Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249810 | XP_013445985.1 | 82.422 | 256 | 26 | 2 | 4 | 241 | 1 | 255 | 2.27e-143 | 411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249810 | sp|P27141|CAHC_TOBAC | 63.566 | 258 | 73 | 3 | 3 | 240 | 64 | 320 | 1.05e-110 | 323 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1249780 | Msa1249810 | 0.803569 | 3.274135e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249810 | MtrunA17_Chr8g0365441 | 82.422 | 256 | 26 | 2 | 4 | 241 | 1 | 255 | 2.09e-147 | 411 |
| Msa1249810 | MtrunA17_Chr5g0413551 | 70.312 | 256 | 56 | 2 | 4 | 240 | 1 | 255 | 5.05e-129 | 365 |
| Msa1249810 | MtrunA17_Chr6g0450641 | 58.915 | 258 | 83 | 2 | 6 | 240 | 73 | 330 | 6.58e-103 | 301 |
| Msa1249810 | MtrunA17_Chr3g0117661 | 49.609 | 256 | 110 | 1 | 4 | 240 | 1 | 256 | 3.59e-78 | 236 |
| Msa1249810 | MtrunA17_Chr3g0117691 | 48.438 | 256 | 113 | 1 | 4 | 240 | 1 | 256 | 1.01e-76 | 232 |
| Msa1249810 | MtrunA17_Chr2g0279581 | 46.632 | 193 | 81 | 3 | 61 | 234 | 94 | 283 | 2.99e-56 | 181 |
| Msa1249810 | MtrunA17_Chr5g0427341 | 46.196 | 184 | 78 | 3 | 70 | 234 | 108 | 289 | 1.95e-49 | 164 |
| Msa1249810 | MtrunA17_Chr3g0117671 | 70.455 | 44 | 13 | 0 | 87 | 130 | 1 | 44 | 2.90e-17 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249810 | AT5G14740.9 | 62.162 | 259 | 69 | 3 | 4 | 237 | 1 | 255 | 1.00e-107 | 311 |
| Msa1249810 | AT5G14740.8 | 62.162 | 259 | 69 | 3 | 4 | 237 | 1 | 255 | 1.00e-107 | 311 |
| Msa1249810 | AT5G14740.7 | 62.162 | 259 | 69 | 3 | 4 | 237 | 1 | 255 | 1.00e-107 | 311 |
| Msa1249810 | AT5G14740.2 | 62.162 | 259 | 69 | 3 | 4 | 237 | 1 | 255 | 1.00e-107 | 311 |
| Msa1249810 | AT5G14740.6 | 62.162 | 259 | 69 | 3 | 4 | 237 | 1 | 255 | 1.00e-107 | 311 |
| Msa1249810 | AT5G14740.1 | 62.162 | 259 | 69 | 3 | 4 | 237 | 73 | 327 | 1.14e-106 | 311 |
| Msa1249810 | AT5G14740.4 | 62.016 | 258 | 70 | 3 | 4 | 237 | 73 | 326 | 4.32e-106 | 310 |
| Msa1249810 | AT3G01500.4 | 60.536 | 261 | 76 | 3 | 4 | 240 | 1 | 258 | 3.59e-105 | 305 |
| Msa1249810 | AT3G01500.1 | 60.536 | 261 | 76 | 3 | 4 | 240 | 1 | 258 | 5.33e-105 | 305 |
| Msa1249810 | AT5G14740.3 | 61.240 | 258 | 72 | 3 | 4 | 237 | 73 | 326 | 5.50e-105 | 307 |
| Msa1249810 | AT3G01500.3 | 60.305 | 262 | 77 | 3 | 3 | 240 | 77 | 335 | 3.71e-104 | 305 |
