AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1288450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288450 MtrunA17_Chr8g0361901 97.678 732 16 1 1 732 1 731 0.0 1488
Msa1288450 MtrunA17_Chr5g0416711 81.421 732 136 0 1 732 1 732 0.0 1261
Msa1288450 MtrunA17_Chr6g0453061 77.915 729 160 1 5 732 2 730 0.0 1179
Msa1288450 MtrunA17_Chr1g0166181 76.828 725 162 3 11 732 18 739 0.0 1160
Msa1288450 MtrunA17_Chr1g0166131 75.862 725 169 3 11 732 19 740 0.0 1132
Msa1288450 MtrunA17_Chr6g0453081 74.074 729 188 1 5 732 2 730 0.0 1115
Msa1288450 MtrunA17_Chr7g0231701 77.941 680 139 2 53 732 40 708 0.0 1102
Msa1288450 MtrunA17_Chr1g0166141 78.428 598 127 1 137 732 77 674 0.0 973
Msa1288450 MtrunA17_Chr1g0166141 81.579 76 14 0 278 353 1 76 6.55e-32 132
Msa1288450 MtrunA17_Chr7g0231741 86.290 372 51 0 361 732 4 375 0.0 680
Msa1288450 MtrunA17_Chr5g0416731 70.048 414 79 2 53 421 25 438 0.0 582
Msa1288450 MtrunA17_Chr7g0231721 75.988 329 72 2 53 380 25 347 9.55e-179 514
Msa1288450 MtrunA17_Chr7g0231751 77.097 310 71 0 1 310 1 310 7.40e-178 510
Msa1288450 MtrunA17_Chr5g0416691 62.035 403 147 3 332 732 3 401 8.99e-178 513
Msa1288450 MtrunA17_Chr2g0285881 40.296 742 410 14 4 732 71 792 5.84e-177 526
Msa1288450 MtrunA17_Chr7g0231791 62.035 403 147 3 332 732 3 401 3.27e-176 509
Msa1288450 MtrunA17_Chr5g0416831 74.847 326 45 2 407 732 1 289 1.74e-169 488
Msa1288450 MtrunA17_Chr5g0416901 71.609 317 89 1 55 371 21 336 1.80e-163 475
Msa1288450 MtrunA17_Chr7g0231581 71.565 313 88 1 59 371 1 312 9.95e-163 472
Msa1288450 MtrunA17_Chr2g0296381 34.085 710 429 14 52 732 43 742 2.46e-130 404
Msa1288450 MtrunA17_Chr4g0067011 32.765 763 463 15 1 732 1 744 3.43e-127 395
Msa1288450 MtrunA17_Chr7g0231571 71.951 246 68 1 59 304 1 245 4.95e-124 370
Msa1288450 MtrunA17_Chr5g0416911 68.400 250 78 1 55 304 5 253 7.27e-119 357
Msa1288450 MtrunA17_Chr7g0268881 39.440 393 224 6 347 732 4 389 2.11e-83 270
Msa1288450 MtrunA17_Chr7g0231801 52.191 251 118 2 59 307 1 251 6.74e-82 261
Msa1288450 MtrunA17_Chr5g0416681 52.191 251 118 2 59 307 1 251 4.05e-81 259
Msa1288450 MtrunA17_Chr5g0416931 72.727 165 45 0 53 217 38 202 1.34e-80 255
Msa1288450 MtrunA17_Chr1g0166151 66.304 184 61 1 83 266 1 183 1.30e-79 252
Msa1288450 MtrunA17_Chr7g0231561 70.807 161 47 0 59 219 1 161 2.40e-77 245
Msa1288450 MtrunA17_Chr5g0416841 75.258 97 24 0 205 301 12 108 8.96e-47 161
Msa1288450 MtrunA17_Chr7g0268891 28.939 311 202 7 26 320 9 316 4.76e-38 145
Msa1288450 MtrunA17_Chr5g0416721 72.222 54 15 0 1 54 1 54 5.01e-21 87.4
Msa1288450 MtrunA17_Chr7g0231731 70.370 54 16 0 1 54 1 54 2.57e-20 85.1
Msa1288450 MtrunA17_Chr7g0231711 66.667 54 17 1 1 54 1 53 1.90e-17 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1288450 AT1G26830.1 82.104 732 131 0 1 732 1 732 0.0 1288
Msa1288450 AT1G69670.1 81.557 732 135 0 1 732 1 732 0.0 1278
Msa1288450 AT1G69670.2 81.557 732 135 0 1 732 1 732 0.0 1278
Msa1288450 AT5G46210.1 39.702 738 420 13 4 732 71 792 3.51e-168 503
Msa1288450 AT4G02570.4 33.946 707 431 13 52 732 42 738 1.09e-132 410
Msa1288450 AT4G02570.2 33.946 707 431 13 52 732 42 738 1.09e-132 410
Msa1288450 AT4G02570.1 33.946 707 431 13 52 732 42 738 1.09e-132 410
Msa1288450 AT4G02570.3 33.946 707 431 13 52 732 42 738 1.09e-132 410
Msa1288450 AT1G02980.1 32.349 711 442 14 51 732 42 742 1.31e-115 365
Msa1288450 AT1G02980.2 32.349 711 442 14 51 732 42 742 1.31e-115 365
Msa1288450 AT1G43140.1 32.240 701 425 17 52 732 51 721 4.97e-104 335
Msa1288450 AT1G59790.2 26.235 324 223 8 52 366 48 364 1.02e-29 122
Msa1288450 AT1G59790.1 26.619 278 192 7 52 320 48 322 2.94e-27 114
Msa1288450 AT1G59800.1 29.775 178 120 2 80 254 72 247 3.25e-22 97.1
Msa1288450 AT4G12100.1 23.003 313 206 10 24 317 76 372 2.38e-15 79.7
Msa1288450 AT3G46910.1 24.280 243 155 7 11 229 7 244 6.94e-12 66.6

Find 165 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTCTCATCGATCGATTT+AGG 0.123034 8_3:-41393968 Msa1288450:five_prime_UTR
ACAACAATTATTTCATTATT+AGG 0.131586 8_3:+41394027 None:intergenic
ACTGGATCCTTCAATCTTTC+AGG 0.166080 8_3:+41388981 None:intergenic
AATATGGTGCTTCACAAATT+TGG 0.198790 8_3:-41389776 Msa1288450:CDS
CACAACACTCAATGAATCTT+TGG 0.228824 8_3:+41389312 None:intergenic
AATCAATGGGTCTACTTAAA+AGG 0.234531 8_3:+41387672 None:intergenic
ACTTAGGATAAAATTATTAA+TGG 0.235468 8_3:+41394070 None:intergenic
TCTGAAAATTCTTCTTCTTC+TGG 0.255367 8_3:+41393926 None:intergenic
TACTCATCGGCTCCTTTCTA+AGG 0.269735 8_3:+41388124 None:intergenic
CAACAATTATTTCATTATTA+GGG 0.281402 8_3:+41394028 None:intergenic
ATCTCTCATCGATCGATTTA+GGG 0.281939 8_3:-41393967 Msa1288450:five_prime_UTR
TTAGCTTTGAAGAACTTTAC+AGG 0.291791 8_3:-41393795 Msa1288450:intron
TTAATCCATATGGAGAATTC+TGG 0.298338 8_3:-41389149 Msa1288450:CDS
AAACTATACAAGGTTAAAAT+AGG 0.302125 8_3:-41388051 Msa1288450:CDS
ACAATCATTGGCTTTAGTTA+AGG 0.303291 8_3:-41388157 Msa1288450:CDS
GACTGTGTTTGCTTCAGATT+TGG 0.306722 8_3:+41394142 None:intergenic
TGATGATAAATATGAAGATT+TGG 0.316741 8_3:-41389108 Msa1288450:CDS
CAATCATTGGCTTTAGTTAA+GGG 0.333046 8_3:-41388156 Msa1288450:CDS
ACGAGGAATTCAAAGCATTC+TGG 0.343800 8_3:+41388877 None:intergenic
AAAACATCGCAACAACAAAT+AGG 0.345811 8_3:+41387627 None:intergenic
GCAGACTTAAAAGCAACCTT+TGG 0.354772 8_3:-41388318 Msa1288450:CDS
CTGCACTTTGCGAGAAGTTT+CGG 0.357858 8_3:-41388401 Msa1288450:CDS
CATGTCTTATCTGCATATTT+CGG 0.358065 8_3:+41393871 None:intergenic
TCGGCTACTGAACACACTTC+TGG 0.360939 8_3:-41389489 Msa1288450:CDS
TAAGAGATGTCTACAATCAT+TGG 0.371194 8_3:-41388169 Msa1288450:CDS
TCAGTTTACATCAAAATTAG+AGG 0.377339 8_3:-41388583 Msa1288450:CDS
GTTTAAGCATAGGGTTGTTA+TGG 0.383121 8_3:-41393896 Msa1288450:CDS
GGAATCTGAACCTGAGAAAC+AGG 0.384843 8_3:-41388010 Msa1288450:CDS
ATGCGTTTCTTGACCTCTGT+TGG 0.385513 8_3:+41387844 None:intergenic
TGCCGAGTTTCCTGTTTCTC+AGG 0.386423 8_3:+41388000 None:intergenic
TGGAAGAACTGAACAGGAAA+TGG 0.387376 8_3:-41389661 Msa1288450:CDS
ACTGTCCAGGTTCTTACAAC+AGG 0.395150 8_3:-41388474 Msa1288450:CDS
TCAATATACATTGAAATCAA+TGG 0.397685 8_3:+41387658 None:intergenic
TGAAATGAACTCTGGAGAAC+GGG 0.408147 8_3:+41388830 None:intergenic
GTAGGACCGTCGCCTAAGTC+AGG 0.411159 8_3:+41388501 None:intergenic
TCATTTATTCCAACCAGATC+AGG 0.420558 8_3:-41389514 Msa1288450:CDS
GATAAAATTATTAATGGTGG+TGG 0.421341 8_3:+41394076 None:intergenic
TATTACCTTGGCACACATAC+TGG 0.423807 8_3:-41388375 Msa1288450:CDS
ACAACACTCAATGAATCTTT+GGG 0.423919 8_3:+41389313 None:intergenic
CAGCATTATTGAAAAGCATA+AGG 0.426039 8_3:+41388247 None:intergenic
GATGATAAATATGAAGATTT+GGG 0.429458 8_3:-41389107 Msa1288450:CDS
AGCCTCTGCACAAACTCAAC+TGG 0.433380 8_3:+41388963 None:intergenic
