Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248510 | XP_003623905.2 | 75.711 | 387 | 39 | 3 | 106 | 491 | 108 | 440 | 0.0 | 561 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248510 | G7L3K3 | 75.711 | 387 | 39 | 3 | 106 | 491 | 108 | 440 | 0.0 | 561 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1248490 | Msa1248510 | 0.914652 | 1.491344e-84 | -8.615850e-47 |
| Msa0536740 | Msa1248510 | 0.802189 | 6.312858e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248510 | MtrunA17_Chr7g0247241 | 75.711 | 387 | 39 | 3 | 106 | 491 | 108 | 440 | 0.0 | 561 |
| Msa1248510 | MtrunA17_Chr5g0411521 | 75.556 | 360 | 29 | 3 | 132 | 491 | 176 | 476 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248510 | AT3G53440.2 | 37.154 | 253 | 126 | 6 | 235 | 480 | 286 | 512 | 6.46e-31 | 125 |
| Msa1248510 | AT3G53440.1 | 37.154 | 253 | 126 | 6 | 235 | 480 | 286 | 512 | 6.46e-31 | 125 |
Find 127 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCAATCAATTAAGATTT+AGG | 0.116714 | 8_2:+42574793 | Msa1248510:CDS |
| TGAGATAGAGGTGGTGGTTT+TGG | 0.198282 | 8_2:-42571677 | None:intergenic |
| CAAAGCCTAGTCCACATTTC+TGG | 0.233776 | 8_2:+42572194 | Msa1248510:CDS |
| CCAGAGAAACGTGGTTATTA+TGG | 0.269822 | 8_2:-42571628 | None:intergenic |
| TGTCAATCAATTAAGATTTA+GGG | 0.297311 | 8_2:+42574794 | Msa1248510:CDS |
| TGTCACCCATGAAATTGATT+TGG | 0.304157 | 8_2:-42574962 | None:intergenic |
| CTGGAACAACGTTTCGAAAC+TGG | 0.311123 | 8_2:+42572213 | Msa1248510:CDS |
| TAATGATGATCCAGTTTGTT+AGG | 0.318541 | 8_2:+42571276 | Msa1248510:CDS |
| TTTGAGAATATTTGATTTGC+CGG | 0.323852 | 8_2:-42574445 | None:intergenic |
| TTCTGAGTAACGATGCTCTT+TGG | 0.337740 | 8_2:-42574468 | None:intergenic |
| AAGTCTCTTTCTAGATTTAG+TGG | 0.343248 | 8_2:+42574696 | Msa1248510:CDS |
| GCCGTATTACAATGGAAGTT+TGG | 0.343591 | 8_2:-42575216 | None:intergenic |
| GTCACCCATGAAATTGATTT+GGG | 0.348192 | 8_2:-42574961 | None:intergenic |
| ATCTCTCATTGCAAATTTGT+AGG | 0.355575 | 8_2:-42574650 | None:intergenic |
| AATACTCAATTCTTCATTCC+AGG | 0.357974 | 8_2:+42571743 | Msa1248510:CDS |
| GCAATCCCAAATCAATTTCA+TGG | 0.363066 | 8_2:+42574956 | Msa1248510:CDS |
| CAGAAAGAAGATTGAGATAG+AGG | 0.369005 | 8_2:-42571689 | None:intergenic |
| AAATATATGAGATTTCTTCA+TGG | 0.380804 | 8_2:-42571210 | None:intergenic |
| AAAGTTGATCAAAATCATAA+AGG | 0.382393 | 8_2:+42574522 | Msa1248510:CDS |
| CAAAATCTGTTGCAGGTACC+TGG | 0.382661 | 8_2:+42574267 | Msa1248510:intron |
| GAGATTGAAGGTGGAGAAGA+AGG | 0.384382 | 8_2:+42572016 | Msa1248510:CDS |
| GCTGCACAGAGTGCGGTTGC+CGG | 0.391786 | 8_2:+42573711 | Msa1248510:CDS |
| TCTAGATTTAGTGGCTCATC+AGG | 0.392797 | 8_2:+42574705 | Msa1248510:CDS |
| AAGTTGATCAAAATCATAAA+GGG | 0.398649 | 8_2:+42574523 | Msa1248510:CDS |
| ATAATACAAACCTAACAAAC+TGG | 0.402261 | 8_2:-42571286 | None:intergenic |
| TAATGCATTTAGATTAGATT+AGG | 0.403082 | 8_2:+42575258 | Msa1248510:three_prime_UTR |
| TAGGAACTTTCATATGTTGA+TGG | 0.414073 | 8_2:+42575384 | Msa1248510:three_prime_UTR |
| TCCAAACTTCCATTGTAATA+CGG | 0.414199 | 8_2:+42575215 | Msa1248510:three_prime_UTR |
| CCATAATAACCACGTTTCTC+TGG | 0.415989 | 8_2:+42571628 | Msa1248510:CDS |
| AATTAAGATTTAGGGACCTT+AGG | 0.417162 | 8_2:+42574802 | Msa1248510:CDS |
| TGTCATGCTCCTTCATGATT+AGG | 0.418792 | 8_2:+42575365 | Msa1248510:three_prime_UTR |
| TAAAAGTGCTAATAATATCT+TGG | 0.425250 | 8_2:+42571550 | Msa1248510:intron |
| TTCTTTACTTGCTTTAGCAC+AGG | 0.435819 | 8_2:-42574750 | None:intergenic |
| TCCAACAGTTCTACAGCAAC+CGG | 0.440923 | 8_2:-42573730 | None:intergenic |
| GAAGATTGAGATAGAGGTGG+TGG | 0.443156 | 8_2:-42571683 | None:intergenic |
| GTGGACTAAGGAACAAGAAT+TGG | 0.455229 | 8_2:+42572147 | Msa1248510:CDS |
| AAGGTGGAGAAGAAGGGAAA+AGG | 0.458473 | 8_2:+42572023 | Msa1248510:CDS |
| AATGCTACATCTACAAAACT+TGG | 0.459493 | 8_2:-42575149 | None:intergenic |
| GTTGGAACTCGAACTCGAAC+AGG | 0.464018 | 8_2:-42571714 | None:intergenic |
| GTGTGCCACATCGCAGCGGC+TGG | 0.467254 | 8_2:-42573646 | None:intergenic |
| GGAGCATGACACCCTCATCT+TGG | 0.472577 | 8_2:-42575353 | None:intergenic |
| AGTAAACTGCTCATACCTAC+TGG | 0.476955 | 8_2:+42574414 | Msa1248510:CDS |
| CTCAATGTCAGCCTCGATCA+AGG | 0.480704 | 8_2:+42574343 | Msa1248510:CDS |
| AAGCAACAAAAGGAAAATCA+AGG | 0.484594 | 8_2:+42574624 | Msa1248510:CDS |
| GCACGATGGTTGTGAAATAG+TGG | 0.487049 | 8_2:+42572048 | Msa1248510:CDS |
| GGGAAGAAGGAAGAGATTGA+AGG | 0.500449 | 8_2:+42572004 | Msa1248510:CDS |