| Msa1249810 | AT1G70410.3 | 60.078 | 258 | 82 | 3 | 4 | 241 | 1 | 257 | 4.25e-104 | 302 |
| Msa1249810 | AT1G70410.1 | 60.078 | 258 | 82 | 3 | 4 | 241 | 1 | 257 | 4.25e-104 | 302 |
| Msa1249810 | AT3G01500.2 | 60.305 | 262 | 77 | 3 | 3 | 240 | 77 | 335 | 4.26e-104 | 305 |
| Msa1249810 | AT1G70410.2 | 59.924 | 262 | 82 | 4 | 1 | 241 | 20 | 279 | 1.17e-103 | 302 |
| Msa1249810 | AT1G23730.2 | 57.752 | 258 | 88 | 3 | 4 | 241 | 1 | 257 | 6.68e-103 | 299 |
| Msa1249810 | AT1G23730.1 | 57.752 | 258 | 88 | 3 | 4 | 241 | 1 | 257 | 6.68e-103 | 299 |
| Msa1249810 | AT5G14740.5 | 65.263 | 190 | 56 | 2 | 4 | 187 | 73 | 258 | 6.28e-80 | 243 |
| Msa1249810 | AT4G33580.3 | 41.949 | 236 | 108 | 6 | 25 | 236 | 52 | 282 | 2.01e-50 | 167 |
| Msa1249810 | AT4G33580.1 | 41.949 | 236 | 108 | 6 | 25 | 236 | 52 | 282 | 2.01e-50 | 167 |
| Msa1249810 | AT4G33580.2 | 47.541 | 183 | 75 | 3 | 73 | 236 | 103 | 283 | 3.31e-50 | 166 |
| Msa1249810 | AT1G58180.7 | 40.331 | 181 | 86 | 3 | 72 | 231 | 42 | 221 | 2.68e-41 | 141 |
| Msa1249810 | AT1G58180.3 | 40.331 | 181 | 86 | 3 | 72 | 231 | 42 | 221 | 2.68e-41 | 141 |
| Msa1249810 | AT1G58180.6 | 40.331 | 181 | 86 | 3 | 72 | 231 | 42 | 221 | 2.68e-41 | 141 |
| Msa1249810 | AT1G58180.2 | 40.331 | 181 | 86 | 3 | 72 | 231 | 93 | 272 | 6.65e-41 | 142 |
| Msa1249810 | AT1G58180.4 | 40.331 | 181 | 86 | 3 | 72 | 231 | 93 | 272 | 6.65e-41 | 142 |
| Msa1249810 | AT1G58180.1 | 43.396 | 159 | 68 | 3 | 72 | 209 | 93 | 250 | 3.33e-37 | 131 |
| Msa1249810 | AT1G58180.5 | 50.000 | 118 | 56 | 2 | 72 | 187 | 93 | 209 | 5.70e-33 | 121 |
Find 68 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTGCTGGATTACAAATT+TGG | 0.137399 | 8_2:+44946167 | None:intergenic |
| ATATGCAGTTGTACATTTAA+AGG | 0.193143 | 8_2:-44948003 | Msa1249810:intron |
| GATGCCTTAGTAATCTTAAA+AGG | 0.231303 | 8_2:+44945137 | None:intergenic |
| GTGGAGAATATTGTGGTTAT+TGG | 0.232163 | 8_2:-44946717 | Msa1249810:CDS |
| GACCTTTGGGCTCTGGCCTT+TGG | 0.245680 | 8_2:+44949288 | None:intergenic |
| TCTTTAACTTTGGACTTTGC+TGG | 0.291086 | 8_2:+44946154 | None:intergenic |
| CAGAGTTGACGAAGCTTCTA+AGG | 0.294876 | 8_2:-44951899 | Msa1249810:intron |
| CAGTTGCTGTGGAGGTATAA+AGG | 0.311502 | 8_2:-44946691 | Msa1249810:CDS |
| CTTGCAGTGGTCCCATCATC+TGG | 0.312806 | 8_2:+44946654 | None:intergenic |
