Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247290 | XP_003628373.1 | 97.678 | 732 | 16 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247290 | sp|Q9ZVH4|CUL3A_ARATH | 82.104 | 732 | 131 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247290 | G7LAY4 | 97.678 | 732 | 16 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1488 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1247290 | Msa1288450 | 0.819076 | 1.403835e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247290 | MtrunA17_Chr8g0361901 | 97.678 | 732 | 16 | 1 | 1 | 732 | 1 | 731 | 0.0 | 1488 |
| Msa1247290 | MtrunA17_Chr5g0416711 | 81.421 | 732 | 136 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1261 |
| Msa1247290 | MtrunA17_Chr6g0453061 | 77.915 | 729 | 160 | 1 | 5 | 732 | 2 | 730 | 0.0 | 1179 |
| Msa1247290 | MtrunA17_Chr1g0166181 | 76.828 | 725 | 162 | 3 | 11 | 732 | 18 | 739 | 0.0 | 1160 |
| Msa1247290 | MtrunA17_Chr1g0166131 | 75.862 | 725 | 169 | 3 | 11 | 732 | 19 | 740 | 0.0 | 1132 |
| Msa1247290 | MtrunA17_Chr6g0453081 | 74.074 | 729 | 188 | 1 | 5 | 732 | 2 | 730 | 0.0 | 1115 |
| Msa1247290 | MtrunA17_Chr7g0231701 | 77.941 | 680 | 139 | 2 | 53 | 732 | 40 | 708 | 0.0 | 1102 |
| Msa1247290 | MtrunA17_Chr1g0166141 | 78.428 | 598 | 127 | 1 | 137 | 732 | 77 | 674 | 0.0 | 973 |
| Msa1247290 | MtrunA17_Chr1g0166141 | 81.579 | 76 | 14 | 0 | 278 | 353 | 1 | 76 | 6.55e-32 | 132 |
| Msa1247290 | MtrunA17_Chr7g0231741 | 86.290 | 372 | 51 | 0 | 361 | 732 | 4 | 375 | 0.0 | 680 |
| Msa1247290 | MtrunA17_Chr5g0416731 | 70.048 | 414 | 79 | 2 | 53 | 421 | 25 | 438 | 0.0 | 582 |
| Msa1247290 | MtrunA17_Chr7g0231721 | 75.988 | 329 | 72 | 2 | 53 | 380 | 25 | 347 | 9.55e-179 | 514 |
| Msa1247290 | MtrunA17_Chr7g0231751 | 77.097 | 310 | 71 | 0 | 1 | 310 | 1 | 310 | 7.40e-178 | 510 |
| Msa1247290 | MtrunA17_Chr5g0416691 | 62.035 | 403 | 147 | 3 | 332 | 732 | 3 | 401 | 8.99e-178 | 513 |
| Msa1247290 | MtrunA17_Chr2g0285881 | 40.296 | 742 | 410 | 14 | 4 | 732 | 71 | 792 | 5.84e-177 | 526 |
| Msa1247290 | MtrunA17_Chr7g0231791 | 62.035 | 403 | 147 | 3 | 332 | 732 | 3 | 401 | 3.27e-176 | 509 |
| Msa1247290 | MtrunA17_Chr5g0416831 | 74.847 | 326 | 45 | 2 | 407 | 732 | 1 | 289 | 1.74e-169 | 488 |
| Msa1247290 | MtrunA17_Chr5g0416901 | 71.609 | 317 | 89 | 1 | 55 | 371 | 21 | 336 | 1.80e-163 | 475 |
| Msa1247290 | MtrunA17_Chr7g0231581 | 71.565 | 313 | 88 | 1 | 59 | 371 | 1 | 312 | 9.95e-163 | 472 |
| Msa1247290 | MtrunA17_Chr2g0296381 | 34.085 | 710 | 429 | 14 | 52 | 732 | 43 | 742 | 2.46e-130 | 404 |
| Msa1247290 | MtrunA17_Chr4g0067011 | 32.765 | 763 | 463 | 15 | 1 | 732 | 1 | 744 | 3.43e-127 | 395 |
| Msa1247290 | MtrunA17_Chr7g0231571 | 71.951 | 246 | 68 | 1 | 59 | 304 | 1 | 245 | 4.95e-124 | 370 |
| Msa1247290 | MtrunA17_Chr5g0416911 | 68.400 | 250 | 78 | 1 | 55 | 304 | 5 | 253 | 7.27e-119 | 357 |
| Msa1247290 | MtrunA17_Chr7g0268881 | 39.440 | 393 | 224 | 6 | 347 | 732 | 4 | 389 | 2.11e-83 | 270 |
| Msa1247290 | MtrunA17_Chr7g0231801 | 52.191 | 251 | 118 | 2 | 59 | 307 | 1 | 251 | 6.74e-82 | 261 |
| Msa1247290 | MtrunA17_Chr5g0416681 | 52.191 | 251 | 118 | 2 | 59 | 307 | 1 | 251 | 4.05e-81 | 259 |
| Msa1247290 | MtrunA17_Chr5g0416931 | 72.727 | 165 | 45 | 0 | 53 | 217 | 38 | 202 | 1.34e-80 | 255 |
| Msa1247290 | MtrunA17_Chr1g0166151 | 66.304 | 184 | 61 | 1 | 83 | 266 | 1 | 183 | 1.30e-79 | 252 |
| Msa1247290 | MtrunA17_Chr7g0231561 | 70.807 | 161 | 47 | 0 | 59 | 219 | 1 | 161 | 2.40e-77 | 245 |
| Msa1247290 | MtrunA17_Chr5g0416841 | 75.258 | 97 | 24 | 0 | 205 | 301 | 12 | 108 | 8.96e-47 | 161 |
| Msa1247290 | MtrunA17_Chr7g0268891 | 28.939 | 311 | 202 | 7 | 26 | 320 | 9 | 316 | 4.76e-38 | 145 |
| Msa1247290 | MtrunA17_Chr5g0416721 | 72.222 | 54 | 15 | 0 | 1 | 54 | 1 | 54 | 5.01e-21 | 87.4 |
| Msa1247290 | MtrunA17_Chr7g0231731 | 70.370 | 54 | 16 | 0 | 1 | 54 | 1 | 54 | 2.57e-20 | 85.1 |
| Msa1247290 | MtrunA17_Chr7g0231711 | 66.667 | 54 | 17 | 1 | 1 | 54 | 1 | 53 | 1.90e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1247290 | AT1G26830.1 | 82.104 | 732 | 131 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1288 |
| Msa1247290 | AT1G69670.1 | 81.557 | 732 | 135 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1278 |
| Msa1247290 | AT1G69670.2 | 81.557 | 732 | 135 | 0 | 1 | 732 | 1 | 732 | 0.0 | 1278 |
| Msa1247290 | AT5G46210.1 | 39.702 | 738 | 420 | 13 | 4 | 732 | 71 | 792 | 3.51e-168 | 503 |
| Msa1247290 | AT4G02570.4 | 33.946 | 707 | 431 | 13 | 52 | 732 | 42 | 738 | 1.09e-132 | 410 |
| Msa1247290 | AT4G02570.2 | 33.946 | 707 | 431 | 13 | 52 | 732 | 42 | 738 | 1.09e-132 | 410 |
| Msa1247290 | AT4G02570.1 | 33.946 | 707 | 431 | 13 | 52 | 732 | 42 | 738 | 1.09e-132 | 410 |
| Msa1247290 | AT4G02570.3 | 33.946 | 707 | 431 | 13 | 52 | 732 | 42 | 738 | 1.09e-132 | 410 |
| Msa1247290 | AT1G02980.1 | 32.349 | 711 | 442 | 14 | 51 | 732 | 42 | 742 | 1.31e-115 | 365 |
| Msa1247290 | AT1G02980.2 | 32.349 | 711 | 442 | 14 | 51 | 732 | 42 | 742 | 1.31e-115 | 365 |
| Msa1247290 | AT1G43140.1 | 32.240 | 701 | 425 | 17 | 52 | 732 | 51 | 721 | 4.97e-104 | 335 |
| Msa1247290 | AT1G59790.2 | 26.235 | 324 | 223 | 8 | 52 | 366 | 48 | 364 | 1.02e-29 | 122 |
| Msa1247290 | AT1G59790.1 | 26.619 | 278 | 192 | 7 | 52 | 320 | 48 | 322 | 2.94e-27 | 114 |
| Msa1247290 | AT1G59800.1 | 29.775 | 178 | 120 | 2 | 80 | 254 | 72 | 247 | 3.25e-22 | 97.1 |
| Msa1247290 | AT4G12100.1 | 23.003 | 313 | 206 | 10 | 24 | 317 | 76 | 372 | 2.38e-15 | 79.7 |
| Msa1247290 | AT3G46910.1 | 24.280 | 243 | 155 | 7 | 11 | 229 | 7 | 244 | 6.94e-12 | 66.6 |
Find 168 sgRNAs with CRISPR-Local
Find 499 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACCTCATCGATCGATTT+AGG | 0.105994 | 8_2:-39875087 | Msa1247290:five_prime_UTR |
| ACTGGATCTTTCAATCTTTC+AGG | 0.137063 | 8_2:+39869750 | None:intergenic |
| AATATGGTGCTTCACAAATT+TGG | 0.198790 | 8_2:-39870545 | Msa1247290:CDS |
| CACAACACTCAATGAATCTT+TGG | 0.228824 | 8_2:+39870081 | None:intergenic |
| AATCAATGGGTCTACTTAAA+AGG | 0.234531 | 8_2:+39868441 | None:intergenic |
| ACTTAGGATAAAATTATTAA+TGG | 0.235468 | 8_2:+39875202 | None:intergenic |
| TCTGAAAATTCTTCTTCTTC+TGG | 0.255367 | 8_2:+39875046 | None:intergenic |
| TACTCATCGGCTCCTTTCTA+AGG | 0.269735 | 8_2:+39868893 | None:intergenic |
| CAACCTCATCGATCGATTTA+GGG | 0.290617 | 8_2:-39875086 | Msa1247290:five_prime_UTR |
| TTAGCTTTGAAGAACTTTAC+AGG | 0.291791 | 8_2:-39874915 | Msa1247290:intron |
| TTAATCCATATGGAGAATTC+TGG | 0.298338 | 8_2:-39869918 | Msa1247290:CDS |
| AAACTATACAAGGTTAAAAT+AGG | 0.302125 | 8_2:-39868820 | Msa1247290:CDS |
| GACTGTGTTTGCTTCAGATT+TGG | 0.306722 | 8_2:+39875277 | None:intergenic |
| GCAATCATTGGCTTTAGTTA+AGG | 0.315661 | 8_2:-39868926 | Msa1247290:CDS |
| TGATGATAAATATGAAGATT+TGG | 0.316741 | 8_2:-39869877 | Msa1247290:CDS |
| ACGAGGAATTCAAAGCATTC+TGG | 0.343800 | 8_2:+39869646 | None:intergenic |
| AAAACATCGCAACAACAAAT+AGG | 0.345811 | 8_2:+39868396 | None:intergenic |
| GCAGACTTAAAAGCAACCTT+TGG | 0.354772 | 8_2:-39869087 | Msa1247290:CDS |
| CAATCATTGGCTTTAGTTAA+GGG | 0.355000 | 8_2:-39868925 | Msa1247290:CDS |
| CATGTCTTATCTGCATATTT+CGG | 0.358065 | 8_2:+39874991 | None:intergenic |
| TCGGCTACTGAACACACTTC+TGG | 0.360939 | 8_2:-39870258 | Msa1247290:CDS |
| CTGCACTTTGCGAGAAGTTT+CGG | 0.362050 | 8_2:-39869170 | Msa1247290:CDS |
| TCAGTTTACATCAAAATTAG+AGG | 0.377339 | 8_2:-39869352 | Msa1247290:CDS |
| GTTTAAGCATAGGGTTGTTA+TGG | 0.383121 | 8_2:-39875016 | Msa1247290:CDS |
| ATGCGTTTCTTGACCTCTGT+TGG | 0.385513 | 8_2:+39868613 | None:intergenic |
| AGTTTCCTGTTTCTCAGGTT+CGG | 0.385761 | 8_2:+39868774 | None:intergenic |
| TGCCGAGTTTCCTGTTTCTC+AGG | 0.386423 | 8_2:+39868769 | None:intergenic |
| TGGAAGAACTGAACAGGAAA+TGG | 0.387376 | 8_2:-39870430 | Msa1247290:CDS |
| ACTGTCCAGGTTCTTACAAC+AGG | 0.395150 | 8_2:-39869243 | Msa1247290:CDS |
| TCAATATACATTGAAATCAA+TGG | 0.397685 | 8_2:+39868427 | None:intergenic |
| TAAGAGATGTCTGCAATCAT+TGG | 0.401267 | 8_2:-39868938 | Msa1247290:CDS |
| TGAAATGAACTCTGGAGAAC+GGG | 0.408147 | 8_2:+39869599 | None:intergenic |
