | 9 | 16 | 351 | 9 | 292 | 2.60e-56 | 188 |
Msa1247140 | MtrunA17_Chr8g0384721 | 53.165 | 158 | 66 | 3 | 16 | 173 | 9 | 158 | 7.85e-56 | 185 |
Msa1247140 | MtrunA17_Chr4g0042561 | 55.000 | 160 | 65 | 3 | 16 | 175 | 11 | 163 | 2.01e-55 | 184 |
Msa1247140 | MtrunA17_Chr3g0124761 | 48.634 | 183 | 67 | 4 | 16 | 185 | 9 | 177 | 4.46e-55 | 183 |
Msa1247140 | MtrunA17_Chr5g0398971 | 49.133 | 173 | 74 | 3 | 16 | 185 | 9 | 170 | 2.00e-54 | 183 |
Msa1247140 | MtrunA17_Chr6g0453451 | 40.909 | 264 | 122 | 7 | 8 | 257 | 16 | 259 | 4.33e-54 | 182 |
Msa1247140 | MtrunA17_Chr4g0060931 | 45.876 | 194 | 83 | 3 | 16 | 196 | 19 | 203 | 4.14e-53 | 180 |
Msa1247140 | MtrunA17_Chr2g0318081 | 49.451 | 182 | 80 | 5 | 16 | 197 | 18 | 187 | 4.33e-53 | 180 |
Msa1247140 | MtrunA17_Chr7g0263931 | 50.595 | 168 | 73 | 4 | 12 | 176 | 8 | 168 | 5.38e-53 | 179 |
Msa1247140 | MtrunA17_Chr4g0038751 | 48.649 | 185 | 76 | 5 | 1 | 184 | 4 | 170 | 7.36e-53 | 178 |
Msa1247140 | MtrunA17_Chr3g0091921 | 50.898 | 167 | 73 | 2 | 8 | 174 | 10 | 167 | 7.70e-53 | 178 |
Msa1247140 | MtrunA17_Chr8g0372121 | 43.367 | 196 | 93 | 5 | 10 | 201 | 2 | 183 | 9.37e-53 | 178 |
Msa1247140 | MtrunA17_Chr4g0056541 | 47.619 | 168 | 72 | 3 | 16 | 180 | 9 | 163 | 2.63e-52 | 178 |
Msa1247140 | MtrunA17_Chr3g0130731 | 51.266 | 158 | 68 | 3 | 16 | 173 | 9 | 157 | 2.77e-52 | 176 |
Msa1247140 | MtrunA17_Chr5g0405211 | 45.109 | 184 | 83 | 5 | 8 | 186 | 2 | 172 | 4.49e-52 | 177 |
Msa1247140 | MtrunA17_Chr8g0359921 | 51.497 | 167 | 71 | 5 | 16 | 182 | 16 | 172 | 6.52e-52 | 176 |
Msa1247140 | MtrunA17_Chr2g0309891 | 50.932 | 161 | 67 | 4 | 16 | 174 | 8 | 158 | 8.99e-52 | 176 |
Msa1247140 | MtrunA17_Chr6g0461661 | 45.455 | 176 | 88 | 2 | 11 | 185 | 14 | 182 | 9.82e-51 | 174 |
Msa1247140 | MtrunA17_Chr3g0139331 | 48.864 | 176 | 76 | 3 | 1 | 176 | 1 | 162 | 1.10e-49 | 171 |
Msa1247140 | MtrunA17_Chr7g0253011 | 41.743 | 218 | 99 | 5 | 1 | 197 | 1 | 211 | 2.58e-49 | 171 |
Msa1247140 | MtrunA17_Chr6g0481091 | 42.328 | 189 | 95 | 4 | 16 | 202 | 8 | 184 | 3.90e-49 | 166 |
Msa1247140 | MtrunA17_Chr6g0484441 | 46.471 | 170 | 78 | 3 | 10 | 179 | 1 | 157 | 4.05e-49 | 169 |
Msa1247140 | MtrunA17_Chr4g0017921 | 50.000 | 164 | 63 | 4 | 16 | 175 | 10 | 158 | 9.16e-49 | 169 |
Msa1247140 | MtrunA17_Chr2g0316971 | 37.452 | 259 | 102 | 6 | 16 | 238 | 25 | 259 | 1.87e-48 | 169 |
Msa1247140 | MtrunA17_Chr1g0200561 | 45.977 | 174 | 78 | 4 | 3 | 173 | 8 | 168 | 2.17e-48 | 167 |
Msa1247140 | MtrunA17_Chr3g0109821 | 48.795 | 166 | 71 | 4 | 16 | 178 | 8 | 162 | 5.20e-48 | 173 |
Msa1247140 | MtrunA17_Chr8g0346001 | 46.988 | 166 | 77 | 4 | 16 | 175 | 17 | 177 | 6.34e-48 | 168 |
Msa1247140 | MtrunA17_Chr7g0214071 | 47.253 | 182 | 81 | 4 | 1 | 181 | 1 | 168 | 1.06e-47 | 163 |
Msa1247140 | MtrunA17_Chr2g0309331 | 46.012 | 163 | 73 | 3 | 16 | 175 | 12 | 162 | 2.22e-47 | 165 |
Msa1247140 | MtrunA17_Chr5g0428991 | 50.307 | 163 | 68 | 4 | 17 | 177 | 28 | 179 | 2.62e-47 | 171 |
Msa1247140 | MtrunA17_Chr1g0147421 | 46.243 | 173 | 81 | 3 | 3 | 174 | 16 | 177 | 3.77e-47 | 164 |
Msa1247140 | MtrunA17_Chr5g0400461 | 39.738 | 229 | 109 | 8 | 16 | 235 | 8 | 216 | 4.04e-47 | 164 |
Msa1247140 | MtrunA17_Chr5g0433781 | 46.584 | 161 | 73 | 3 | 16 | 174 | 8 | 157 | 7.91e-47 | 169 |
Msa1247140 | MtrunA17_Chr1g0183741 | 36.957 | 230 | 126 | 3 | 16 | 245 | 12 | 222 | 1.63e-45 | 158 |
Msa1247140 | MtrunA17_Chr3g0130101 | 45.732 | 164 | 76 | 4 | 12 | 173 | 5 | 157 | 1.71e-45 | 160 |
Msa1247140 | MtrunA17_Chr3g0128151 | 47.273 | 165 | 74 | 4 | 17 | 179 | 25 | 178 | 1.88e-45 | 165 |
Msa1247140 | MtrunA17_Chr4g0054791 | 46.784 | 171 | 79 | 4 | 16 | 183 | 8 | 169 | 2.06e-45 | 159 |
Msa1247140 | MtrunA17_Chr7g0217721 | 46.061 | 165 | 81 | 3 | 17 | 175 | 22 | 184 | 4.34e-45 | 159 |
Msa1247140 | MtrunA17_Chr8g0364791 | 43.827 | 162 | 78 | 4 | 14 | 173 | 6 | 156 | 1.28e-44 | 160 |
Msa1247140 | MtrunA17_Chr2g0312321 | 46.199 | 171 | 80 | 4 | 10 | 180 | 7 | 165 | 1.49e-44 | 156 |
Msa1247140 | MtrunA17_Chr3g0144271 | 34.551 | 301 | 118 | 7 | 8 | 233 | 17 | 313 | 2.16e-44 | 159 |
Msa1247140 | MtrunA17_Chr1g0201021 | 47.024 | 168 | 72 | 5 | 12 | 174 | 15 | 170 | 3.23e-44 | 161 |
Msa1247140 | MtrunA17_Chr3g0128111 | 43.636 | 165 | 80 | 4 | 17 | 179 | 45 | 198 | 4.04e-44 | 153 |
Msa1247140 | MtrunA17_Chr7g0217711 | 51.562 | 128 | 60 | 1 | 17 | 144 | 22 | 147 | 9.32e-43 | 147 |
Msa1247140 | MtrunA17_Chr7g0261411 | 40.964 | 166 | 85 | 1 | 6 | 171 | 2 | 154 | 1.55e-42 | 150 |
Msa1247140 | MtrunA17_Chr8g0384201 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 4.49e-42 | 154 |
Msa1247140 | MtrunA17_Chr1g0197361 | 44.311 | 167 | 72 | 5 | 16 | 176 | 10 | 161 | 4.86e-42 | 155 |
Msa1247140 | MtrunA17_Chr8g0385991 | 43.114 | 167 | 85 | 3 | 4 | 170 | 8 | 164 | 1.11e-41 | 146 |
Msa1247140 | MtrunA17_Chr1g0197351 | 42.857 | 168 | 81 | 4 | 14 | 175 | 42 | 200 | 3.18e-41 | 151 |
Msa1247140 | MtrunA17_Chr3g0092671 | 39.785 | 186 | 95 | 6 | 16 | 198 | 7 | 178 | 4.73e-40 | 149 |
Msa1247140 | MtrunA17_Chr3g0131911 | 42.222 | 180 | 93 | 4 | 4 | 181 | 8 | 178 | 1.09e-37 | 136 |
Msa1247140 | MtrunA17_Chr8g0345671 | 49.254 | 134 | 64 | 3 | 17 | 147 | 14 | 146 | 1.07e-36 | 137 |
Msa1247140 | MtrunA17_Chr4g0026141 | 35.023 | 217 | 124 | 6 | 10 | 221 | 1 | 205 | 3.35e-36 | 133 |
Msa1247140 | MtrunA17_Chr7g0266701 | 30.000 | 250 | 156 | 9 | 14 | 256 | 4 | 241 | 8.87e-35 | 129 |
Msa1247140 | MtrunA17_Chr2g0321631 | 40.000 | 165 | 80 | 6 | 16 | 171 | 6 | 160 | 1.91e-32 | 122 |
Msa1247140 | MtrunA17_Chr8g0345691 | 47.244 | 127 | 63 | 3 | 17 | 140 | 15 | 140 | 3.68e-32 | 125 |
Msa1247140 | MtrunA17_Chr3g0113001 | 43.200 | 125 | 63 | 2 | 59 | 183 | 10 | 126 | 2.13e-29 | 115 |
Msa1247140 | MtrunA17_Chr8g0345711 | 40.146 | 137 | 78 | 3 | 17 | 150 | 15 | 150 | 2.33e-29 | 112 |
Msa1247140 | MtrunA17_Chr4g0050701 | 37.342 | 158 | 88 | 2 | 16 | 173 | 13 | 159 | 1.38e-28 | 110 |
Msa1247140 | MtrunA17_Chr8g0345731 | 41.844 | 141 | 76 | 5 | 14 | 148 | 23 | 163 | 4.55e-27 | 105 |
Msa1247140 | MtrunA17_Chr8g0345721 | 35.976 | 164 | 72 | 3 | 17 | 148 | 38 | 200 | 6.67e-26 | 103 |
Msa1247140 | MtrunA17_Chr2g0321741 | 43.925 | 107 | 57 | 2 | 34 | 139 | 12 | 116 | 7.97e-26 | 107 |
Msa1247140 | MtrunA17_Chr8g0345741 | 41.176 | 119 | 66 | 3 | 25 | 140 | 2 | 119 | 1.74e-23 | 95.9 |
Msa1247140 | MtrunA17_Chr8g0345701 | 36.879 | 141 | 69 | 5 | 17 | 140 | 10 | 147 | 1.13e-20 | 88.6 |
Msa1247140 | MtrunA17_Chr8g0384351 | 32.738 | 168 | 82 | 6 | 16 | 183 | 12 | 148 | 1.50e-19 | 85.9 |
Msa1247140 | MtrunA17_Chr3g0113031 | 40.566 | 106 | 52 | 3 | 77 | 180 | 3 | 99 | 2.35e-19 | 87.0 |