| CAGAGCAAGTATTCAGGAAC+TGG | 0.335749 | 8_2:-44948038 | Msa1249810:CDS |
| GCAAGTTCACCATACACTTC+TGG | 0.358514 | 8_2:+44949310 | None:intergenic |
| TCAACCTGGTGAAGCCTTTG+TGG | 0.374370 | 8_2:-44948237 | Msa1249810:CDS |
| TAACTGCAGAGCAAGTATTC+AGG | 0.392076 | 8_2:-44948044 | Msa1249810:intron |
| GGAAGCTGTTAATGTCTCTC+TGG | 0.396743 | 8_2:-44945295 | Msa1249810:CDS |
| CCACTTCGAATTCTTTCATC+CGG | 0.397203 | 8_2:+44950865 | None:intergenic |
| AACTAATTAACCTTGTCATA+TGG | 0.407155 | 8_2:+44948188 | None:intergenic |
| ACATGCTGACCTTTGGGCTC+TGG | 0.418961 | 8_2:+44949281 | None:intergenic |
| AGTTGCTGTGGAGGTATAAA+GGG | 0.452052 | 8_2:-44946690 | Msa1249810:CDS |
| GACGACGGAGCTGGTTGCGC+CGG | 0.465223 | 8_2:-44950904 | Msa1249810:CDS |
| ACAACAGCATCTCTTACAAA+TGG | 0.482177 | 8_2:+44945255 | None:intergenic |
| ACGACGGAGCTGGTTGCGCC+GGG | 0.496071 | 8_2:-44950903 | Msa1249810:CDS |
| CGTCAACTGCTTGATCTTTG+CGG | 0.498396 | 8_2:+44950923 | None:intergenic |
| GAACCATGTTGGCAATGTTA+CGG | 0.502088 | 8_2:+44948213 | None:intergenic |
| CACTTCGAATTCTTTCATCC+GGG | 0.509501 | 8_2:+44950866 | None:intergenic |
| CAGGTTGAAAATTTAGAACA+TGG | 0.510353 | 8_2:+44948252 | None:intergenic |
| CTAATGTCCATCCCAGATGA+TGG | 0.510427 | 8_2:-44946666 | Msa1249810:CDS |
| TGAAAATTTAGAACATGGGA+TGG | 0.524270 | 8_2:+44948257 | None:intergenic |
| GAAGCTGTTAATGTCTCTCT+GGG | 0.527741 | 8_2:-44945294 | Msa1249810:CDS |
| CAAGCAGTTGACGACGGAGC+TGG | 0.534939 | 8_2:-44950913 | Msa1249810:CDS |
| TTGCAGTGGTCCCATCATCT+GGG | 0.535229 | 8_2:+44946655 | None:intergenic |
| CGGAGCTGGTTGCGCCGGGT+CGG | 0.537126 | 8_2:-44950899 | Msa1249810:CDS |
| GGTCCGTAACATTGCCAACA+TGG | 0.556980 | 8_2:-44948216 | Msa1249810:CDS |
| AAGCTTCGTCAACTCTGCTA+TGG | 0.559238 | 8_2:+44951905 | None:intergenic |
| GAAAATTTAGAACATGGGAT+GGG | 0.561077 | 8_2:+44948258 | None:intergenic |
| CGGACCACAAAGGCTTCACC+AGG | 0.568237 | 8_2:+44948233 | None:intergenic |
| ATTGGACACAGTTGCTGTGG+AGG | 0.570748 | 8_2:-44946699 | Msa1249810:CDS |
| TAATTAACCTTGTCATATGG+TGG | 0.572048 | 8_2:+44948191 | None:intergenic |
| GTGTAGAAGGTTGACATGGC+AGG | 0.582027 | 8_2:-44951945 | None:intergenic |
| TAATGTCCATCCCAGATGAT+GGG | 0.586539 | 8_2:-44946665 | Msa1249810:CDS |
| CAGTGACTTCATAGAGCAGT+GGG | 0.594973 | 8_2:-44946191 | Msa1249810:CDS |