| GTAGGACCGTCGCCTAAGTC+AGG | 0.411159 | 8_2:+39869270 | None:intergenic |
| GGAATCCGAACCTGAGAAAC+AGG | 0.414007 | 8_2:-39868779 | Msa1247290:CDS |
| TCATTTATTCCAACCAGATC+AGG | 0.420558 | 8_2:-39870283 | Msa1247290:CDS |
| GATAAAATTATTAATGGTGG+TGG | 0.421341 | 8_2:+39875208 | None:intergenic |
| ACAACACTCAATGAATCTTT+GGG | 0.423919 | 8_2:+39870082 | None:intergenic |
| CAGCATTATTGAAAAGCATA+AGG | 0.426039 | 8_2:+39869016 | None:intergenic |
| GATGATAAATATGAAGATTT+GGG | 0.429458 | 8_2:-39869876 | Msa1247290:CDS |
| AGCCTCTGCACAAACTCAAC+TGG | 0.433380 | 8_2:+39869732 | None:intergenic |
| CATGCTCAGATTAATCCATA+TGG | 0.434059 | 8_2:-39869928 | Msa1247290:CDS |
| ACTTCACACATAAGGGAATC+TGG | 0.436605 | 8_2:-39869792 | Msa1247290:CDS |
| AGGAACTGTAGTTGCACAAA+AGG | 0.436933 | 8_2:-39868800 | Msa1247290:CDS |
| GTCGCCTAAGTCAGGGTGGC+TGG | 0.440169 | 8_2:+39869278 | None:intergenic |
| ACTTGTCATTGTTGAATGCC+AGG | 0.444070 | 8_2:+39869673 | None:intergenic |
| AACTCGGCAGCGAGTGGAGG+AGG | 0.446158 | 8_2:-39868755 | Msa1247290:CDS |
| TATTACCTTGGCACACATAC+TGG | 0.447625 | 8_2:-39869144 | Msa1247290:CDS |
| AAAGCATAAGGACACACATT+TGG | 0.448174 | 8_2:+39869028 | None:intergenic |
| GGCAGCGAGTGGAGGAGGAC+AGG | 0.448240 | 8_2:-39868750 | Msa1247290:CDS |
| GAAGTATTATAAACAGCATC+TGG | 0.448249 | 8_2:-39869457 | Msa1247290:CDS |
| ATTCAGAAATGCATACAATA+TGG | 0.452155 | 8_2:-39870561 | Msa1247290:intron |
| GATTGAAGCGTTTAAGCATA+GGG | 0.453200 | 8_2:-39875025 | Msa1247290:CDS |
| CTAAACCAGAATTCTCCATA+TGG | 0.453764 | 8_2:+39869913 | None:intergenic |
| CAATATACATTGAAATCAAT+GGG | 0.463169 | 8_2:+39868428 | None:intergenic |
| TAGTGAGGATCATGAAATCT+AGG | 0.463511 | 8_2:-39868705 | Msa1247290:CDS |
| TATGCCAGCCACCCTGACTT+AGG | 0.464316 | 8_2:-39869282 | Msa1247290:CDS |
| TGCTTCACAAATTTGGTGAT+AGG | 0.469912 | 8_2:-39870538 | Msa1247290:CDS |
| TGTAGATGATAAACTTCGTA+AGG | 0.470956 | 8_2:-39869571 | Msa1247290:CDS |
| AGGTGATGACTTCACACATA+AGG | 0.478646 | 8_2:-39869800 | Msa1247290:CDS |
| CAGTCTCGGGATCCATGTAA+TGG | 0.479832 | 8_2:+39869997 | None:intergenic |
| AGCGACTGAGATTCCTGCTC+CGG | 0.480910 | 8_2:-39868965 | Msa1247290:CDS |
| ACTGGTGAAGTTATTGATAG+AGG | 0.485538 | 8_2:-39870215 | Msa1247290:CDS |
| AACCTCTCAGGACACAATGC+AGG | 0.487006 | 8_2:-39869310 | Msa1247290:CDS |
| TGAAAAGAAGATTAATAAAG+TGG | 0.488330 | 8_2:-39869976 | Msa1247290:CDS |
| TCAGTAGCCGAGTCCTGATC+TGG | 0.488597 | 8_2:+39870270 | None:intergenic |
| TTCAGTAATCAAAGTGATGC+AGG | 0.488748 | 8_2:-39868496 | Msa1247290:three_prime_UTR |
| AGGTTCTTACAACAGGGTCT+TGG | 0.488962 | 8_2:-39869236 | Msa1247290:CDS |
| TTCATTGAGTGTTGTGATTG+TGG | 0.489826 | 8_2:-39870074 | Msa1247290:CDS |
| TTCAGCCCGAGTTCATGAAC+AGG | 0.490428 | 8_2:+39870323 | None:intergenic |
| GAGGCGTCTGAATGAGGAAA+TGG | 0.490900 | 8_2:-39870030 | Msa1247290:CDS |
| CGGTCCTACGCTTACTGTCC+AGG | 0.496060 | 8_2:-39869256 | Msa1247290:CDS |
| AACTTCGTAAGGGTCTGAAA+GGG | 0.499438 | 8_2:-39869560 | Msa1247290:CDS |
| GGTGATGACTTCACACATAA+GGG | 0.500163 | 8_2:-39869799 | Msa1247290:CDS |
| CAGACTTAAAAGCAACCTTT+GGG | 0.500900 | 8_2:-39869086 | Msa1247290:CDS |
| TTATTTGATTTAGAAAACTT+AGG | 0.501046 | 8_2:+39875186 | None:intergenic |
| TGATAGGTTGTACTCAGGAT+TGG | 0.503047 | 8_2:-39870522 | Msa1247290:CDS |
| TGCAGACATCTCTTAAGATC+CGG | 0.505265 | 8_2:+39868946 | None:intergenic |
| AAGACTCCTGTTCATGAACT+CGG | 0.516778 | 8_2:-39870329 | Msa1247290:CDS |
| AGATTGAAGCGTTTAAGCAT+AGG | 0.520162 | 8_2:-39875026 | Msa1247290:CDS |
| GTGCAGATATTTCCACTGGC+AGG | 0.524214 | 8_2:+39869187 | None:intergenic |
| AAACTTCGTAAGGGTCTGAA+AGG | 0.527114 | 8_2:-39869561 | Msa1247290:CDS |
| GGGAAGAAATGTCCTTAGAA+AGG | 0.527346 | 8_2:-39868905 | Msa1247290:CDS |
| ACAAATAGTGAAATGAACTC+TGG | 0.529442 | 8_2:+39869591 | None:intergenic |
| TAGGATAAAATTATTAATGG+TGG | 0.529503 | 8_2:+39875205 | None:intergenic |
| AGCTGAGAGGCGTCTGAATG+AGG | 0.532045 | 8_2:-39870036 | Msa1247290:CDS |
| ATAAAATTATTAATGGTGGT+GGG | 0.533754 | 8_2:+39875209 | None:intergenic |
| CTGGTGAAGTTATTGATAGA+GGG | 0.538344 | 8_2:-39870214 | Msa1247290:CDS |
| GGTGGATTGGAGTGTGTGTG+TGG | 0.539448 | 8_2:+39868325 | None:intergenic |
| CGAAATATGCAGATAAGACA+TGG | 0.541743 | 8_2:-39874990 | Msa1247290:CDS |
| TACAGACATGAAAACCTCTC+AGG | 0.548291 | 8_2:-39869322 | Msa1247290:CDS |
| GGACAGGAAGCCTCAGATTG+AGG | 0.548487 | 8_2:-39868734 | Msa1247290:CDS |
| ATGAACTCGGGCTGAATCTG+TGG | 0.550756 | 8_2:-39870316 | Msa1247290:CDS |
| GGATAGAGTTAGCCATTACA+TGG | 0.551642 | 8_2:-39870009 | Msa1247290:CDS |
| GAGGTTGTAGCAACAAGGAT+AGG | 0.552577 | 8_2:+39875102 | None:intergenic |
| AAGACCCTGTTGTAAGAACC+TGG | 0.553834 | 8_2:+39869238 | None:intergenic |
| CATTGAGTCTCTCATTGAGC+GGG | 0.558085 | 8_2:-39868593 | Msa1247290:CDS |
| TTTGGTGATAGGTTGTACTC+AGG | 0.562234 | 8_2:-39870527 | Msa1247290:CDS |
| CTTAAAAGCAACCTTTGGGA+AGG | 0.563218 | 8_2:-39869082 | Msa1247290:CDS |
| TGTAAACTGATAGCCACATT+CGG | 0.563890 | 8_2:+39869365 | None:intergenic |
| ATTGTCATGGCAAACTAACA+TGG | 0.566165 | 8_2:-39869115 | Msa1247290:CDS |
| TTGAGAAGATGATGATGAGG+AGG | 0.566492 | 8_2:+39875241 | None:intergenic |
| TGACCTCTGTTGGATTCGCA+AGG | 0.566744 | 8_2:+39868623 | None:intergenic |
| AAATCTATTGAAGCAGCTCA+AGG | 0.568181 | 8_2:-39870464 | Msa1247290:CDS |
| TGCTGATAAACTTAGCTACA+AGG | 0.569495 | 8_2:-39868998 | Msa1247290:CDS |
| AGACTCCTGTTCATGAACTC+GGG | 0.571232 | 8_2:-39870328 | Msa1247290:CDS |
| ACCTTGGCACACATACTGGC+AGG | 0.571727 | 8_2:-39869140 | Msa1247290:CDS |
| CAAAGTGCAGATATTTCCAC+TGG | 0.572612 | 8_2:+39869183 | None:intergenic |
| GTGAAATGAACTCTGGAGAA+CGG | 0.575403 | 8_2:+39869598 | None:intergenic |
| CATCTCTTAAGATCCGGAGC+AGG | 0.576512 | 8_2:+39868952 | None:intergenic |
| ACAGGAAACTCGGCAGCGAG+TGG | 0.580836 | 8_2:-39868761 | Msa1247290:CDS |
| AGCCACCCTGACTTAGGCGA+CGG | 0.585562 | 8_2:-39869276 | Msa1247290:CDS |
| TTAAAAGCAACCTTTGGGAA+GGG | 0.586426 | 8_2:-39869081 | Msa1247290:CDS |
| ACTATCGCCGCCTCAATCTG+AGG | 0.586727 | 8_2:+39868724 | None:intergenic |
| ATAAATATGAAGATTTGGGT+AGG | 0.586773 | 8_2:-39869872 | Msa1247290:CDS |
| TCCTGCCAGTATGTGTGCCA+AGG | 0.587792 | 8_2:+39869139 | None:intergenic |
| ATACGACAAGATTATAAACC+TGG | 0.588266 | 8_2:-39869691 | Msa1247290:CDS |
| GGATGATGTAGAGGTTACTC+TGG | 0.590036 | 8_2:-39869529 | Msa1247290:CDS |
| CATAAGGACACACATTTGGT+AGG | 0.591138 | 8_2:+39869032 | None:intergenic |
| CAGTTTACATCAAAATTAGA+GGG | 0.591739 | 8_2:-39869351 | Msa1247290:CDS |
| AAGTTTCGGTCATATTACCT+TGG | 0.594118 | 8_2:-39869156 | Msa1247290:CDS |
| AACCTGAGAAACAGGAAACT+CGG | 0.594659 | 8_2:-39868771 | Msa1247290:CDS |
| CATGTAATACTAGACTGAGT+TGG | 0.597381 | 8_2:+39869213 | None:intergenic |
| ATTCCAACCAGATCAGGACT+CGG | 0.601328 | 8_2:-39870277 | Msa1247290:CDS |
| ATGCTTCTGACCCTTCCCAA+AGG | 0.602178 | 8_2:+39869071 | None:intergenic |
| CTTAACAATGAGACTTCTCT+CGG | 0.603477 | 8_2:+39869395 | None:intergenic |
| TCACCAACATCTTTACTCAT+CGG | 0.604309 | 8_2:+39868880 | None:intergenic |
| TAGAGATATACTGATGTACA+TGG | 0.604770 | 8_2:-39870378 | Msa1247290:CDS |
| ATTTATAATCATAACGCTAG+TGG | 0.606333 | 8_2:-39874940 | Msa1247290:CDS |
| AATTCTTGAGCATAAACAGA+TGG | 0.606533 | 8_2:+39870152 | None:intergenic |
| GTAGATGATAAACTTCGTAA+GGG | 0.607058 | 8_2:-39869570 | Msa1247290:CDS |
| CTGTCCAGGTTCTTACAACA+GGG | 0.608852 | 8_2:-39869242 | Msa1247290:CDS |
| ACCTCTCAGGACACAATGCA+GGG | 0.612857 | 8_2:-39869309 | Msa1247290:CDS |
| TAGGACCGTCGCCTAAGTCA+GGG | 0.612941 | 8_2:+39869271 | None:intergenic |
| GGAAACTCGGCAGCGAGTGG+AGG | 0.615424 | 8_2:-39868758 | Msa1247290:CDS |
| GTTAAGCTCAAGACCGAATG+TGG | 0.616613 | 8_2:-39869378 | Msa1247290:CDS |
| AAAGAAGATTAATAAAGTGG+TGG | 0.620743 | 8_2:-39869973 | Msa1247290:CDS |
| TAGCCGAGTCCTGATCTGGT+TGG | 0.622232 | 8_2:+39870274 | None:intergenic |
| AGATTGAGGCGGCGATAGTG+AGG | 0.627417 | 8_2:-39868720 | Msa1247290:CDS |
| GAAATGAACTCTGGAGAACG+GGG | 0.628544 | 8_2:+39869600 | None:intergenic |
| ATAAACAGCATCTGGCAAAG+AGG | 0.630265 | 8_2:-39869449 | Msa1247290:CDS |