CATGCTCAGATTAATCCATA+TGG 0.434059 8_3:-41389159 Msa1288450:CDS
ACTTCACACATAAGGGAATC+TGG 0.436605 8_3:-41389023 Msa1288450:CDS
AGGAACTGTAGTTGCACAAA+AGG 0.436933 8_3:-41388031 Msa1288450:CDS
GTCGCCTAAGTCAGGGTGGC+TGG 0.440169 8_3:+41388509 None:intergenic
TACTGATCCTGAAAGATTGA+AGG 0.441993 8_3:-41388988 Msa1288450:CDS
ACTTGTCATTGTTGAATGCC+AGG 0.444070 8_3:+41388904 None:intergenic
AACTCGGCAGCGAGTGGAGG+AGG 0.446158 8_3:-41387986 Msa1288450:CDS
AAAGCATAAGGACACACATT+TGG 0.448174 8_3:+41388259 None:intergenic
GGCAGCGAGTGGAGGAGGAC+AGG 0.448240 8_3:-41387981 Msa1288450:CDS
GAAGTATTATAAACAGCATC+TGG 0.448249 8_3:-41388688 Msa1288450:CDS
ATTCAGAAATGCATACAATA+TGG 0.452155 8_3:-41389792 Msa1288450:intron
GATTGAAGCGTTTAAGCATA+GGG 0.453200 8_3:-41393905 Msa1288450:CDS
CTAAACCAGAATTCTCCATA+TGG 0.453764 8_3:+41389144 None:intergenic
CAATATACATTGAAATCAAT+GGG 0.463169 8_3:+41387659 None:intergenic
TAGTGAGGATCATGAAATCT+AGG 0.463511 8_3:-41387936 Msa1288450:CDS
TATGCCAGCCACCCTGACTT+AGG 0.464316 8_3:-41388513 Msa1288450:CDS
TGCTTCACAAATTTGGTGAT+AGG 0.469912 8_3:-41389769 Msa1288450:CDS
TGTAGATGATAAACTTCGTA+AGG 0.470956 8_3:-41388802 Msa1288450:CDS
AGCAACTGAGATTCCTGCTC+CGG 0.471327 8_3:-41388196 Msa1288450:CDS
AGGTGATGACTTCACACATA+AGG 0.478646 8_3:-41389031 Msa1288450:CDS
CAGTCTCGGGATCCATGTAA+TGG 0.479832 8_3:+41389228 None:intergenic
ACTGGTGAAGTTATTGATAG+AGG 0.485538 8_3:-41389446 Msa1288450:CDS
AACCTCTCAGGACACAATGC+AGG 0.487006 8_3:-41388541 Msa1288450:CDS
TGAAAAGAAGATTAATAAAG+TGG 0.488330 8_3:-41389207 Msa1288450:CDS
TCAGTAGCCGAGTCCTGATC+TGG 0.488597 8_3:+41389501 None:intergenic
TTCAGTAATCAAAGTGATGC+AGG 0.488748 8_3:-41387727 Msa1288450:three_prime_UTR
AGGTTCTTACAACAGGGTCT+TGG 0.488962 8_3:-41388467 Msa1288450:CDS
TTCATTGAGTGTTGTGATTG+TGG 0.489826 8_3:-41389305 Msa1288450:CDS
TTCAGCCCGAGTTCATGAAC+AGG 0.490428 8_3:+41389554 None:intergenic
GAGGCGTCTGAATGAGGAAA+TGG 0.490900 8_3:-41389261 Msa1288450:CDS
AAATTTGATTTAGAAAACTT+AGG 0.493550 8_3:+41394054 None:intergenic
CGGTCCTACGCTTACTGTCC+AGG 0.496060 8_3:-41388487 Msa1288450:CDS
AACTTCGTAAGGGTCTGAAA+GGG 0.499438 8_3:-41388791 Msa1288450:CDS
GGTGATGACTTCACACATAA+GGG 0.500163 8_3:-41389030 Msa1288450:CDS
CAGACTTAAAAGCAACCTTT+GGG 0.500900 8_3:-41388317 Msa1288450:CDS
TGATAGGTTGTACTCAGGAT+TGG 0.503047 8_3:-41389753 Msa1288450:CDS
AAGACTCCTGTTCATGAACT+CGG 0.516778 8_3:-41389560 Msa1288450:CDS
AGATTGAAGCGTTTAAGCAT+AGG 0.520162 8_3:-41393906 Msa1288450:CDS
TGACCTCTGTTGGATTTGCA+AGG 0.526865 8_3:+41387854 None:intergenic
AAACTTCGTAAGGGTCTGAA+AGG 0.527114 8_3:-41388792 Msa1288450:CDS
GGGAAGAAATGTCCTTAGAA+AGG 0.527346 8_3:-41388136 Msa1288450:CDS
ACAAATAGTGAAATGAACTC+TGG 0.529442 8_3:+41388822 None:intergenic
TAGGATAAAATTATTAATGG+TGG 0.529503 8_3:+41394073 None:intergenic
AGCTGAGAGGCGTCTGAATG+AGG 0.532045 8_3:-41389267 Msa1288450:CDS
TGTAGACATCTCTTAAGATC+CGG 0.532519 8_3:+41388177 None:intergenic
ATAAAATTATTAATGGTGGT+GGG 0.533754 8_3:+41394077 None:intergenic
GTGCAGATATTTCCACCGGC+AGG 0.534110 8_3:+41388418 None:intergenic
GAGTATTACGTGCAACCTGC+CGG 0.536343 8_3:-41388433 Msa1288450:CDS
CTGGTGAAGTTATTGATAGA+GGG 0.538344 8_3:-41389445 Msa1288450:CDS
CGAAATATGCAGATAAGACA+TGG 0.541743 8_3:-41393870 Msa1288450:CDS
ATTGTCGTGGCAAACTAACA+TGG 0.547488 8_3:-41388346 Msa1288450:CDS
TACAGACATGAAAACCTCTC+AGG 0.548291 8_3:-41388553 Msa1288450:CDS
GGACAGGAAGCCTCAGATTG+AGG 0.548487 8_3:-41387965 Msa1288450:CDS
ATGAACTCGGGCTGAATCTG+TGG 0.550756 8_3:-41389547 Msa1288450:CDS
GGATAGAGTTAGCCATTACA+TGG 0.551642 8_3:-41389240 Msa1288450:CDS
AAGTTTCGGTCTTATTACCT+TGG 0.552048 8_3:-41388387 Msa1288450:CDS
AAGACCCTGTTGTAAGAACC+TGG 0.553834 8_3:+41388469 None:intergenic
TTTGGTGATAGGTTGTACTC+AGG 0.562234 8_3:-41389758 Msa1288450:CDS
CTTAAAAGCAACCTTTGGGA+AGG 0.563218 8_3:-41388313 Msa1288450:CDS
TGTAAACTGATAGCCACATT+CGG 0.563890 8_3:+41388596 None:intergenic
GGTGGATTGGAGTGTGCGTG+TGG 0.564084 8_3:+41387556 None:intergenic
AAATCTATTGAAGCAGCTCA+AGG 0.568181 8_3:-41389695 Msa1288450:CDS
TGCTGATAAACTTAGCTACA+AGG 0.569495 8_3:-41388229 Msa1288450:CDS
AGACTCCTGTTCATGAACTC+GGG 0.571232 8_3:-41389559 Msa1288450:CDS
CATCTCTTAAGATCCGGAGC+AGG 0.571367 8_3:+41388183 None:intergenic
ACCTTGGCACACATACTGGC+AGG 0.571727 8_3:-41388371 Msa1288450:CDS
GTGAAATGAACTCTGGAGAA+CGG 0.575403 8_3:+41388829 None:intergenic
ACAGGAAACTCGGCAGCGAG+TGG 0.580836 8_3:-41387992 Msa1288450:CDS
AGCCACCCTGACTTAGGCGA+CGG 0.585562 8_3:-41388507 Msa1288450:CDS
TTAAAAGCAACCTTTGGGAA+GGG 0.586426 8_3:-41388312 Msa1288450:CDS
ACTATCGCCGCCTCAATCTG+AGG 0.586727 8_3:+41387955 None:intergenic
ATAAATATGAAGATTTGGGT+AGG 0.586773 8_3:-41389103 Msa1288450:CDS
TCCTGCCAGTATGTGTGCCA+AGG 0.587792 8_3:+41388370 None:intergenic
AACCTGAGAAACAGGAAACT+CGG 0.588217 8_3:-41388002 Msa1288450:CDS
ATACGACAAGATTATAAACC+TGG 0.588266 8_3:-41388922 Msa1288450:CDS
GGATGATGTAGAGGTTACTC+TGG 0.590036 8_3:-41388760 Msa1288450:CDS
CATAAGGACACACATTTGGT+AGG 0.591138 8_3:+41388263 None:intergenic
CAGTTTACATCAAAATTAGA+GGG 0.591739 8_3:-41388582 Msa1288450:CDS
CAAAGTGCAGATATTTCCAC+CGG 0.598009 8_3:+41388414 None:intergenic
ATTCCAACCAGATCAGGACT+CGG 0.601328 8_3:-41389508 Msa1288450:CDS
ATGCTTCTGACCCTTCCCAA+AGG 0.602178 8_3:+41388302 None:intergenic
CTTAACAATGAGACTTCTCT+CGG 0.603477 8_3:+41388626 None:intergenic
TCACCAACATCTTTACTCAT+CGG 0.604309 8_3:+41388111 None:intergenic
TAGAGATATACTGATGTACA+TGG 0.604770 8_3:-41389609 Msa1288450:CDS
ATTTATAATCATAACGCTAG+TGG 0.606333 8_3:-41393820 Msa1288450:CDS
AATTCTTGAGCATAAACAGA+TGG 0.606533 8_3:+41389383 None:intergenic
GTAGATGATAAACTTCGTAA+GGG 0.607058 8_3:-41388801 Msa1288450:CDS
CACGTAATACTCGACTGAGT+TGG 0.607158 8_3:+41388444 None:intergenic
CTGTCCAGGTTCTTACAACA+GGG 0.608852 8_3:-41388473 Msa1288450:CDS
ACCTCTCAGGACACAATGCA+GGG 0.612857 8_3:-41388540 Msa1288450:CDS
TAGGACCGTCGCCTAAGTCA+GGG 0.612941 8_3:+41388502 None:intergenic
GGAAACTCGGCAGCGAGTGG+AGG 0.615424 8_3:-41387989 Msa1288450:CDS
GTTAAGCTCAAGACCGAATG+TGG 0.616613 8_3:-41388609 Msa1288450:CDS
AAAGAAGATTAATAAAGTGG+TGG 0.620743 8_3:-41389204 Msa1288450:CDS
TAGCCGAGTCCTGATCTGGT+TGG 0.622232 8_3:+41389505 None:intergenic
AGATTGAGGCGGCGATAGTG+AGG 0.627417 8_3:-41387951 Msa1288450:CDS
GAAATGAACTCTGGAGAACG+GGG 0.628544 8_3:+41388831 None:intergenic
ATAAACAGCATCTGGCAAAG+AGG 0.630265 8_3:-41388680 Msa1288450:CDS
GTTCAGTAGTAAACTATACA+AGG 0.638422 8_3:-41388061 Msa1288450:CDS
CAGGAAGCCTCAGATTGAGG+CGG 0.640359 8_3:-41387962 Msa1288450:CDS
GGTCAACGAGGATGATGTAG+AGG 0.645668 8_3:-41388769 Msa1288450:CDS
GAGCCGATGAGTAAAGATGT+TGG 0.646356 8_3:-41388114 Msa1288450:CDS
ACTTCGTAAGGGTCTGAAAG+GGG 0.649523 8_3:-41388790 Msa1288450:CDS