Msa1247140 | MtrunA17_Chr7g0243371 | 45.455 | 77 | 42 | 0 | 67 | 143 | 17 | 93 | 3.23e-19 | 82.8 |
Msa1247140 | MtrunA17_Chr3g0130321 | 31.481 | 162 | 96 | 5 | 16 | 172 | 9 | 160 | 2.16e-17 | 80.1 |
Msa1247140 | MtrunA17_Chr7g0251651 | 29.518 | 166 | 100 | 6 | 17 | 180 | 21 | 171 | 3.08e-16 | 76.6 |
Msa1247140 | MtrunA17_Chr7g0251671 | 31.818 | 132 | 82 | 5 | 17 | 145 | 13 | 139 | 1.45e-15 | 73.9 |
Msa1247140 | MtrunA17_Chr7g0251661 | 31.884 | 138 | 87 | 5 | 12 | 146 | 7 | 140 | 3.08e-15 | 72.8 |
Msa1247140 | MtrunA17_Chr1g0194791 | 60.417 | 48 | 18 | 1 | 16 | 62 | 48 | 95 | 2.74e-13 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1247140 | AT1G26870.1 | 61.455 | 275 | 87 | 5 | 1 | 263 | 1 | 268 | 3.76e-109 | 327 |
Msa1247140 | AT5G39820.1 | 67.980 | 203 | 52 | 4 | 2 | 191 | 8 | 210 | 1.46e-98 | 297 |
Msa1247140 | AT2G43000.1 | 60.116 | 173 | 57 | 3 | 8 | 180 | 12 | 172 | 1.71e-72 | 228 |
Msa1247140 | AT3G12910.1 | 48.402 | 219 | 101 | 5 | 7 | 214 | 14 | 231 | 1.34e-61 | 201 |
Msa1247140 | AT2G02450.1 | 47.573 | 206 | 84 | 5 | 13 | 218 | 50 | 231 | 7.24e-60 | 199 |
Msa1247140 | AT2G02450.2 | 47.573 | 206 | 84 | 5 | 13 | 218 | 50 | 231 | 9.78e-60 | 199 |
Msa1247140 | AT3G15510.1 | 53.704 | 162 | 73 | 2 | 18 | 177 | 21 | 182 | 1.65e-58 | 195 |
Msa1247140 | AT3G04070.2 | 53.529 | 170 | 64 | 3 | 16 | 177 | 12 | 174 | 8.74e-58 | 192 |
Msa1247140 | AT1G69490.1 | 45.320 | 203 | 104 | 4 | 16 | 218 | 11 | 206 | 1.93e-57 | 189 |
Msa1247140 | AT1G61110.1 | 53.143 | 175 | 71 | 4 | 16 | 182 | 18 | 189 | 2.40e-57 | 191 |
Msa1247140 | AT3G04070.1 | 51.397 | 179 | 70 | 3 | 16 | 177 | 12 | 190 | 7.87e-57 | 190 |
Msa1247140 | AT5G63790.1 | 45.098 | 204 | 94 | 5 | 12 | 214 | 47 | 233 | 5.95e-55 | 184 |
Msa1247140 | AT5G63790.2 | 45.098 | 204 | 94 | 5 | 12 | 214 | 57 | 243 | 7.40e-55 | 184 |
Msa1247140 | AT1G01720.1 | 52.410 | 166 | 71 | 3 | 16 | 181 | 9 | 166 | 7.43e-55 | 183 |
Msa1247140 | AT5G61430.1 | 36.486 | 296 | 142 | 6 | 1 | 285 | 1 | 261 | 1.33e-54 | 184 |
Msa1247140 | AT1G76420.1 | 45.989 | 187 | 91 | 1 | 1 | 187 | 9 | 185 | 1.46e-54 | 184 |
Msa1247140 | AT4G27410.2 | 50.595 | 168 | 72 | 3 | 16 | 183 | 16 | 172 | 3.79e-54 | 181 |
Msa1247140 | AT2G17040.1 | 50.286 | 175 | 70 | 4 | 11 | 184 | 3 | 161 | 5.59e-54 | 180 |
Msa1247140 | AT5G08790.1 | 51.534 | 163 | 71 | 4 | 12 | 173 | 4 | 159 | 2.30e-53 | 179 |
Msa1247140 | AT1G12260.2 | 48.810 | 168 | 70 | 4 | 16 | 180 | 9 | 163 | 4.63e-53 | 180 |
Msa1247140 | AT4G36160.1 | 47.701 | 174 | 75 | 4 | 16 | 186 | 12 | 172 | 4.95e-53 | 181 |
Msa1247140 | AT4G36160.3 | 47.701 | 174 | 75 | 4 | 16 | 186 | 12 | 172 | 4.95e-53 | 181 |
Msa1247140 | AT4G36160.2 | 47.701 | 174 | 75 | 4 | 16 | 186 | 16 | 176 | 5.34e-53 | 181 |
Msa1247140 | AT1G12260.1 | 48.810 | 168 | 70 | 4 | 16 | 180 | 9 | 163 | 6.51e-53 | 181 |
Msa1247140 | AT5G07680.2 | 43.868 | 212 | 100 | 3 | 16 | 217 | 5 | 207 | 7.07e-53 | 179 |
Msa1247140 | AT1G52880.1 | 54.438 | 169 | 66 | 3 | 18 | 180 | 21 | 184 | 8.80e-53 | 179 |
Msa1247140 | AT5G07680.1 | 43.868 | 212 | 100 | 3 | 16 | 217 | 19 | 221 | 1.12e-52 | 179 |
Msa1247140 | AT5G39610.1 | 44.554 | 202 | 89 | 4 | 16 | 205 | 22 | 212 | 1.85e-52 | 177 |
Msa1247140 | AT2G18060.3 | 47.701 | 174 | 74 | 5 | 16 | 186 | 11 | 170 | 2.98e-52 | 178 |
Msa1247140 | AT2G18060.1 | 47.701 | 174 | 74 | 5 | 16 | 186 | 11 | 170 | 2.98e-52 | 178 |
Msa1247140 | AT3G15500.1 | 51.190 | 168 | 67 | 4 | 16 | 181 | 16 | 170 | 4.78e-52 | 176 |
Msa1247140 | AT1G77450.1 | 40.244 | 246 | 129 | 7 | 16 | 252 | 12 | 248 | 5.46e-52 | 174 |
Msa1247140 | AT2G24430.2 | 47.093 | 172 | 81 | 1 | 8 | 179 | 10 | 171 | 9.77e-52 | 176 |
Msa1247140 | AT2G24430.1 | 47.093 | 172 | 81 | 1 | 8 | 179 | 10 | 171 | 9.77e-52 | 176 |
Msa1247140 | AT1G52890.1 | 48.370 | 184 | 79 | 5 | 16 | 197 | 16 | 185 | 1.15e-51 | 176 |
Msa1247140 | AT4G10350.1 | 35.331 | 317 | 151 | 10 | 16 | 322 | 11 | 283 | 1.80e-51 | 176 |
Msa1247140 | AT1G62700.1 | 43.077 | 195 | 88 | 4 | 16 | 200 | 9 | 190 | 5.63e-51 | 176 |
Msa1247140 | AT1G62700.2 | 43.077 | 195 | 88 | 4 | 16 | 200 | 9 | 190 | 5.63e-51 | 176 |
Msa1247140 | AT3G17730.1 | 48.193 | 166 | 73 | 3 | 16 | 179 | 8 | 162 | 6.59e-51 | 171 |
Msa1247140 | AT5G18270.1 | 47.368 | 171 | 81 | 3 | 5 | 175 | 13 | 174 | 2.82e-50 | 172 |
Msa1247140 | AT3G18400.1 | 48.235 | 170 | 76 | 3 | 10 | 179 | 1 | 158 | 3.26e-50 | 172 |
Msa1247140 | AT5G66300.1 | 47.090 | 189 | 80 | 6 | 16 | 199 | 14 | 187 | 4.13e-50 | 171 |
Msa1247140 | AT3G04060.1 | 48.256 | 172 | 77 | 3 | 16 | 183 | 22 | 185 | 4.27e-50 | 172 |
Msa1247140 | AT5G62380.2 | 47.826 | 161 | 68 | 4 | 16 | 173 | 9 | 156 | 5.90e-50 | 172 |
Msa1247140 | AT5G62380.1 | 47.826 | 161 | 68 | 4 | 16 | 173 | 9 | 156 | 5.90e-50 | 172 |
Msa1247140 | AT1G71930.2 | 39.163 | 263 | 125 | 9 | 10 | 262 | 5 | 242 | 5.99e-50 | 171 |
Msa1247140 | AT1G71930.1 | 39.163 | 263 | 125 | 9 | 10 | 262 | 5 | 242 | 5.99e-50 | 171 |
Msa1247140 | AT4G27410.3 | 45.946 | 185 | 72 | 4 | 16 | 183 | 16 | 189 | 7.05e-50 | 171 |
Msa1247140 | AT1G65910.1 | 49.693 | 163 | 69 | 3 | 14 | 174 | 6 | 157 | 8.47e-50 | 177 |
Msa1247140 | AT1G33280.1 | 50.307 | 163 | 64 | 3 | 16 | 175 | 10 | 158 | 8.49e-50 | 170 |
Msa1247140 | AT5G18270.2 | 46.784 | 171 | 82 | 3 | 5 | 175 | 13 | 174 | 1.81e-49 | 170 |
Msa1247140 | AT3G29035.1 | 47.120 | 191 | 86 | 6 | 7 | 194 | 16 | 194 | 2.75e-49 | 169 |
Msa1247140 | AT3G03200.1 | 45.604 | 182 | 86 | 5 | 16 | 194 | 8 | 179 | 4.23e-49 | 173 |
Msa1247140 | AT4G17980.1 | 47.500 | 160 | 75 | 2 | 16 | 173 | 8 | 160 | 4.99e-49 | 167 |
Msa1247140 | AT4G17980.2 | 47.500 | 160 | 75 | 2 | 16 | 173 | 8 | 160 | 6.70e-49 | 167 |
Msa1247140 | AT3G61910.1 | 39.394 | 231 | 121 | 7 | 16 | 232 | 13 | 238 | 8.49e-49 | 169 |
Msa1247140 | AT3G15170.1 | 47.337 | 169 | 82 | 2 | 11 | 179 | 17 | 178 | 1.44e-48 | 167 |
Msa1247140 | AT5G17260.1 | 46.199 | 171 | 80 | 4 | 16 | 184 | 8 | 168 | 1.69e-48 | 171 |
Msa1247140 | AT5G53950.1 | 45.930 | 172 | 86 | 2 | 12 | 183 | 15 | 179 | 2.34e-48 | 169 |
Msa1247140 | AT2G46770.1 | 46.108 | 167 | 81 | 3 | 16 | 175 | 18 | 182 | 1.54e-47 | 166 |
Msa1247140 | AT3G10500.1 | 46.667 | 165 | 75 | 4 | 14 | 176 | 9 | 162 | 4.88e-46 | 166 |
Msa1247140 | AT1G32770.1 | 45.122 | 164 | 84 | 3 | 16 | 175 | 18 | 179 | 1.46e-45 | 160 |
Msa1247140 | AT4G35580.1 | 48.824 | 170 | 73 | 5 | 6 | 173 | 2 | 159 | 1.48e-45 | 164 |
Msa1247140 | AT1G34180.3 | 45.143 | 175 | 83 | 3 | 4 | 176 | 6 | 169 | 1.52e-45 | 163 |
Msa1247140 | AT1G54330.1 | 46.707 | 167 | 73 | 3 | 16 | 180 | 8 | 160 | 1.53e-45 | 159 |
Msa1247140 | AT1G33060.1 | 46.951 | 164 | 74 | 3 | 12 | 173 | 22 | 174 | 1.61e-45 | 166 |