| GTGGATTGGAGTGTGTGTGT+GGG | 0.630388 | 8_2:+39868326 | None:intergenic |
| GTTCAGTAGTAAACTATACA+AGG | 0.638422 | 8_2:-39868830 | Msa1247290:CDS |
| TCGATGAGGTTGTAGCAACA+AGG | 0.639102 | 8_2:+39875097 | None:intergenic |
| CAGGAAGCCTCAGATTGAGG+CGG | 0.640359 | 8_2:-39868731 | Msa1247290:CDS |
| GGTCAACGAGGATGATGTAG+AGG | 0.645668 | 8_2:-39869538 | Msa1247290:CDS |
| GAGCCGATGAGTAAAGATGT+TGG | 0.646356 | 8_2:-39868883 | Msa1247290:CDS |
| ACTTCGTAAGGGTCTGAAAG+GGG | 0.649523 | 8_2:-39869559 | Msa1247290:CDS |
| TTGTCATGGCAAACTAACAT+GGG | 0.650035 | 8_2:-39869114 | Msa1247290:CDS |
| TATTACATGCAACCTGCCAG+TGG | 0.653340 | 8_2:-39869199 | Msa1247290:CDS |
| GCCCTGCATTGTGTCCTGAG+AGG | 0.655976 | 8_2:+39869308 | None:intergenic |
| GTGTTGTATCATAATGAACC+AGG | 0.658843 | 8_2:-39868474 | Msa1247290:three_prime_UTR |
| TTAGTACATAGTGAACGCAC+TGG | 0.661997 | 8_2:-39870233 | Msa1247290:CDS |
| TTGTTCCGTCGTGTAACCGA+CGG | 0.664584 | 8_2:-39869840 | Msa1247290:CDS |
| TGTAGAGGTTACTCTGGACA+AGG | 0.664682 | 8_2:-39869523 | Msa1247290:CDS |
| AAACCCTAAATCGATCGATG+AGG | 0.670174 | 8_2:+39875083 | None:intergenic |
| ATCCAGTTGAGTTTGTGCAG+AGG | 0.670411 | 8_2:-39869734 | Msa1247290:CDS |
| GCATTGAGTCTCTCATTGAG+CGG | 0.680938 | 8_2:-39868594 | Msa1247290:CDS |
| TTTCCTTGCGAATCCAACAG+AGG | 0.684226 | 8_2:-39868626 | Msa1247290:CDS |
| GACCGTCGCCTAAGTCAGGG+TGG | 0.696070 | 8_2:+39869274 | None:intergenic |
| ATACTGGCAGGAGATTGTCA+TGG | 0.705494 | 8_2:-39869128 | Msa1247290:CDS |
| AGAACCTGGACAGTAAGCGT+AGG | 0.706663 | 8_2:+39869252 | None:intergenic |
| TCTATTGAAGCAGCTCAAGG+AGG | 0.716304 | 8_2:-39870461 | Msa1247290:CDS |
| GGGTCTGAAAGGGGTCAACG+AGG | 0.729389 | 8_2:-39869550 | Msa1247290:CDS |
| GTTAATGAAATATTCAAACG+AGG | 0.733246 | 8_2:+39869629 | None:intergenic |
| GATGAGTAAAGATGTTGGTG+AGG | 0.734708 | 8_2:-39868878 | Msa1247290:CDS |
| AAATGAACTCTGGAGAACGG+GGG | 0.742959 | 8_2:+39869601 | None:intergenic |
| AAAGACCGTCGGTTACACGA+CGG | 0.749089 | 8_2:+39869835 | None:intergenic |
| ATTATCTTAAGAAAGCTGAG+AGG | 0.761790 | 8_2:-39870049 | Msa1247290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAATTAAAAAAA+AGG | + | chr8_2:39868782-39868801 | None:intergenic | 0.0% |
| !! | TACAATAAATCAAATAAAAA+TGG | + | chr8_2:39868845-39868864 | None:intergenic | 10.0% |
| !!! | TGTGTAATTTTAATTTTTTT+TGG | - | chr8_2:39868870-39868889 | Msa1247290:CDS | 10.0% |
| !!! | GTGTAATTTTAATTTTTTTT+GGG | - | chr8_2:39868871-39868890 | Msa1247290:CDS | 10.0% |
| !!! | ACAAATTTTAGTTAAAAATA+AGG | + | chr8_2:39872217-39872236 | None:intergenic | 10.0% |
| !! | TTCTAAATTGTATATAAATA+TGG | + | chr8_2:39872622-39872641 | None:intergenic | 10.0% |
| !! | ACTTAGGATAAAATTATTAA+TGG | + | chr8_2:39868462-39868481 | None:intergenic | 15.0% |
| !!! | TTATTTGATTTAGAAAACTT+AGG | + | chr8_2:39868478-39868497 | None:intergenic | 15.0% |
| !! | ATTTATTGAGTTTATTTATG+TGG | - | chr8_2:39869024-39869043 | Msa1247290:CDS | 15.0% |
| !!! | ATTTTCATTTTACAATTTTC+CGG | - | chr8_2:39869895-39869914 | Msa1247290:CDS | 15.0% |
| !!! | AATTTTTAGTATAAAAAGAG+TGG | - | chr8_2:39871661-39871680 | Msa1247290:intron | 15.0% |
| !!! | AATTTTAGTTAAAAATAAGG+CGG | + | chr8_2:39872214-39872233 | None:intergenic | 15.0% |
| !! | TTTAAATACAAAGAAGTTAA+TGG | + | chr8_2:39872452-39872471 | None:intergenic | 15.0% |
| !!! | ATTTATATACAATTTAGAAC+AGG | - | chr8_2:39872623-39872642 | Msa1247290:intron | 15.0% |
| !! | AAATATAACAAAAATGCTAA+TGG | - | chr8_2:39873478-39873497 | Msa1247290:intron | 15.0% |
| !! | ATAAAATTATTAATGGTGGT+GGG | + | chr8_2:39868455-39868474 | None:intergenic | 20.0% |
| !! | TAGGATAAAATTATTAATGG+TGG | + | chr8_2:39868459-39868478 | None:intergenic | 20.0% |
| !!! | CATGATTATGATTTATTTCT+TGG | - | chr8_2:39868812-39868831 | Msa1247290:CDS | 20.0% |
| !! | ATTTAGCATACATTAATAAG+AGG | + | chr8_2:39869156-39869175 | None:intergenic | 20.0% |
| !!! | AATATCTAGCTTTTAAGAAA+GGG | + | chr8_2:39870495-39870514 | None:intergenic | 20.0% |
| !!! | TAATATCTAGCTTTTAAGAA+AGG | + | chr8_2:39870496-39870515 | None:intergenic | 20.0% |
| !! | TTCTTAAAAGCTAGATATTA+AGG | - | chr8_2:39870496-39870515 | Msa1247290:CDS | 20.0% |
| !! | TCTTAAAAGCTAGATATTAA+GGG | - | chr8_2:39870497-39870516 | Msa1247290:CDS | 20.0% |
| !! | TTAATCTCTAATCTTCATAT+TGG | + | chr8_2:39870596-39870615 | None:intergenic | 20.0% |
| !! | AAGCAAATCAAATTAAAAAG+AGG | + | chr8_2:39870985-39871004 | None:intergenic | 20.0% |
| !! | GTCAAAATATACATCAATTT+AGG | - | chr8_2:39871686-39871705 | Msa1247290:intron | 20.0% |
| !! | GTAATTATAAAAAATGACAC+AGG | + | chr8_2:39872186-39872205 | None:intergenic | 20.0% |
| !! | ATTTATTATCTTCACTTTAG+CGG | - | chr8_2:39872365-39872384 | Msa1247290:intron | 20.0% |
| !!! | ACATGGTTTTATTGAATATT+AGG | - | chr8_2:39872749-39872768 | Msa1247290:intron | 20.0% |
| !! | ATAGATTTGTAAACTTTACT+TGG | - | chr8_2:39872857-39872876 | Msa1247290:intron | 20.0% |
| !! | TAGATTTGTAAACTTTACTT+GGG | - | chr8_2:39872858-39872877 | Msa1247290:intron | 20.0% |
| !!! | TTTATTATGAAGTTTCCTTT+TGG | - | chr8_2:39872983-39873002 | Msa1247290:intron | 20.0% |
| !! | TGAAAAGAAGATTAATAAAG+TGG | - | chr8_2:39873685-39873704 | Msa1247290:intron | 20.0% |
| !! | TGATGATAAATATGAAGATT+TGG | - | chr8_2:39873784-39873803 | Msa1247290:intron | 20.0% |
| !! | GATGATAAATATGAAGATTT+GGG | - | chr8_2:39873785-39873804 | Msa1247290:intron | 20.0% |
| !! | AAACTATACAAGGTTAAAAT+AGG | - | chr8_2:39874841-39874860 | Msa1247290:intron | 20.0% |
| !! | CAATATACATTGAAATCAAT+GGG | + | chr8_2:39875236-39875255 | None:intergenic | 20.0% |
| !! | TCAATATACATTGAAATCAA+TGG | + | chr8_2:39875237-39875256 | None:intergenic | 20.0% |
| ! | GATAAAATTATTAATGGTGG+TGG | + | chr8_2:39868456-39868475 | None:intergenic | 25.0% |
| ! | ATTTATAATCATAACGCTAG+TGG | - | chr8_2:39868721-39868740 | Msa1247290:CDS | 25.0% |
| !!! | TTTTTTTGGGTAAGATTTAG+AGG | - | chr8_2:39868884-39868903 | Msa1247290:CDS | 25.0% |
| !!! | GTTATAGGATTTTAGGTTTT+TGG | - | chr8_2:39868912-39868931 | Msa1247290:CDS | 25.0% |
| !! | AAGTAATTTGTAGCATTTCT+TGG | - | chr8_2:39868956-39868975 | Msa1247290:CDS | 25.0% |
| !! | AGTAATTTGTAGCATTTCTT+GGG | - | chr8_2:39868957-39868976 | Msa1247290:CDS | 25.0% |
| ! | AAATCATCTATAATTCGTTG+TGG | - | chr8_2:39869172-39869191 | Msa1247290:CDS | 25.0% |
| !!! | GTTGATTTGAAATGTTAAGA+AGG | - | chr8_2:39869408-39869427 | Msa1247290:CDS | 25.0% |
| ! | TCGAATCTTTAGATAATGAT+AGG | - | chr8_2:39869604-39869623 | Msa1247290:CDS | 25.0% |
| ! | ATAGGTTACTTGTGATTATA+AGG | - | chr8_2:39869622-39869641 | Msa1247290:CDS | 25.0% |
| ! | TAGGTTACTTGTGATTATAA+GGG | - | chr8_2:39869623-39869642 | Msa1247290:CDS | 25.0% |
| ! | TCTGTATTGAAAAGTAGTAA+AGG | + | chr8_2:39869873-39869892 | None:intergenic | 25.0% |
| !! | TGTTTTCGTAAAGTTTCAAA+GGG | - | chr8_2:39870437-39870456 | Msa1247290:CDS | 25.0% |
| ! | GTCATACATAACTTCAAAAA+GGG | + | chr8_2:39870953-39870972 | None:intergenic | 25.0% |
| ! | TGTCATACATAACTTCAAAA+AGG | + | chr8_2:39870954-39870973 | None:intergenic | 25.0% |
| !!! | AGAGTGTTTTTGTAATGTTA+AGG | - | chr8_2:39871077-39871096 | Msa1247290:intron | 25.0% |
| ! | GTTTATTGGAAATAGAACAT+AGG | + | chr8_2:39871268-39871287 | None:intergenic | 25.0% |
| ! | CTAATTTCAACTAAAACTCA+TGG | + | chr8_2:39871330-39871349 | None:intergenic | 25.0% |
| !!! | CTTTTTTATTACAGAAGGAT+CGG | + | chr8_2:39871629-39871648 | None:intergenic | 25.0% |
| !!! | TACTCCTTTTTTATTACAGA+AGG | + | chr8_2:39871634-39871653 | None:intergenic | 25.0% |
| ! | TTTCATGAAATATACTGGAT+TGG | + | chr8_2:39871715-39871734 | None:intergenic | 25.0% |
| ! | GTGAATTTCATGAAATATAC+TGG | + | chr8_2:39871720-39871739 | None:intergenic | 25.0% |
| ! | ACTATAGTAGTAGTCAATAT+TGG | - | chr8_2:39871738-39871757 | Msa1247290:intron | 25.0% |
| ! | CTTCATATGATTTCATTTAG+AGG | - | chr8_2:39872064-39872083 | Msa1247290:intron | 25.0% |
| !!! | AGTTTTATATACCTTCATTC+CGG | - | chr8_2:39872279-39872298 | Msa1247290:intron | 25.0% |
| !!! | GTTGCACTTTTTAATTTTAG+AGG | - | chr8_2:39872823-39872842 | Msa1247290:intron | 25.0% |