TTGTCGTGGCAAACTAACAT+GGG 0.652331 8_3:-41388345 Msa1288450:CDS
GTGGATTGGAGTGTGCGTGT+GGG 0.655843 8_3:+41387557 None:intergenic
GCCCTGCATTGTGTCCTGAG+AGG 0.655976 8_3:+41388539 None:intergenic
GTGTTGTATCATAATGAACC+AGG 0.658843 8_3:-41387705 Msa1288450:three_prime_UTR
TTAGTACATAGTGAACGCAC+TGG 0.661997 8_3:-41389464 Msa1288450:CDS
TATTACGTGCAACCTGCCGG+TGG 0.663897 8_3:-41388430 Msa1288450:CDS
TTGTTCCGTCGTGTAACCGA+CGG 0.664584 8_3:-41389071 Msa1288450:CDS
TGTAGAGGTTACTCTGGACA+AGG 0.664682 8_3:-41388754 Msa1288450:CDS
ATCCAGTTGAGTTTGTGCAG+AGG 0.670411 8_3:-41388965 Msa1288450:CDS
GACCGTCGCCTAAGTCAGGG+TGG 0.696070 8_3:+41388505 None:intergenic
TTTCCTTGCAAATCCAACAG+AGG 0.698003 8_3:-41387857 Msa1288450:CDS
AGAACCTGGACAGTAAGCGT+AGG 0.706663 8_3:+41388483 None:intergenic
TCTATTGAAGCAGCTCAAGG+AGG 0.716304 8_3:-41389692 Msa1288450:CDS
GGGTCTGAAAGGGGTCAACG+AGG 0.729389 8_3:-41388781 Msa1288450:CDS
GTTAATGAAATATTCAAACG+AGG 0.733246 8_3:+41388860 None:intergenic
GATGAGTAAAGATGTTGGTG+AGG 0.734708 8_3:-41388109 Msa1288450:CDS
AAATGAACTCTGGAGAACGG+GGG 0.742959 8_3:+41388832 None:intergenic
ATACTGGCAGGAGATTGTCG+TGG 0.746214 8_3:-41388359 Msa1288450:CDS
AAAGACCGTCGGTTACACGA+CGG 0.749089 8_3:+41389066 None:intergenic
ATTATCTTAAGAAAGCTGAG+AGG 0.761790 8_3:-41389280 Msa1288450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTGTAATTTTAATTTTTTT+TGG - chr8_3:41388072-41388091 Msa1288450:CDS 10.0%
!!! GTGTAATTTTAATTTTTTTT+GGG - chr8_3:41388073-41388092 Msa1288450:CDS 10.0%
!!! ACAAATTTTAGTTAAAAATA+AGG + chr8_3:41391084-41391103 None:intergenic 10.0%
!! TTCTAAATTGTATATAAATA+TGG + chr8_3:41391489-41391508 None:intergenic 10.0%
!! ACTTAGGATAAAATTATTAA+TGG + chr8_3:41387690-41387709 None:intergenic 15.0%
!!! AAATTTGATTTAGAAAACTT+AGG + chr8_3:41387706-41387725 None:intergenic 15.0%
!! CAACAATTATTTCATTATTA+GGG + chr8_3:41387732-41387751 None:intergenic 15.0%
!! ACAACAATTATTTCATTATT+AGG + chr8_3:41387733-41387752 None:intergenic 15.0%
!! CATGAAAAAAATTCAAAAAA+AGG + chr8_3:41387998-41388017 None:intergenic 15.0%
!! TACAATAAATCAAACAAAAA+TGG + chr8_3:41388047-41388066 None:intergenic 15.0%
!!! TTTTGTTTGATTTATTGTAT+TGG - chr8_3:41388048-41388067 Msa1288450:CDS 15.0%
!! TAGAATATTTAGATAATGAT+AGG - chr8_3:41388761-41388780 Msa1288450:CDS 15.0%
!!! AATTTTTAGTATAAAAAGAG+TGG - chr8_3:41390522-41390541 Msa1288450:intron 15.0%
!!! AATTTTAGTTAAAAATAAGG+CGG + chr8_3:41391081-41391100 None:intergenic 15.0%
!! TTTAAATACAAAGAAGTTAA+TGG + chr8_3:41391319-41391338 None:intergenic 15.0%
!!! ATTTATATACAATTTAGAAC+AGG - chr8_3:41391490-41391509 Msa1288450:intron 15.0%
!! AAATATAACAAAAATGCTAA+TGG - chr8_3:41392343-41392362 Msa1288450:intron 15.0%
!! ATAAAATTATTAATGGTGGT+GGG + chr8_3:41387683-41387702 None:intergenic 20.0%
!! TAGGATAAAATTATTAATGG+TGG + chr8_3:41387687-41387706 None:intergenic 20.0%
!!! AAGTAATTTGTAGCATTTTT+TGG - chr8_3:41388158-41388177 Msa1288450:CDS 20.0%
!!! AGTAATTTGTAGCATTTTTT+GGG - chr8_3:41388159-41388178 Msa1288450:CDS 20.0%
!! ATTAAGCATACATTAATAAG+AGG + chr8_3:41388345-41388364 None:intergenic 20.0%
!!! TGTTTTTGTAAAGTTTCAAA+GGG - chr8_3:41389309-41389328 Msa1288450:CDS 20.0%
!!! AATATCTAGCTTTTAAGAAA+GGG + chr8_3:41389367-41389386 None:intergenic 20.0%
!!! TAATATCTAGCTTTTAAGAA+AGG + chr8_3:41389368-41389387 None:intergenic 20.0%
!! TTCTTAAAAGCTAGATATTA+AGG - chr8_3:41389368-41389387 Msa1288450:CDS 20.0%
!! TCTTAAAAGCTAGATATTAA+GGG - chr8_3:41389369-41389388 Msa1288450:CDS 20.0%
!! TTAATCTCTAATCTTCATAT+TGG + chr8_3:41389468-41389487 None:intergenic 20.0%
!! AAGCAAATCAAATTAAAAAG+AGG + chr8_3:41389856-41389875 None:intergenic 20.0%
!! GTCAAAATATACATCAATTT+AGG - chr8_3:41390547-41390566 Msa1288450:intron 20.0%
!!! TTTCATGAAATATAATGGAT+TGG + chr8_3:41390576-41390595 None:intergenic 20.0%
!! GTGAATTTCATGAAATATAA+TGG + chr8_3:41390581-41390600 None:intergenic 20.0%
!! GTAATTATAAAAAATGACAC+AGG + chr8_3:41391053-41391072 None:intergenic 20.0%
!! AGTTGTTCTATTACAATTAT+TGG - chr8_3:41391174-41391193 Msa1288450:intron 20.0%
!! ATTTATTATCTTCACTTTAG+CGG - chr8_3:41391232-41391251 Msa1288450:intron 20.0%
!!! ACATGGTTTTATTGAATATT+AGG - chr8_3:41391616-41391635 Msa1288450:intron 20.0%
!! ATAGATTTGTAAACTTTACT+TGG - chr8_3:41391724-41391743 Msa1288450:intron 20.0%
!! TAGATTTGTAAACTTTACTT+GGG - chr8_3:41391725-41391744 Msa1288450:intron 20.0%
!!! TTTATTATGAAGTTTCCTTT+TGG - chr8_3:41391850-41391869 Msa1288450:intron 20.0%
!! TGAAAAGAAGATTAATAAAG+TGG - chr8_3:41392550-41392569 Msa1288450:intron 20.0%
!! TGATGATAAATATGAAGATT+TGG - chr8_3:41392649-41392668 Msa1288450:intron 20.0%
!! GATGATAAATATGAAGATTT+GGG - chr8_3:41392650-41392669 Msa1288450:intron 20.0%
!! AAACTATACAAGGTTAAAAT+AGG - chr8_3:41393706-41393725 Msa1288450:intron 20.0%
!! CAATATACATTGAAATCAAT+GGG + chr8_3:41394101-41394120 None:intergenic 20.0%
!! TCAATATACATTGAAATCAA+TGG + chr8_3:41394102-41394121 None:intergenic 20.0%
! GATAAAATTATTAATGGTGG+TGG + chr8_3:41387684-41387703 None:intergenic 25.0%
! ATTTATAATCATAACGCTAG+TGG - chr8_3:41387937-41387956 Msa1288450:CDS 25.0%
!!! TTTTTTTGGGTAAGATTTAG+AGG - chr8_3:41388086-41388105 Msa1288450:CDS 25.0%
!! ATTGAACTGGTTTATTTATG+TGG - chr8_3:41388213-41388232 Msa1288450:CDS 25.0%
! TAATCATCTATAATTCGTTG+TGG - chr8_3:41388361-41388380 Msa1288450:CDS 25.0%
!!! GTTGATTTGAAATGTTAAGA+AGG - chr8_3:41388568-41388587 Msa1288450:CDS 25.0%
! ATAGGTTACTTGTGATTATA+AGG - chr8_3:41388779-41388798 Msa1288450:CDS 25.0%
! TAGGTTACTTGTGATTATAA+GGG - chr8_3:41388780-41388799 Msa1288450:CDS 25.0%
! AGCATGTAACATACTTAATA+GGG - chr8_3:41388954-41388973 Msa1288450:CDS 25.0%
! TCTGTATTGAATAGTAGTAA+AGG + chr8_3:41389026-41389045 None:intergenic 25.0%
!!! GTGTTTTTGTAAAGTTTCAA+AGG - chr8_3:41389308-41389327 Msa1288450:CDS 25.0%
!! GTTTTTGTAAAGTTTCAAAG+GGG - chr8_3:41389310-41389329 Msa1288450:CDS 25.0%
!! TTTTTGTAAAGTTTCAAAGG+GGG - chr8_3:41389311-41389330 Msa1288450:CDS 25.0%
! GTCATACATAACTTCAAAAA+GGG + chr8_3:41389824-41389843 None:intergenic 25.0%
! TGTCATACATAACTTCAAAA+AGG + chr8_3:41389825-41389844 None:intergenic 25.0%
!!! AGAGTGTTTTTGTAATGTTA+AGG - chr8_3:41389948-41389967 Msa1288450:intron 25.0%
! GTTTATTGGAAATAGAACAT+AGG + chr8_3:41390139-41390158 None:intergenic 25.0%
! CTAATTTCAACTAAAACTCA+TGG + chr8_3:41390201-41390220 None:intergenic 25.0%
!!! CTTTTTTATTACAGAAGGAT+CGG + chr8_3:41390490-41390509 None:intergenic 25.0%
!!! TACTCCTTTTTTATTACAGA+AGG + chr8_3:41390495-41390514 None:intergenic 25.0%
! ACTATAGTAGTAGTCAATAT+TGG - chr8_3:41390599-41390618 Msa1288450:intron 25.0%
! CTTCATATGATTTCATTTAG+AGG - chr8_3:41390931-41390950 Msa1288450:intron 25.0%