Msa1247140 | AT4G35580.3 | 48.824 | 170 | 73 | 5 | 6 | 173 | 2 | 159 | 1.65e-45 | 164 |
Msa1247140 | AT4G35580.2 | 48.824 | 170 | 73 | 5 | 6 | 173 | 2 | 159 | 1.68e-45 | 164 |
Msa1247140 | AT1G33060.2 | 46.951 | 164 | 74 | 3 | 12 | 173 | 22 | 174 | 1.72e-45 | 166 |
Msa1247140 | AT5G13180.1 | 47.399 | 173 | 74 | 3 | 4 | 176 | 8 | 163 | 2.10e-45 | 157 |
Msa1247140 | AT1G79580.3 | 46.626 | 163 | 71 | 4 | 16 | 175 | 19 | 168 | 2.56e-45 | 160 |
Msa1247140 | AT1G79580.5 | 46.626 | 163 | 71 | 4 | 16 | 175 | 19 | 168 | 2.56e-45 | 160 |
Msa1247140 | AT1G79580.4 | 46.626 | 163 | 71 | 4 | 16 | 175 | 19 | 168 | 2.56e-45 | 160 |
Msa1247140 | AT1G79580.2 | 46.626 | 163 | 71 | 4 | 16 | 175 | 19 | 168 | 2.56e-45 | 160 |
Msa1247140 | AT1G79580.1 | 46.626 | 163 | 71 | 4 | 16 | 175 | 19 | 168 | 2.56e-45 | 160 |
Msa1247140 | AT1G32510.1 | 36.364 | 275 | 132 | 10 | 16 | 265 | 8 | 264 | 3.70e-45 | 157 |
Msa1247140 | AT5G46590.2 | 54.688 | 128 | 55 | 2 | 16 | 141 | 8 | 134 | 6.40e-45 | 157 |
Msa1247140 | AT5G46590.1 | 54.688 | 128 | 55 | 2 | 16 | 141 | 8 | 134 | 8.35e-45 | 157 |
Msa1247140 | AT1G34180.1 | 45.143 | 175 | 83 | 3 | 4 | 176 | 6 | 169 | 9.58e-45 | 163 |
Msa1247140 | AT3G10490.1 | 43.023 | 172 | 86 | 4 | 6 | 175 | 19 | 180 | 1.55e-44 | 154 |
Msa1247140 | AT1G56010.2 | 47.368 | 171 | 69 | 5 | 10 | 173 | 15 | 171 | 1.97e-44 | 157 |
Msa1247140 | AT1G34190.1 | 44.571 | 175 | 82 | 4 | 5 | 176 | 7 | 169 | 4.50e-44 | 161 |
Msa1247140 | AT3G12977.1 | 44.379 | 169 | 84 | 3 | 10 | 178 | 14 | 172 | 8.54e-44 | 154 |
Msa1247140 | AT5G04410.1 | 45.055 | 182 | 83 | 7 | 14 | 192 | 9 | 176 | 1.07e-43 | 160 |
Msa1247140 | AT3G10480.1 | 44.578 | 166 | 76 | 4 | 14 | 175 | 27 | 180 | 1.93e-43 | 157 |
Msa1247140 | AT3G10480.2 | 44.048 | 168 | 73 | 4 | 14 | 175 | 27 | 179 | 2.47e-43 | 157 |
Msa1247140 | AT1G34180.4 | 41.711 | 187 | 84 | 3 | 4 | 176 | 6 | 181 | 3.53e-43 | 157 |
Msa1247140 | AT3G10490.2 | 44.512 | 164 | 79 | 4 | 14 | 175 | 27 | 180 | 6.70e-43 | 155 |
Msa1247140 | AT5G24590.2 | 46.199 | 171 | 79 | 4 | 8 | 175 | 6 | 166 | 1.11e-42 | 155 |
Msa1247140 | AT1G34180.2 | 41.711 | 187 | 84 | 3 | 4 | 176 | 6 | 181 | 1.96e-42 | 157 |
Msa1247140 | AT5G09330.5 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 3.39e-41 | 152 |
Msa1247140 | AT5G09330.2 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 3.39e-41 | 152 |
Msa1247140 | AT5G09330.4 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 3.39e-41 | 152 |
Msa1247140 | AT5G09330.3 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 3.39e-41 | 152 |
Msa1247140 | AT5G09330.1 | 41.975 | 162 | 81 | 4 | 14 | 173 | 6 | 156 | 3.39e-41 | 152 |
Msa1247140 | AT4G28530.1 | 39.674 | 184 | 82 | 3 | 6 | 173 | 2 | 172 | 1.23e-40 | 147 |
Msa1247140 | AT5G64060.1 | 31.786 | 280 | 158 | 10 | 14 | 284 | 6 | 261 | 1.24e-40 | 147 |
Msa1247140 | AT3G49530.2 | 42.767 | 159 | 79 | 3 | 17 | 173 | 16 | 164 | 2.46e-40 | 148 |
Msa1247140 | AT3G49530.1 | 42.767 | 159 | 79 | 3 | 17 | 173 | 16 | 164 | 7.52e-40 | 148 |
Msa1247140 | AT2G33480.1 | 42.458 | 179 | 88 | 5 | 1 | 178 | 1 | 165 | 1.56e-39 | 142 |
Msa1247140 | AT5G22290.1 | 39.535 | 172 | 83 | 4 | 14 | 181 | 21 | 175 | 6.17e-39 | 142 |
Msa1247140 | AT2G33480.2 | 41.899 | 179 | 87 | 5 | 1 | 178 | 1 | 163 | 2.60e-38 | 139 |
Msa1247140 | AT3G10480.3 | 37.563 | 197 | 78 | 4 | 14 | 175 | 27 | 213 | 6.39e-38 | 144 |
Msa1247140 | AT3G44290.2 | 46.825 | 126 | 64 | 2 | 15 | 139 | 15 | 138 | 1.25e-37 | 136 |
Msa1247140 | AT2G27300.1 | 44.531 | 128 | 68 | 2 | 13 | 139 | 13 | 138 | 2.74e-37 | 138 |
Msa1247140 | AT3G44290.1 | 46.825 | 126 | 64 | 2 | 15 | 139 | 15 | 138 | 5.30e-37 | 137 |
Msa1247140 | AT5G04395.1 | 39.024 | 164 | 84 | 3 | 6 | 155 | 20 | 181 | 5.76e-35 | 127 |
Msa1247140 | AT5G61430.2 | 33.476 | 233 | 111 | 5 | 62 | 285 | 1 | 198 | 1.75e-34 | 129 |
Msa1247140 | AT2G43000.2 | 58.095 | 105 | 32 | 3 | 76 | 180 | 2 | 94 | 4.97e-33 | 123 |
Msa1247140 | AT1G32870.2 | 50.769 | 130 | 58 | 3 | 14 | 141 | 10 | 135 | 5.13e-33 | 130 |
Msa1247140 | AT1G32870.1 | 50.769 | 130 | 58 | 3 | 14 | 141 | 10 | 135 | 5.27e-33 | 130 |
Msa1247140 | AT1G32870.3 | 50.769 | 130 | 58 | 3 | 14 | 141 | 46 | 171 | 9.84e-33 | 129 |
Msa1247140 | AT4G10350.2 | 31.970 | 269 | 132 | 9 | 61 | 322 | 12 | 236 | 1.34e-30 | 119 |
Msa1247140 | AT5G22380.1 | 35.233 | 193 | 104 | 8 | 17 | 202 | 8 | 186 | 1.95e-30 | 117 |
Msa1247140 | AT5G64530.1 | 39.264 | 163 | 82 | 3 | 16 | 173 | 5 | 155 | 6.01e-30 | 114 |
Msa1247140 | AT3G44350.2 | 35.429 | 175 | 95 | 5 | 10 | 177 | 1 | 164 | 2.57e-29 | 114 |
Msa1247140 | AT3G12977.2 | 45.833 | 120 | 55 | 3 | 59 | 178 | 10 | 119 | 5.95e-29 | 113 |
Msa1247140 | AT1G56010.1 | 49.138 | 116 | 43 | 3 | 62 | 173 | 1 | 104 | 8.67e-29 | 113 |
Msa1247140 | AT5G64530.2 | 43.307 | 127 | 60 | 2 | 16 | 142 | 5 | 119 | 1.19e-28 | 110 |
Msa1247140 | AT4G01550.1 | 43.284 | 134 | 72 | 3 | 15 | 144 | 5 | 138 | 2.36e-28 | 116 |
Msa1247140 | AT3G44350.1 | 38.000 | 150 | 83 | 4 | 10 | 152 | 1 | 147 | 7.18e-28 | 108 |
Msa1247140 | AT4G01520.1 | 34.737 | 190 | 102 | 7 | 17 | 201 | 7 | 179 | 8.23e-25 | 103 |
Msa1247140 | AT4G01540.3 | 41.481 | 135 | 74 | 4 | 15 | 144 | 5 | 139 | 2.30e-24 | 104 |
Msa1247140 | AT4G01540.4 | 40.411 | 146 | 79 | 5 | 15 | 155 | 5 | 147 | 3.26e-24 | 103 |
Msa1247140 | AT4G01540.2 | 41.481 | 135 | 74 | 4 | 15 | 144 | 5 | 139 | 4.26e-24 | 103 |
Msa1247140 | AT4G01540.1 | 41.481 | 135 | 74 | 4 | 15 | 144 | 5 | 139 | 4.47e-24 | 103 |
Msa1247140 | AT1G02250.1 | 35.450 | 189 | 105 | 8 | 17 | 200 | 6 | 182 | 5.61e-23 | 99.8 |
Msa1247140 | AT4G28530.2 | 38.235 | 136 | 68 | 2 | 6 | 125 | 2 | 137 | 2.05e-22 | 97.1 |
Msa1247140 | AT1G02230.1 | 38.806 | 134 | 74 | 5 | 17 | 145 | 6 | 136 | 1.15e-21 | 95.9 |
Msa1247140 | AT3G04420.2 | 38.583 | 127 | 72 | 3 | 17 | 139 | 6 | 130 | 6.30e-21 | 92.4 |
Msa1247140 | AT2G33480.3 | 42.056 | 107 | 51 | 3 | 67 | 173 | 8 | 103 | 6.91e-21 | 90.5 |
Msa1247140 | AT2G18060.2 | 47.368 | 95 | 36 | 4 | 92 | 186 | 2 | 82 | 9.99e-21 | 91.7 |
Msa1247140 | AT3G04420.1 | 38.583 | 127 | 72 | 3 | 17 | 139 | 6 | 130 | 2.25e-20 | 91.7 |
Msa1247140 | AT1G01010.1 | 28.685 | 251 | 150 | 8 | 17 | 255 | 6 | 239 | 1.91e-18 | 87.0 |
Msa1247140 | AT1G02220.1 | 37.795 | 127 | 70 | 4 | 17 | 139 | 6 | 127 | 7.94e-17 | 82.0 |
Msa1247140 | AT5G50820.1 | 36.641 | 131 | 71 | 5 | 16 | 143 | 19 | 140 | 7.55e-16 | 75.9 |
Msa1247140 | AT3G04430.1 | 36.842 | 133 | 70 | 5 | 20 | 140 | 6 | 136 | 3.19e-15 | 74.3 |
Msa1247140 | AT5G14000.2 | 31.579 | 133 | 85 | 3 | 17 | 147 | 18 | 146 | 1.20e-14 | 71.6 |
Msa1247140 | AT5G14000.1 | 27.108 | 166 | 103 | 4 | 17 | 180 | 18 | 167 | 1.45e-14 | 72.4 |