| TAAAGCTGCAAAAGTTGCAT+TGG | 0.501844 | 8_2:+42574899 | Msa1248510:CDS |
| TAGAAGCTGCTCTTCTCCTA+AGG | 0.507172 | 8_2:-42574818 | None:intergenic |
| ATACAAAGTTTCAACTCAGA+AGG | 0.508154 | 8_2:+42571980 | Msa1248510:CDS |
| TTGTACTCCCAAGCAACAAA+AGG | 0.508228 | 8_2:+42574614 | Msa1248510:CDS |
| TTTACTTGCTTTAGCACAGG+TGG | 0.511523 | 8_2:-42574747 | None:intergenic |
| CAATCTTGTTTAGACTTCCC+AGG | 0.515115 | 8_2:-42574285 | None:intergenic |
| GATAAGGAAGGAATTGCAGC+AGG | 0.516244 | 8_2:+42572900 | Msa1248510:CDS |
| CGATGCTGCACACAATGATA+AGG | 0.522807 | 8_2:+42572884 | Msa1248510:CDS |
| GACGATGACATTGGAGTTGA+AGG | 0.523720 | 8_2:+42575008 | Msa1248510:CDS |
| AGGAAGAGAAAGCGCGGTGG+TGG | 0.525493 | 8_2:+42572109 | Msa1248510:CDS |
| TACAAAGTTTCAACTCAGAA+GGG | 0.527223 | 8_2:+42571981 | Msa1248510:CDS |
| CAGATATTGAGAATTGATGA+AGG | 0.530440 | 8_2:-42574389 | None:intergenic |
| GAAACGTTGTTCCAGAAATG+TGG | 0.531004 | 8_2:-42572205 | None:intergenic |
| GTGAAATAGTGGAAGAGTTG+AGG | 0.532067 | 8_2:+42572059 | Msa1248510:CDS |
| CTGGAGAAGGAAAAGGCATT+CGG | 0.532131 | 8_2:+42574862 | Msa1248510:CDS |
| AAGAAGGAAGAGATTGAAGG+TGG | 0.534159 | 8_2:+42572007 | Msa1248510:CDS |
| AATAGTGGAAGAGTTGAGGA+AGG | 0.535399 | 8_2:+42572063 | Msa1248510:CDS |
| AGATTGAAGGTGGAGAAGAA+GGG | 0.536092 | 8_2:+42572017 | Msa1248510:CDS |
| GAATTGAGTATTGACAAAGT+TGG | 0.537756 | 8_2:-42571732 | None:intergenic |
| CGGGCAAACAAATCTGTAGC+TGG | 0.538700 | 8_2:+42574843 | Msa1248510:CDS |
| ACAAAGTTTCAACTCAGAAG+GGG | 0.540390 | 8_2:+42571982 | Msa1248510:CDS |
| TTCTCATTGCCGTATTACAA+TGG | 0.543922 | 8_2:-42575224 | None:intergenic |
| GCTCATACCTACTGGAAAGA+AGG | 0.545149 | 8_2:+42574422 | Msa1248510:CDS |
| TCTGTAGCTGGAGAAGGAAA+AGG | 0.546804 | 8_2:+42574855 | Msa1248510:CDS |
| TAAAGATGGCATTGCAGCAA+GGG | 0.551569 | 8_2:+42573674 | Msa1248510:CDS |
| ATTAGCTCGAGAAGAGCCTA+TGG | 0.552268 | 8_2:-42575038 | None:intergenic |
| TTGTTCCAGAAATGTGGACT+AGG | 0.553064 | 8_2:-42572199 | None:intergenic |
| ATGAAAGTTCCTAATCATGA+AGG | 0.556304 | 8_2:-42575374 | None:intergenic |
| AACAAATCTGTAGCTGGAGA+AGG | 0.559128 | 8_2:+42574849 | Msa1248510:CDS |
| GAGAGTTGCACGATCTGTGA+AGG | 0.566309 | 8_2:-42571602 | None:intergenic |
| CAATCCCAAATCAATTTCAT+GGG | 0.567557 | 8_2:+42574957 | Msa1248510:CDS |
| GAGAAGAGCAGCTTCTACAC+GGG | 0.570089 | 8_2:+42574824 | Msa1248510:CDS |
| TGTGTGCAGCATCGCAGTGG+CGG | 0.573460 | 8_2:-42572875 | None:intergenic |
| ACAAGAATTGGCTCTGCGAA+CGG | 0.574620 | 8_2:+42572159 | Msa1248510:CDS |
| AAGTTGAATGTGGTGTGAAA+AGG | 0.575392 | 8_2:+42572089 | Msa1248510:CDS |
| AAAGAAGATTGAGATAGAGG+TGG | 0.577467 | 8_2:-42571686 | None:intergenic |
| ATTGCCTTTGCCCTTGATCG+AGG | 0.578198 | 8_2:-42574354 | None:intergenic |
| TAATTGTCTTGTATCCGTCT+AGG | 0.580348 | 8_2:+42575295 | Msa1248510:three_prime_UTR |
| GAGGACAATGACGATGACAT+TGG | 0.581558 | 8_2:+42574999 | Msa1248510:CDS |
| ATACCTACTGGAAAGAAGGC+CGG | 0.585107 | 8_2:+42574426 | Msa1248510:CDS |
| TTGCCGGCCTTCTTTCCAGT+AGG | 0.585999 | 8_2:-42574429 | None:intergenic |
| AGTTGCACAAGGGTGGACTA+AGG | 0.587210 | 8_2:+42572135 | Msa1248510:CDS |
| AAAATCTGTTGCAGGTACCT+GGG | 0.591061 | 8_2:+42574268 | Msa1248510:intron |
| GTGGCACACAATGATAAAGA+TGG | 0.592029 | 8_2:+42573660 | Msa1248510:CDS |
| GGAGTACAAAGTTCTTCACT+AGG | 0.595502 | 8_2:-42574600 | None:intergenic |
| GGAGAAGAGCAGCTTCTACA+CGG | 0.597341 | 8_2:+42574823 | Msa1248510:CDS |
| TCAATGTCAGCCTCGATCAA+GGG | 0.602031 | 8_2:+42574344 | Msa1248510:CDS |
| CAAAGTTTCAACTCAGAAGG+GGG | 0.603686 | 8_2:+42571983 | Msa1248510:CDS |
| ATGCTACATCTACAAAACTT+GGG | 0.608771 | 8_2:-42575148 | None:intergenic |
| ACAGTCCAGCCGCTGCGATG+TGG | 0.609578 | 8_2:+42573641 | Msa1248510:intron |
| CTTGATCGAGGCTGACATTG+AGG | 0.617140 | 8_2:-42574342 | None:intergenic |
| TCAGCCTCGATCAAGGGCAA+AGG | 0.617327 | 8_2:+42574350 | Msa1248510:CDS |
| AGTTGAAGGTGAAAGTCCAT+AGG | 0.620306 | 8_2:+42575022 | Msa1248510:CDS |
| AGATATTGAGAATTGATGAA+GGG | 0.632083 | 8_2:-42574388 | None:intergenic |
| GGTGGTGGTGAAGTTGCACA+AGG | 0.634091 | 8_2:+42572124 | Msa1248510:CDS |
| AGCAACAAAAGGAAAATCAA+GGG | 0.634134 | 8_2:+42574625 | Msa1248510:CDS |
| ATAAAGATGGCATTGCAGCA+AGG | 0.636214 | 8_2:+42573673 | Msa1248510:CDS |
| GCTGCACACAATGATAAGGA+AGG | 0.641647 | 8_2:+42572888 | Msa1248510:CDS |
| AGTTGATCAAAATCATAAAG+GGG | 0.648404 | 8_2:+42574524 | Msa1248510:CDS |