!!! AGTTTTATATACCTTCATTC+CGG - chr8_3:41391146-41391165 Msa1288450:intron 25.0%
! TTCTATTACAATTATTGGTC+AGG - chr8_3:41391179-41391198 Msa1288450:intron 25.0%
!!! GTTGCACTTTTTAATTTTAG+AGG - chr8_3:41391690-41391709 Msa1288450:intron 25.0%
! TTGAATTAACGAATTGTTTC+TGG - chr8_3:41391814-41391833 Msa1288450:intron 25.0%
! ATTCAGAAATGCATACAATA+TGG - chr8_3:41391965-41391984 Msa1288450:intron 25.0%
!!! ACAAAAATGCTAATGGATTT+AGG - chr8_3:41392350-41392369 Msa1288450:intron 25.0%
!! ATTAATCTTCTTTTCAGTCT+CGG + chr8_3:41392546-41392565 None:intergenic 25.0%
! AAAGAAGATTAATAAAGTGG+TGG - chr8_3:41392553-41392572 Msa1288450:intron 25.0%
! ATAAATATGAAGATTTGGGT+AGG - chr8_3:41392654-41392673 Msa1288450:intron 25.0%
! GTTAATGAAATATTCAAACG+AGG + chr8_3:41392900-41392919 None:intergenic 25.0%
! TCAGTTTACATCAAAATTAG+AGG - chr8_3:41393174-41393193 Msa1288450:intron 25.0%
! CAGTTTACATCAAAATTAGA+GGG - chr8_3:41393175-41393194 Msa1288450:intron 25.0%
! ATAACGACAGAAAAATGTAT+CGG - chr8_3:41393974-41393993 Msa1288450:five_prime_UTR 25.0%
!! TTTTTGAGAAGATGATGATG+AGG + chr8_3:41387654-41387673 None:intergenic 30.0%
TCTGAAAATTCTTCTTCTTC+TGG + chr8_3:41387834-41387853 None:intergenic 30.0%
CATGTCTTATCTGCATATTT+CGG + chr8_3:41387889-41387908 None:intergenic 30.0%
!! TTAGCTTTGAAGAACTTTAC+AGG - chr8_3:41387962-41387981 Msa1288450:CDS 30.0%
TTTGAAGAACTTTACAGGTT+CGG - chr8_3:41387967-41387986 Msa1288450:CDS 30.0%
AACAAAAATGGATCAAAGCA+AGG + chr8_3:41388035-41388054 None:intergenic 30.0%
!! GTTATAGGATTTGAGGTTTT+TGG - chr8_3:41388114-41388133 Msa1288450:CDS 30.0%
!! TGTTTAGTTTGTGATTGAAC+TGG - chr8_3:41388200-41388219 Msa1288450:CDS 30.0%
!! AATTCGTCTTTTTCATCACA+CGG + chr8_3:41388252-41388271 None:intergenic 30.0%
TACGAAACGAAATGCATTAA+TGG + chr8_3:41388316-41388335 None:intergenic 30.0%
ATGACAATATTAGAGAGTTG+AGG - chr8_3:41388429-41388448 Msa1288450:CDS 30.0%
CATGTAGAGAGATTAAATGA+AGG - chr8_3:41388502-41388521 Msa1288450:CDS 30.0%
AGTGTGGAAAGTTCATAATT+TGG - chr8_3:41388854-41388873 Msa1288450:CDS 30.0%
TGGAAAGTTCATAATTTGGA+GGG - chr8_3:41388858-41388877 Msa1288450:CDS 30.0%
!!! ACTCTTTTTTTCACGGTTAA+TGG + chr8_3:41388891-41388910 None:intergenic 30.0%
ATTAACCGTGAAAAAAAGAG+TGG - chr8_3:41388890-41388909 Msa1288450:CDS 30.0%
TTAACCGTGAAAAAAAGAGT+GGG - chr8_3:41388891-41388910 Msa1288450:CDS 30.0%
CAGCATGTAACATACTTAAT+AGG - chr8_3:41388953-41388972 Msa1288450:CDS 30.0%
GGCTTAGAAAAATACAATCA+TGG + chr8_3:41388997-41389016 None:intergenic 30.0%
! GATTGTATTTTTCTAAGCCA+AGG - chr8_3:41388998-41389017 Msa1288450:CDS 30.0%
! TTTTCCGAAGTTCTATCAAT+TGG - chr8_3:41389063-41389082 Msa1288450:CDS 30.0%
TGAACCAATTGATAGAACTT+CGG + chr8_3:41389070-41389089 None:intergenic 30.0%
CTCTAATCTTCATATTGGTA+GGG + chr8_3:41389463-41389482 None:intergenic 30.0%
TCTCTAATCTTCATATTGGT+AGG + chr8_3:41389464-41389483 None:intergenic 30.0%
AGATTAGAGATTAAGAACAC+AGG - chr8_3:41389474-41389493 Msa1288450:CDS 30.0%
TAACATTGTTTGAACTCCTT+TGG - chr8_3:41389514-41389533 Msa1288450:CDS 30.0%
ACTTCTGTTTGTTTACGTAT+TGG + chr8_3:41389636-41389655 None:intergenic 30.0%
AATACGTAAACAAACAGAAG+TGG - chr8_3:41389635-41389654 Msa1288450:CDS 30.0%
AACAAACAGAAGTGGTTAAT+AGG - chr8_3:41389643-41389662 Msa1288450:CDS 30.0%
TTAATGCTCAAGTACATATG+AGG - chr8_3:41389891-41389910 Msa1288450:intron 30.0%
! ATTATTGATTGTTGCTTGTG+TGG + chr8_3:41389974-41389993 None:intergenic 30.0%
AGCAACAATCAATAATCCAA+AGG - chr8_3:41389978-41389997 Msa1288450:intron 30.0%
!! CCATCTTTTGATTAATCCTT+TGG + chr8_3:41389997-41390016 None:intergenic 30.0%
CCAAAGGATTAATCAAAAGA+TGG - chr8_3:41389994-41390013 Msa1288450:intron 30.0%
TTGGAAATAGAACATAGGAA+AGG + chr8_3:41390134-41390153 None:intergenic 30.0%
!! TTGGATATCTTCTAGCTTAT+GGG + chr8_3:41390341-41390360 None:intergenic 30.0%
!! TTTGGATATCTTCTAGCTTA+TGG + chr8_3:41390342-41390361 None:intergenic 30.0%
CGATCCTTCTGTAATAAAAA+AGG - chr8_3:41390488-41390507 Msa1288450:intron 30.0%
! AAACAGTGAAAAGTGACTTT+TGG + chr8_3:41390964-41390983 None:intergenic 30.0%
! CACTGTTTCACTATTTTACT+TGG - chr8_3:41390976-41390995 Msa1288450:intron 30.0%
GTTCCTTTCTATATTATGCT+TGG - chr8_3:41391104-41391123 Msa1288450:intron 30.0%
CTACCAAGCATAATATAGAA+AGG + chr8_3:41391110-41391129 None:intergenic 30.0%
GAGAGATAATAAAGGAAACT+TGG + chr8_3:41391774-41391793 None:intergenic 30.0%
CAATCAAGGAGAGATAATAA+AGG + chr8_3:41391782-41391801 None:intergenic 30.0%
TCGTTAATTCAAGTAAAAGC+AGG + chr8_3:41391806-41391825 None:intergenic 30.0%
TCCACATATAAACAGAAAGA+GGG + chr8_3:41391946-41391965 None:intergenic 30.0%
ATCCACATATAAACAGAAAG+AGG + chr8_3:41391947-41391966 None:intergenic 30.0%
AATATGGTGCTTCACAAATT+TGG - chr8_3:41391981-41392000 Msa1288450:intron 30.0%
TAGAGATATACTGATGTACA+TGG - chr8_3:41392148-41392167 Msa1288450:intron 30.0%
AATTCTTGAGCATAAACAGA+TGG + chr8_3:41392377-41392396 None:intergenic 30.0%
ACAACACTCAATGAATCTTT+GGG + chr8_3:41392447-41392466 None:intergenic 30.0%
ATTATCTTAAGAAAGCTGAG+AGG - chr8_3:41392477-41392496 Msa1288450:intron 30.0%
! TTAATCTTCTTTTCAGTCTC+GGG + chr8_3:41392545-41392564 None:intergenic 30.0%
TTAATCCATATGGAGAATTC+TGG - chr8_3:41392608-41392627 Msa1288450:intron 30.0%
ATACGACAAGATTATAAACC+TGG - chr8_3:41392835-41392854 Msa1288450:intron 30.0%
ACAAATAGTGAAATGAACTC+TGG + chr8_3:41392938-41392957 None:intergenic 30.0%
TGTAGATGATAAACTTCGTA+AGG - chr8_3:41392955-41392974 Msa1288450:intron 30.0%
GTAGATGATAAACTTCGTAA+GGG - chr8_3:41392956-41392975 Msa1288450:intron 30.0%
! CATCTTTTTCTTGCAAGTAT+CGG + chr8_3:41393042-41393061 None:intergenic 30.0%
! GAAGTATTATAAACAGCATC+TGG - chr8_3:41393069-41393088 Msa1288450:intron 30.0%
! CAGCATTATTGAAAAGCATA+AGG + chr8_3:41393513-41393532 None:intergenic 30.0%
TAAGAGATGTCTACAATCAT+TGG - chr8_3:41393588-41393607 Msa1288450:intron 30.0%
!! ACAATCATTGGCTTTAGTTA+AGG - chr8_3:41393600-41393619 Msa1288450:intron 30.0%
!! CAATCATTGGCTTTAGTTAA+GGG - chr8_3:41393601-41393620 Msa1288450:intron 30.0%
GTTCAGTAGTAAACTATACA+AGG - chr8_3:41393696-41393715 Msa1288450:intron 30.0%
! TTAAAAGGCAAATTTTCACC+TGG + chr8_3:41394073-41394092 None:intergenic 30.0%
AATCAATGGGTCTACTTAAA+AGG + chr8_3:41394088-41394107 None:intergenic 30.0%
AAAACATCGCAACAACAAAT+AGG + chr8_3:41394133-41394152 None:intergenic 30.0%
CAAAAAGACATCAGTATGTT+TGG + chr8_3:41394175-41394194 None:intergenic 30.0%
! AATCTCTCATCGATCGATTT+AGG - chr8_3:41387789-41387808 Msa1288450:CDS 35.0%
! ATCTCTCATCGATCGATTTA+GGG - chr8_3:41387790-41387809 Msa1288450:CDS 35.0%
! AGATTGAAGCGTTTAAGCAT+AGG - chr8_3:41387851-41387870 Msa1288450:CDS 35.0%
! GATTGAAGCGTTTAAGCATA+GGG - chr8_3:41387852-41387871 Msa1288450:CDS 35.0%
GTTTAAGCATAGGGTTGTTA+TGG - chr8_3:41387861-41387880 Msa1288450:CDS 35.0%