Msa1247140 | AT3G56530.1 | 30.189 | 159 | 95 | 5 | 16 | 171 | 54 | 199 | 2.93e-14 | 73.6 |
Msa1247140 | AT3G10490.4 | 38.202 | 89 | 45 | 3 | 87 | 175 | 2 | 80 | 8.11e-14 | 72.4 |
Msa1247140 | AT3G10490.3 | 38.202 | 89 | 45 | 3 | 87 | 175 | 2 | 80 | 8.11e-14 | 72.4 |
Msa1247140 | AT5G22290.2 | 36.957 | 92 | 38 | 3 | 93 | 181 | 2 | 76 | 4.99e-12 | 65.9 |
Find 96 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAATCAATGGATCAATAAT+TGG | 0.177383 | 8_2:+39628496 | None:intergenic |
CAATAATGGGTATCCTTTAA+TGG | 0.214887 | 8_2:-39628290 | Msa1247140:CDS |
TGAAATTGGTAACCGGTATA+AGG | 0.232151 | 8_2:+39628468 | None:intergenic |
TTAGGAATGTTAGCCATTAA+AGG | 0.250176 | 8_2:+39628277 | None:intergenic |
GTCTTGTCTACATATTTCTT+TGG | 0.251750 | 8_2:+39629433 | None:intergenic |
CCAGCTCTTGTTACCCTATT+AGG | 0.256540 | 8_2:+39629628 | None:intergenic |
TCATGTTTGAGGAACAAAAT+TGG | 0.264318 | 8_2:+39628650 | None:intergenic |
CTTGAAGAGGTTATGCTTCC+AGG | 0.267006 | 8_2:-39630498 | Msa1247140:CDS |
AGATCTTGATCATTTGAAAT+TGG | 0.267969 | 8_2:+39628454 | None:intergenic |
TTACAAGACCATTACAATAA+TGG | 0.289925 | 8_2:-39628304 | Msa1247140:CDS |
ATTATAAGATGGAACATCTA+AGG | 0.299587 | 8_2:+39628522 | None:intergenic |
TACAAGACCATTACAATAAT+GGG | 0.299937 | 8_2:-39628303 | Msa1247140:CDS |
TTCCTGTACTTTCTGTCTCT+TGG | 0.313082 | 8_2:+39629661 | None:intergenic |
GGAACAGTGCAAGACCTAAT+AGG | 0.314506 | 8_2:-39629642 | Msa1247140:CDS |
GGGTAACAAGAGCTGGGTTT+TGG | 0.314918 | 8_2:-39629621 | Msa1247140:CDS |
TATTCAACTTGTAGGAATCT+TGG | 0.319905 | 8_2:-39628795 | Msa1247140:intron |
GGAAGTCATCAAGTCTTGTT+TGG | 0.319913 | 8_2:-39628159 | Msa1247140:CDS |
AGGTTATGCTTCCAGGGTTT+AGG | 0.326370 | 8_2:-39630491 | Msa1247140:CDS |
TTCAGTGTGCCTCTCAATAT+TGG | 0.343215 | 8_2:-39628190 | Msa1247140:CDS |
CCAACTGATGAAGAACTTGT+TGG | 0.382953 | 8_2:-39630462 | Msa1247140:CDS |
GAACCCTCTGAGGAATAAAT+AGG | 0.385421 | 8_2:+39629577 | None:intergenic |
GAAATTGGTAACCGGTATAA+GGG | 0.389296 | 8_2:+39628469 | None:intergenic |
TGTATAGAGTTGGCAAGTAC+AGG | 0.404014 | 8_2:-39629709 | Msa1247140:intron |
CTTTGTTAACATCATGTTTG+AGG | 0.406276 | 8_2:+39628639 | None:intergenic |
TCAGAGGGTTCTAAGTGTAT+TGG | 0.407108 | 8_2:-39629565 | Msa1247140:CDS |
AAGAGGTTAAGTGTTGTGTT+AGG | 0.408400 | 8_2:+39628566 | None:intergenic |
ACACGAGGCACGTTCACATT+AGG | 0.418344 | 8_2:+39628259 | None:intergenic |
ATTCAACTTGTAGGAATCTT+GGG | 0.422352 | 8_2:-39628794 | Msa1247140:intron |
GAAGTCATCAAGTCTTGTTT+GGG | 0.428653 | 8_2:-39628158 | Msa1247140:CDS |
TACTACCAAGTGTTATACTT+AGG | 0.432517 | 8_2:-39628095 | None:intergenic |
GATCATTTGAAATTGGTAAC+CGG | 0.434751 | 8_2:+39628461 | None:intergenic |
ACTACCAAGTGTTATACTTA+GGG | 0.437461 | 8_2:-39628094 | None:intergenic |
TCCAATGTTCTAACAAATGA+TGG | 0.437494 | 8_2:-39628682 | Msa1247140:CDS |
TCTACCTTTGTAGAAAACTA+AGG | 0.437881 | 8_2:+39629531 | None:intergenic |
AAGGATACCCATTATTGTAA+TGG | 0.438786 | 8_2:+39628296 | None:intergenic |
GAACAGTGCAAGACCTAATA+GGG | 0.447391 | 8_2:-39629641 | Msa1247140:CDS |
TTGGATTCGGTTCGACCCAT+TGG | 0.448114 | 8_2:-39628220 | Msa1247140:CDS |
AGCTCTTTGAGCTGTTGCAT+TGG | 0.449839 | 8_2:+39628747 | None:intergenic |
ATAATTGGATTATTATAAGA+TGG | 0.450751 | 8_2:+39628511 | None:intergenic |
GAGGTTGATGTTTCAAGTAA+AGG | 0.459077 | 8_2:+39628703 | None:intergenic |
CCTAATAGGGTAACAAGAGC+TGG | 0.463143 | 8_2:-39629628 | Msa1247140:CDS |
TATAAGGGTTTGTAAATCAA+TGG | 0.465297 | 8_2:+39628484 | None:intergenic |
ATATGTAGACAAGACCATTC+CGG | 0.469723 | 8_2:-39629425 | Msa1247140:CDS |
CCAAAGGAGTCAAAACTGAT+TGG | 0.471412 | 8_2:-39629504 | Msa1247140:CDS |
TAGGATATGGAAGAGAGAAA+TGG | 0.474701 | 8_2:-39630531 | None:intergenic |
ATATTTATAAATTTGATCCA+TGG | 0.478110 | 8_2:-39630377 | Msa1247140:CDS |
ATCATTTGTTAGAACATTGG+AGG | 0.481008 | 8_2:+39628684 | None:intergenic |
TGATCAACAAGAGTTGGATT+CGG | 0.482818 | 8_2:-39628233 | Msa1247140:CDS |
AAAGAGCTCTCTCTCACTCA+TGG | 0.486372 | 8_2:-39628732 | Msa1247140:CDS |
TATTTATAAATTTGATCCAT+GGG | 0.487821 | 8_2:-39630376 | Msa1247140:CDS |
CCAACAAGTTCTTCATCAGT+TGG | 0.490455 | 8_2:+39630462 | None:intergenic |
TGTTGATGATCAACAAGAGT+TGG | 0.491292 | 8_2:-39628239 | Msa1247140:CDS |
ATATTGAGAGGCACACTGAA+TGG | 0.495510 | 8_2:+39628193 | None:intergenic |
ATCATGTAACAAAACTTCAA+TGG | 0.495840 | 8_2:-39628389 | Msa1247140:CDS |
TCCATCATTTGTTAGAACAT+TGG | 0.496772 | 8_2:+39628681 | None:intergenic |
TTTACTTACATTGGCCGGAA+TGG | 0.497789 | 8_2:+39629411 | None:intergenic |
TGATTTACAAACCCTTATAC+CGG | 0.505584 | 8_2:-39628480 | Msa1247140:CDS |
CTCTCAATATTGGTGATGCT+TGG | 0.505647 | 8_2:-39628180 | Msa1247140:CDS |
TATTGAGAGGCACACTGAAT+GGG | 0.507464 | 8_2:+39628194 | None:intergenic |
GTCTTACTTGGTAGATCCCA+TGG | 0.514805 | 8_2:+39630360 | None:intergenic |
AGGAATCTTGGGCAATATGC+AGG | 0.518840 | 8_2:-39628783 | Msa1247140:CDS |
TTGAAGAGGTTATGCTTCCA+GGG | 0.523265 | 8_2:-39630497 | Msa1247140:CDS |
AGTGTTGTGTTAGGTTATTG+TGG | 0.533214 | 8_2:+39628575 | None:intergenic |
CTAGAGTGACTCGCAAAGCT+AGG | 0.543852 | 8_2:+39628613 | None:intergenic |
TTGAGGAACAAAATTGGTTG+TGG | 0.548581 | 8_2:+39628656 | None:intergenic |
GATGATGAATCTATGAGAGA+AGG | 0.549029 | 8_2:+39629460 | None:intergenic |
TTGTTACATGATGTTTCAAG+AGG | 0.556658 | 8_2:+39628400 | None:intergenic |
AGACCTATTTATTCCTCAGA+GGG | 0.557263 | 8_2:-39629580 | Msa1247140:CDS |
CAAGATCTTAACCTTAGCAC+TGG | 0.557408 | 8_2:-39628439 | Msa1247140:CDS |
ACACTGAATGGGAATCCAAT+GGG | 0.562023 | 8_2:+39628205 | None:intergenic |
AAGTGTAGTACTACTAGAAG+AGG | 0.565912 | 8_2:+39628549 | None:intergenic |
GTATAGAGTTGGCAAGTACA+GGG | 0.573043 | 8_2:-39629708 | Msa1247140:intron |
AAGAGCTCTCTCTCACTCAT+GGG | 0.573676 | 8_2:-39628731 | Msa1247140:CDS |
TTATAAGATGGAACATCTAA+GGG | 0.574187 | 8_2:+39628523 | None:intergenic |
GGGTTCATCAGAAGTACAAG+AGG | 0.581707 | 8_2:+39628129 | None:intergenic |
CACACTGAATGGGAATCCAA+TGG | 0.582826 | 8_2:+39628204 | None:intergenic |
CAAGTACAGGGGAGAAAGAG+TGG | 0.591955 | 8_2:-39629696 | Msa1247140:CDS |
CTAATAGGGTAACAAGAGCT+GGG | 0.601926 | 8_2:-39629627 | Msa1247140:CDS |
GTTGATGTTTCAAGTAAAGG+AGG | 0.607067 | 8_2:+39628706 | None:intergenic |
CAGACCTATTTATTCCTCAG+AGG | 0.608250 | 8_2:-39629581 | Msa1247140:CDS |
GGTCTTGTAAATTACCAATG+TGG | 0.608477 | 8_2:+39628317 | None:intergenic |
GTCCAAGAGACAGAAAGTAC+AGG | 0.615144 | 8_2:-39629663 | Msa1247140:CDS |
AGAATACTAAGCCAGTGCTA+AGG | 0.618095 | 8_2:+39628428 | None:intergenic |
GTTGGATGAAACCTAAACCC+TGG | 0.628808 | 8_2:+39630480 | None:intergenic |
TTGATGAGCTCAATAGCAAG+AGG | 0.641698 | 8_2:+39630408 | None:intergenic |