| ! | TTGAATTAACGAATTGTTTC+TGG | - | chr8_2:39872947-39872966 | Msa1247290:intron | 25.0% |
| ! | AATCCACATATAAACAGAAA+GGG | + | chr8_2:39873083-39873102 | None:intergenic | 25.0% |
| ! | ATTCAGAAATGCATACAATA+TGG | - | chr8_2:39873100-39873119 | Msa1247290:intron | 25.0% |
| !!! | ACAAAAATGCTAATGGATTT+AGG | - | chr8_2:39873485-39873504 | Msa1247290:intron | 25.0% |
| !! | ATTAATCTTCTTTTCAGTCT+CGG | + | chr8_2:39873681-39873700 | None:intergenic | 25.0% |
| ! | AAAGAAGATTAATAAAGTGG+TGG | - | chr8_2:39873688-39873707 | Msa1247290:intron | 25.0% |
| ! | ATAAATATGAAGATTTGGGT+AGG | - | chr8_2:39873789-39873808 | Msa1247290:intron | 25.0% |
| ! | GTTAATGAAATATTCAAACG+AGG | + | chr8_2:39874035-39874054 | None:intergenic | 25.0% |
| ! | TCAGTTTACATCAAAATTAG+AGG | - | chr8_2:39874309-39874328 | Msa1247290:intron | 25.0% |
| ! | CAGTTTACATCAAAATTAGA+GGG | - | chr8_2:39874310-39874329 | Msa1247290:intron | 25.0% |
| ! | ATAACGACAGAAAAATGTAT+CGG | - | chr8_2:39875109-39875128 | Msa1247290:five_prime_UTR | 25.0% |
| !! | TTTTTGAGAAGATGATGATG+AGG | + | chr8_2:39868426-39868445 | None:intergenic | 30.0% |
| TCTGAAAATTCTTCTTCTTC+TGG | + | chr8_2:39868618-39868637 | None:intergenic | 30.0% | |
| CATGTCTTATCTGCATATTT+CGG | + | chr8_2:39868673-39868692 | None:intergenic | 30.0% | |
| !! | TTAGCTTTGAAGAACTTTAC+AGG | - | chr8_2:39868746-39868765 | Msa1247290:CDS | 30.0% |
| TTTGAAGAACTTTACAGGTT+CGG | - | chr8_2:39868751-39868770 | Msa1247290:CDS | 30.0% | |
| !!! | AGGATTTTAGGTTTTTGGAT+TGG | - | chr8_2:39868917-39868936 | Msa1247290:CDS | 30.0% |
| !! | TGTTTAGTTTGTGATTGAAG+TGG | - | chr8_2:39868998-39869017 | Msa1247290:CDS | 30.0% |
| !! | AATTCGTCTTTTTCATCACA+CGG | + | chr8_2:39869063-39869082 | None:intergenic | 30.0% |
| ATGACAATATTAGAGAGTTG+AGG | - | chr8_2:39869240-39869259 | Msa1247290:CDS | 30.0% | |
| GACTTGTAGATTCTGTATTA+AGG | - | chr8_2:39869326-39869345 | Msa1247290:CDS | 30.0% | |
| ATTAAGGAAAGATCAGATGA+AGG | - | chr8_2:39869342-39869361 | Msa1247290:CDS | 30.0% | |
| AGTGAGGAAAGTTCATAATT+TGG | - | chr8_2:39869697-39869716 | Msa1247290:CDS | 30.0% | |
| AGGAAAGTTCATAATTTGGA+GGG | - | chr8_2:39869701-39869720 | Msa1247290:CDS | 30.0% | |
| AGCATGTAACCTACTTATTA+GGG | - | chr8_2:39869797-39869816 | Msa1247290:CDS | 30.0% | |
| GGCTTAGAAAAATACAATCA+TGG | + | chr8_2:39869844-39869863 | None:intergenic | 30.0% | |
| ! | GATTGTATTTTTCTAAGCCA+AGG | - | chr8_2:39869845-39869864 | Msa1247290:CDS | 30.0% |
| ! | GTGTTTTCGTAAAGTTTCAA+AGG | - | chr8_2:39870436-39870455 | Msa1247290:CDS | 30.0% |
| ! | GTTTTCGTAAAGTTTCAAAG+GGG | - | chr8_2:39870438-39870457 | Msa1247290:CDS | 30.0% |
| ! | TTTTCGTAAAGTTTCAAAGG+GGG | - | chr8_2:39870439-39870458 | Msa1247290:CDS | 30.0% |
| ATGATAAGTATCTAAGCACT+TGG | - | chr8_2:39870465-39870484 | Msa1247290:CDS | 30.0% | |
| TGATAAGTATCTAAGCACTT+GGG | - | chr8_2:39870466-39870485 | Msa1247290:CDS | 30.0% | |
| CTCTAATCTTCATATTGGTA+GGG | + | chr8_2:39870591-39870610 | None:intergenic | 30.0% | |
| TCTCTAATCTTCATATTGGT+AGG | + | chr8_2:39870592-39870611 | None:intergenic | 30.0% | |
| AGATTAGAGATTAAGAACAC+AGG | - | chr8_2:39870602-39870621 | Msa1247290:intron | 30.0% | |
| TAACATTGTTTGAACTCCTT+TGG | - | chr8_2:39870642-39870661 | Msa1247290:intron | 30.0% | |
| ACTTCTGTTTGTTTACGTAT+TGG | + | chr8_2:39870764-39870783 | None:intergenic | 30.0% | |
| AATACGTAAACAAACAGAAG+TGG | - | chr8_2:39870763-39870782 | Msa1247290:intron | 30.0% | |
| AACAAACAGAAGTGGTTAAT+AGG | - | chr8_2:39870771-39870790 | Msa1247290:intron | 30.0% | |
| TTAATGCTCAAGTACATATG+AGG | - | chr8_2:39871020-39871039 | Msa1247290:intron | 30.0% | |
| ! | ATTATTGATTGTTGCTTGTG+TGG | + | chr8_2:39871103-39871122 | None:intergenic | 30.0% |
| AGCAACAATCAATAATCCAA+AGG | - | chr8_2:39871107-39871126 | Msa1247290:intron | 30.0% | |
| !! | CCATCTTTTGATTAATCCTT+TGG | + | chr8_2:39871126-39871145 | None:intergenic | 30.0% |
| CCAAAGGATTAATCAAAAGA+TGG | - | chr8_2:39871123-39871142 | Msa1247290:intron | 30.0% | |
| TTGGAAATAGAACATAGGAA+AGG | + | chr8_2:39871263-39871282 | None:intergenic | 30.0% | |
| !! | TTGGATATCTTCTAGCTTAT+GGG | + | chr8_2:39871470-39871489 | None:intergenic | 30.0% |
| !! | TTTGGATATCTTCTAGCTTA+TGG | + | chr8_2:39871471-39871490 | None:intergenic | 30.0% |
| CGATCCTTCTGTAATAAAAA+AGG | - | chr8_2:39871627-39871646 | Msa1247290:intron | 30.0% | |
| ! | AAACAGTGAAAAGTGACTTT+TGG | + | chr8_2:39872097-39872116 | None:intergenic | 30.0% |
| ! | CACTGTTTCACTATTTTACT+TGG | - | chr8_2:39872109-39872128 | Msa1247290:intron | 30.0% |
| GTTCCTTTCTATATTATGCT+TGG | - | chr8_2:39872237-39872256 | Msa1247290:intron | 30.0% | |
| CTACCAAGCATAATATAGAA+AGG | + | chr8_2:39872243-39872262 | None:intergenic | 30.0% | |
| GAGAGATAATAAAGGAAACT+TGG | + | chr8_2:39872907-39872926 | None:intergenic | 30.0% | |
| CAATCAAGGAGAGATAATAA+AGG | + | chr8_2:39872915-39872934 | None:intergenic | 30.0% | |
| TCGTTAATTCAAGTAAAAGC+AGG | + | chr8_2:39872939-39872958 | None:intergenic | 30.0% | |
| ATCCACATATAAACAGAAAG+GGG | + | chr8_2:39873082-39873101 | None:intergenic | 30.0% | |
| GAATCCACATATAAACAGAA+AGG | + | chr8_2:39873084-39873103 | None:intergenic | 30.0% | |
| AATATGGTGCTTCACAAATT+TGG | - | chr8_2:39873116-39873135 | Msa1247290:intron | 30.0% | |
| TAGAGATATACTGATGTACA+TGG | - | chr8_2:39873283-39873302 | Msa1247290:intron | 30.0% | |
| AATTCTTGAGCATAAACAGA+TGG | + | chr8_2:39873512-39873531 | None:intergenic | 30.0% | |
| ACAACACTCAATGAATCTTT+GGG | + | chr8_2:39873582-39873601 | None:intergenic | 30.0% | |
| ATTATCTTAAGAAAGCTGAG+AGG | - | chr8_2:39873612-39873631 | Msa1247290:intron | 30.0% | |
| ! | TTAATCTTCTTTTCAGTCTC+GGG | + | chr8_2:39873680-39873699 | None:intergenic | 30.0% |
| TTAATCCATATGGAGAATTC+TGG | - | chr8_2:39873743-39873762 | Msa1247290:intron | 30.0% | |
| ATACGACAAGATTATAAACC+TGG | - | chr8_2:39873970-39873989 | Msa1247290:intron | 30.0% | |
| ACAAATAGTGAAATGAACTC+TGG | + | chr8_2:39874073-39874092 | None:intergenic | 30.0% | |
| TGTAGATGATAAACTTCGTA+AGG | - | chr8_2:39874090-39874109 | Msa1247290:intron | 30.0% | |
| GTAGATGATAAACTTCGTAA+GGG | - | chr8_2:39874091-39874110 | Msa1247290:intron | 30.0% | |
| ! | CATCTTTTTCTTGCAAGTAT+CGG | + | chr8_2:39874177-39874196 | None:intergenic | 30.0% |
| ! | GAAGTATTATAAACAGCATC+TGG | - | chr8_2:39874204-39874223 | Msa1247290:intron | 30.0% |
| ! | CAGCATTATTGAAAAGCATA+AGG | + | chr8_2:39874648-39874667 | None:intergenic | 30.0% |
| !! | CAATCATTGGCTTTAGTTAA+GGG | - | chr8_2:39874736-39874755 | Msa1247290:intron | 30.0% |
| GTTCAGTAGTAAACTATACA+AGG | - | chr8_2:39874831-39874850 | Msa1247290:intron | 30.0% | |
| ! | TTAAAAGGCAAATTTTCACC+TGG | + | chr8_2:39875208-39875227 | None:intergenic | 30.0% |
| AATCAATGGGTCTACTTAAA+AGG | + | chr8_2:39875223-39875242 | None:intergenic | 30.0% | |
| AAAACATCGCAACAACAAAT+AGG | + | chr8_2:39875268-39875287 | None:intergenic | 30.0% | |
| CAAAAAGACATCAGTATGTT+TGG | + | chr8_2:39875310-39875329 | None:intergenic | 30.0% | |
| ! | AGATTGAAGCGTTTAAGCAT+AGG | - | chr8_2:39868635-39868654 | Msa1247290:CDS | 35.0% |
| ! | GATTGAAGCGTTTAAGCATA+GGG | - | chr8_2:39868636-39868655 | Msa1247290:CDS | 35.0% |
| GTTTAAGCATAGGGTTGTTA+TGG | - | chr8_2:39868645-39868664 | Msa1247290:CDS | 35.0% | |
| CGAAATATGCAGATAAGACA+TGG | - | chr8_2:39868671-39868690 | Msa1247290:CDS | 35.0% | |
| ! | GATTTAGAGGTGATGGTTAT+AGG | - | chr8_2:39868897-39868916 | Msa1247290:CDS | 35.0% |
| !! | GGTGATGGTTATAGGATTTT+AGG | - | chr8_2:39868905-39868924 | Msa1247290:CDS | 35.0% |
| TACGAAACGAAATGCATTAG+TGG | + | chr8_2:39869127-39869146 | None:intergenic | 35.0% | |
| AAGGATAGTCAACTCATTAG+AGG | - | chr8_2:39869361-39869380 | Msa1247290:CDS | 35.0% | |
| ! | TAACGAGTTGGATCGAAATA+TGG | - | chr8_2:39869441-39869460 | Msa1247290:CDS | 35.0% |
| GCTTAGCTTAAATTCTTTGC+AGG | - | chr8_2:39869557-39869576 | Msa1247290:CDS | 35.0% | |
| !!! | TTTTTTGACGAGCAACATCA+GGG | + | chr8_2:39869649-39869668 | None:intergenic | 35.0% |
| !!! | TTTTTTTGACGAGCAACATC+AGG | + | chr8_2:39869650-39869669 | None:intergenic | 35.0% |