| CATTGTGTGCAGCATCGCAG+TGG | 0.649922 | 8_2:-42572878 | None:intergenic |
| TTTCAAGTAAAGTACCTAGA+CGG | 0.652767 | 8_2:-42575309 | None:intergenic |
| GTGGTGAAGTTGCACAAGGG+TGG | 0.656463 | 8_2:+42572128 | Msa1248510:CDS |
| GCTGACATTGAGGTGGTGTG+TGG | 0.659104 | 8_2:-42574332 | None:intergenic |
| GAGGTGGTGTGTGGAAGTCG+TGG | 0.661838 | 8_2:-42574323 | None:intergenic |
| GATATTGAGAATTGATGAAG+GGG | 0.662180 | 8_2:-42574387 | None:intergenic |
| TGGTAGAGCTGCACAGAGTG+CGG | 0.662970 | 8_2:+42573704 | Msa1248510:CDS |
| AGGAAGGAAGAAGTTGAATG+TGG | 0.671131 | 8_2:+42572079 | Msa1248510:CDS |
| ACTTGAAATATAGATCACGA+TGG | 0.677268 | 8_2:+42575324 | Msa1248510:three_prime_UTR |
| CATTGTGTGCCACATCGCAG+CGG | 0.677890 | 8_2:-42573650 | None:intergenic |
| ATAAGGAAGGAATTGCAGCA+GGG | 0.695488 | 8_2:+42572901 | Msa1248510:CDS |
| AAAGTTTCAACTCAGAAGGG+GGG | 0.695511 | 8_2:+42571984 | Msa1248510:CDS |
| GTGGTGGTGAAGTTGCACAA+GGG | 0.698386 | 8_2:+42572125 | Msa1248510:CDS |
| GTGAAAAGGAAGAGAAAGCG+CGG | 0.698757 | 8_2:+42572103 | Msa1248510:CDS |
| GATCGAGGCTGACATTGAGG+TGG | 0.699614 | 8_2:-42574339 | None:intergenic |
| GCTAAAGCAAGTAAAGAACA+AGG | 0.708807 | 8_2:+42574755 | Msa1248510:CDS |
| ATGAAAGAACCAGAGAAACG+TGG | 0.712836 | 8_2:-42571637 | None:intergenic |
| TGACAGTTGTAGTTCTGACG+AGG | 0.717971 | 8_2:+42574980 | Msa1248510:CDS |
| ATTGCAGCAAGGGCTTACAG+TGG | 0.725312 | 8_2:+42573684 | Msa1248510:CDS |
| AATTGCAGCAGGGCTTACAG+CGG | 0.735043 | 8_2:+42572911 | Msa1248510:CDS |
| GAAGGGAAAAGGAAGCACGA+TGG | 0.741513 | 8_2:+42572034 | Msa1248510:CDS |
| AAAAGGAAGAGAAAGCGCGG+TGG | 0.749477 | 8_2:+42572106 | Msa1248510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTCTTCTTATAATTT+AGG | + | chr8_2:42571441-42571460 | Msa1248510:intron | 10.0% |
| !!! | ATTTTTCATATTTTTGTTTT+AGG | + | chr8_2:42571812-42571831 | Msa1248510:intron | 10.0% |
| !!! | TTTTTCATATTTTTGTTTTA+GGG | + | chr8_2:42571813-42571832 | Msa1248510:intron | 10.0% |
| !! | AATATATAACATATTGTTTA+TGG | + | chr8_2:42573241-42573260 | Msa1248510:intron | 10.0% |
| !!! | ATTAAATTATAATTTGTTGA+TGG | + | chr8_2:42574183-42574202 | Msa1248510:intron | 10.0% |
| !!! | TTTTTTTGTCCTAAATTATA+AGG | - | chr8_2:42571412-42571431 | None:intergenic | 15.0% |
| !!! | ATAAAAGGAAAAAACTTTTT+AGG | + | chr8_2:42571493-42571512 | Msa1248510:intron | 15.0% |
| !!! | ACACTTATTTTAACAAAATG+CGG | - | chr8_2:42571320-42571339 | None:intergenic | 20.0% |
| !!! | CGTACCTTATTTTTTATAAT+TGG | + | chr8_2:42571378-42571397 | Msa1248510:intron | 20.0% |
| !! | AGGACCAATTATAAAAAATA+AGG | - | chr8_2:42571385-42571404 | None:intergenic | 20.0% |
| !! | TTTCTTCTTATAATTTAGGA+TGG | + | chr8_2:42571445-42571464 | Msa1248510:intron | 20.0% |
| !!! | TAAAAGTGCTAATAATATCT+TGG | + | chr8_2:42571550-42571569 | Msa1248510:intron | 20.0% |
| !!! | TTTGTAGTTTTAATCTGAAA+AGG | + | chr8_2:42571856-42571875 | Msa1248510:intron | 20.0% |
| !!! | TTGTAGTTTTAATCTGAAAA+GGG | + | chr8_2:42571857-42571876 | Msa1248510:intron | 20.0% |
| !! | TGAGAAACTATTAAGATTAA+TGG | + | chr8_2:42572386-42572405 | Msa1248510:intron | 20.0% |
| !! | GAGAAACTATTAAGATTAAT+GGG | + | chr8_2:42572387-42572406 | Msa1248510:intron | 20.0% |
| !! | GAAAAACAACTATAAAACAA+TGG | - | chr8_2:42572806-42572825 | None:intergenic | 20.0% |
| !!! | TATAGTTGTTTTTCAATGTT+AGG | + | chr8_2:42572812-42572831 | Msa1248510:intron | 20.0% |
| !! | AATTATAGTGTTTAATCCAA+TGG | + | chr8_2:42572979-42572998 | Msa1248510:intron | 20.0% |
| !! | ATTTCTCATATAGTATTTCT+AGG | - | chr8_2:42573179-42573198 | None:intergenic | 20.0% |
| !! | TATATTTAACAGTTACCTTT+AGG | - | chr8_2:42573877-42573896 | None:intergenic | 20.0% |
| !! | ATTTCATAAAGATGTATGAA+TGG | - | chr8_2:42574091-42574110 | None:intergenic | 20.0% |
| !!! | AATTACAATTTTCTTTGTGA+TGG | - | chr8_2:42574166-42574185 | None:intergenic | 20.0% |
| !!! | AAAGTTGATCAAAATCATAA+AGG | + | chr8_2:42574522-42574541 | Msa1248510:CDS | 20.0% |
| !!! | AAGTTGATCAAAATCATAAA+GGG | + | chr8_2:42574523-42574542 | Msa1248510:CDS | 20.0% |
| !! | TTAGTAGAAAAATCAATGTT+GGG | - | chr8_2:42574570-42574589 | None:intergenic | 20.0% |
| !! | ATTAGTAGAAAAATCAATGT+TGG | - | chr8_2:42574571-42574590 | None:intergenic | 20.0% |
| !! | ATGTCAATCAATTAAGATTT+AGG | + | chr8_2:42574793-42574812 | Msa1248510:CDS | 20.0% |
| !! | TGTCAATCAATTAAGATTTA+GGG | + | chr8_2:42574794-42574813 | Msa1248510:CDS | 20.0% |