CGAAATATGCAGATAAGACA+TGG - chr8_3:41387887-41387906 Msa1288450:CDS 35.0%
! GATTTAGAGGTGATGGTTAT+AGG - chr8_3:41388099-41388118 Msa1288450:CDS 35.0%
!! AGGATTTGAGGTTTTTGGAT+TGG - chr8_3:41388119-41388138 Msa1288450:CDS 35.0%
TAGAAACTGTCGTGGAAAAT+AGG - chr8_3:41388464-41388483 Msa1288450:CDS 35.0%
AAGGATAGTCAACTCATTAG+AGG - chr8_3:41388521-41388540 Msa1288450:CDS 35.0%
! TAACGAGTTGGATCGAAATA+TGG - chr8_3:41388601-41388620 Msa1288450:CDS 35.0%
GCTTAGCTTAAATTCTTTGC+AGG - chr8_3:41388714-41388733 Msa1288450:CDS 35.0%
!!! TTTTTTGACGAGCAACATCA+GGG + chr8_3:41388806-41388825 None:intergenic 35.0%
!!! TTTTTTTGACGAGCAACATC+AGG + chr8_3:41388807-41388826 None:intergenic 35.0%
GATGTTGCTCGTCAAAAAAA+CGG - chr8_3:41388807-41388826 Msa1288450:CDS 35.0%
ATGTTGCTCGTCAAAAAAAC+GGG - chr8_3:41388808-41388827 Msa1288450:CDS 35.0%
GTGGAAAGTTCATAATTTGG+AGG - chr8_3:41388857-41388876 Msa1288450:CDS 35.0%
!!! TCTACCCACTCTTTTTTTCA+CGG + chr8_3:41388898-41388917 None:intergenic 35.0%
AAGAGTGGGTAGAGAAAATT+TGG - chr8_3:41388905-41388924 Msa1288450:CDS 35.0%
!! GAGAAAATTTGGAAGTGCTA+AGG - chr8_3:41388916-41388935 Msa1288450:CDS 35.0%
TCAAACCTTCCAAATACTGT+TGG - chr8_3:41389087-41389106 Msa1288450:CDS 35.0%
CAAACCTTCCAAATACTGTT+GGG - chr8_3:41389088-41389107 Msa1288450:CDS 35.0%
TTTGAACACCCAACAGTATT+TGG + chr8_3:41389099-41389118 None:intergenic 35.0%
TCAACTCTGTTTGTCATCTT+TGG + chr8_3:41389128-41389147 None:intergenic 35.0%
! GACAAACAGAGTTGATTCAT+TGG - chr8_3:41389133-41389152 Msa1288450:CDS 35.0%
TGACAAAATCCTCCAAGAAA+GGG + chr8_3:41389169-41389188 None:intergenic 35.0%
TTGACAAAATCCTCCAAGAA+AGG + chr8_3:41389170-41389189 None:intergenic 35.0%
!! TAAGAAGCTTGCTATACTAC+AGG - chr8_3:41389256-41389275 Msa1288450:CDS 35.0%
TGGAACATTTAAGTGTGACT+TGG + chr8_3:41389402-41389421 None:intergenic 35.0%
TTAAATGTTCCATCTCGATG+TGG - chr8_3:41389410-41389429 Msa1288450:CDS 35.0%
CTTCATATTGGTAGGGATTT+GGG + chr8_3:41389456-41389475 None:intergenic 35.0%
TCTTCATATTGGTAGGGATT+TGG + chr8_3:41389457-41389476 None:intergenic 35.0%
TTAAGAACACAGGTTCCATA+TGG - chr8_3:41389484-41389503 Msa1288450:CDS 35.0%
GGAGTTCAAACAATGTTAGA+AGG + chr8_3:41389512-41389531 None:intergenic 35.0%
! TTTGAACTCCTTTGGAAGAA+AGG - chr8_3:41389522-41389541 Msa1288450:CDS 35.0%
AAACATGGGACTCATACAAT+TGG - chr8_3:41389550-41389569 Msa1288450:CDS 35.0%
! GCAGGAACTATTCAGATTTT+GGG - chr8_3:41389572-41389591 Msa1288450:CDS 35.0%
! CAGGAACTATTCAGATTTTG+GGG - chr8_3:41389573-41389592 Msa1288450:CDS 35.0%
AGAAGTGGTTAATAGGTGTT+TGG - chr8_3:41389650-41389669 Msa1288450:CDS 35.0%
! TCATCCACATCATTCTAGAA+GGG + chr8_3:41389694-41389713 None:intergenic 35.0%
CTTATGTTGTTCTGTGATGA+AGG + chr8_3:41389720-41389739 None:intergenic 35.0%
AACATAAGAGTTGACATGAG+TGG - chr8_3:41389732-41389751 Msa1288450:CDS 35.0%
!! TTGACATGAGTGGTTGTTTT+GGG - chr8_3:41389742-41389761 Msa1288450:CDS 35.0%
!! TTCAAAAAGGGTGTTTCTCA+TGG + chr8_3:41389812-41389831 None:intergenic 35.0%
ATGTACTTGAGCATTAACGT+TGG + chr8_3:41389888-41389907 None:intergenic 35.0%
!!! GGTCCATTTTGATTTTTGAG+TGG - chr8_3:41390031-41390050 Msa1288450:intron 35.0%
CCACCACTCAAAAATCAAAA+TGG + chr8_3:41390037-41390056 None:intergenic 35.0%
!!! CCATTTTGATTTTTGAGTGG+TGG - chr8_3:41390034-41390053 Msa1288450:intron 35.0%
!! TTTTGAGTGGTGGAGAAATA+TGG - chr8_3:41390044-41390063 Msa1288450:intron 35.0%
GTGCTTCTTGAGAAGTTTAT+TGG + chr8_3:41390153-41390172 None:intergenic 35.0%
!! AACTTCTCAAGAAGCACTTA+TGG - chr8_3:41390156-41390175 Msa1288450:intron 35.0%
AAGCTAGAAGATATCCAAAC+TGG - chr8_3:41390343-41390362 Msa1288450:intron 35.0%
TCAGCATTTGACAATGTTCA+TGG - chr8_3:41390448-41390467 Msa1288450:intron 35.0%
CAGCATTTGACAATGTTCAT+GGG - chr8_3:41390449-41390468 Msa1288450:intron 35.0%
AGCATTTGACAATGTTCATG+GGG - chr8_3:41390450-41390469 Msa1288450:intron 35.0%
GAGATAACAAGAATGGTGAT+GGG + chr8_3:41390906-41390925 None:intergenic 35.0%
AGAGATAACAAGAATGGTGA+TGG + chr8_3:41390907-41390926 None:intergenic 35.0%
AGACAGAGAGATAACAAGAA+TGG + chr8_3:41390913-41390932 None:intergenic 35.0%
ACAGGTGATCAGGAAAATAA+AGG + chr8_3:41391035-41391054 None:intergenic 35.0%
AAAAAATGACACAGGTGATC+AGG + chr8_3:41391045-41391064 None:intergenic 35.0%
AGTTAAAAATAAGGCGGTGA+TGG + chr8_3:41391075-41391094 None:intergenic 35.0%
GTAATAGAACAACTGCTTAC+CGG + chr8_3:41391168-41391187 None:intergenic 35.0%
ATGGTGAATACAGAACAAAC+TGG + chr8_3:41391300-41391319 None:intergenic 35.0%
CTTTGCTCAAACATCTTAAG+TGG + chr8_3:41391411-41391430 None:intergenic 35.0%
AAATATGGCATTCTACTGAG+TGG + chr8_3:41391474-41391493 None:intergenic 35.0%
! AGAGCTGATTCTATTTCCTT+TGG - chr8_3:41391520-41391539 Msa1288450:intron 35.0%
TCAGTATGTGTGACAAAACT+TGG - chr8_3:41391659-41391678 Msa1288450:intron 35.0%
AAGTAAAAGCAGGTCAATCA+AGG + chr8_3:41391796-41391815 None:intergenic 35.0%
!! ACGAATTGTTTCTGGCATAT+TGG - chr8_3:41391822-41391841 Msa1288450:intron 35.0%
! TCCTTTTGGACATTTACACA+CGG - chr8_3:41391864-41391883 Msa1288450:intron 35.0%
TCCCTCTTTCTGTTTATATG+TGG - chr8_3:41391942-41391961 Msa1288450:intron 35.0%
! TGCTTCACAAATTTGGTGAT+AGG - chr8_3:41391988-41392007 Msa1288450:intron 35.0%
AAATCTATTGAAGCAGCTCA+AGG - chr8_3:41392062-41392081 Msa1288450:intron 35.0%
! TTCATGAACAGGAGTCTTTT+TGG + chr8_3:41392195-41392214 None:intergenic 35.0%
TCATTTATTCCAACCAGATC+AGG - chr8_3:41392243-41392262 Msa1288450:intron 35.0%
ACTGGTGAAGTTATTGATAG+AGG - chr8_3:41392311-41392330 Msa1288450:intron 35.0%
CTGGTGAAGTTATTGATAGA+GGG - chr8_3:41392312-41392331 Msa1288450:intron 35.0%
!! AGTTTCAGCTGAGTTTTATC+AGG - chr8_3:41392415-41392434 Msa1288450:intron 35.0%
CACAACACTCAATGAATCTT+TGG + chr8_3:41392448-41392467 None:intergenic 35.0%
! TTCATTGAGTGTTGTGATTG+TGG - chr8_3:41392452-41392471 Msa1288450:intron 35.0%
CATGCTCAGATTAATCCATA+TGG - chr8_3:41392598-41392617 Msa1288450:intron 35.0%
CTAAACCAGAATTCTCCATA+TGG + chr8_3:41392616-41392635 None:intergenic 35.0%
! TCGTATTTTCAAAAGACCGT+CGG + chr8_3:41392705-41392724 None:intergenic 35.0%
TACTGATCCTGAAAGATTGA+AGG - chr8_3:41392769-41392788 Msa1288450:intron 35.0%
CTTAACAATGAGACTTCTCT+CGG + chr8_3:41393134-41393153 None:intergenic 35.0%
TGTAAACTGATAGCCACATT+CGG + chr8_3:41393164-41393183 None:intergenic 35.0%
!! AAGTTTCGGTCTTATTACCT+TGG - chr8_3:41393370-41393389 Msa1288450:intron 35.0%
CAGACTTAAAAGCAACCTTT+GGG - chr8_3:41393440-41393459 Msa1288450:intron 35.0%
! TTAAAAGCAACCTTTGGGAA+GGG - chr8_3:41393445-41393464 Msa1288450:intron 35.0%
AAAGCATAAGGACACACATT+TGG + chr8_3:41393501-41393520 None:intergenic 35.0%
TGCTGATAAACTTAGCTACA+AGG - chr8_3:41393528-41393547 Msa1288450:intron 35.0%
TGTAGACATCTCTTAAGATC+CGG + chr8_3:41393583-41393602 None:intergenic 35.0%