TGGTTGTGAGAAACTTGAAG+AGG | 0.645223 | 8_2:-39630511 | Msa1247140:CDS |
CAAGCATCACCAATATTGAG+AGG | 0.656480 | 8_2:+39628181 | None:intergenic |
CTTGGTAGTAGAATAACTAG+AGG | 0.660558 | 8_2:+39628108 | None:intergenic |
TACAAAGGTAGAGCTGCCAA+AGG | 0.667663 | 8_2:-39629520 | Msa1247140:CDS |
GTAACAACTTCAAACCACAT+TGG | 0.667828 | 8_2:-39628331 | Msa1247140:CDS |
TAAACCCTAAGTATAACACT+TGG | 0.675221 | 8_2:+39628090 | None:intergenic |
TGATGAGCTCAATAGCAAGA+GGG | 0.682356 | 8_2:+39630409 | None:intergenic |
TATAGAGTTGGCAAGTACAG+GGG | 0.692122 | 8_2:-39629707 | Msa1247140:intron |
TTGGTAGTAGAATAACTAGA+GGG | 0.705649 | 8_2:+39628109 | None:intergenic |
AATACACTTAGAACCCTCTG+AGG | 0.742862 | 8_2:+39629567 | None:intergenic |
TCTTGTTGATCATCAACACG+AGG | 0.747637 | 8_2:+39628244 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAGATATATAAGAAATTA+GGG | - | chr8_2:39629614-39629633 | Msa1247140:CDS | 10.0% |
!! | AATAGATATATAAGAAATTA+GGG | - | chr8_2:39629614-39629633 | Msa1247140:CDS | 10.0% |
!! | ATATTTATAAATTTGATCCA+TGG | - | chr8_2:39628244-39628263 | Msa1247140:CDS | 15.0% |
!! | TATTTATAAATTTGATCCAT+GGG | - | chr8_2:39628245-39628264 | Msa1247140:CDS | 15.0% |
!! | TTCAAACTAAATATAGATTT+GGG | + | chr8_2:39629243-39629262 | None:intergenic | 15.0% |
!!! | CATATACTTTTTTTTTAACA+AGG | + | chr8_2:39629323-39629342 | None:intergenic | 15.0% |
!! | GAATAGATATATAAGAAATT+AGG | - | chr8_2:39629613-39629632 | Msa1247140:CDS | 15.0% |
!!! | GTAATTATTTTTTTAACAAG+TGG | + | chr8_2:39629745-39629764 | None:intergenic | 15.0% |
!! | ATAATTGGATTATTATAAGA+TGG | + | chr8_2:39630113-39630132 | None:intergenic | 15.0% |
!! | ATATTTATAAATTTGATCCA+TGG | - | chr8_2:39628244-39628263 | Msa1247140:CDS | 15.0% |
!! | TATTTATAAATTTGATCCAT+GGG | - | chr8_2:39628245-39628264 | Msa1247140:CDS | 15.0% |
!! | TTCAAACTAAATATAGATTT+GGG | + | chr8_2:39629243-39629262 | None:intergenic | 15.0% |
!!! | CATATACTTTTTTTTTAACA+AGG | + | chr8_2:39629323-39629342 | None:intergenic | 15.0% |
!! | GAATAGATATATAAGAAATT+AGG | - | chr8_2:39629613-39629632 | Msa1247140:CDS | 15.0% |
!!! | GTAATTATTTTTTTAACAAG+TGG | + | chr8_2:39629745-39629764 | None:intergenic | 15.0% |
!! | ATAATTGGATTATTATAAGA+TGG | + | chr8_2:39630113-39630132 | None:intergenic | 15.0% |
!! | TAAAAAGTAAAGTGATAAAG+AGG | + | chr8_2:39628370-39628389 | None:intergenic | 20.0% |
!! | TATATGTAAGTTACACATAT+AGG | + | chr8_2:39628436-39628455 | None:intergenic | 20.0% |
!! | GTTCAAACTAAATATAGATT+TGG | + | chr8_2:39629244-39629263 | None:intergenic | 20.0% |
!!! | TATATTTAGTTTGAACTTGT+TGG | - | chr8_2:39629248-39629267 | Msa1247140:intron | 20.0% |
!!! | TTTTATAGATCTTGTTAGAA+TGG | - | chr8_2:39629276-39629295 | Msa1247140:intron | 20.0% |
!! | TAAATCAATGGATCAATAAT+TGG | + | chr8_2:39630128-39630147 | None:intergenic | 20.0% |
!! | TAAAAAGTAAAGTGATAAAG+AGG | + | chr8_2:39628370-39628389 | None:intergenic | 20.0% |
!! | TATATGTAAGTTACACATAT+AGG | + | chr8_2:39628436-39628455 | None:intergenic | 20.0% |
!! | GTTCAAACTAAATATAGATT+TGG | + | chr8_2:39629244-39629263 | None:intergenic | 20.0% |
!!! | TATATTTAGTTTGAACTTGT+TGG | - | chr8_2:39629248-39629267 | Msa1247140:intron | 20.0% |
!!! | TTTTATAGATCTTGTTAGAA+TGG | - | chr8_2:39629276-39629295 | Msa1247140:intron | 20.0% |
!! | TAAATCAATGGATCAATAAT+TGG | + | chr8_2:39630128-39630147 | None:intergenic | 20.0% |
!! | GTTAAGACTTTTTGATATCT+TGG | - | chr8_2:39628851-39628870 | Msa1247140:intron | 25.0% |
!! | TGATATTTTGTGTATAGAGT+TGG | - | chr8_2:39628902-39628921 | Msa1247140:intron | 25.0% |
!!! | AAATCCTTAGTTTTCTACAA+AGG | - | chr8_2:39629086-39629105 | Msa1247140:intron | 25.0% |
!! | GGAAGTAATTTTACTTACAT+TGG | + | chr8_2:39629222-39629241 | None:intergenic | 25.0% |
! | CATTTGACAAATAATCAAGT+AGG | - | chr8_2:39629387-39629406 | Msa1247140:intron | 25.0% |
! | GTATAAGATGAGTAAAGTTA+TGG | - | chr8_2:39629415-39629434 | Msa1247140:intron | 25.0% |
! | ATGAGTAAAGTTATGGTATT+TGG | - | chr8_2:39629422-39629441 | Msa1247140:CDS | 25.0% |
!! | TATCACATCACTCTATTTTA+AGG | + | chr8_2:39629536-39629555 | None:intergenic | 25.0% |
! | TTAAATGCTATTCAACTTGT+AGG | - | chr8_2:39629818-39629837 | Msa1247140:intron | 25.0% |
! | TTATAAGATGGAACATCTAA+GGG | + | chr8_2:39630101-39630120 | None:intergenic | 25.0% |
! | ATTATAAGATGGAACATCTA+AGG | + | chr8_2:39630102-39630121 | None:intergenic | 25.0% |
! | TATAAGGGTTTGTAAATCAA+TGG | + | chr8_2:39630140-39630159 | None:intergenic | 25.0% |
!! | AGATCTTGATCATTTGAAAT+TGG | + | chr8_2:39630170-39630189 | None:intergenic | 25.0% |
! | ATCATGTAACAAAACTTCAA+TGG | - | chr8_2:39630232-39630251 | Msa1247140:intron | 25.0% |
!!! | GATTTTTCTTCTTTGCTATT+AGG | - | chr8_2:39630254-39630273 | Msa1247140:intron | 25.0% |
! | TTACAAGACCATTACAATAA+TGG | - | chr8_2:39630317-39630336 | Msa1247140:intron | 25.0% |
! | TACAAGACCATTACAATAAT+GGG | - | chr8_2:39630318-39630337 | Msa1247140:intron | 25.0% |
!! | GTTAAGACTTTTTGATATCT+TGG | - | chr8_2:39628851-39628870 | Msa1247140:intron | 25.0% |
!! | TGATATTTTGTGTATAGAGT+TGG | - | chr8_2:39628902-39628921 | Msa1247140:intron | 25.0% |
!!! | AAATCCTTAGTTTTCTACAA+AGG | - | chr8_2:39629086-39629105 | Msa1247140:intron | 25.0% |
!! | GGAAGTAATTTTACTTACAT+TGG | + | chr8_2:39629222-39629241 | None:intergenic | 25.0% |
! | CATTTGACAAATAATCAAGT+AGG | - | chr8_2:39629387-39629406 | Msa1247140:intron | 25.0% |
! | GTATAAGATGAGTAAAGTTA+TGG | - | chr8_2:39629415-39629434 | Msa1247140:intron | 25.0% |
! | ATGAGTAAAGTTATGGTATT+TGG | - | chr8_2:39629422-39629441 | Msa1247140:CDS | 25.0% |
!! | TATCACATCACTCTATTTTA+AGG | + | chr8_2:39629536-39629555 | None:intergenic | 25.0% |
! | TTAAATGCTATTCAACTTGT+AGG | - | chr8_2:39629818-39629837 | Msa1247140:intron | 25.0% |
! | TTATAAGATGGAACATCTAA+GGG | + | chr8_2:39630101-39630120 | None:intergenic | 25.0% |
! | ATTATAAGATGGAACATCTA+AGG | + | chr8_2:39630102-39630121 | None:intergenic | 25.0% |
! | TATAAGGGTTTGTAAATCAA+TGG | + | chr8_2:39630140-39630159 | None:intergenic | 25.0% |
!! | AGATCTTGATCATTTGAAAT+TGG | + | chr8_2:39630170-39630189 | None:intergenic | 25.0% |
! | ATCATGTAACAAAACTTCAA+TGG | - | chr8_2:39630232-39630251 | Msa1247140:intron | 25.0% |
!!! | GATTTTTCTTCTTTGCTATT+AGG | - | chr8_2:39630254-39630273 | Msa1247140:intron | 25.0% |
! | TTACAAGACCATTACAATAA+TGG | - | chr8_2:39630317-39630336 | Msa1247140:intron | 25.0% |
! | TACAAGACCATTACAATAAT+GGG | - | chr8_2:39630318-39630337 | Msa1247140:intron | 25.0% |
! | GTTGCTGAATCTTTTTCTTT+AGG | + | chr8_2:39628191-39628210 | None:intergenic | 30.0% |
CAAAGTGATAAACACATCTA+GGG | + | chr8_2:39628317-39628336 | None:intergenic | 30.0% | |