| !! | TAATGCATTTAGATTAGATT+AGG | + | chr8_2:42575258-42575277 | Msa1248510:three_prime_UTR | 20.0% |
| ! | ATAATACAAACCTAACAAAC+TGG | - | chr8_2:42571289-42571308 | None:intergenic | 25.0% |
| !! | GTCCTTTTTCCTTATAATTT+AGG | + | chr8_2:42571400-42571419 | Msa1248510:intron | 25.0% |
| ! | GTCCTAAATTATAAGGAAAA+AGG | - | chr8_2:42571405-42571424 | None:intergenic | 25.0% |
| !! | TTCTTATAATTTAGGATGGA+AGG | + | chr8_2:42571449-42571468 | Msa1248510:intron | 25.0% |
| ! | ATTGAACTCATGGAAATAAA+AGG | + | chr8_2:42571478-42571497 | Msa1248510:intron | 25.0% |
| ! | TAATTGAGTGAAATTGACAA+AGG | - | chr8_2:42571785-42571804 | None:intergenic | 25.0% |
| !!! | TGTAGTTTTAATCTGAAAAG+GGG | + | chr8_2:42571858-42571877 | Msa1248510:intron | 25.0% |
| ! | TATCAATTGCAATAAAACTG+TGG | - | chr8_2:42571954-42571973 | None:intergenic | 25.0% |
| !! | AACTATTAAGATTAATGGGT+TGG | + | chr8_2:42572391-42572410 | Msa1248510:intron | 25.0% |
| ! | TGATATGTGACATCATATTA+TGG | + | chr8_2:42572423-42572442 | Msa1248510:intron | 25.0% |
| ! | AAACCTTATCACACTAAATA+TGG | - | chr8_2:42572472-42572491 | None:intergenic | 25.0% |
| ! | ATATTTAGTGTGATAAGGTT+TGG | + | chr8_2:42572471-42572490 | Msa1248510:intron | 25.0% |
| !! | TTCAGTAAGCTAAATTTGTT+CGG | + | chr8_2:42572520-42572539 | Msa1248510:intron | 25.0% |
| !! | ATTGTGAGATTTGAAATTTC+TGG | + | chr8_2:42572709-42572728 | Msa1248510:intron | 25.0% |
| !! | TTGTGAGATTTGAAATTTCT+GGG | + | chr8_2:42572710-42572729 | Msa1248510:intron | 25.0% |
| !!! | TAATCCAATGGTTTTATAGA+AGG | + | chr8_2:42572991-42573010 | Msa1248510:intron | 25.0% |
| ! | CTATGAAAAATATCTGTAGT+TGG | + | chr8_2:42573075-42573094 | Msa1248510:intron | 25.0% |
| ! | TATCAAACTCACTAATCAAT+AGG | - | chr8_2:42573214-42573233 | None:intergenic | 25.0% |
| !!! | TCAGTAAGCTAAACTTTTTT+TGG | + | chr8_2:42573340-42573359 | Msa1248510:intron | 25.0% |
| !!! | AAACTTTTTTTGGCATACTA+TGG | + | chr8_2:42573350-42573369 | Msa1248510:intron | 25.0% |
| ! | TCAAAAGAACAACAAAACAA+AGG | - | chr8_2:42573580-42573599 | None:intergenic | 25.0% |
| !! | TTGATCCAATGATTTTATAG+AGG | + | chr8_2:42573767-42573786 | Msa1248510:intron | 25.0% |
| ! | TAACAACAGCATATTAGAAA+CGG | - | chr8_2:42573828-42573847 | None:intergenic | 25.0% |
| ! | TCTTTGTGTTTATTTCCTAA+AGG | + | chr8_2:42573859-42573878 | Msa1248510:intron | 25.0% |
| !!! | ACAGAATCACTTTTACTTTT+CGG | + | chr8_2:42574112-42574131 | Msa1248510:intron | 25.0% |
| ! | AGATATTGAGAATTGATGAA+GGG | - | chr8_2:42574391-42574410 | None:intergenic | 25.0% |
| !!! | TTTGAGAATATTTGATTTGC+CGG | - | chr8_2:42574448-42574467 | None:intergenic | 25.0% |
| !!! | GATTTTGATCAACTTTAAGA+TGG | - | chr8_2:42574518-42574537 | None:intergenic | 25.0% |
| ! | AGTTGATCAAAATCATAAAG+GGG | + | chr8_2:42574524-42574543 | Msa1248510:CDS | 25.0% |
| !!! | CTTAGTCAAAATCTAGTTTT+CGG | + | chr8_2:42575121-42575140 | Msa1248510:three_prime_UTR | 25.0% |
| ! | TAATGATGATCCAGTTTGTT+AGG | + | chr8_2:42571276-42571295 | Msa1248510:CDS | 30.0% |
| !! | GTGGAAAATTGATTTTGTTG+AGG | - | chr8_2:42571578-42571597 | None:intergenic | 30.0% |
| !! | GAATTGAGTATTGACAAAGT+TGG | - | chr8_2:42571735-42571754 | None:intergenic | 30.0% |
| AATACTCAATTCTTCATTCC+AGG | + | chr8_2:42571743-42571762 | Msa1248510:CDS | 30.0% | |
| ATACAAAGTTTCAACTCAGA+AGG | + | chr8_2:42571980-42571999 | Msa1248510:CDS | 30.0% | |
| TACAAAGTTTCAACTCAGAA+GGG | + | chr8_2:42571981-42572000 | Msa1248510:CDS | 30.0% | |
| ! | ATCGAATTATGTTTCTAACG+AGG | + | chr8_2:42572327-42572346 | Msa1248510:intron | 30.0% |
| AAATTCGTCAAGTATCAACA+AGG | + | chr8_2:42572552-42572571 | Msa1248510:intron | 30.0% | |
| ! | CTACTAACTAGTTTAAACCT+AGG | - | chr8_2:42572612-42572631 | None:intergenic | 30.0% |
| AGTAGTGTGTTTGTATAGAA+AGG | + | chr8_2:42572627-42572646 | Msa1248510:intron | 30.0% | |
| !!! | AGCGATTATTTTTGAGCAAA+TGG | - | chr8_2:42572743-42572762 | None:intergenic | 30.0% |
| !! | ATGACGATATTGGTTTATCA+CGG | + | chr8_2:42572768-42572787 | Msa1248510:intron | 30.0% |
| AATGCCTTCTATAAAACCAT+TGG | - | chr8_2:42572998-42573017 | None:intergenic | 30.0% | |
| TAGAATTATGTGTCCAAATG+AGG | + | chr8_2:42573149-42573168 | Msa1248510:intron | 30.0% | |
| GAAGTTTCAAATCTCACAAT+TGG | - | chr8_2:42573484-42573503 | None:intergenic | 30.0% | |
| ! | CAAAACAAAGGCATAAGATA+AGG | - | chr8_2:42573568-42573587 | None:intergenic | 30.0% |
| ! | TGTCTATCGAATATCGTTTT+TGG | + | chr8_2:42573945-42573964 | Msa1248510:intron | 30.0% |