| GATGTTGCTCGTCAAAAAAA+CGG | - | chr8_2:39869650-39869669 | Msa1247290:CDS | 35.0% | |
| ATGTTGCTCGTCAAAAAAAC+GGG | - | chr8_2:39869651-39869670 | Msa1247290:CDS | 35.0% | |
| GAGGAAAGTTCATAATTTGG+AGG | - | chr8_2:39869700-39869719 | Msa1247290:CDS | 35.0% | |
| ! | ACTCTTTTTCTCACGGTTAA+TGG | + | chr8_2:39869734-39869753 | None:intergenic | 35.0% |
| ATTAACCGTGAGAAAAAGAG+TGG | - | chr8_2:39869733-39869752 | Msa1247290:CDS | 35.0% | |
| TTAACCGTGAGAAAAAGAGT+GGG | - | chr8_2:39869734-39869753 | Msa1247290:CDS | 35.0% | |
| !! | GAGAAAATTAGGAAGTGCTA+AGG | - | chr8_2:39869759-39869778 | Msa1247290:CDS | 35.0% |
| CAGCATGTAACCTACTTATT+AGG | - | chr8_2:39869796-39869815 | Msa1247290:CDS | 35.0% | |
| GCATGTAACCTACTTATTAG+GGG | - | chr8_2:39869798-39869817 | Msa1247290:CDS | 35.0% | |
| TCATTCTTCCCCTAATAAGT+AGG | + | chr8_2:39869809-39869828 | None:intergenic | 35.0% | |
| ! | TTTTCCGGAGTTCTATCAAT+TGG | - | chr8_2:39869910-39869929 | Msa1247290:CDS | 35.0% |
| TGAACCAATTGATAGAACTC+CGG | + | chr8_2:39869917-39869936 | None:intergenic | 35.0% | |
| TCAAACCTTCCAAATACTGT+TGG | - | chr8_2:39869934-39869953 | Msa1247290:CDS | 35.0% | |
| CAAACCTTCCAAATACTGTT+GGG | - | chr8_2:39869935-39869954 | Msa1247290:CDS | 35.0% | |
| TTTGAACACCCAACAGTATT+TGG | + | chr8_2:39869946-39869965 | None:intergenic | 35.0% | |
| TCAACTCTGTTTGTCATCTT+TGG | + | chr8_2:39869975-39869994 | None:intergenic | 35.0% | |
| ! | GACAAACAGAGTTGATTCAT+TGG | - | chr8_2:39869980-39869999 | Msa1247290:CDS | 35.0% |
| TGACAAAATCCTCCAAGAAA+GGG | + | chr8_2:39870016-39870035 | None:intergenic | 35.0% | |
| TTGACAAAATCCTCCAAGAA+AGG | + | chr8_2:39870017-39870036 | None:intergenic | 35.0% | |
| ! | CTTTTCGGAATTTCACCAAT+GGG | + | chr8_2:39870043-39870062 | None:intergenic | 35.0% |
| AACACAATTCATCTGATGAG+AGG | - | chr8_2:39870093-39870112 | Msa1247290:CDS | 35.0% | |
| ACACAATTCATCTGATGAGA+GGG | - | chr8_2:39870094-39870113 | Msa1247290:CDS | 35.0% | |
| AATACTACCTCCATTCTCAT+GGG | + | chr8_2:39870151-39870170 | None:intergenic | 35.0% | |
| AAATACTACCTCCATTCTCA+TGG | + | chr8_2:39870152-39870171 | None:intergenic | 35.0% | |
| GGTAGTATTTCAGGAATAAG+AGG | - | chr8_2:39870162-39870181 | Msa1247290:CDS | 35.0% | |
| TTGGTCAGTTCCATCAAATA+AGG | + | chr8_2:39870253-39870272 | None:intergenic | 35.0% | |
| TTATTTGATGGAACTGACCA+AGG | - | chr8_2:39870252-39870271 | Msa1247290:CDS | 35.0% | |
| ACACCGTAAGAGATTATCTT+AGG | - | chr8_2:39870318-39870337 | Msa1247290:CDS | 35.0% | |
| TCGCCTAAGATAATCTCTTA+CGG | + | chr8_2:39870324-39870343 | None:intergenic | 35.0% | |
| AGAGATTATCTTAGGCGATA+AGG | - | chr8_2:39870326-39870345 | Msa1247290:CDS | 35.0% | |
| !! | TAAGAAGCTTGCTATACTAC+AGG | - | chr8_2:39870384-39870403 | Msa1247290:CDS | 35.0% |
| TGGAACATTTAAGTGTGACT+TGG | + | chr8_2:39870530-39870549 | None:intergenic | 35.0% | |
| TTAAATGTTCCATCTCGATG+TGG | - | chr8_2:39870538-39870557 | Msa1247290:CDS | 35.0% | |
| CTTCATATTGGTAGGGATTT+GGG | + | chr8_2:39870584-39870603 | None:intergenic | 35.0% | |
| TCTTCATATTGGTAGGGATT+TGG | + | chr8_2:39870585-39870604 | None:intergenic | 35.0% | |
| TTAAGAACACAGGTTCCATA+TGG | - | chr8_2:39870612-39870631 | Msa1247290:intron | 35.0% | |
| GGAGTTCAAACAATGTTAGA+AGG | + | chr8_2:39870640-39870659 | None:intergenic | 35.0% | |
| ! | TTTGAACTCCTTTGGAAGAA+AGG | - | chr8_2:39870650-39870669 | Msa1247290:intron | 35.0% |
| AAACATGGGACTCATACAAT+TGG | - | chr8_2:39870678-39870697 | Msa1247290:intron | 35.0% | |
| ! | GCAGGAACTATTCAGATTTT+GGG | - | chr8_2:39870700-39870719 | Msa1247290:intron | 35.0% |
| ! | CAGGAACTATTCAGATTTTG+GGG | - | chr8_2:39870701-39870720 | Msa1247290:intron | 35.0% |
| AGAAGTGGTTAATAGGTGTT+TGG | - | chr8_2:39870778-39870797 | Msa1247290:intron | 35.0% | |
| ! | TCATCCACATCATTCTAGAA+GGG | + | chr8_2:39870822-39870841 | None:intergenic | 35.0% |
| CTTATGTTGTTCTGTGATGA+AGG | + | chr8_2:39870848-39870867 | None:intergenic | 35.0% | |
| AACATAAGAGTTGACATGAG+TGG | - | chr8_2:39870860-39870879 | Msa1247290:intron | 35.0% | |
| !! | TTGACATGAGTGGTTGTTTT+GGG | - | chr8_2:39870870-39870889 | Msa1247290:intron | 35.0% |
| !! | TTCAAAAAGGGTGTTTCTCA+TGG | + | chr8_2:39870941-39870960 | None:intergenic | 35.0% |
| ATGTACTTGAGCATTAACGT+TGG | + | chr8_2:39871017-39871036 | None:intergenic | 35.0% | |
| !!! | GGTCCATTTTGATTTTTGAG+TGG | - | chr8_2:39871160-39871179 | Msa1247290:intron | 35.0% |
| CCACCACTCAAAAATCAAAA+TGG | + | chr8_2:39871166-39871185 | None:intergenic | 35.0% | |
| !!! | CCATTTTGATTTTTGAGTGG+TGG | - | chr8_2:39871163-39871182 | Msa1247290:intron | 35.0% |
| !! | TTTTGAGTGGTGGAGAAATA+TGG | - | chr8_2:39871173-39871192 | Msa1247290:intron | 35.0% |
| GTGCTTCTTGAGAAGTTTAT+TGG | + | chr8_2:39871282-39871301 | None:intergenic | 35.0% | |
| !! | AACTTCTCAAGAAGCACTTA+TGG | - | chr8_2:39871285-39871304 | Msa1247290:intron | 35.0% |
| AAGCTAGAAGATATCCAAAC+TGG | - | chr8_2:39871472-39871491 | Msa1247290:intron | 35.0% | |
| TCAGCATTTGACAATGTTCA+TGG | - | chr8_2:39871577-39871596 | Msa1247290:intron | 35.0% | |
| CAGCATTTGACAATGTTCAT+GGG | - | chr8_2:39871578-39871597 | Msa1247290:intron | 35.0% | |
| AGCATTTGACAATGTTCATG+GGG | - | chr8_2:39871579-39871598 | Msa1247290:intron | 35.0% | |
| GAGATAACAAGAATGGTGAT+GGG | + | chr8_2:39872039-39872058 | None:intergenic | 35.0% | |
| AGAGATAACAAGAATGGTGA+TGG | + | chr8_2:39872040-39872059 | None:intergenic | 35.0% | |
| AGACAGAGAGATAACAAGAA+TGG | + | chr8_2:39872046-39872065 | None:intergenic | 35.0% | |
| ACAGGTGATCAGGAAAATAA+AGG | + | chr8_2:39872168-39872187 | None:intergenic | 35.0% | |
| AAAAAATGACACAGGTGATC+AGG | + | chr8_2:39872178-39872197 | None:intergenic | 35.0% | |
| AGTTAAAAATAAGGCGGTGA+TGG | + | chr8_2:39872208-39872227 | None:intergenic | 35.0% | |
| GTAATAGAACAACTGCTTAC+CGG | + | chr8_2:39872301-39872320 | None:intergenic | 35.0% | |
| ATGGTGAATACAGAACAAAC+TGG | + | chr8_2:39872433-39872452 | None:intergenic | 35.0% | |
| CTTTGCTCAAACATCTTAAG+TGG | + | chr8_2:39872544-39872563 | None:intergenic | 35.0% | |
| AAATATGGCATTCTACTGAG+TGG | + | chr8_2:39872607-39872626 | None:intergenic | 35.0% | |
| ! | AGAGCTGATTCTATTTCCTT+TGG | - | chr8_2:39872653-39872672 | Msa1247290:intron | 35.0% |
| ACGTTGTTTAATGTTCCACT+TGG | + | chr8_2:39872685-39872704 | None:intergenic | 35.0% | |
| TCAGTATGTGTGACAAAACT+TGG | - | chr8_2:39872792-39872811 | Msa1247290:intron | 35.0% | |
| AAGTAAAAGCAGGTCAATCA+AGG | + | chr8_2:39872929-39872948 | None:intergenic | 35.0% | |
| !! | ACGAATTGTTTCTGGCATAT+TGG | - | chr8_2:39872955-39872974 | Msa1247290:intron | 35.0% |
| ! | TCCTTTTGGACATTTACACA+CGG | - | chr8_2:39872997-39873016 | Msa1247290:intron | 35.0% |
| TCCACATATAAACAGAAAGG+GGG | + | chr8_2:39873081-39873100 | None:intergenic | 35.0% | |
| ! | TGCTTCACAAATTTGGTGAT+AGG | - | chr8_2:39873123-39873142 | Msa1247290:intron | 35.0% |
| AAATCTATTGAAGCAGCTCA+AGG | - | chr8_2:39873197-39873216 | Msa1247290:intron | 35.0% | |
| ! | TTCATGAACAGGAGTCTTTT+TGG | + | chr8_2:39873330-39873349 | None:intergenic | 35.0% |
| TCATTTATTCCAACCAGATC+AGG | - | chr8_2:39873378-39873397 | Msa1247290:intron | 35.0% | |
| ACTGGTGAAGTTATTGATAG+AGG | - | chr8_2:39873446-39873465 | Msa1247290:intron | 35.0% | |
| CTGGTGAAGTTATTGATAGA+GGG | - | chr8_2:39873447-39873466 | Msa1247290:intron | 35.0% | |
| !! | AGTTTCAGCTGAGTTTTATC+AGG | - | chr8_2:39873550-39873569 | Msa1247290:intron | 35.0% |
| CACAACACTCAATGAATCTT+TGG | + | chr8_2:39873583-39873602 | None:intergenic | 35.0% | |
| ! | TTCATTGAGTGTTGTGATTG+TGG | - | chr8_2:39873587-39873606 | Msa1247290:intron | 35.0% |
| CATGCTCAGATTAATCCATA+TGG | - | chr8_2:39873733-39873752 | Msa1247290:intron | 35.0% | |
| CTAAACCAGAATTCTCCATA+TGG | + | chr8_2:39873751-39873770 | None:intergenic | 35.0% | |
| ! | TCGTATTTTCAAAAGACCGT+CGG | + | chr8_2:39873840-39873859 | None:intergenic | 35.0% |
| ACTGGATCTTTCAATCTTTC+AGG | + | chr8_2:39873914-39873933 | None:intergenic | 35.0% | |
| CTTAACAATGAGACTTCTCT+CGG | + | chr8_2:39874269-39874288 | None:intergenic | 35.0% | |
| TGTAAACTGATAGCCACATT+CGG | + | chr8_2:39874299-39874318 | None:intergenic | 35.0% | |