TCAAAGTGATAAACACATCT+AGG | + | chr8_2:39628318-39628337 | None:intergenic | 30.0% | |
TAAGTTACACATATAGGTAG+GGG | + | chr8_2:39628430-39628449 | None:intergenic | 30.0% | |
GTAAGTTACACATATAGGTA+GGG | + | chr8_2:39628431-39628450 | None:intergenic | 30.0% | |
TGTAAGTTACACATATAGGT+AGG | + | chr8_2:39628432-39628451 | None:intergenic | 30.0% | |
TGTGAAAACAATTTCTGACA+TGG | - | chr8_2:39628531-39628550 | Msa1247140:CDS | 30.0% | |
TTATCCAAACATCGTACTAT+AGG | - | chr8_2:39628819-39628838 | Msa1247140:intron | 30.0% | |
TCTACCTTTGTAGAAAACTA+AGG | + | chr8_2:39629093-39629112 | None:intergenic | 30.0% | |
GTCTTGTCTACATATTTCTT+TGG | + | chr8_2:39629191-39629210 | None:intergenic | 30.0% | |
! | GTAATTTTACTTACATTGGC+CGG | + | chr8_2:39629218-39629237 | None:intergenic | 30.0% |
GTTATGGTATTTGGATTATC+CGG | - | chr8_2:39629431-39629450 | Msa1247140:CDS | 30.0% | |
TAACCTAAAATGCACTTAGT+CGG | - | chr8_2:39629456-39629475 | Msa1247140:CDS | 30.0% | |
! | AGAAAACAATCGAGTCATTT+TGG | + | chr8_2:39629695-39629714 | None:intergenic | 30.0% |
! | AAAATGACTCGATTGTTTTC+TGG | - | chr8_2:39629694-39629713 | Msa1247140:CDS | 30.0% |
TATTCAACTTGTAGGAATCT+TGG | - | chr8_2:39629826-39629845 | Msa1247140:intron | 30.0% | |
ATTCAACTTGTAGGAATCTT+GGG | - | chr8_2:39629827-39629846 | Msa1247140:intron | 30.0% | |
! | ATCATTTGTTAGAACATTGG+AGG | + | chr8_2:39629940-39629959 | None:intergenic | 30.0% |
TCCAATGTTCTAACAAATGA+TGG | - | chr8_2:39629939-39629958 | Msa1247140:intron | 30.0% | |
! | TCCATCATTTGTTAGAACAT+TGG | + | chr8_2:39629943-39629962 | None:intergenic | 30.0% |
TCATGTTTGAGGAACAAAAT+TGG | + | chr8_2:39629974-39629993 | None:intergenic | 30.0% | |
CTTTGTTAACATCATGTTTG+AGG | + | chr8_2:39629985-39630004 | None:intergenic | 30.0% | |
TGATTTACAAACCCTTATAC+CGG | - | chr8_2:39630141-39630160 | Msa1247140:intron | 30.0% | |
! | GATCATTTGAAATTGGTAAC+CGG | + | chr8_2:39630163-39630182 | None:intergenic | 30.0% |
TTGTTACATGATGTTTCAAG+AGG | + | chr8_2:39630224-39630243 | None:intergenic | 30.0% | |
AAGGATACCCATTATTGTAA+TGG | + | chr8_2:39630328-39630347 | None:intergenic | 30.0% | |
!! | CAATAATGGGTATCCTTTAA+TGG | - | chr8_2:39630331-39630350 | Msa1247140:intron | 30.0% |
TTAGGAATGTTAGCCATTAA+AGG | + | chr8_2:39630347-39630366 | None:intergenic | 30.0% | |
! | TTGGTAGTAGAATAACTAGA+GGG | + | chr8_2:39630515-39630534 | None:intergenic | 30.0% |
! | GTTGCTGAATCTTTTTCTTT+AGG | + | chr8_2:39628191-39628210 | None:intergenic | 30.0% |
CAAAGTGATAAACACATCTA+GGG | + | chr8_2:39628317-39628336 | None:intergenic | 30.0% | |
TCAAAGTGATAAACACATCT+AGG | + | chr8_2:39628318-39628337 | None:intergenic | 30.0% | |
TAAGTTACACATATAGGTAG+GGG | + | chr8_2:39628430-39628449 | None:intergenic | 30.0% | |
GTAAGTTACACATATAGGTA+GGG | + | chr8_2:39628431-39628450 | None:intergenic | 30.0% | |
TGTAAGTTACACATATAGGT+AGG | + | chr8_2:39628432-39628451 | None:intergenic | 30.0% | |
TGTGAAAACAATTTCTGACA+TGG | - | chr8_2:39628531-39628550 | Msa1247140:CDS | 30.0% | |
TTATCCAAACATCGTACTAT+AGG | - | chr8_2:39628819-39628838 | Msa1247140:intron | 30.0% | |
TCTACCTTTGTAGAAAACTA+AGG | + | chr8_2:39629093-39629112 | None:intergenic | 30.0% | |
GTCTTGTCTACATATTTCTT+TGG | + | chr8_2:39629191-39629210 | None:intergenic | 30.0% | |
! | GTAATTTTACTTACATTGGC+CGG | + | chr8_2:39629218-39629237 | None:intergenic | 30.0% |
GTTATGGTATTTGGATTATC+CGG | - | chr8_2:39629431-39629450 | Msa1247140:CDS | 30.0% | |
TAACCTAAAATGCACTTAGT+CGG | - | chr8_2:39629456-39629475 | Msa1247140:CDS | 30.0% | |
! | AGAAAACAATCGAGTCATTT+TGG | + | chr8_2:39629695-39629714 | None:intergenic | 30.0% |
! | AAAATGACTCGATTGTTTTC+TGG | - | chr8_2:39629694-39629713 | Msa1247140:CDS | 30.0% |
TATTCAACTTGTAGGAATCT+TGG | - | chr8_2:39629826-39629845 | Msa1247140:intron | 30.0% | |
ATTCAACTTGTAGGAATCTT+GGG | - | chr8_2:39629827-39629846 | Msa1247140:intron | 30.0% | |
! | ATCATTTGTTAGAACATTGG+AGG | + | chr8_2:39629940-39629959 | None:intergenic | 30.0% |
TCCAATGTTCTAACAAATGA+TGG | - | chr8_2:39629939-39629958 | Msa1247140:intron | 30.0% | |
! | TCCATCATTTGTTAGAACAT+TGG | + | chr8_2:39629943-39629962 | None:intergenic | 30.0% |
TCATGTTTGAGGAACAAAAT+TGG | + | chr8_2:39629974-39629993 | None:intergenic | 30.0% | |
CTTTGTTAACATCATGTTTG+AGG | + | chr8_2:39629985-39630004 | None:intergenic | 30.0% | |
TGATTTACAAACCCTTATAC+CGG | - | chr8_2:39630141-39630160 | Msa1247140:intron | 30.0% | |
! | GATCATTTGAAATTGGTAAC+CGG | + | chr8_2:39630163-39630182 | None:intergenic | 30.0% |
TTGTTACATGATGTTTCAAG+AGG | + | chr8_2:39630224-39630243 | None:intergenic | 30.0% | |
AAGGATACCCATTATTGTAA+TGG | + | chr8_2:39630328-39630347 | None:intergenic | 30.0% | |
!! | CAATAATGGGTATCCTTTAA+TGG | - | chr8_2:39630331-39630350 | Msa1247140:intron | 30.0% |
TTAGGAATGTTAGCCATTAA+AGG | + | chr8_2:39630347-39630366 | None:intergenic | 30.0% | |
! | TTGGTAGTAGAATAACTAGA+GGG | + | chr8_2:39630515-39630534 | None:intergenic | 30.0% |
GCACTATTATGAGTCTTACT+TGG | + | chr8_2:39628276-39628295 | None:intergenic | 35.0% | |
GTGATAAAGAGGTCAAATAC+TGG | + | chr8_2:39628359-39628378 | None:intergenic | 35.0% | |
GATATAAGTTTCGCTTAACG+TGG | + | chr8_2:39628408-39628427 | None:intergenic | 35.0% | |
ACAATTTCTGACATGGACAT+AGG | - | chr8_2:39628538-39628557 | Msa1247140:CDS | 35.0% | |
ACTACCTATAGTACGATGTT+TGG | + | chr8_2:39628826-39628845 | None:intergenic | 35.0% | |
AGACCTATTTATTCCTCAGA+GGG | - | chr8_2:39629041-39629060 | Msa1247140:intron | 35.0% | |
GATGATGAATCTATGAGAGA+AGG | + | chr8_2:39629164-39629183 | None:intergenic | 35.0% | |
ATATGTAGACAAGACCATTC+CGG | - | chr8_2:39629196-39629215 | Msa1247140:intron | 35.0% | |
!!! | AAGTGCATTTTAGGTTAGAC+CGG | + | chr8_2:39629453-39629472 | None:intergenic | 35.0% |
! | AATCCGACTAAGTGCATTTT+AGG | + | chr8_2:39629462-39629481 | None:intergenic | 35.0% |
TGTGGTGCACACAAAAAATT+AGG | + | chr8_2:39629498-39629517 | None:intergenic | 35.0% | |
! | GTTGATGTTTCAAGTAAAGG+AGG | + | chr8_2:39629918-39629937 | None:intergenic | 35.0% |
!! | GAGGTTGATGTTTCAAGTAA+AGG | + | chr8_2:39629921-39629940 | None:intergenic | 35.0% |
TTGAGGAACAAAATTGGTTG+TGG | + | chr8_2:39629968-39629987 | None:intergenic | 35.0% | |
AGTGTTGTGTTAGGTTATTG+TGG | + | chr8_2:39630049-39630068 | None:intergenic | 35.0% | |
! | AAGAGGTTAAGTGTTGTGTT+AGG | + | chr8_2:39630058-39630077 | None:intergenic | 35.0% |
AAGTGTAGTACTACTAGAAG+AGG | + | chr8_2:39630075-39630094 | None:intergenic | 35.0% | |
! | GAAATTGGTAACCGGTATAA+GGG | + | chr8_2:39630155-39630174 | None:intergenic | 35.0% |
! | TGAAATTGGTAACCGGTATA+AGG | + | chr8_2:39630156-39630175 | None:intergenic | 35.0% |