| !! | ACTTTTACTTTTCGGATTAC+TGG | + | chr8_2:42574120-42574139 | Msa1248510:intron | 30.0% |
| TTAGCACATATGCATTTATC+TGG | - | chr8_2:42574220-42574239 | None:intergenic | 30.0% | |
| GATATTGAGAATTGATGAAG+GGG | - | chr8_2:42574390-42574409 | None:intergenic | 30.0% | |
| CAGATATTGAGAATTGATGA+AGG | - | chr8_2:42574392-42574411 | None:intergenic | 30.0% | |
| !! | TGATTTTCCTTTTGTTGCTT+GGG | - | chr8_2:42574624-42574643 | None:intergenic | 30.0% |
| ! | TTGATTTTCCTTTTGTTGCT+TGG | - | chr8_2:42574625-42574644 | None:intergenic | 30.0% |
| AAGCAACAAAAGGAAAATCA+AGG | + | chr8_2:42574624-42574643 | Msa1248510:CDS | 30.0% | |
| AGCAACAAAAGGAAAATCAA+GGG | + | chr8_2:42574625-42574644 | Msa1248510:CDS | 30.0% | |
| ATCTCTCATTGCAAATTTGT+AGG | - | chr8_2:42574653-42574672 | None:intergenic | 30.0% | |
| AAGTCTCTTTCTAGATTTAG+TGG | + | chr8_2:42574696-42574715 | Msa1248510:CDS | 30.0% | |
| AATTAAGATTTAGGGACCTT+AGG | + | chr8_2:42574802-42574821 | Msa1248510:CDS | 30.0% | |
| CAATCCCAAATCAATTTCAT+GGG | + | chr8_2:42574957-42574976 | Msa1248510:CDS | 30.0% | |
| ATGCTACATCTACAAAACTT+GGG | - | chr8_2:42575151-42575170 | None:intergenic | 30.0% | |
| AATGCTACATCTACAAAACT+TGG | - | chr8_2:42575152-42575171 | None:intergenic | 30.0% | |
| ! | AGTTTGGAACAACAAAAAAG+CGG | - | chr8_2:42575203-42575222 | None:intergenic | 30.0% |
| TCCAAACTTCCATTGTAATA+CGG | + | chr8_2:42575215-42575234 | Msa1248510:three_prime_UTR | 30.0% | |
| ! | TTTCAAGTAAAGTACCTAGA+CGG | - | chr8_2:42575312-42575331 | None:intergenic | 30.0% |
| ACTTGAAATATAGATCACGA+TGG | + | chr8_2:42575324-42575343 | Msa1248510:three_prime_UTR | 30.0% | |
| ATGAAAGTTCCTAATCATGA+AGG | - | chr8_2:42575377-42575396 | None:intergenic | 30.0% | |
| TAGGAACTTTCATATGTTGA+TGG | + | chr8_2:42575384-42575403 | Msa1248510:three_prime_UTR | 30.0% | |
| !! | AAGGAGTATCATTGAACTCA+TGG | + | chr8_2:42571468-42571487 | Msa1248510:intron | 35.0% |
| AAAGAAGATTGAGATAGAGG+TGG | - | chr8_2:42571689-42571708 | None:intergenic | 35.0% | |
| CAGAAAGAAGATTGAGATAG+AGG | - | chr8_2:42571692-42571711 | None:intergenic | 35.0% | |
| ACAAAGTTTCAACTCAGAAG+GGG | + | chr8_2:42571982-42572001 | Msa1248510:CDS | 35.0% | |
| AAGTTGAATGTGGTGTGAAA+AGG | + | chr8_2:42572089-42572108 | Msa1248510:CDS | 35.0% | |
| ACTAAATATGGTCGAGTACA+TGG | - | chr8_2:42572460-42572479 | None:intergenic | 35.0% | |
| CGACCATATTTAGTGTGATA+AGG | + | chr8_2:42572466-42572485 | Msa1248510:intron | 35.0% | |
| ATAACTAGATAACGTGTCCT+AGG | + | chr8_2:42572592-42572611 | Msa1248510:intron | 35.0% | |
| TTGTATAGAAAGGTCTTCTC+AGG | + | chr8_2:42572637-42572656 | Msa1248510:intron | 35.0% | |
| ACTAATCCGCTATGAGATTA+AGG | - | chr8_2:42572684-42572703 | None:intergenic | 35.0% | |
| !! | TTTATAGAAGGCATTGCATC+AGG | + | chr8_2:42573003-42573022 | Msa1248510:intron | 35.0% |
| !! | TTATAGAAGGCATTGCATCA+GGG | + | chr8_2:42573004-42573023 | Msa1248510:intron | 35.0% |
| ! | ATTTCTAGGTCTTCCTCATT+TGG | - | chr8_2:42573165-42573184 | None:intergenic | 35.0% |
| ! | AAGTCTTATCCCACTAAGTA+GGG | - | chr8_2:42573290-42573309 | None:intergenic | 35.0% |
| TCAGCAAAGTTCAACACAAT+TGG | + | chr8_2:42573386-42573405 | Msa1248510:intron | 35.0% | |
| CAACACAATTGGTAAATAGC+TGG | + | chr8_2:42573397-42573416 | Msa1248510:intron | 35.0% | |
| GTCCTAGGTTGTTTATAGAA+AGG | + | chr8_2:42573427-42573446 | Msa1248510:intron | 35.0% | |
| CGTCTTTGAGTGAATCTTTA+GGG | - | chr8_2:42573525-42573544 | None:intergenic | 35.0% | |
| TCGTCTTTGAGTGAATCTTT+AGG | - | chr8_2:42573526-42573545 | None:intergenic | 35.0% | |
| TGCAGCCTCTATAAAATCAT+TGG | - | chr8_2:42573775-42573794 | None:intergenic | 35.0% | |
| ACAATGTCCAGTATGATGTT+TGG | + | chr8_2:42573794-42573813 | Msa1248510:intron | 35.0% | |
| CAATGTCCAGTATGATGTTT+GGG | + | chr8_2:42573795-42573814 | Msa1248510:intron | 35.0% | |
| TTACATCCCAAACATCATAC+TGG | - | chr8_2:42573804-42573823 | None:intergenic | 35.0% | |
| CAAGCATTTGCATTATTCAG+AGG | + | chr8_2:42574024-42574043 | Msa1248510:intron | 35.0% | |
| TTCTTTACTTGCTTTAGCAC+AGG | - | chr8_2:42574753-42574772 | None:intergenic | 35.0% | |
| GCTAAAGCAAGTAAAGAACA+AGG | + | chr8_2:42574755-42574774 | Msa1248510:CDS | 35.0% | |
| TAAAGCTGCAAAAGTTGCAT+TGG | + | chr8_2:42574899-42574918 | Msa1248510:CDS | 35.0% | |
| GCAATCCCAAATCAATTTCA+TGG | + | chr8_2:42574956-42574975 | Msa1248510:CDS | 35.0% | |