TCACCAACATCTTTACTCAT+CGG + chr8_3:41393649-41393668 None:intergenic 35.0%
TAGTGAGGATCATGAAATCT+AGG - chr8_3:41393821-41393840 Msa1288450:CDS 35.0%
TTCAGTAATCAAAGTGATGC+AGG - chr8_3:41394030-41394049 Msa1288450:five_prime_UTR 35.0%
GTGTTGTATCATAATGAACC+AGG - chr8_3:41394052-41394071 Msa1288450:five_prime_UTR 35.0%
GACTGTGTTTGCTTCAGATT+TGG + chr8_3:41387618-41387637 None:intergenic 40.0%
TGGGTAAGATTTAGAGGTGA+TGG - chr8_3:41388092-41388111 Msa1288450:CDS 40.0%
! GGTGATGGTTATAGGATTTG+AGG - chr8_3:41388107-41388126 Msa1288450:CDS 40.0%
ATTCGTTGTGGATGTTGTGT+TGG - chr8_3:41388373-41388392 Msa1288450:CDS 40.0%
ACCTATAGTAGAAACTGTCG+TGG - chr8_3:41388456-41388475 Msa1288450:CDS 40.0%
TCCACGACAGTTTCTACTAT+AGG + chr8_3:41388460-41388479 None:intergenic 40.0%
AAAATAGGCTTAGGTGGTCT+GGG - chr8_3:41388479-41388498 Msa1288450:CDS 40.0%
AAACCTTATCCCACTAAGTG+TGG + chr8_3:41388666-41388685 None:intergenic 40.0%
ACACTTAGTGGGATAAGGTT+TGG - chr8_3:41388665-41388684 Msa1288450:CDS 40.0%
TGTTGCTCGTCAAAAAAACG+GGG - chr8_3:41388809-41388828 Msa1288450:CDS 40.0%
ACTCTCTCAGATTCAACATC+AGG + chr8_3:41388837-41388856 None:intergenic 40.0%
ATGTTGAATCTGAGAGAGTG+TGG - chr8_3:41388838-41388857 Msa1288450:CDS 40.0%
TACATGCTGCAAGTAACTAG+CGG + chr8_3:41388942-41388961 None:intergenic 40.0%
GAATAGTAGTAAAGGAGCCT+TGG + chr8_3:41389018-41389037 None:intergenic 40.0%
AACACCCAACAGTATTTGGA+AGG + chr8_3:41389095-41389114 None:intergenic 40.0%
! GGATTTTGTCAAACTCTCGT+TGG - chr8_3:41389178-41389197 Msa1288450:CDS 40.0%
AGATGTAGAGACAGAGATGT+TGG - chr8_3:41389228-41389247 Msa1288450:CDS 40.0%
GATGTAGAGACAGAGATGTT+GGG - chr8_3:41389229-41389248 Msa1288450:CDS 40.0%
ATGTAGAGACAGAGATGTTG+GGG - chr8_3:41389230-41389249 Msa1288450:CDS 40.0%
TACTACAGGTTCATGTTCTC+AGG - chr8_3:41389270-41389289 Msa1288450:CDS 40.0%
ACTACAGGTTCATGTTCTCA+GGG - chr8_3:41389271-41389290 Msa1288450:CDS 40.0%
GTAGGGATTTGGGTATTATG+GGG + chr8_3:41389446-41389465 None:intergenic 40.0%
GGTAGGGATTTGGGTATTAT+GGG + chr8_3:41389447-41389466 None:intergenic 40.0%
TGGTAGGGATTTGGGTATTA+TGG + chr8_3:41389448-41389467 None:intergenic 40.0%
CAATGTTAGAAGGAGCCATA+TGG + chr8_3:41389502-41389521 None:intergenic 40.0%
! AACTCCTTTGGAAGAAAGGA+GGG - chr8_3:41389526-41389545 Msa1288450:CDS 40.0%
! GGCAGGAACTATTCAGATTT+TGG - chr8_3:41389571-41389590 Msa1288450:CDS 40.0%
AGTGGTTAATAGGTGTTTGG+AGG - chr8_3:41389653-41389672 Msa1288450:CDS 40.0%
!! TTTCCCCTTCTAGAATGATG+TGG - chr8_3:41389687-41389706 Msa1288450:CDS 40.0%
! CATCCACATCATTCTAGAAG+GGG + chr8_3:41389693-41389712 None:intergenic 40.0%
CTCATCCACATCATTCTAGA+AGG + chr8_3:41389695-41389714 None:intergenic 40.0%
! GTTGACATGAGTGGTTGTTT+TGG - chr8_3:41389741-41389760 Msa1288450:CDS 40.0%
ATGCTCAAGTACATATGAGG+AGG - chr8_3:41389894-41389913 Msa1288450:intron 40.0%
CAGATAAATGCTGGAGTTTG+AGG - chr8_3:41389921-41389940 Msa1288450:intron 40.0%
AAGATGGCTGAGAGTTACTA+TGG - chr8_3:41390010-41390029 Msa1288450:intron 40.0%
CGTTATATCAAGGTCCAGTT+TGG + chr8_3:41390360-41390379 None:intergenic 40.0%
AACTGGACCTTGATATAACG+AGG - chr8_3:41390360-41390379 Msa1288450:intron 40.0%
CTGTTTGCCTCGTTATATCA+AGG + chr8_3:41390370-41390389 None:intergenic 40.0%
AGTAGTAGTCAATATTGGCC+AGG - chr8_3:41390604-41390623 Msa1288450:intron 40.0%
GTCCTTACGTCCATGAATAA+TGG - chr8_3:41390712-41390731 Msa1288450:intron 40.0%
AGCCATTATTCATGGACGTA+AGG + chr8_3:41390717-41390736 None:intergenic 40.0%
GCTGCTATAGCCATTATTCA+TGG + chr8_3:41390725-41390744 None:intergenic 40.0%
GATCCTGAGCAAACTTATTC+TGG - chr8_3:41390746-41390765 Msa1288450:intron 40.0%
GGGTTTGACTGATGACAAAT+GGG + chr8_3:41390790-41390809 None:intergenic 40.0%
CTGTAAATATCAACAGCGAG+GGG + chr8_3:41390810-41390829 None:intergenic 40.0%
GCTGTAAATATCAACAGCGA+GGG + chr8_3:41390811-41390830 None:intergenic 40.0%
TGCTGTAAATATCAACAGCG+AGG + chr8_3:41390812-41390831 None:intergenic 40.0%
CAAGAAGATTGAAGGACGAA+AGG + chr8_3:41390881-41390900 None:intergenic 40.0%
! GAGGGGTAATAGATCGTTTT+GGG + chr8_3:41391269-41391288 None:intergenic 40.0%
! AGAGGGGTAATAGATCGTTT+TGG + chr8_3:41391270-41391289 None:intergenic 40.0%
AAACGATCTATTACCCCTCT+AGG - chr8_3:41391270-41391289 Msa1288450:intron 40.0%
AACAAACTGGTCAACCTAGA+GGG + chr8_3:41391287-41391306 None:intergenic 40.0%
! TTCCTTTGGTTTAAGCCAAG+TGG - chr8_3:41391534-41391553 Msa1288450:intron 40.0%
TTCCACTTGGCTTAAACCAA+AGG + chr8_3:41391539-41391558 None:intergenic 40.0%
TGTTTGAGCAGCATTGTAAC+TGG + chr8_3:41391599-41391618 None:intergenic 40.0%
GTTACAATGCTGCTCAAACA+TGG - chr8_3:41391599-41391618 Msa1288450:intron 40.0%
GTATGTGTGACAAAACTTGG+TGG - chr8_3:41391662-41391681 Msa1288450:intron 40.0%
TCCGTGTGTAAATGTCCAAA+AGG + chr8_3:41391868-41391887 None:intergenic 40.0%
! TTTTGGACATTTACACACGG+AGG - chr8_3:41391867-41391886 Msa1288450:intron 40.0%
! TTTGGTGATAGGTTGTACTC+AGG - chr8_3:41391999-41392018 Msa1288450:intron 40.0%
TGATAGGTTGTACTCAGGAT+TGG - chr8_3:41392004-41392023 Msa1288450:intron 40.0%
!! CTTTTCTGGAAGAACTGAAC+AGG - chr8_3:41392090-41392109 Msa1288450:intron 40.0%
TGGAAGAACTGAACAGGAAA+TGG - chr8_3:41392096-41392115 Msa1288450:intron 40.0%
AAGACTCCTGTTCATGAACT+CGG - chr8_3:41392197-41392216 Msa1288450:intron 40.0%
TTAGTACATAGTGAACGCAC+TGG - chr8_3:41392293-41392312 Msa1288450:intron 40.0%
GGATAGAGTTAGCCATTACA+TGG - chr8_3:41392517-41392536 Msa1288450:intron 40.0%
!! CGGTCTTTTGAAAATACGAG+AGG - chr8_3:41392706-41392725 Msa1288450:intron 40.0%
AGGTGATGACTTCACACATA+AGG - chr8_3:41392726-41392745 Msa1288450:intron 40.0%
GGTGATGACTTCACACATAA+GGG - chr8_3:41392727-41392746 Msa1288450:intron 40.0%
ACTTCACACATAAGGGAATC+TGG - chr8_3:41392734-41392753 Msa1288450:intron 40.0%
ACTGGATCCTTCAATCTTTC+AGG + chr8_3:41392779-41392798 None:intergenic 40.0%
ACTTGTCATTGTTGAATGCC+AGG + chr8_3:41392856-41392875 None:intergenic 40.0%
! ACGAGGAATTCAAAGCATTC+TGG + chr8_3:41392883-41392902 None:intergenic 40.0%
! TGAAATGAACTCTGGAGAAC+GGG + chr8_3:41392930-41392949 None:intergenic 40.0%
! GTGAAATGAACTCTGGAGAA+CGG + chr8_3:41392931-41392950 None:intergenic 40.0%
AAACTTCGTAAGGGTCTGAA+AGG - chr8_3:41392965-41392984 Msa1288450:intron 40.0%
AACTTCGTAAGGGTCTGAAA+GGG - chr8_3:41392966-41392985 Msa1288450:intron 40.0%
ATAAACAGCATCTGGCAAAG+AGG - chr8_3:41393077-41393096 Msa1288450:intron 40.0%
! GAGGCTTTTGTCTGGAAAAA+CGG - chr8_3:41393096-41393115 Msa1288450:intron 40.0%
TACAGACATGAAAACCTCTC+AGG - chr8_3:41393204-41393223 Msa1288450:intron 40.0%
CAAAGTGCAGATATTTCCAC+CGG + chr8_3:41393346-41393365 None:intergenic 40.0%
TATTACCTTGGCACACATAC+TGG - chr8_3:41393382-41393401 Msa1288450:intron 40.0%