GTAACAACTTCAAACCACAT+TGG | - | chr8_2:39630290-39630309 | Msa1247140:intron | 35.0% | |
! | GGTCTTGTAAATTACCAATG+TGG | + | chr8_2:39630307-39630326 | None:intergenic | 35.0% |
!! | TGTTGATGATCAACAAGAGT+TGG | - | chr8_2:39630382-39630401 | Msa1247140:CDS | 35.0% |
TGATCAACAAGAGTTGGATT+CGG | - | chr8_2:39630388-39630407 | Msa1247140:CDS | 35.0% | |
!! | GAAGTCATCAAGTCTTGTTT+GGG | - | chr8_2:39630463-39630482 | Msa1247140:CDS | 35.0% |
! | CTTGGTAGTAGAATAACTAG+AGG | + | chr8_2:39630516-39630535 | None:intergenic | 35.0% |
GCACTATTATGAGTCTTACT+TGG | + | chr8_2:39628276-39628295 | None:intergenic | 35.0% | |
GTGATAAAGAGGTCAAATAC+TGG | + | chr8_2:39628359-39628378 | None:intergenic | 35.0% | |
GATATAAGTTTCGCTTAACG+TGG | + | chr8_2:39628408-39628427 | None:intergenic | 35.0% | |
ACAATTTCTGACATGGACAT+AGG | - | chr8_2:39628538-39628557 | Msa1247140:CDS | 35.0% | |
ACTACCTATAGTACGATGTT+TGG | + | chr8_2:39628826-39628845 | None:intergenic | 35.0% | |
AGACCTATTTATTCCTCAGA+GGG | - | chr8_2:39629041-39629060 | Msa1247140:intron | 35.0% | |
GATGATGAATCTATGAGAGA+AGG | + | chr8_2:39629164-39629183 | None:intergenic | 35.0% | |
ATATGTAGACAAGACCATTC+CGG | - | chr8_2:39629196-39629215 | Msa1247140:intron | 35.0% | |
!!! | AAGTGCATTTTAGGTTAGAC+CGG | + | chr8_2:39629453-39629472 | None:intergenic | 35.0% |
! | AATCCGACTAAGTGCATTTT+AGG | + | chr8_2:39629462-39629481 | None:intergenic | 35.0% |
TGTGGTGCACACAAAAAATT+AGG | + | chr8_2:39629498-39629517 | None:intergenic | 35.0% | |
! | GTTGATGTTTCAAGTAAAGG+AGG | + | chr8_2:39629918-39629937 | None:intergenic | 35.0% |
!! | GAGGTTGATGTTTCAAGTAA+AGG | + | chr8_2:39629921-39629940 | None:intergenic | 35.0% |
TTGAGGAACAAAATTGGTTG+TGG | + | chr8_2:39629968-39629987 | None:intergenic | 35.0% | |
AGTGTTGTGTTAGGTTATTG+TGG | + | chr8_2:39630049-39630068 | None:intergenic | 35.0% | |
! | AAGAGGTTAAGTGTTGTGTT+AGG | + | chr8_2:39630058-39630077 | None:intergenic | 35.0% |
AAGTGTAGTACTACTAGAAG+AGG | + | chr8_2:39630075-39630094 | None:intergenic | 35.0% | |
! | GAAATTGGTAACCGGTATAA+GGG | + | chr8_2:39630155-39630174 | None:intergenic | 35.0% |
! | TGAAATTGGTAACCGGTATA+AGG | + | chr8_2:39630156-39630175 | None:intergenic | 35.0% |
GTAACAACTTCAAACCACAT+TGG | - | chr8_2:39630290-39630309 | Msa1247140:intron | 35.0% | |
! | GGTCTTGTAAATTACCAATG+TGG | + | chr8_2:39630307-39630326 | None:intergenic | 35.0% |
!! | TGTTGATGATCAACAAGAGT+TGG | - | chr8_2:39630382-39630401 | Msa1247140:CDS | 35.0% |
TGATCAACAAGAGTTGGATT+CGG | - | chr8_2:39630388-39630407 | Msa1247140:CDS | 35.0% | |
!! | GAAGTCATCAAGTCTTGTTT+GGG | - | chr8_2:39630463-39630482 | Msa1247140:CDS | 35.0% |
! | CTTGGTAGTAGAATAACTAG+AGG | + | chr8_2:39630516-39630535 | None:intergenic | 35.0% |
TGGTTGTGAGAAACTTGAAG+AGG | - | chr8_2:39628110-39628129 | Msa1247140:CDS | 40.0% | |
TTGAAGAGGTTATGCTTCCA+GGG | - | chr8_2:39628124-39628143 | Msa1247140:CDS | 40.0% | |
CCAACAAGTTCTTCATCAGT+TGG | + | chr8_2:39628162-39628181 | None:intergenic | 40.0% | |
CCAACTGATGAAGAACTTGT+TGG | - | chr8_2:39628159-39628178 | Msa1247140:CDS | 40.0% | |
TGATGAGCTCAATAGCAAGA+GGG | + | chr8_2:39628215-39628234 | None:intergenic | 40.0% | |
TTGATGAGCTCAATAGCAAG+AGG | + | chr8_2:39628216-39628235 | None:intergenic | 40.0% | |
TGTATAGAGTTGGCAAGTAC+AGG | - | chr8_2:39628912-39628931 | Msa1247140:intron | 40.0% | |
GTATAGAGTTGGCAAGTACA+GGG | - | chr8_2:39628913-39628932 | Msa1247140:intron | 40.0% | |
TATAGAGTTGGCAAGTACAG+GGG | - | chr8_2:39628914-39628933 | Msa1247140:intron | 40.0% | |
TTCCTGTACTTTCTGTCTCT+TGG | + | chr8_2:39628963-39628982 | None:intergenic | 40.0% | |
GAACAGTGCAAGACCTAATA+GGG | - | chr8_2:39628980-39628999 | Msa1247140:intron | 40.0% | |
CTAATAGGGTAACAAGAGCT+GGG | - | chr8_2:39628994-39629013 | Msa1247140:intron | 40.0% | |
CAGACCTATTTATTCCTCAG+AGG | - | chr8_2:39629040-39629059 | Msa1247140:intron | 40.0% | |
! | GAACCCTCTGAGGAATAAAT+AGG | + | chr8_2:39629047-39629066 | None:intergenic | 40.0% |
AATACACTTAGAACCCTCTG+AGG | + | chr8_2:39629057-39629076 | None:intergenic | 40.0% | |
!! | TCAGAGGGTTCTAAGTGTAT+TGG | - | chr8_2:39629056-39629075 | Msa1247140:intron | 40.0% |
!!! | CCAATCAGTTTTGACTCCTT+TGG | + | chr8_2:39629120-39629139 | None:intergenic | 40.0% |
CCAAAGGAGTCAAAACTGAT+TGG | - | chr8_2:39629117-39629136 | Msa1247140:intron | 40.0% | |
TTTACTTACATTGGCCGGAA+TGG | + | chr8_2:39629213-39629232 | None:intergenic | 40.0% | |
!!! | TTTTTTGTGTGCACCACATG+TGG | - | chr8_2:39629500-39629519 | Msa1247140:CDS | 40.0% |
! | TTTTTGTGTGCACCACATGT+GGG | - | chr8_2:39629501-39629520 | Msa1247140:CDS | 40.0% |
CAAGATCTTAACCTTAGCAC+TGG | - | chr8_2:39630182-39630201 | Msa1247140:intron | 40.0% | |
AGAATACTAAGCCAGTGCTA+AGG | + | chr8_2:39630196-39630215 | None:intergenic | 40.0% | |
TCTTGTTGATCATCAACACG+AGG | + | chr8_2:39630380-39630399 | None:intergenic | 40.0% | |
ACACTGAATGGGAATCCAAT+GGG | + | chr8_2:39630419-39630438 | None:intergenic | 40.0% | |
! | TATTGAGAGGCACACTGAAT+GGG | + | chr8_2:39630430-39630449 | None:intergenic | 40.0% |
! | ATATTGAGAGGCACACTGAA+TGG | + | chr8_2:39630431-39630450 | None:intergenic | 40.0% |
TTCAGTGTGCCTCTCAATAT+TGG | - | chr8_2:39630431-39630450 | Msa1247140:CDS | 40.0% | |
CAAGCATCACCAATATTGAG+AGG | + | chr8_2:39630443-39630462 | None:intergenic | 40.0% | |
!! | CTCTCAATATTGGTGATGCT+TGG | - | chr8_2:39630441-39630460 | Msa1247140:CDS | 40.0% |
!! | GGAAGTCATCAAGTCTTGTT+TGG | - | chr8_2:39630462-39630481 | Msa1247140:CDS | 40.0% |
TGGTTGTGAGAAACTTGAAG+AGG | - | chr8_2:39628110-39628129 | Msa1247140:CDS | 40.0% | |
TTGAAGAGGTTATGCTTCCA+GGG | - | chr8_2:39628124-39628143 | Msa1247140:CDS | 40.0% | |
CCAACAAGTTCTTCATCAGT+TGG | + | chr8_2:39628162-39628181 | None:intergenic | 40.0% | |
CCAACTGATGAAGAACTTGT+TGG | - | chr8_2:39628159-39628178 | Msa1247140:CDS | 40.0% | |
TGATGAGCTCAATAGCAAGA+GGG | + | chr8_2:39628215-39628234 | None:intergenic | 40.0% | |
TTGATGAGCTCAATAGCAAG+AGG | + | chr8_2:39628216-39628235 | None:intergenic | 40.0% | |
TGTATAGAGTTGGCAAGTAC+AGG | - | chr8_2:39628912-39628931 | Msa1247140:intron | 40.0% | |
GTATAGAGTTGGCAAGTACA+GGG | - | chr8_2:39628913-39628932 | Msa1247140:intron | 40.0% | |
TATAGAGTTGGCAAGTACAG+GGG | - | chr8_2:39628914-39628933 | Msa1247140:intron | 40.0% | |
TTCCTGTACTTTCTGTCTCT+TGG | + | chr8_2:39628963-39628982 | None:intergenic | 40.0% | |
GAACAGTGCAAGACCTAATA+GGG | - | chr8_2:39628980-39628999 | Msa1247140:intron | 40.0% | |
CTAATAGGGTAACAAGAGCT+GGG | - | chr8_2:39628994-39629013 | Msa1247140:intron | 40.0% | |
CAGACCTATTTATTCCTCAG+AGG | - | chr8_2:39629040-39629059 | Msa1247140:intron | 40.0% | |