| ! | GTCACCCATGAAATTGATTT+GGG | - | chr8_2:42574964-42574983 | None:intergenic | 35.0% |
| TGTCACCCATGAAATTGATT+TGG | - | chr8_2:42574965-42574984 | None:intergenic | 35.0% | |
| TTCTCATTGCCGTATTACAA+TGG | - | chr8_2:42575227-42575246 | None:intergenic | 35.0% | |
| TAATTGTCTTGTATCCGTCT+AGG | + | chr8_2:42575295-42575314 | Msa1248510:three_prime_UTR | 35.0% | |
| ! | GATGGTATTTTCCAAGATGA+GGG | + | chr8_2:42575342-42575361 | Msa1248510:three_prime_UTR | 35.0% |
| TAGCAAATGCCTTGACATGT+TGG | + | chr8_2:42571342-42571361 | Msa1248510:intron | 40.0% | |
| CCAGAGAAACGTGGTTATTA+TGG | - | chr8_2:42571631-42571650 | None:intergenic | 40.0% | |
| CCATAATAACCACGTTTCTC+TGG | + | chr8_2:42571628-42571647 | Msa1248510:CDS | 40.0% | |
| ATGAAAGAACCAGAGAAACG+TGG | - | chr8_2:42571640-42571659 | None:intergenic | 40.0% | |
| !!! | TGGTGGTTTTGGAAGATTGA+TGG | - | chr8_2:42571669-42571688 | None:intergenic | 40.0% |
| GGAAGAATGAAGATGATACC+TGG | - | chr8_2:42571764-42571783 | None:intergenic | 40.0% | |
| CAAAGTTTCAACTCAGAAGG+GGG | + | chr8_2:42571983-42572002 | Msa1248510:CDS | 40.0% | |
| AAAGTTTCAACTCAGAAGGG+GGG | + | chr8_2:42571984-42572003 | Msa1248510:CDS | 40.0% | |
| AAGAAGGAAGAGATTGAAGG+TGG | + | chr8_2:42572007-42572026 | Msa1248510:CDS | 40.0% | |
| AGATTGAAGGTGGAGAAGAA+GGG | + | chr8_2:42572017-42572036 | Msa1248510:CDS | 40.0% | |
| ! | GTGAAATAGTGGAAGAGTTG+AGG | + | chr8_2:42572059-42572078 | Msa1248510:CDS | 40.0% |
| ! | AATAGTGGAAGAGTTGAGGA+AGG | + | chr8_2:42572063-42572082 | Msa1248510:CDS | 40.0% |
| AGGAAGGAAGAAGTTGAATG+TGG | + | chr8_2:42572079-42572098 | Msa1248510:CDS | 40.0% | |
| ! | GTGGACTAAGGAACAAGAAT+TGG | + | chr8_2:42572147-42572166 | Msa1248510:CDS | 40.0% |
| TTGTTCCAGAAATGTGGACT+AGG | - | chr8_2:42572202-42572221 | None:intergenic | 40.0% | |
| GAAACGTTGTTCCAGAAATG+TGG | - | chr8_2:42572208-42572227 | None:intergenic | 40.0% | |
| GTGATGCCTTAATCTCATAG+CGG | + | chr8_2:42572675-42572694 | Msa1248510:intron | 40.0% | |
| TCGCTCAAAGATGACGATAT+TGG | + | chr8_2:42572758-42572777 | Msa1248510:intron | 40.0% | |
| ATAAGGAAGGAATTGCAGCA+GGG | + | chr8_2:42572901-42572920 | Msa1248510:CDS | 40.0% | |
| ! | CAAGTCTTATCCCACTAAGT+AGG | - | chr8_2:42573291-42573310 | None:intergenic | 40.0% |
| CTACTTAGTGGGATAAGACT+TGG | + | chr8_2:42573289-42573308 | Msa1248510:intron | 40.0% | |
| TGAACTTTGCTGATCCTTGA+CGG | - | chr8_2:42573379-42573398 | None:intergenic | 40.0% | |
| GGCCTTTCTATAAACAACCT+AGG | - | chr8_2:42573432-42573451 | None:intergenic | 40.0% | |
| !! | GAGTGAATCTTTAGGGCAAA+TGG | - | chr8_2:42573518-42573537 | None:intergenic | 40.0% |
| TCACTCAAAGACGATGACTT+TGG | + | chr8_2:42573532-42573551 | Msa1248510:intron | 40.0% | |
| GTGGCACACAATGATAAAGA+TGG | + | chr8_2:42573660-42573679 | Msa1248510:CDS | 40.0% | |
| ATAAAGATGGCATTGCAGCA+AGG | + | chr8_2:42573673-42573692 | Msa1248510:CDS | 40.0% | |
| TAAAGATGGCATTGCAGCAA+GGG | + | chr8_2:42573674-42573693 | Msa1248510:CDS | 40.0% | |
| CTAGATAGATCACTTGGTCA+TGG | - | chr8_2:42574003-42574022 | None:intergenic | 40.0% | |
| CATGACCAAGTGATCTATCT+AGG | + | chr8_2:42574001-42574020 | Msa1248510:intron | 40.0% | |
| AGGTCAAGCTTTCAATTGCA+TGG | + | chr8_2:42574044-42574063 | Msa1248510:intron | 40.0% | |
| GGTCAAGCTTTCAATTGCAT+GGG | + | chr8_2:42574045-42574064 | Msa1248510:intron | 40.0% | |
| GTCAAGCTTTCAATTGCATG+GGG | + | chr8_2:42574046-42574065 | Msa1248510:intron | 40.0% | |
| TCAAGCTTTCAATTGCATGG+GGG | + | chr8_2:42574047-42574066 | Msa1248510:intron | 40.0% | |
| !! | GCATATGTGCTAATTTGCTC+TGG | + | chr8_2:42574227-42574246 | Msa1248510:intron | 40.0% |
| TGCTGTACAAAATCTGTTGC+AGG | + | chr8_2:42574260-42574279 | Msa1248510:intron | 40.0% | |
| AAAATCTGTTGCAGGTACCT+GGG | + | chr8_2:42574268-42574287 | Msa1248510:intron | 40.0% | |
| ! | CAATCTTGTTTAGACTTCCC+AGG | - | chr8_2:42574288-42574307 | None:intergenic | 40.0% |
| AGTAAACTGCTCATACCTAC+TGG | + | chr8_2:42574414-42574433 | Msa1248510:CDS | 40.0% | |
| TTCTGAGTAACGATGCTCTT+TGG | - | chr8_2:42574471-42574490 | None:intergenic | 40.0% | |
| GGAGTACAAAGTTCTTCACT+AGG | - | chr8_2:42574603-42574622 | None:intergenic | 40.0% | |
| TTGTACTCCCAAGCAACAAA+AGG | + | chr8_2:42574614-42574633 | Msa1248510:CDS | 40.0% | |
| TCTAGATTTAGTGGCTCATC+AGG | + | chr8_2:42574705-42574724 | Msa1248510:CDS | 40.0% | |
| TTTACTTGCTTTAGCACAGG+TGG | - | chr8_2:42574750-42574769 | None:intergenic | 40.0% | |