| CATGTAATACTAGACTGAGT+TGG | + | chr8_2:39874451-39874470 | None:intergenic | 35.0% | |
| AAGTTTCGGTCATATTACCT+TGG | - | chr8_2:39874505-39874524 | Msa1247290:intron | 35.0% | |
| ATTGTCATGGCAAACTAACA+TGG | - | chr8_2:39874546-39874565 | Msa1247290:intron | 35.0% | |
| TTGTCATGGCAAACTAACAT+GGG | - | chr8_2:39874547-39874566 | Msa1247290:intron | 35.0% | |
| CAGACTTAAAAGCAACCTTT+GGG | - | chr8_2:39874575-39874594 | Msa1247290:intron | 35.0% | |
| ! | TTAAAAGCAACCTTTGGGAA+GGG | - | chr8_2:39874580-39874599 | Msa1247290:intron | 35.0% |
| AAAGCATAAGGACACACATT+TGG | + | chr8_2:39874636-39874655 | None:intergenic | 35.0% | |
| TGCTGATAAACTTAGCTACA+AGG | - | chr8_2:39874663-39874682 | Msa1247290:intron | 35.0% | |
| TAAGAGATGTCTGCAATCAT+TGG | - | chr8_2:39874723-39874742 | Msa1247290:intron | 35.0% | |
| !! | GCAATCATTGGCTTTAGTTA+AGG | - | chr8_2:39874735-39874754 | Msa1247290:intron | 35.0% |
| TCACCAACATCTTTACTCAT+CGG | + | chr8_2:39874784-39874803 | None:intergenic | 35.0% | |
| TAGTGAGGATCATGAAATCT+AGG | - | chr8_2:39874956-39874975 | Msa1247290:CDS | 35.0% | |
| TTCAGTAATCAAAGTGATGC+AGG | - | chr8_2:39875165-39875184 | Msa1247290:five_prime_UTR | 35.0% | |
| GTGTTGTATCATAATGAACC+AGG | - | chr8_2:39875187-39875206 | Msa1247290:five_prime_UTR | 35.0% | |
| GACTGTGTTTGCTTCAGATT+TGG | + | chr8_2:39868387-39868406 | None:intergenic | 40.0% | |
| ! | TTGAGAAGATGATGATGAGG+AGG | + | chr8_2:39868423-39868442 | None:intergenic | 40.0% |
| ! | ACAACCTCATCGATCGATTT+AGG | - | chr8_2:39868574-39868593 | Msa1247290:CDS | 40.0% |
| ! | CAACCTCATCGATCGATTTA+GGG | - | chr8_2:39868575-39868594 | Msa1247290:CDS | 40.0% |
| AAACCCTAAATCGATCGATG+AGG | + | chr8_2:39868581-39868600 | None:intergenic | 40.0% | |
| TGGGTAAGATTTAGAGGTGA+TGG | - | chr8_2:39868890-39868909 | Msa1247290:CDS | 40.0% | |
| ATTCGTTGTGGATGTTGTGT+TGG | - | chr8_2:39869184-39869203 | Msa1247290:CDS | 40.0% | |
| ACCTATAGTAGAAACTGTCG+TGG | - | chr8_2:39869267-39869286 | Msa1247290:CDS | 40.0% | |
| TCCACGACAGTTTCTACTAT+AGG | + | chr8_2:39869271-39869290 | None:intergenic | 40.0% | |
| TAGAAACTGTCGTGGACAAT+AGG | - | chr8_2:39869275-39869294 | Msa1247290:CDS | 40.0% | |
| AAACCTTATCCCACTAAGTG+TGG | + | chr8_2:39869506-39869525 | None:intergenic | 40.0% | |
| ACACTTAGTGGGATAAGGTT+TGG | - | chr8_2:39869505-39869524 | Msa1247290:CDS | 40.0% | |
| TGTTGCTCGTCAAAAAAACG+GGG | - | chr8_2:39869652-39869671 | Msa1247290:CDS | 40.0% | |
| ACTCTCTCAGATTCAACATC+AGG | + | chr8_2:39869680-39869699 | None:intergenic | 40.0% | |
| ATGTTGAATCTGAGAGAGTG+AGG | - | chr8_2:39869681-39869700 | Msa1247290:CDS | 40.0% | |
| TAACCGTGAGAAAAAGAGTG+GGG | - | chr8_2:39869735-39869754 | Msa1247290:CDS | 40.0% | |
| AAGAGTGGGGAGAGAAAATT+AGG | - | chr8_2:39869748-39869767 | Msa1247290:CDS | 40.0% | |
| GAAAAGTAGTAAAGGAGCCT+TGG | + | chr8_2:39869865-39869884 | None:intergenic | 40.0% | |
| AACACCCAACAGTATTTGGA+AGG | + | chr8_2:39869942-39869961 | None:intergenic | 40.0% | |
| ! | GGATTTTGTCAAACTCCCAT+TGG | - | chr8_2:39870025-39870044 | Msa1247290:CDS | 40.0% |
| ! | GCTTTTCGGAATTTCACCAA+TGG | + | chr8_2:39870044-39870063 | None:intergenic | 40.0% |
| ATTCCGAAAAGCTGTTCTGT+TGG | - | chr8_2:39870052-39870071 | Msa1247290:CDS | 40.0% | |
| ! | GTTCCAACAGAACAGCTTTT+CGG | + | chr8_2:39870058-39870077 | None:intergenic | 40.0% |
| GAGAATGGAGGTAGTATTTC+AGG | - | chr8_2:39870153-39870172 | Msa1247290:CDS | 40.0% | |
| TGATGTAGAGACAGAGATGT+TGG | - | chr8_2:39870356-39870375 | Msa1247290:CDS | 40.0% | |
| GATGTAGAGACAGAGATGTT+GGG | - | chr8_2:39870357-39870376 | Msa1247290:CDS | 40.0% | |
| ATGTAGAGACAGAGATGTTG+GGG | - | chr8_2:39870358-39870377 | Msa1247290:CDS | 40.0% | |
| TACTACAGGTTCATGTTCTC+AGG | - | chr8_2:39870398-39870417 | Msa1247290:CDS | 40.0% | |
| ACTACAGGTTCATGTTCTCA+GGG | - | chr8_2:39870399-39870418 | Msa1247290:CDS | 40.0% | |
| GTAGGGATTTGGGTATTATG+GGG | + | chr8_2:39870574-39870593 | None:intergenic | 40.0% | |
| GGTAGGGATTTGGGTATTAT+GGG | + | chr8_2:39870575-39870594 | None:intergenic | 40.0% | |
| TGGTAGGGATTTGGGTATTA+TGG | + | chr8_2:39870576-39870595 | None:intergenic | 40.0% | |
| CAATGTTAGAAGGAGCCATA+TGG | + | chr8_2:39870630-39870649 | None:intergenic | 40.0% | |
| ! | AACTCCTTTGGAAGAAAGGA+GGG | - | chr8_2:39870654-39870673 | Msa1247290:intron | 40.0% |
| ! | GGCAGGAACTATTCAGATTT+TGG | - | chr8_2:39870699-39870718 | Msa1247290:intron | 40.0% |
| AGTGGTTAATAGGTGTTTGG+AGG | - | chr8_2:39870781-39870800 | Msa1247290:intron | 40.0% | |
| !! | TTTCCCCTTCTAGAATGATG+TGG | - | chr8_2:39870815-39870834 | Msa1247290:intron | 40.0% |
| ! | CATCCACATCATTCTAGAAG+GGG | + | chr8_2:39870821-39870840 | None:intergenic | 40.0% |
| CTCATCCACATCATTCTAGA+AGG | + | chr8_2:39870823-39870842 | None:intergenic | 40.0% | |
| ! | GTTGACATGAGTGGTTGTTT+TGG | - | chr8_2:39870869-39870888 | Msa1247290:intron | 40.0% |
| ATGCTCAAGTACATATGAGG+AGG | - | chr8_2:39871023-39871042 | Msa1247290:intron | 40.0% | |
| CAGATAAATGCTGGAGTTTG+AGG | - | chr8_2:39871050-39871069 | Msa1247290:intron | 40.0% | |
| AAGATGGCTGAGAGTTACTA+TGG | - | chr8_2:39871139-39871158 | Msa1247290:intron | 40.0% | |
| CGTTATATCAAGGTCCAGTT+TGG | + | chr8_2:39871489-39871508 | None:intergenic | 40.0% | |
| AACTGGACCTTGATATAACG+AGG | - | chr8_2:39871489-39871508 | Msa1247290:intron | 40.0% | |
| CTGTTTGCCTCGTTATATCA+AGG | + | chr8_2:39871499-39871518 | None:intergenic | 40.0% | |
| AGTAGTAGTCAATATTGGCC+AGG | - | chr8_2:39871743-39871762 | Msa1247290:intron | 40.0% | |
| GTCCTTACGTCCATGAATAA+TGG | - | chr8_2:39871851-39871870 | Msa1247290:intron | 40.0% | |
| AGCCATTATTCATGGACGTA+AGG | + | chr8_2:39871856-39871875 | None:intergenic | 40.0% | |
| GCTGCTATAGCCATTATTCA+TGG | + | chr8_2:39871864-39871883 | None:intergenic | 40.0% | |
| GATCCTGAGCAAACTTATTC+TGG | - | chr8_2:39871885-39871904 | Msa1247290:intron | 40.0% | |
| TGCTGTAAATATCAACAGCG+AGG | + | chr8_2:39871945-39871964 | None:intergenic | 40.0% | |
| CAAGAAGATTGAAGGACGAA+AGG | + | chr8_2:39872014-39872033 | None:intergenic | 40.0% | |
| ! | GAGGGGTTATAGATCGTTTT+GGG | + | chr8_2:39872402-39872421 | None:intergenic | 40.0% |
| ! | AGAGGGGTTATAGATCGTTT+TGG | + | chr8_2:39872403-39872422 | None:intergenic | 40.0% |
| AAACGATCTATAACCCCTCT+AGG | - | chr8_2:39872403-39872422 | Msa1247290:intron | 40.0% | |
| AACAAACTGGTCAACCTAGA+GGG | + | chr8_2:39872420-39872439 | None:intergenic | 40.0% | |
| ! | TTCCTTTGGTTTAAGCCAAG+TGG | - | chr8_2:39872667-39872686 | Msa1247290:intron | 40.0% |
| TTCCACTTGGCTTAAACCAA+AGG | + | chr8_2:39872672-39872691 | None:intergenic | 40.0% | |
| TGTTTGAGCAGCATTGTAAC+TGG | + | chr8_2:39872732-39872751 | None:intergenic | 40.0% | |
| GTTACAATGCTGCTCAAACA+TGG | - | chr8_2:39872732-39872751 | Msa1247290:intron | 40.0% | |
| GTATGTGTGACAAAACTTGG+TGG | - | chr8_2:39872795-39872814 | Msa1247290:intron | 40.0% | |
| TCCGTGTGTAAATGTCCAAA+AGG | + | chr8_2:39873001-39873020 | None:intergenic | 40.0% | |
| ! | TTTTGGACATTTACACACGG+AGG | - | chr8_2:39873000-39873019 | Msa1247290:intron | 40.0% |
| TCCCCCTTTCTGTTTATATG+TGG | - | chr8_2:39873077-39873096 | Msa1247290:intron | 40.0% | |
| ! | TTTGGTGATAGGTTGTACTC+AGG | - | chr8_2:39873134-39873153 | Msa1247290:intron | 40.0% |
| TGATAGGTTGTACTCAGGAT+TGG | - | chr8_2:39873139-39873158 | Msa1247290:intron | 40.0% | |
| !! | CTTTTCTGGAAGAACTGAAC+AGG | - | chr8_2:39873225-39873244 | Msa1247290:intron | 40.0% |
| TGGAAGAACTGAACAGGAAA+TGG | - | chr8_2:39873231-39873250 | Msa1247290:intron | 40.0% | |
| AAGACTCCTGTTCATGAACT+CGG | - | chr8_2:39873332-39873351 | Msa1247290:intron | 40.0% | |
| TTAGTACATAGTGAACGCAC+TGG | - | chr8_2:39873428-39873447 | Msa1247290:intron | 40.0% | |
| GGATAGAGTTAGCCATTACA+TGG | - | chr8_2:39873652-39873671 | Msa1247290:intron | 40.0% | |
| !! | CGGTCTTTTGAAAATACGAG+AGG | - | chr8_2:39873841-39873860 | Msa1247290:intron | 40.0% |
| AGGTGATGACTTCACACATA+AGG | - | chr8_2:39873861-39873880 | Msa1247290:intron | 40.0% | |
| GGTGATGACTTCACACATAA+GGG | - | chr8_2:39873862-39873881 | Msa1247290:intron | 40.0% | |