! | GAACCCTCTGAGGAATAAAT+AGG | + | chr8_2:39629047-39629066 | None:intergenic | 40.0% |
AATACACTTAGAACCCTCTG+AGG | + | chr8_2:39629057-39629076 | None:intergenic | 40.0% | |
!! | TCAGAGGGTTCTAAGTGTAT+TGG | - | chr8_2:39629056-39629075 | Msa1247140:intron | 40.0% |
!!! | CCAATCAGTTTTGACTCCTT+TGG | + | chr8_2:39629120-39629139 | None:intergenic | 40.0% |
CCAAAGGAGTCAAAACTGAT+TGG | - | chr8_2:39629117-39629136 | Msa1247140:intron | 40.0% | |
TTTACTTACATTGGCCGGAA+TGG | + | chr8_2:39629213-39629232 | None:intergenic | 40.0% | |
!!! | TTTTTTGTGTGCACCACATG+TGG | - | chr8_2:39629500-39629519 | Msa1247140:CDS | 40.0% |
! | TTTTTGTGTGCACCACATGT+GGG | - | chr8_2:39629501-39629520 | Msa1247140:CDS | 40.0% |
CAAGATCTTAACCTTAGCAC+TGG | - | chr8_2:39630182-39630201 | Msa1247140:intron | 40.0% | |
AGAATACTAAGCCAGTGCTA+AGG | + | chr8_2:39630196-39630215 | None:intergenic | 40.0% | |
TCTTGTTGATCATCAACACG+AGG | + | chr8_2:39630380-39630399 | None:intergenic | 40.0% | |
ACACTGAATGGGAATCCAAT+GGG | + | chr8_2:39630419-39630438 | None:intergenic | 40.0% | |
! | TATTGAGAGGCACACTGAAT+GGG | + | chr8_2:39630430-39630449 | None:intergenic | 40.0% |
! | ATATTGAGAGGCACACTGAA+TGG | + | chr8_2:39630431-39630450 | None:intergenic | 40.0% |
TTCAGTGTGCCTCTCAATAT+TGG | - | chr8_2:39630431-39630450 | Msa1247140:CDS | 40.0% | |
CAAGCATCACCAATATTGAG+AGG | + | chr8_2:39630443-39630462 | None:intergenic | 40.0% | |
!! | CTCTCAATATTGGTGATGCT+TGG | - | chr8_2:39630441-39630460 | Msa1247140:CDS | 40.0% |
!! | GGAAGTCATCAAGTCTTGTT+TGG | - | chr8_2:39630462-39630481 | Msa1247140:CDS | 40.0% |
CTTGAAGAGGTTATGCTTCC+AGG | - | chr8_2:39628123-39628142 | Msa1247140:CDS | 45.0% | |
AGGTTATGCTTCCAGGGTTT+AGG | - | chr8_2:39628130-39628149 | Msa1247140:CDS | 45.0% | |
GTTGGATGAAACCTAAACCC+TGG | + | chr8_2:39628144-39628163 | None:intergenic | 45.0% | |
GTCTTACTTGGTAGATCCCA+TGG | + | chr8_2:39628264-39628283 | None:intergenic | 45.0% | |
! | GTCCAAGAGACAGAAAGTAC+AGG | - | chr8_2:39628958-39628977 | Msa1247140:intron | 45.0% |
GGAACAGTGCAAGACCTAAT+AGG | - | chr8_2:39628979-39628998 | Msa1247140:intron | 45.0% | |
CCAGCTCTTGTTACCCTATT+AGG | + | chr8_2:39628996-39629015 | None:intergenic | 45.0% | |
CCTAATAGGGTAACAAGAGC+TGG | - | chr8_2:39628993-39629012 | Msa1247140:intron | 45.0% | |
TACAAAGGTAGAGCTGCCAA+AGG | - | chr8_2:39629101-39629120 | Msa1247140:intron | 45.0% | |
AGGAATCTTGGGCAATATGC+AGG | - | chr8_2:39629838-39629857 | Msa1247140:intron | 45.0% | |
AGCTCTTTGAGCTGTTGCAT+TGG | + | chr8_2:39629877-39629896 | None:intergenic | 45.0% | |
AAAGAGCTCTCTCTCACTCA+TGG | - | chr8_2:39629889-39629908 | Msa1247140:intron | 45.0% | |
AAGAGCTCTCTCTCACTCAT+GGG | - | chr8_2:39629890-39629909 | Msa1247140:intron | 45.0% | |
CACACTGAATGGGAATCCAA+TGG | + | chr8_2:39630420-39630439 | None:intergenic | 45.0% | |
! | GGGTTCATCAGAAGTACAAG+AGG | + | chr8_2:39630495-39630514 | None:intergenic | 45.0% |
CTTGAAGAGGTTATGCTTCC+AGG | - | chr8_2:39628123-39628142 | Msa1247140:CDS | 45.0% | |
AGGTTATGCTTCCAGGGTTT+AGG | - | chr8_2:39628130-39628149 | Msa1247140:CDS | 45.0% | |
GTTGGATGAAACCTAAACCC+TGG | + | chr8_2:39628144-39628163 | None:intergenic | 45.0% | |
GTCTTACTTGGTAGATCCCA+TGG | + | chr8_2:39628264-39628283 | None:intergenic | 45.0% | |
! | GTCCAAGAGACAGAAAGTAC+AGG | - | chr8_2:39628958-39628977 | Msa1247140:intron | 45.0% |
GGAACAGTGCAAGACCTAAT+AGG | - | chr8_2:39628979-39628998 | Msa1247140:intron | 45.0% | |
CCAGCTCTTGTTACCCTATT+AGG | + | chr8_2:39628996-39629015 | None:intergenic | 45.0% | |
CCTAATAGGGTAACAAGAGC+TGG | - | chr8_2:39628993-39629012 | Msa1247140:intron | 45.0% | |
TACAAAGGTAGAGCTGCCAA+AGG | - | chr8_2:39629101-39629120 | Msa1247140:intron | 45.0% | |
AGGAATCTTGGGCAATATGC+AGG | - | chr8_2:39629838-39629857 | Msa1247140:intron | 45.0% | |
AGCTCTTTGAGCTGTTGCAT+TGG | + | chr8_2:39629877-39629896 | None:intergenic | 45.0% | |
AAAGAGCTCTCTCTCACTCA+TGG | - | chr8_2:39629889-39629908 | Msa1247140:intron | 45.0% | |
AAGAGCTCTCTCTCACTCAT+GGG | - | chr8_2:39629890-39629909 | Msa1247140:intron | 45.0% | |
CACACTGAATGGGAATCCAA+TGG | + | chr8_2:39630420-39630439 | None:intergenic | 45.0% | |
! | GGGTTCATCAGAAGTACAAG+AGG | + | chr8_2:39630495-39630514 | None:intergenic | 45.0% |
CAAGTACAGGGGAGAAAGAG+TGG | - | chr8_2:39628925-39628944 | Msa1247140:intron | 50.0% | |
! | GGGTAACAAGAGCTGGGTTT+TGG | - | chr8_2:39629000-39629019 | Msa1247140:intron | 50.0% |
!!! | GCTGGGTTTTGGAAAGCAAC+AGG | - | chr8_2:39629011-39629030 | Msa1247140:intron | 50.0% |
TGCACTTAGTCGGATTGAGC+TGG | - | chr8_2:39629466-39629485 | Msa1247140:CDS | 50.0% | |
AGGATGTAGACACCCACATG+TGG | + | chr8_2:39629516-39629535 | None:intergenic | 50.0% | |
CTAGAGTGACTCGCAAAGCT+AGG | + | chr8_2:39630011-39630030 | None:intergenic | 50.0% | |
ACACGAGGCACGTTCACATT+AGG | + | chr8_2:39630365-39630384 | None:intergenic | 50.0% | |
! | TTGGATTCGGTTCGACCCAT+TGG | - | chr8_2:39630401-39630420 | Msa1247140:CDS | 50.0% |
CAAGTACAGGGGAGAAAGAG+TGG | - | chr8_2:39628925-39628944 | Msa1247140:intron | 50.0% | |
! | GGGTAACAAGAGCTGGGTTT+TGG | - | chr8_2:39629000-39629019 | Msa1247140:intron | 50.0% |
!!! | GCTGGGTTTTGGAAAGCAAC+AGG | - | chr8_2:39629011-39629030 | Msa1247140:intron | 50.0% |
TGCACTTAGTCGGATTGAGC+TGG | - | chr8_2:39629466-39629485 | Msa1247140:CDS | 50.0% | |
AGGATGTAGACACCCACATG+TGG | + | chr8_2:39629516-39629535 | None:intergenic | 50.0% | |
CTAGAGTGACTCGCAAAGCT+AGG | + | chr8_2:39630011-39630030 | None:intergenic | 50.0% | |
ACACGAGGCACGTTCACATT+AGG | + | chr8_2:39630365-39630384 | None:intergenic | 50.0% | |
! | TTGGATTCGGTTCGACCCAT+TGG | - | chr8_2:39630401-39630420 | Msa1247140:CDS | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 39628096 | 39630547 | 39628096 | ID=Msa1247140;Name=Msa1247140 |
chr8_2 | mRNA | 39628096 | 39630547 | 39628096 | ID=Msa1247140-mRNA-1;Parent=Msa1247140;Name=Msa1247140-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|397 |
chr8_2 | exon | 39630367 | 39630547 | 39630367 | ID=Msa1247140-mRNA-1:exon:12195;Parent=Msa1247140-mRNA-1 |
chr8_2 | exon | 39629420 | 39629724 | 39629420 | ID=Msa1247140-mRNA-1:exon:12194;Parent=Msa1247140-mRNA-1 |
chr8_2 | exon | 39628096 | 39628803 | 39628096 | ID=Msa1247140-mRNA-1:exon:12193;Parent=Msa1247140-mRNA-1 |
chr8_2 | CDS | 39630367 | 39630547 | 39630367 | ID=Msa1247140-mRNA-1:cds;Parent=Msa1247140-mRNA-1 |
chr8_2 | CDS | 39629420 | 39629724 | 39629420 | ID=Msa1247140-mRNA-1:cds;Parent=Msa1247140-mRNA-1 |
chr8_2 | CDS | 39628096 | 39628803 | 39628096 | ID=Msa1247140-mRNA-1:cds;Parent=Msa1247140-mRNA-1 |
Gene Sequence |
Protein sequence |