| AACAAATCTGTAGCTGGAGA+AGG | + | chr8_2:42574849-42574868 | Msa1248510:CDS | 40.0% | |
| AGTTGAAGGTGAAAGTCCAT+AGG | + | chr8_2:42575022-42575041 | Msa1248510:CDS | 40.0% | |
| GCCGTATTACAATGGAAGTT+TGG | - | chr8_2:42575219-42575238 | None:intergenic | 40.0% | |
| ! | CGATGGTATTTTCCAAGATG+AGG | + | chr8_2:42575341-42575360 | Msa1248510:three_prime_UTR | 40.0% |
| TGTCATGCTCCTTCATGATT+AGG | + | chr8_2:42575365-42575384 | Msa1248510:three_prime_UTR | 40.0% | |
| GATGTCGTACCAACATGTCA+AGG | - | chr8_2:42571354-42571373 | None:intergenic | 45.0% | |
| ! | CACGATCTGTGAAGGTTTTG+TGG | - | chr8_2:42571597-42571616 | None:intergenic | 45.0% |
| !! | TGAGATAGAGGTGGTGGTTT+TGG | - | chr8_2:42571680-42571699 | None:intergenic | 45.0% |
| GAAGATTGAGATAGAGGTGG+TGG | - | chr8_2:42571686-42571705 | None:intergenic | 45.0% | |
| GGGAAGAAGGAAGAGATTGA+AGG | + | chr8_2:42572004-42572023 | Msa1248510:CDS | 45.0% | |
| GAGATTGAAGGTGGAGAAGA+AGG | + | chr8_2:42572016-42572035 | Msa1248510:CDS | 45.0% | |
| AAGGTGGAGAAGAAGGGAAA+AGG | + | chr8_2:42572023-42572042 | Msa1248510:CDS | 45.0% | |
| GCACGATGGTTGTGAAATAG+TGG | + | chr8_2:42572048-42572067 | Msa1248510:CDS | 45.0% | |
| GTGAAAAGGAAGAGAAAGCG+CGG | + | chr8_2:42572103-42572122 | Msa1248510:CDS | 45.0% | |
| !! | ACAAGAATTGGCTCTGCGAA+CGG | + | chr8_2:42572159-42572178 | Msa1248510:CDS | 45.0% |
| CAAAGCCTAGTCCACATTTC+TGG | + | chr8_2:42572194-42572213 | Msa1248510:CDS | 45.0% | |
| CTGGAACAACGTTTCGAAAC+TGG | + | chr8_2:42572213-42572232 | Msa1248510:CDS | 45.0% | |
| TCTCAGGAGAGTCAAAACAC+AGG | + | chr8_2:42572653-42572672 | Msa1248510:intron | 45.0% | |
| CGATGCTGCACACAATGATA+AGG | + | chr8_2:42572884-42572903 | Msa1248510:CDS | 45.0% | |
| GCTGCACACAATGATAAGGA+AGG | + | chr8_2:42572888-42572907 | Msa1248510:CDS | 45.0% | |
| GATAAGGAAGGAATTGCAGC+AGG | + | chr8_2:42572900-42572919 | Msa1248510:CDS | 45.0% | |
| CATTGCATCAGGGTTTACAG+CGG | + | chr8_2:42573014-42573033 | Msa1248510:intron | 45.0% | |
| ACGTAGTTGACCCTACTTAG+TGG | + | chr8_2:42573277-42573296 | Msa1248510:intron | 45.0% | |
| CGTAGTTGACCCTACTTAGT+GGG | + | chr8_2:42573278-42573297 | Msa1248510:intron | 45.0% | |
| GAACTTTGCTGATCCTTGAC+GGG | - | chr8_2:42573378-42573397 | None:intergenic | 45.0% | |
| ATAGCTGGATCATGTGTCCT+AGG | + | chr8_2:42573412-42573431 | Msa1248510:intron | 45.0% | |
| GTTTATAGAAAGGCCGTGTC+CGG | + | chr8_2:42573437-42573456 | Msa1248510:intron | 45.0% | |
| TCCAACAGTTCTACAGCAAC+CGG | - | chr8_2:42573733-42573752 | None:intergenic | 45.0% | |
| GCTTGCCTAGATAGATCACT+TGG | - | chr8_2:42574009-42574028 | None:intergenic | 45.0% | |
| CAAGCTTTCAATTGCATGGG+GGG | + | chr8_2:42574048-42574067 | Msa1248510:intron | 45.0% | |
| CAAAATCTGTTGCAGGTACC+TGG | + | chr8_2:42574267-42574286 | Msa1248510:intron | 45.0% | |
| TCAATGTCAGCCTCGATCAA+GGG | + | chr8_2:42574344-42574363 | Msa1248510:CDS | 45.0% | |
| GCTCATACCTACTGGAAAGA+AGG | + | chr8_2:42574422-42574441 | Msa1248510:CDS | 45.0% | |
| ATACCTACTGGAAAGAAGGC+CGG | + | chr8_2:42574426-42574445 | Msa1248510:CDS | 45.0% | |
| TAGAAGCTGCTCTTCTCCTA+AGG | - | chr8_2:42574821-42574840 | None:intergenic | 45.0% | |
| TCTGTAGCTGGAGAAGGAAA+AGG | + | chr8_2:42574855-42574874 | Msa1248510:CDS | 45.0% | |
| !! | CTGGAGAAGGAAAAGGCATT+CGG | + | chr8_2:42574862-42574881 | Msa1248510:CDS | 45.0% |
| !! | TGACAGTTGTAGTTCTGACG+AGG | + | chr8_2:42574980-42574999 | Msa1248510:CDS | 45.0% |
| GAGGACAATGACGATGACAT+TGG | + | chr8_2:42574999-42575018 | Msa1248510:CDS | 45.0% | |
| GACGATGACATTGGAGTTGA+AGG | + | chr8_2:42575008-42575027 | Msa1248510:CDS | 45.0% | |
| ATTAGCTCGAGAAGAGCCTA+TGG | - | chr8_2:42575041-42575060 | None:intergenic | 45.0% | |
| !!! | TATTTTTTTTATTTTTTTCA+AGG | - | chr8_2:42573910-42573929 | None:intergenic | 5.0% |
| GAGAGTTGCACGATCTGTGA+AGG | - | chr8_2:42571605-42571624 | None:intergenic | 50.0% | |
| GTTGGAACTCGAACTCGAAC+AGG | - | chr8_2:42571717-42571736 | None:intergenic | 50.0% | |
| ! | GAAGGGAAAAGGAAGCACGA+TGG | + | chr8_2:42572034-42572053 | Msa1248510:CDS | 50.0% |
| ! | AAAAGGAAGAGAAAGCGCGG+TGG | + | chr8_2:42572106-42572125 | Msa1248510:CDS | 50.0% |
| ! | GTGGTGGTGAAGTTGCACAA+GGG | + | chr8_2:42572125-42572144 | Msa1248510:CDS | 50.0% |
| !! | AGTTGCACAAGGGTGGACTA+AGG | + | chr8_2:42572135-42572154 | Msa1248510:CDS | 50.0% |
| AATTGCAGCAGGGCTTACAG+CGG | + | chr8_2:42572911-42572930 | Msa1248510:CDS | 50.0% | |