ATTGTCGTGGCAAACTAACA+TGG - chr8_3:41393411-41393430 Msa1288450:intron 40.0%
TTGTCGTGGCAAACTAACAT+GGG - chr8_3:41393412-41393431 Msa1288450:intron 40.0%
GCAGACTTAAAAGCAACCTT+TGG - chr8_3:41393439-41393458 Msa1288450:intron 40.0%
! CTTAAAAGCAACCTTTGGGA+AGG - chr8_3:41393444-41393463 Msa1288450:intron 40.0%
CATAAGGACACACATTTGGT+AGG + chr8_3:41393497-41393516 None:intergenic 40.0%
GGGAAGAAATGTCCTTAGAA+AGG - chr8_3:41393621-41393640 Msa1288450:intron 40.0%
GATGAGTAAAGATGTTGGTG+AGG - chr8_3:41393648-41393667 Msa1288450:intron 40.0%
AGGAACTGTAGTTGCACAAA+AGG - chr8_3:41393726-41393745 Msa1288450:intron 40.0%
AACCTGAGAAACAGGAAACT+CGG - chr8_3:41393755-41393774 Msa1288450:intron 40.0%
TTTCCTTGCAAATCCAACAG+AGG - chr8_3:41393900-41393919 Msa1288450:CDS 40.0%
! TCTCATTGAGCGAGACTTTT+TGG - chr8_3:41393942-41393961 Msa1288450:exon 40.0%
TGGATGTTGTGTTGGATGTG+TGG - chr8_3:41388381-41388400 Msa1288450:CDS 45.0%
GGATGTGTGGTTAGACTAGA+TGG - chr8_3:41388394-41388413 Msa1288450:CDS 45.0%
CTGTCGTGGAAAATAGGCTT+AGG - chr8_3:41388470-41388489 Msa1288450:CDS 45.0%
TCGTGGAAAATAGGCTTAGG+TGG - chr8_3:41388473-41388492 Msa1288450:CDS 45.0%
GAAAATAGGCTTAGGTGGTC+TGG - chr8_3:41388478-41388497 Msa1288450:CDS 45.0%
GGATCTCGAGATTAACGAGT+TGG - chr8_3:41388589-41388608 Msa1288450:CDS 45.0%
CTTATCCCACTAAGTGTGGT+CGG + chr8_3:41388662-41388681 None:intergenic 45.0%
GTTGCTCGTCAAAAAAACGG+GGG - chr8_3:41388810-41388829 Msa1288450:CDS 45.0%
TTGCTCGTCAAAAAAACGGG+GGG - chr8_3:41388811-41388830 Msa1288450:CDS 45.0%
! GAACTCCTTTGGAAGAAAGG+AGG - chr8_3:41389525-41389544 Msa1288450:CDS 45.0%
! ACTCCTTTGGAAGAAAGGAG+GGG - chr8_3:41389527-41389546 Msa1288450:CDS 45.0%
TTTCCCCTCCTTTCTTCCAA+AGG + chr8_3:41389533-41389552 None:intergenic 45.0%
GAAGAAAGGAGGGGAAACAT+GGG - chr8_3:41389536-41389555 Msa1288450:CDS 45.0%
ATGGGACTCATACAATTGGC+AGG - chr8_3:41389554-41389573 Msa1288450:CDS 45.0%
!! GGAGGTGTTCAGATAAATGC+TGG - chr8_3:41389912-41389931 Msa1288450:intron 45.0%
! TAAATGCTGGAGTTTGAGGC+TGG - chr8_3:41389925-41389944 Msa1288450:intron 45.0%
AGTAGTCAATATTGGCCAGG+AGG - chr8_3:41390607-41390626 Msa1288450:intron 45.0%
TGGAGCATAGAGCTCAGTAA+GGG + chr8_3:41390638-41390657 None:intergenic 45.0%
TTGGAGCATAGAGCTCAGTA+AGG + chr8_3:41390639-41390658 None:intergenic 45.0%
CTATGCTCCAAGTGACTCTT+AGG - chr8_3:41390648-41390667 Msa1288450:intron 45.0%
ATGCTCTCCTAAGAGTCACT+TGG + chr8_3:41390658-41390677 None:intergenic 45.0%
!! AGGAGAGCATTTCAGCATTG+CGG - chr8_3:41390668-41390687 Msa1288450:intron 45.0%
GCATGGAGAACCACAAATGT+GGG - chr8_3:41390690-41390709 Msa1288450:intron 45.0%
GGGGTTTGACTGATGACAAA+TGG + chr8_3:41390791-41390810 None:intergenic 45.0%
AACTTGTGTGCACAACGCAA+AGG + chr8_3:41390857-41390876 None:intergenic 45.0%
GATGGGCACAAGAAGATTGA+AGG + chr8_3:41390889-41390908 None:intergenic 45.0%
ACAACTGCTTACCGGAATGA+AGG + chr8_3:41391160-41391179 None:intergenic 45.0%
ACAAACTGGTCAACCTAGAG+GGG + chr8_3:41391286-41391305 None:intergenic 45.0%
GAACAAACTGGTCAACCTAG+AGG + chr8_3:41391288-41391307 None:intergenic 45.0%
TCTATTGAAGCAGCTCAAGG+AGG - chr8_3:41392065-41392084 Msa1288450:intron 45.0%
! AGCTCAAGGAGGATCTTTTC+TGG - chr8_3:41392076-41392095 Msa1288450:intron 45.0%
!! ACAGGAGTCTTTTTGGCACT+TGG + chr8_3:41392188-41392207 None:intergenic 45.0%
AGACTCCTGTTCATGAACTC+GGG - chr8_3:41392198-41392217 Msa1288450:intron 45.0%
ATTCCAACCAGATCAGGACT+CGG - chr8_3:41392249-41392268 Msa1288450:intron 45.0%
ATCCAGTTGAGTTTGTGCAG+AGG - chr8_3:41392792-41392811 Msa1288450:intron 45.0%
! AAATGAACTCTGGAGAACGG+GGG + chr8_3:41392928-41392947 None:intergenic 45.0%
! GAAATGAACTCTGGAGAACG+GGG + chr8_3:41392929-41392948 None:intergenic 45.0%
ACTTCGTAAGGGTCTGAAAG+GGG - chr8_3:41392967-41392986 Msa1288450:intron 45.0%
GGATGATGTAGAGGTTACTC+TGG - chr8_3:41392997-41393016 Msa1288450:intron 45.0%
TGTAGAGGTTACTCTGGACA+AGG - chr8_3:41393003-41393022 Msa1288450:intron 45.0%
GTTAAGCTCAAGACCGAATG+TGG - chr8_3:41393148-41393167 Msa1288450:intron 45.0%
ACTGTCCAGGTTCTTACAAC+AGG - chr8_3:41393283-41393302 Msa1288450:intron 45.0%
CTGTCCAGGTTCTTACAACA+GGG - chr8_3:41393284-41393303 Msa1288450:intron 45.0%
AAGACCCTGTTGTAAGAACC+TGG + chr8_3:41393291-41393310 None:intergenic 45.0%
AGGTTCTTACAACAGGGTCT+TGG - chr8_3:41393290-41393309 Msa1288450:intron 45.0%
CACGTAATACTCGACTGAGT+TGG + chr8_3:41393316-41393335 None:intergenic 45.0%
CTGCACTTTGCGAGAAGTTT+CGG - chr8_3:41393356-41393375 Msa1288450:intron 45.0%
!! TACTCATCGGCTCCTTTCTA+AGG + chr8_3:41393636-41393655 None:intergenic 45.0%
GAGCCGATGAGTAAAGATGT+TGG - chr8_3:41393643-41393662 Msa1288450:intron 45.0%
GGAATCTGAACCTGAGAAAC+AGG - chr8_3:41393747-41393766 Msa1288450:intron 45.0%
TGACCTCTGTTGGATTTGCA+AGG + chr8_3:41393906-41393925 None:intergenic 45.0%
ATGCGTTTCTTGACCTCTGT+TGG + chr8_3:41393916-41393935 None:intergenic 45.0%
!! TTGAGCGAGACTTTTTGGAG+AGG - chr8_3:41393947-41393966 Msa1288450:exon 45.0%
!! TGAGCGAGACTTTTTGGAGA+GGG - chr8_3:41393948-41393967 Msa1288450:exon 45.0%
ACTAAGTGTGGTCGGCTACA+TGG + chr8_3:41388654-41388673 None:intergenic 50.0%
ATGTAGCCGACCACACTTAG+TGG - chr8_3:41388653-41388672 Msa1288450:CDS 50.0%
TGTAGCCGACCACACTTAGT+GGG - chr8_3:41388654-41388673 Msa1288450:CDS 50.0%
CGACCACACTTAGTGGGATA+AGG - chr8_3:41388660-41388679 Msa1288450:CDS 50.0%
GGAAGCTAAGCTCCCTTTCT+TGG - chr8_3:41389154-41389173 Msa1288450:CDS 50.0%
AGCTAAGCTCCCTTTCTTGG+AGG - chr8_3:41389157-41389176 Msa1288450:CDS 50.0%
ACAGGTTCATGTTCTCAGGG+AGG - chr8_3:41389274-41389293 Msa1288450:CDS 50.0%
GCTCAAGTTCCACATCGAGA+TGG + chr8_3:41389422-41389441 None:intergenic 50.0%
GGAAGAAAGGAGGGGAAACA+TGG - chr8_3:41389535-41389554 Msa1288450:CDS 50.0%
AGCATTTCAGCATTGCGGCA+TGG - chr8_3:41390673-41390692 Msa1288450:intron 50.0%
GGCATGGAGAACCACAAATG+TGG - chr8_3:41390689-41390708 Msa1288450:intron 50.0%
GACGTAAGGACCCACATTTG+TGG + chr8_3:41390703-41390722 None:intergenic 50.0%
! GCGCCAGAATAAGTTTGCTC+AGG + chr8_3:41390752-41390771 None:intergenic 50.0%
TTCAGCCCGAGTTCATGAAC+AGG + chr8_3:41392206-41392225 None:intergenic 50.0%
ATGAACTCGGGCTGAATCTG+TGG - chr8_3:41392210-41392229 Msa1288450:intron 50.0%
TCGGCTACTGAACACACTTC+TGG - chr8_3:41392268-41392287 Msa1288450:intron 50.0%
! GAGGCGTCTGAATGAGGAAA+TGG - chr8_3:41392496-41392515 Msa1288450:intron 50.0%
CAGTCTCGGGATCCATGTAA+TGG + chr8_3:41392532-41392551 None:intergenic 50.0%
TTGTTCCGTCGTGTAACCGA+CGG - chr8_3:41392686-41392705 Msa1288450:intron 50.0%
! AAAGACCGTCGGTTACACGA+CGG + chr8_3:41392694-41392713 None:intergenic 50.0%
AGCCTCTGCACAAACTCAAC+TGG + chr8_3:41392797-41392816 None:intergenic 50.0%
GGTCAACGAGGATGATGTAG+AGG - chr8_3:41392988-41393007 Msa1288450:intron 50.0%