| ACTTCACACATAAGGGAATC+TGG | - | chr8_2:39873869-39873888 | Msa1247290:intron | 40.0% | |
| ACTTGTCATTGTTGAATGCC+AGG | + | chr8_2:39873991-39874010 | None:intergenic | 40.0% | |
| ! | ACGAGGAATTCAAAGCATTC+TGG | + | chr8_2:39874018-39874037 | None:intergenic | 40.0% |
| ! | TGAAATGAACTCTGGAGAAC+GGG | + | chr8_2:39874065-39874084 | None:intergenic | 40.0% |
| ! | GTGAAATGAACTCTGGAGAA+CGG | + | chr8_2:39874066-39874085 | None:intergenic | 40.0% |
| AAACTTCGTAAGGGTCTGAA+AGG | - | chr8_2:39874100-39874119 | Msa1247290:intron | 40.0% | |
| AACTTCGTAAGGGTCTGAAA+GGG | - | chr8_2:39874101-39874120 | Msa1247290:intron | 40.0% | |
| ATAAACAGCATCTGGCAAAG+AGG | - | chr8_2:39874212-39874231 | Msa1247290:intron | 40.0% | |
| ! | GAGGCTTTTGTCTGGAAAAA+CGG | - | chr8_2:39874231-39874250 | Msa1247290:intron | 40.0% |
| TACAGACATGAAAACCTCTC+AGG | - | chr8_2:39874339-39874358 | Msa1247290:intron | 40.0% | |
| CAAAGTGCAGATATTTCCAC+TGG | + | chr8_2:39874481-39874500 | None:intergenic | 40.0% | |
| TATTACCTTGGCACACATAC+TGG | - | chr8_2:39874517-39874536 | Msa1247290:intron | 40.0% | |
| GCAGACTTAAAAGCAACCTT+TGG | - | chr8_2:39874574-39874593 | Msa1247290:intron | 40.0% | |
| ! | CTTAAAAGCAACCTTTGGGA+AGG | - | chr8_2:39874579-39874598 | Msa1247290:intron | 40.0% |
| CATAAGGACACACATTTGGT+AGG | + | chr8_2:39874632-39874651 | None:intergenic | 40.0% | |
| TGCAGACATCTCTTAAGATC+CGG | + | chr8_2:39874718-39874737 | None:intergenic | 40.0% | |
| GGGAAGAAATGTCCTTAGAA+AGG | - | chr8_2:39874756-39874775 | Msa1247290:intron | 40.0% | |
| GATGAGTAAAGATGTTGGTG+AGG | - | chr8_2:39874783-39874802 | Msa1247290:intron | 40.0% | |
| AGGAACTGTAGTTGCACAAA+AGG | - | chr8_2:39874861-39874880 | Msa1247290:intron | 40.0% | |
| ! | AGTTTCCTGTTTCTCAGGTT+CGG | + | chr8_2:39874890-39874909 | None:intergenic | 40.0% |
| AACCTGAGAAACAGGAAACT+CGG | - | chr8_2:39874890-39874909 | Msa1247290:intron | 40.0% | |
| GAGGTTGTAGCAACAAGGAT+AGG | + | chr8_2:39868562-39868581 | None:intergenic | 45.0% | |
| TCGATGAGGTTGTAGCAACA+AGG | + | chr8_2:39868567-39868586 | None:intergenic | 45.0% | |
| TGGATGTTGTGTTGGATGTG+TGG | - | chr8_2:39869192-39869211 | Msa1247290:CDS | 45.0% | |
| GGATGTGTGGTTAGACTAGA+TGG | - | chr8_2:39869205-39869224 | Msa1247290:CDS | 45.0% | |
| ACAATAGGCTTAGGTGGTCT+GGG | - | chr8_2:39869290-39869309 | Msa1247290:CDS | 45.0% | |
| GGATCTCGAGATTAACGAGT+TGG | - | chr8_2:39869429-39869448 | Msa1247290:CDS | 45.0% | |
| ATGTAGCCAACCACACTTAG+TGG | - | chr8_2:39869493-39869512 | Msa1247290:CDS | 45.0% | |
| TGTAGCCAACCACACTTAGT+GGG | - | chr8_2:39869494-39869513 | Msa1247290:CDS | 45.0% | |
| CTTATCCCACTAAGTGTGGT+TGG | + | chr8_2:39869502-39869521 | None:intergenic | 45.0% | |
| CAACCACACTTAGTGGGATA+AGG | - | chr8_2:39869500-39869519 | Msa1247290:CDS | 45.0% | |
| GTTGCTCGTCAAAAAAACGG+GGG | - | chr8_2:39869653-39869672 | Msa1247290:CDS | 45.0% | |
| TTGCTCGTCAAAAAAACGGG+GGG | - | chr8_2:39869654-39869673 | Msa1247290:CDS | 45.0% | |
| ! | TCTCCCCACTCTTTTTCTCA+CGG | + | chr8_2:39869741-39869760 | None:intergenic | 45.0% |
| TACATGCTGCAAGCAACTAG+CGG | + | chr8_2:39869785-39869804 | None:intergenic | 45.0% | |
| CATCTGATGAGAGGGAACAA+CGG | - | chr8_2:39870102-39870121 | Msa1247290:CDS | 45.0% | |
| ATCTGATGAGAGGGAACAAC+GGG | - | chr8_2:39870103-39870122 | Msa1247290:CDS | 45.0% | |
| TCCTAGCTAAGATCACTCAG+AGG | - | chr8_2:39870194-39870213 | Msa1247290:CDS | 45.0% | |
| CCTAGCTAAGATCACTCAGA+GGG | - | chr8_2:39870195-39870214 | Msa1247290:CDS | 45.0% | |
| CTAGCTAAGATCACTCAGAG+GGG | - | chr8_2:39870196-39870215 | Msa1247290:CDS | 45.0% | |
| TAAGATCACTCAGAGGGGTA+TGG | - | chr8_2:39870201-39870220 | Msa1247290:CDS | 45.0% | |
| GTATGGAATGACAGCAAGCA+TGG | - | chr8_2:39870218-39870237 | Msa1247290:CDS | 45.0% | |
| TTTGATGGAACTGACCAAGG+AGG | - | chr8_2:39870255-39870274 | Msa1247290:CDS | 45.0% | |
| ! | GAACTCCTTTGGAAGAAAGG+AGG | - | chr8_2:39870653-39870672 | Msa1247290:intron | 45.0% |
| ! | ACTCCTTTGGAAGAAAGGAG+GGG | - | chr8_2:39870655-39870674 | Msa1247290:intron | 45.0% |
| TTTCCCCTCCTTTCTTCCAA+AGG | + | chr8_2:39870661-39870680 | None:intergenic | 45.0% | |
| GAAGAAAGGAGGGGAAACAT+GGG | - | chr8_2:39870664-39870683 | Msa1247290:intron | 45.0% | |
| ATGGGACTCATACAATTGGC+AGG | - | chr8_2:39870682-39870701 | Msa1247290:intron | 45.0% | |
| !! | GGAGGTGTTCAGATAAATGC+TGG | - | chr8_2:39871041-39871060 | Msa1247290:intron | 45.0% |
| ! | TAAATGCTGGAGTTTGAGGC+TGG | - | chr8_2:39871054-39871073 | Msa1247290:intron | 45.0% |
| ACAATGTTCATGGGGCTTGA+TGG | - | chr8_2:39871587-39871606 | Msa1247290:intron | 45.0% | |
| CAATGTTCATGGGGCTTGAT+GGG | - | chr8_2:39871588-39871607 | Msa1247290:intron | 45.0% | |
| AATGTTCATGGGGCTTGATG+GGG | - | chr8_2:39871589-39871608 | Msa1247290:intron | 45.0% | |
| AGTAGTCAATATTGGCCAGG+AGG | - | chr8_2:39871746-39871765 | Msa1247290:intron | 45.0% | |
| TGGAGCATAGAGCTCAGTAA+GGG | + | chr8_2:39871777-39871796 | None:intergenic | 45.0% | |
| TTGGAGCATAGAGCTCAGTA+AGG | + | chr8_2:39871778-39871797 | None:intergenic | 45.0% | |
| CTATGCTCCAAGTGACTCTT+AGG | - | chr8_2:39871787-39871806 | Msa1247290:intron | 45.0% | |
| ATGCTCTCCTAAGAGTCACT+TGG | + | chr8_2:39871797-39871816 | None:intergenic | 45.0% | |
| !! | AGGAGAGCATTTCAGCATTG+CGG | - | chr8_2:39871807-39871826 | Msa1247290:intron | 45.0% |
| GCATGGAGAACCACAAATGT+GGG | - | chr8_2:39871829-39871848 | Msa1247290:intron | 45.0% | |
| AGCGAGGACTGATGACAAAT+GGG | + | chr8_2:39871929-39871948 | None:intergenic | 45.0% | |
| AACTTGTGTGCACAACGCAA+AGG | + | chr8_2:39871990-39872009 | None:intergenic | 45.0% | |
| GATGGGCACAAGAAGATTGA+AGG | + | chr8_2:39872022-39872041 | None:intergenic | 45.0% | |
| ACAACTGCTTACCGGAATGA+AGG | + | chr8_2:39872293-39872312 | None:intergenic | 45.0% | |
| ACAAACTGGTCAACCTAGAG+GGG | + | chr8_2:39872419-39872438 | None:intergenic | 45.0% | |
| GAACAAACTGGTCAACCTAG+AGG | + | chr8_2:39872421-39872440 | None:intergenic | 45.0% | |
| TCTATTGAAGCAGCTCAAGG+AGG | - | chr8_2:39873200-39873219 | Msa1247290:intron | 45.0% | |
| ! | AGCTCAAGGAGGATCTTTTC+TGG | - | chr8_2:39873211-39873230 | Msa1247290:intron | 45.0% |
| !! | ACAGGAGTCTTTTTGGCACT+TGG | + | chr8_2:39873323-39873342 | None:intergenic | 45.0% |
| AGACTCCTGTTCATGAACTC+GGG | - | chr8_2:39873333-39873352 | Msa1247290:intron | 45.0% | |
| ATTCCAACCAGATCAGGACT+CGG | - | chr8_2:39873384-39873403 | Msa1247290:intron | 45.0% | |
| ATCCAGTTGAGTTTGTGCAG+AGG | - | chr8_2:39873927-39873946 | Msa1247290:intron | 45.0% | |
| ! | AAATGAACTCTGGAGAACGG+GGG | + | chr8_2:39874063-39874082 | None:intergenic | 45.0% |
| ! | GAAATGAACTCTGGAGAACG+GGG | + | chr8_2:39874064-39874083 | None:intergenic | 45.0% |
| ACTTCGTAAGGGTCTGAAAG+GGG | - | chr8_2:39874102-39874121 | Msa1247290:intron | 45.0% | |
| GGATGATGTAGAGGTTACTC+TGG | - | chr8_2:39874132-39874151 | Msa1247290:intron | 45.0% | |
| TGTAGAGGTTACTCTGGACA+AGG | - | chr8_2:39874138-39874157 | Msa1247290:intron | 45.0% | |
| GTTAAGCTCAAGACCGAATG+TGG | - | chr8_2:39874283-39874302 | Msa1247290:intron | 45.0% | |
| ACTGTCCAGGTTCTTACAAC+AGG | - | chr8_2:39874418-39874437 | Msa1247290:intron | 45.0% | |
| CTGTCCAGGTTCTTACAACA+GGG | - | chr8_2:39874419-39874438 | Msa1247290:intron | 45.0% | |
| AAGACCCTGTTGTAAGAACC+TGG | + | chr8_2:39874426-39874445 | None:intergenic | 45.0% | |
| AGGTTCTTACAACAGGGTCT+TGG | - | chr8_2:39874425-39874444 | Msa1247290:intron | 45.0% | |
| TATTACATGCAACCTGCCAG+TGG | - | chr8_2:39874462-39874481 | Msa1247290:intron | 45.0% | |
| CTGCACTTTGCGAGAAGTTT+CGG | - | chr8_2:39874491-39874510 | Msa1247290:intron | 45.0% | |
| ATACTGGCAGGAGATTGTCA+TGG | - | chr8_2:39874533-39874552 | Msa1247290:intron | 45.0% | |
| !! | TACTCATCGGCTCCTTTCTA+AGG | + | chr8_2:39874771-39874790 | None:intergenic | 45.0% |
| GAGCCGATGAGTAAAGATGT+TGG | - | chr8_2:39874778-39874797 | Msa1247290:intron | 45.0% | |
| TTTCCTTGCGAATCCAACAG+AGG | - | chr8_2:39875035-39875054 | Msa1247290:CDS | 45.0% | |
| ATGCGTTTCTTGACCTCTGT+TGG | + | chr8_2:39875051-39875070 | None:intergenic | 45.0% | |