| TAGAGTCGCACATAGTGTGG+TGG | + | chr8_2:42572934-42572953 | Msa1248510:intron | 50.0% | |
| GCATACTATGGAACCCGTCA+AGG | + | chr8_2:42573362-42573381 | Msa1248510:intron | 50.0% | |
| ACTAATCCGCTCTGACTCTC+CGG | - | chr8_2:42573459-42573478 | None:intergenic | 50.0% | |
| ATTGCAGCAAGGGCTTACAG+TGG | + | chr8_2:42573684-42573703 | Msa1248510:CDS | 50.0% | |
| CTTGATCGAGGCTGACATTG+AGG | - | chr8_2:42574345-42574364 | None:intergenic | 50.0% | |
| CTCAATGTCAGCCTCGATCA+AGG | + | chr8_2:42574343-42574362 | Msa1248510:CDS | 50.0% | |
| ATTGCCTTTGCCCTTGATCG+AGG | - | chr8_2:42574357-42574376 | None:intergenic | 50.0% | |
| GGAGAAGAGCAGCTTCTACA+CGG | + | chr8_2:42574823-42574842 | Msa1248510:CDS | 50.0% | |
| GAGAAGAGCAGCTTCTACAC+GGG | + | chr8_2:42574824-42574843 | Msa1248510:CDS | 50.0% | |
| CGGGCAAACAAATCTGTAGC+TGG | + | chr8_2:42574843-42574862 | Msa1248510:CDS | 50.0% | |
| CAACTCAGAAGGGGGGAAGA+AGG | + | chr8_2:42571991-42572010 | Msa1248510:CDS | 55.0% | |
| ! | GGTGGTGGTGAAGTTGCACA+AGG | + | chr8_2:42572124-42572143 | Msa1248510:CDS | 55.0% |
| GTGGTGAAGTTGCACAAGGG+TGG | + | chr8_2:42572128-42572147 | Msa1248510:CDS | 55.0% | |
| CATTGTGTGCAGCATCGCAG+TGG | - | chr8_2:42572881-42572900 | None:intergenic | 55.0% | |
| CGGTAGAGTCGCACATAGTG+TGG | + | chr8_2:42572931-42572950 | Msa1248510:intron | 55.0% | |
| CATTGTGTGCCACATCGCAG+CGG | - | chr8_2:42573653-42573672 | None:intergenic | 55.0% | |
| TGGTAGAGCTGCACAGAGTG+CGG | + | chr8_2:42573704-42573723 | Msa1248510:CDS | 55.0% | |
| GCCGGTTGCTGTAGAACTGT+TGG | + | chr8_2:42573729-42573748 | Msa1248510:intron | 55.0% | |
| GCTGACATTGAGGTGGTGTG+TGG | - | chr8_2:42574335-42574354 | None:intergenic | 55.0% | |
| GATCGAGGCTGACATTGAGG+TGG | - | chr8_2:42574342-42574361 | None:intergenic | 55.0% | |
| TCAGCCTCGATCAAGGGCAA+AGG | + | chr8_2:42574350-42574369 | Msa1248510:CDS | 55.0% | |
| TTGCCGGCCTTCTTTCCAGT+AGG | - | chr8_2:42574432-42574451 | None:intergenic | 55.0% | |
| GGAGCATGACACCCTCATCT+TGG | - | chr8_2:42575356-42575375 | None:intergenic | 55.0% | |
| ! | AGGAAGAGAAAGCGCGGTGG+TGG | + | chr8_2:42572109-42572128 | Msa1248510:CDS | 60.0% |
| TGTGTGCAGCATCGCAGTGG+CGG | - | chr8_2:42572878-42572897 | None:intergenic | 60.0% | |
| GAGGTGGTGTGTGGAAGTCG+TGG | - | chr8_2:42574326-42574345 | None:intergenic | 60.0% | |
| CCGCTCTGACTCTCCGGACA+CGG | - | chr8_2:42573453-42573472 | None:intergenic | 65.0% | |
| CCGTGTCCGGAGAGTCAGAG+CGG | + | chr8_2:42573450-42573469 | Msa1248510:intron | 65.0% | |
| ACAGTCCAGCCGCTGCGATG+TGG | + | chr8_2:42573641-42573660 | Msa1248510:intron | 65.0% | |
| GCTGCACAGAGTGCGGTTGC+CGG | + | chr8_2:42573711-42573730 | Msa1248510:CDS | 65.0% | |
| GTGTGCCACATCGCAGCGGC+TGG | - | chr8_2:42573649-42573668 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 42571212 | 42575409 | 42571212 | ID=Msa1248510;Name=Msa1248510 |
| chr8_2 | mRNA | 42571212 | 42575409 | 42571212 | ID=Msa1248510-mRNA-1;Parent=Msa1248510;Name=Msa1248510-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.2|0.33|0.5|1|1|6|366|491 |
| chr8_2 | exon | 42571212 | 42571297 | 42571212 | ID=Msa1248510-mRNA-1:exon:12899;Parent=Msa1248510-mRNA-1 |
| chr8_2 | exon | 42571556 | 42571764 | 42571556 | ID=Msa1248510-mRNA-1:exon:12900;Parent=Msa1248510-mRNA-1 |
| chr8_2 | exon | 42571978 | 42572234 | 42571978 | ID=Msa1248510-mRNA-1:exon:12901;Parent=Msa1248510-mRNA-1 |
| chr8_2 | exon | 42572873 | 42572932 | 42572873 | ID=Msa1248510-mRNA-1:exon:12902;Parent=Msa1248510-mRNA-1 |
| chr8_2 | exon | 42573645 | 42573746 | 42573645 | ID=Msa1248510-mRNA-1:exon:12903;Parent=Msa1248510-mRNA-1 |
| chr8_2 | exon | 42574282 | 42575409 | 42574282 | ID=Msa1248510-mRNA-1:exon:12904;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42571212 | 42571297 | 42571212 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42571556 | 42571764 | 42571556 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42571978 | 42572234 | 42571978 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42572873 | 42572932 | 42572873 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42573645 | 42573746 | 42573645 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | CDS | 42574282 | 42575043 | 42574282 | ID=Msa1248510-mRNA-1:cds;Parent=Msa1248510-mRNA-1 |
| chr8_2 | three_prime_UTR | 42575044 | 42575409 | 42575044 | ID=Msa1248510-mRNA-1:three_prime_utr;Parent=Msa1248510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