! CTGGCAAAGAGGCTTTTGTC+TGG - chr8_3:41393088-41393107 Msa1288450:intron 50.0%
AACCTCTCAGGACACAATGC+AGG - chr8_3:41393216-41393235 Msa1288450:intron 50.0%
ACCTCTCAGGACACAATGCA+GGG - chr8_3:41393217-41393236 Msa1288450:intron 50.0%
AGAACCTGGACAGTAAGCGT+AGG + chr8_3:41393277-41393296 None:intergenic 50.0%
GAGTATTACGTGCAACCTGC+CGG - chr8_3:41393324-41393343 Msa1288450:intron 50.0%
ATACTGGCAGGAGATTGTCG+TGG - chr8_3:41393398-41393417 Msa1288450:intron 50.0%
ATGCTTCTGACCCTTCCCAA+AGG + chr8_3:41393458-41393477 None:intergenic 50.0%
AGCAACTGAGATTCCTGCTC+CGG - chr8_3:41393561-41393580 Msa1288450:intron 50.0%
CATCTCTTAAGATCCGGAGC+AGG + chr8_3:41393577-41393596 None:intergenic 50.0%
! TGCCGAGTTTCCTGTTTCTC+AGG + chr8_3:41393760-41393779 None:intergenic 50.0%
GGTTCATGTTCTCAGGGAGG+AGG - chr8_3:41389277-41389296 Msa1288450:CDS 55.0%
TAGCCGAGTCCTGATCTGGT+TGG + chr8_3:41392255-41392274 None:intergenic 55.0%
TCAGTAGCCGAGTCCTGATC+TGG + chr8_3:41392259-41392278 None:intergenic 55.0%
!! AGCTGAGAGGCGTCTGAATG+AGG - chr8_3:41392490-41392509 Msa1288450:intron 55.0%
TATGCCAGCCACCCTGACTT+AGG - chr8_3:41393244-41393263 Msa1288450:intron 55.0%
TAGGACCGTCGCCTAAGTCA+GGG + chr8_3:41393258-41393277 None:intergenic 55.0%
TATTACGTGCAACCTGCCGG+TGG - chr8_3:41393327-41393346 Msa1288450:intron 55.0%
GTGCAGATATTTCCACCGGC+AGG + chr8_3:41393342-41393361 None:intergenic 55.0%
ACCTTGGCACACATACTGGC+AGG - chr8_3:41393386-41393405 Msa1288450:intron 55.0%
TCCTGCCAGTATGTGTGCCA+AGG + chr8_3:41393390-41393409 None:intergenic 55.0%
GGACAGGAAGCCTCAGATTG+AGG - chr8_3:41393792-41393811 Msa1288450:intron 55.0%
CAGGAAGCCTCAGATTGAGG+CGG - chr8_3:41393795-41393814 Msa1288450:intron 55.0%
ACTATCGCCGCCTCAATCTG+AGG + chr8_3:41393805-41393824 None:intergenic 55.0%
AGATTGAGGCGGCGATAGTG+AGG - chr8_3:41393806-41393825 Msa1288450:CDS 55.0%
TCAGTAAGGGAGCAGCCTCC+TGG + chr8_3:41390625-41390644 None:intergenic 60.0%
GGGTCTGAAAGGGGTCAACG+AGG - chr8_3:41392976-41392995 Msa1288450:intron 60.0%
GCCCTGCATTGTGTCCTGAG+AGG + chr8_3:41393221-41393240 None:intergenic 60.0%
AGCCACCCTGACTTAGGCGA+CGG - chr8_3:41393250-41393269 Msa1288450:intron 60.0%
GTAGGACCGTCGCCTAAGTC+AGG + chr8_3:41393259-41393278 None:intergenic 60.0%
CGGTCCTACGCTTACTGTCC+AGG - chr8_3:41393270-41393289 Msa1288450:intron 60.0%
ACAGGAAACTCGGCAGCGAG+TGG - chr8_3:41393765-41393784 Msa1288450:intron 60.0%
GTCGCCTAAGTCAGGGTGGC+TGG + chr8_3:41393251-41393270 None:intergenic 65.0%
GACCGTCGCCTAAGTCAGGG+TGG + chr8_3:41393255-41393274 None:intergenic 65.0%
GGAAACTCGGCAGCGAGTGG+AGG - chr8_3:41393768-41393787 Msa1288450:intron 65.0%
AACTCGGCAGCGAGTGGAGG+AGG - chr8_3:41393771-41393790 Msa1288450:intron 65.0%
GGCAGCGAGTGGAGGAGGAC+AGG - chr8_3:41393776-41393795 Msa1288450:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 41387559 41394220 41387559 ID=Msa1288450;Name=Msa1288450
chr8_3 mRNA 41387559 41394220 41387559 ID=Msa1288450-mRNA-1;Parent=Msa1288450;Name=Msa1288450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=264|1|1|1|1|1|2|212|732
chr8_3 exon 41387559 41389808 41387559 ID=Msa1288450-mRNA-1:exon:11359;Parent=Msa1288450-mRNA-1
chr8_3 exon 41393796 41394220 41393796 ID=Msa1288450-mRNA-1:exon:11358;Parent=Msa1288450-mRNA-1
chr8_3 five_prime_UTR 41393957 41394220 41393957 ID=Msa1288450-mRNA-1:five_prime_utr;Parent=Msa1288450-mRNA-1
chr8_3 CDS 41393796 41393956 41393796 ID=Msa1288450-mRNA-1:cds;Parent=Msa1288450-mRNA-1
chr8_3 CDS 41387771 41389808 41387771 ID=Msa1288450-mRNA-1:cds;Parent=Msa1288450-mRNA-1
chr8_3 three_prime_UTR 41387559 41387770 41387559 ID=Msa1288450-mRNA-1:three_prime_utr;Parent=Msa1288450-mRNA-1
Gene Sequence

>Msa1288450

ATGAGTAACCAGAAGAAGAAGAATTTTCAGATTGAAGCGTTTAAGCATAGGGTTGTTATGGATCCGAAATATGCAGATAAGACATGGAAGATTCTTGAAGATGCTATTCATGAGATTTATAATCATAACGCTAGTGGTCTTAGCTTTGAAGAACTTTACAGAAATGCATACAATATGGTGCTTCACAAATTTGGTGATAGGTTGTACTCAGGATTGGTTGCGACTATGACTGCGCATCTCAAAGAAATAGCTAAATCTATTGAAGCAGCTCAAGGAGGATCTTTTCTGGAAGAACTGAACAGGAAATGGAATGATCATAACAAAGCATTGCAAATGATTAGAGATATACTGATGTACATGGACAGAACTTTCATTCCAAGTGCCAAAAAGACTCCTGTTCATGAACTCGGGCTGAATCTGTGGAAAGAAAATGTCATTTATTCCAACCAGATCAGGACTCGGCTACTGAACACACTTCTGGAATTAGTACATAGTGAACGCACTGGTGAAGTTATTGATAGAGGGATAATGAGAAATATAACAAAAATGCTAATGGATTTAGGTCCATCTGTTTATGCTCAAGAATTTGAGACTCATTTTCTTCAAGTTTCAGCTGAGTTTTATCAGGTAGAGTCCCAAAGATTCATTGAGTGTTGTGATTGTGGTGATTATCTTAAGAAAGCTGAGAGGCGTCTGAATGAGGAAATGGATAGAGTTAGCCATTACATGGATCCCGAGACTGAAAAGAAGATTAATAAAGTGGTGGAGACGCAGATGATTGAAAATCACATGCTCAGATTAATCCATATGGAGAATTCTGGTTTAGTCAACATGCTTTGTGATGATAAATATGAAGATTTGGGTAGGATGTATAACTTGTTCCGTCGTGTAACCGACGGTCTTTTGAAAATACGAGAGGTGATGACTTCACACATAAGGGAATCTGGTAAACAGCTTGTTACTGATCCTGAAAGATTGAAGGATCCAGTTGAGTTTGTGCAGAGGCTCTTAGATGAGAAAGACAAATACGACAAGATTATAAACCTGGCATTCAACAATGACAAGTCTTTCCAGAATGCTTTGAATTCCTCGTTTGAATATTTCATTAACTTGAACCCCCGTTCTCCAGAGTTCATTTCACTATTTGTAGATGATAAACTTCGTAAGGGTCTGAAAGGGGTCAACGAGGATGATGTAGAGGTTACTCTGGACAAGGTGATGATGCTGTTCCGATACTTGCAAGAAAAAGATGTTTTTGAGAAGTATTATAAACAGCATCTGGCAAAGAGGCTTTTGTCTGGAAAAACGGTTTCTGATGATGCCGAGAGAAGTCTCATTGTTAAGCTCAAGACCGAATGTGGCTATCAGTTTACATCAAAATTAGAGGGAATGTTTACAGACATGAAAACCTCTCAGGACACAATGCAGGGCTTTTATGCCAGCCACCCTGACTTAGGCGACGGTCCTACGCTTACTGTCCAGGTTCTTACAACAGGGTCTTGGCCAACTCAGTCGAGTATTACGTGCAACCTGCCGGTGGAAATATCTGCACTTTGCGAGAAGTTTCGGTCTTATTACCTTGGCACACATACTGGCAGGAGATTGTCGTGGCAAACTAACATGGGCTTTGCAGACTTAAAAGCAACCTTTGGGAAGGGTCAGAAGCATGAGTTAAACGTCTCTACCTACCAAATGTGTGTCCTTATGCTTTTCAATAATGCTGATAAACTTAGCTACAAGGAGATTGAGCAAGCAACTGAGATTCCTGCTCCGGATCTTAAGAGATGTCTACAATCATTGGCTTTAGTTAAGGGAAGAAATGTCCTTAGAAAGGAGCCGATGAGTAAAGATGTTGGTGAGGATGACGCTTTCTCTGTTAATGACAAGTTCAGTAGTAAACTATACAAGGTTAAAATAGGAACTGTAGTTGCACAAAAGGAATCTGAACCTGAGAAACAGGAAACTCGGCAGCGAGTGGAGGAGGACAGGAAGCCTCAGATTGAGGCGGCGATAGTGAGGATCATGAAATCTAGGAAGCAACTTGATCATAACAATCTTATAGCTGAAGTCACAAAGCAGTTGCAGTCACGTTTCCTTGCAAATCCAACAGAGGTCAAGAAACGCATTGAGTCTCTCATTGAGCGAGACTTTTTGGAGAGGGATGATAACGACAGAAAAATGTATCGGTATCTTGCATAG
Protein sequence

>Msa1288450

MSNQKKKNFQIEAFKHRVVMDPKYADKTWKILEDAIHEIYNHNASGLSFEELYRNAYNMVLHKFGDRLYSGLVATMTAHLKEIAKSIEAAQGGSFLEELNRKWNDHNKALQMIRDILMYMDRTFIPSAKKTPVHELGLNLWKENVIYSNQIRTRLLNTLLELVHSERTGEVIDRGIMRNITKMLMDLGPSVYAQEFETHFLQVSAEFYQVESQRFIECCDCGDYLKKAERRLNEEMDRVSHYMDPETEKKINKVVETQMIENHMLRLIHMENSGLVNMLCDDKYEDLGRMYNLFRRVTDGLLKIREVMTSHIRESGKQLVTDPERLKDPVEFVQRLLDEKDKYDKIINLAFNNDKSFQNALNSSFEYFINLNPRSPEFISLFVDDKLRKGLKGVNEDDVEVTLDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQGFYASHPDLGDGPTLTVQVLTTGSWPTQSSITCNLPVEISALCEKFRSYYLGTHTGRRLSWQTNMGFADLKATFGKGQKHELNVSTYQMCVLMLFNNADKLSYKEIEQATEIPAPDLKRCLQSLALVKGRNVLRKEPMSKDVGEDDAFSVNDKFSSKLYKVKIGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRKQLDHNNLIAEVTKQLQSRFLANPTEVKKRIESLIERDFLERDDNDRKMYRYLA*