| GCATTGAGTCTCTCATTGAG+CGG | - | chr8_2:39875067-39875086 | Msa1247290:exon | 45.0% | |
| CATTGAGTCTCTCATTGAGC+GGG | - | chr8_2:39875068-39875087 | Msa1247290:exon | 45.0% | |
| ! | TCTCATTGAGCGGGACTTTT+TGG | - | chr8_2:39875077-39875096 | Msa1247290:five_prime_UTR | 45.0% |
| CTGTCGTGGACAATAGGCTT+AGG | - | chr8_2:39869281-39869300 | Msa1247290:CDS | 50.0% | |
| TCGTGGACAATAGGCTTAGG+TGG | - | chr8_2:39869284-39869303 | Msa1247290:CDS | 50.0% | |
| GACAATAGGCTTAGGTGGTC+TGG | - | chr8_2:39869289-39869308 | Msa1247290:CDS | 50.0% | |
| GGAAGCTAAGCTCCCTTTCT+TGG | - | chr8_2:39870001-39870020 | Msa1247290:CDS | 50.0% | |
| AGCTAAGCTCCCTTTCTTGG+AGG | - | chr8_2:39870004-39870023 | Msa1247290:CDS | 50.0% | |
| TCTGATGAGAGGGAACAACG+GGG | - | chr8_2:39870104-39870123 | Msa1247290:CDS | 50.0% | |
| CCCTCTGAGTGATCTTAGCT+AGG | + | chr8_2:39870198-39870217 | None:intergenic | 50.0% | |
| TGGAATGACAGCAAGCATGG+TGG | - | chr8_2:39870221-39870240 | Msa1247290:CDS | 50.0% | |
| !! | GTGGACGTGGCCTTATTTGA+TGG | - | chr8_2:39870240-39870259 | Msa1247290:CDS | 50.0% |
| ATGGAACTGACCAAGGAGGA+TGG | - | chr8_2:39870259-39870278 | Msa1247290:CDS | 50.0% | |
| CTCTTGTTCTCCATCCTCCT+TGG | + | chr8_2:39870272-39870291 | None:intergenic | 50.0% | |
| AGGAGGATGGAGAACAAGAG+TGG | - | chr8_2:39870272-39870291 | Msa1247290:CDS | 50.0% | |
| ACAGGTTCATGTTCTCAGGG+AGG | - | chr8_2:39870402-39870421 | Msa1247290:CDS | 50.0% | |
| GCTCAAGTTCCACATCGAGA+TGG | + | chr8_2:39870550-39870569 | None:intergenic | 50.0% | |
| GGAAGAAAGGAGGGGAAACA+TGG | - | chr8_2:39870663-39870682 | Msa1247290:intron | 50.0% | |
| AGCATTTCAGCATTGCGGCA+TGG | - | chr8_2:39871812-39871831 | Msa1247290:intron | 50.0% | |
| GGCATGGAGAACCACAAATG+TGG | - | chr8_2:39871828-39871847 | Msa1247290:intron | 50.0% | |
| GACGTAAGGACCCACATTTG+TGG | + | chr8_2:39871842-39871861 | None:intergenic | 50.0% | |
| ! | GCGCCAGAATAAGTTTGCTC+AGG | + | chr8_2:39871891-39871910 | None:intergenic | 50.0% |
| CAGCGAGGACTGATGACAAA+TGG | + | chr8_2:39871930-39871949 | None:intergenic | 50.0% | |
| TTCAGCCCGAGTTCATGAAC+AGG | + | chr8_2:39873341-39873360 | None:intergenic | 50.0% | |
| ATGAACTCGGGCTGAATCTG+TGG | - | chr8_2:39873345-39873364 | Msa1247290:intron | 50.0% | |
| TCGGCTACTGAACACACTTC+TGG | - | chr8_2:39873403-39873422 | Msa1247290:intron | 50.0% | |
| ! | GAGGCGTCTGAATGAGGAAA+TGG | - | chr8_2:39873631-39873650 | Msa1247290:intron | 50.0% |
| CAGTCTCGGGATCCATGTAA+TGG | + | chr8_2:39873667-39873686 | None:intergenic | 50.0% | |
| TTGTTCCGTCGTGTAACCGA+CGG | - | chr8_2:39873821-39873840 | Msa1247290:intron | 50.0% | |
| ! | AAAGACCGTCGGTTACACGA+CGG | + | chr8_2:39873829-39873848 | None:intergenic | 50.0% |
| AGCCTCTGCACAAACTCAAC+TGG | + | chr8_2:39873932-39873951 | None:intergenic | 50.0% | |
| GGTCAACGAGGATGATGTAG+AGG | - | chr8_2:39874123-39874142 | Msa1247290:intron | 50.0% | |
| ! | CTGGCAAAGAGGCTTTTGTC+TGG | - | chr8_2:39874223-39874242 | Msa1247290:intron | 50.0% |
| AACCTCTCAGGACACAATGC+AGG | - | chr8_2:39874351-39874370 | Msa1247290:intron | 50.0% | |
| ACCTCTCAGGACACAATGCA+GGG | - | chr8_2:39874352-39874371 | Msa1247290:intron | 50.0% | |
| AGAACCTGGACAGTAAGCGT+AGG | + | chr8_2:39874412-39874431 | None:intergenic | 50.0% | |
| GTGCAGATATTTCCACTGGC+AGG | + | chr8_2:39874477-39874496 | None:intergenic | 50.0% | |
| ATGCTTCTGACCCTTCCCAA+AGG | + | chr8_2:39874593-39874612 | None:intergenic | 50.0% | |
| CATCTCTTAAGATCCGGAGC+AGG | + | chr8_2:39874712-39874731 | None:intergenic | 50.0% | |
| GGAATCCGAACCTGAGAAAC+AGG | - | chr8_2:39874882-39874901 | Msa1247290:intron | 50.0% | |
| ! | TGCCGAGTTTCCTGTTTCTC+AGG | + | chr8_2:39874895-39874914 | None:intergenic | 50.0% |
| TGACCTCTGTTGGATTCGCA+AGG | + | chr8_2:39875041-39875060 | None:intergenic | 50.0% | |
| !! | TTGAGCGGGACTTTTTGGAG+AGG | - | chr8_2:39875082-39875101 | Msa1247290:five_prime_UTR | 50.0% |
| !! | TGAGCGGGACTTTTTGGAGA+GGG | - | chr8_2:39875083-39875102 | Msa1247290:five_prime_UTR | 50.0% |
| CTGATGAGAGGGAACAACGG+GGG | - | chr8_2:39870105-39870124 | Msa1247290:CDS | 55.0% | |
| ! | AACAACGGGGGTAGTGGTCA+GGG | - | chr8_2:39870117-39870136 | Msa1247290:CDS | 55.0% |
| GGTTCATGTTCTCAGGGAGG+AGG | - | chr8_2:39870405-39870424 | Msa1247290:CDS | 55.0% | |
| TAGCCGAGTCCTGATCTGGT+TGG | + | chr8_2:39873390-39873409 | None:intergenic | 55.0% | |
| TCAGTAGCCGAGTCCTGATC+TGG | + | chr8_2:39873394-39873413 | None:intergenic | 55.0% | |
| !! | AGCTGAGAGGCGTCTGAATG+AGG | - | chr8_2:39873625-39873644 | Msa1247290:intron | 55.0% |
| TATGCCAGCCACCCTGACTT+AGG | - | chr8_2:39874379-39874398 | Msa1247290:intron | 55.0% | |
| TAGGACCGTCGCCTAAGTCA+GGG | + | chr8_2:39874393-39874412 | None:intergenic | 55.0% | |
| ACCTTGGCACACATACTGGC+AGG | - | chr8_2:39874521-39874540 | Msa1247290:intron | 55.0% | |
| TCCTGCCAGTATGTGTGCCA+AGG | + | chr8_2:39874525-39874544 | None:intergenic | 55.0% | |
| AGCGACTGAGATTCCTGCTC+CGG | - | chr8_2:39874696-39874715 | Msa1247290:intron | 55.0% | |
| GGACAGGAAGCCTCAGATTG+AGG | - | chr8_2:39874927-39874946 | Msa1247290:CDS | 55.0% | |
| CAGGAAGCCTCAGATTGAGG+CGG | - | chr8_2:39874930-39874949 | Msa1247290:CDS | 55.0% | |
| ACTATCGCCGCCTCAATCTG+AGG | + | chr8_2:39874940-39874959 | None:intergenic | 55.0% | |
| AGATTGAGGCGGCGATAGTG+AGG | - | chr8_2:39874941-39874960 | Msa1247290:CDS | 55.0% | |
| AGGCTTAGGTGGTCTGGGCA+TGG | - | chr8_2:39869295-39869314 | Msa1247290:CDS | 60.0% | |
| AGAGGGAACAACGGGGGTAG+TGG | - | chr8_2:39870111-39870130 | Msa1247290:CDS | 60.0% | |
| ! | GAACAACGGGGGTAGTGGTC+AGG | - | chr8_2:39870116-39870135 | Msa1247290:CDS | 60.0% |
| !! | GGAGGCGCTACCCATGAGAA+TGG | - | chr8_2:39870138-39870157 | Msa1247290:CDS | 60.0% |
| GGCGCTACCCATGAGAATGG+AGG | - | chr8_2:39870141-39870160 | Msa1247290:CDS | 60.0% | |
| !! | GACAGCAAGCATGGTGGACG+TGG | - | chr8_2:39870227-39870246 | Msa1247290:CDS | 60.0% |
| TCAGTAAGGGAGCAGCCTCC+TGG | + | chr8_2:39871764-39871783 | None:intergenic | 60.0% | |
| GGGTCTGAAAGGGGTCAACG+AGG | - | chr8_2:39874111-39874130 | Msa1247290:intron | 60.0% | |
| GCCCTGCATTGTGTCCTGAG+AGG | + | chr8_2:39874356-39874375 | None:intergenic | 60.0% | |
| AGCCACCCTGACTTAGGCGA+CGG | - | chr8_2:39874385-39874404 | Msa1247290:intron | 60.0% | |
| GTAGGACCGTCGCCTAAGTC+AGG | + | chr8_2:39874394-39874413 | None:intergenic | 60.0% | |
| CGGTCCTACGCTTACTGTCC+AGG | - | chr8_2:39874405-39874424 | Msa1247290:intron | 60.0% | |
| ACAGGAAACTCGGCAGCGAG+TGG | - | chr8_2:39874900-39874919 | Msa1247290:intron | 60.0% | |
| ! | AACGGGGGTAGTGGTCAGGG+AGG | - | chr8_2:39870120-39870139 | Msa1247290:CDS | 65.0% |
| GTCGCCTAAGTCAGGGTGGC+TGG | + | chr8_2:39874386-39874405 | None:intergenic | 65.0% | |
| GACCGTCGCCTAAGTCAGGG+TGG | + | chr8_2:39874390-39874409 | None:intergenic | 65.0% | |
| GGAAACTCGGCAGCGAGTGG+AGG | - | chr8_2:39874903-39874922 | Msa1247290:intron | 65.0% | |
| AACTCGGCAGCGAGTGGAGG+AGG | - | chr8_2:39874906-39874925 | Msa1247290:intron | 65.0% | |
| GGCAGCGAGTGGAGGAGGAC+AGG | - | chr8_2:39874911-39874930 | Msa1247290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 39868328 | 39875355 | 39868328 | ID=Msa1247290;Name=Msa1247290 |
| chr8_2 | mRNA | 39868328 | 39875355 | 39868328 | ID=Msa1247290-mRNA-1;Parent=Msa1247290;Name=Msa1247290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=279|1|1|1|1|1|2|212|732 |
| chr8_2 | exon | 39868328 | 39870577 | 39868328 | ID=Msa1247290-mRNA-1:exon:12275;Parent=Msa1247290-mRNA-1 |
| chr8_2 | exon | 39874916 | 39875355 | 39874916 | ID=Msa1247290-mRNA-1:exon:12274;Parent=Msa1247290-mRNA-1 |
| chr8_2 | five_prime_UTR | 39875077 | 39875355 | 39875077 | ID=Msa1247290-mRNA-1:five_prime_utr;Parent=Msa1247290-mRNA-1 |
| chr8_2 | CDS | 39874916 | 39875076 | 39874916 | ID=Msa1247290-mRNA-1:cds;Parent=Msa1247290-mRNA-1 |
| chr8_2 | CDS | 39868540 | 39870577 | 39868540 | ID=Msa1247290-mRNA-1:cds;Parent=Msa1247290-mRNA-1 |
| chr8_2 | three_prime_UTR | 39868328 | 39868539 | 39868328 | ID=Msa1247290-mRNA-1:three_prime_utr;Parent=Msa1247290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