| GTTATTGGACACAGTTGCTG+TGG | 0.600992 | 8_2:-44946702 | Msa1249810:CDS |
| TGCAGCGAGAAAGCTGACCT+CGG | 0.606649 | 8_2:-44950957 | Msa1249810:intron |
| AAGAAAACGATTGCTTTGAA+AGG | 0.606815 | 8_2:-44945231 | Msa1249810:CDS |
| CGGGTCAAAACTATCCGACC+CGG | 0.611594 | 8_2:+44950885 | None:intergenic |
| TATAGACTTATACCTTGCAG+TGG | 0.613690 | 8_2:+44946641 | None:intergenic |
| AGAGCAAGTATTCAGGAACT+GGG | 0.621056 | 8_2:-44948037 | Msa1249810:CDS |
| CAGATGATGGGACCACTGCA+AGG | 0.623424 | 8_2:-44946653 | Msa1249810:intron |
| GTCATATGGTGGAACCATGT+TGG | 0.623869 | 8_2:+44948202 | None:intergenic |
| AGGTTGAAAATTTAGAACAT+GGG | 0.629087 | 8_2:+44948253 | None:intergenic |
| GTTACAGGTGGAGAATATTG+TGG | 0.629503 | 8_2:-44946724 | Msa1249810:intron |
| TGCCAAAGGCCAGAGCCCAA+AGG | 0.639324 | 8_2:-44949290 | Msa1249810:intron |
| AGTGGTCCCATCATCTGGGA+TGG | 0.640032 | 8_2:+44946659 | None:intergenic |
| TAATCTTAAAAGGACACTGA+GGG | 0.640263 | 8_2:+44945147 | None:intergenic |
| ACAGTGACTTCATAGAGCAG+TGG | 0.642596 | 8_2:-44946192 | Msa1249810:intron |
| CATGGTTCCACCATATGACA+AGG | 0.644313 | 8_2:-44948198 | Msa1249810:intron |
| CGGATGAAAGAATTCGAAGT+GGG | 0.644322 | 8_2:-44950864 | Msa1249810:CDS |
| GTGTATGGTGAACTTGCCAA+AGG | 0.654902 | 8_2:-44949304 | Msa1249810:CDS |
| GGCAATGTTACGGACCACAA+AGG | 0.658911 | 8_2:+44948223 | None:intergenic |
| GTAATCTTAAAAGGACACTG+AGG | 0.677864 | 8_2:+44945146 | None:intergenic |
| TTGTGTGTAGAAGGTTGACA+TGG | 0.683135 | 8_2:-44951949 | None:intergenic |
| GGCAGGAGAGTCTTACGAGG+AGG | 0.686760 | 8_2:-44951928 | Msa1249810:CDS |
| AAAGATCAAGCAGTTGACGA+CGG | 0.688194 | 8_2:-44950919 | Msa1249810:CDS |
| CCGGATGAAAGAATTCGAAG+TGG | 0.688868 | 8_2:-44950865 | Msa1249810:CDS |
| TTGCGGCGGCAACATATCCG+AGG | 0.692615 | 8_2:+44950940 | None:intergenic |
| CAACTGCTTGATCTTTGCGG+CGG | 0.692624 | 8_2:+44950926 | None:intergenic |
| GAGCAAGTATTCAGGAACTG+GGG | 0.716151 | 8_2:-44948036 | Msa1249810:CDS |
| CATGGCAGGAGAGTCTTACG+AGG | 0.728592 | 8_2:-44951931 | Msa1249810:CDS |
| AAGCTGTTAATGTCTCTCTG+GGG | 0.771215 | 8_2:-44945293 | Msa1249810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTAAGAATAATTTTTTTTAT+AGG | + | chr8_2:44945322-44945341 | None:intergenic | 10.0% |
| !! | AAATAGTATAATAACAATTT+AGG | - | chr8_2:44945691-44945710 | Msa1249810:intron | 10.0% |
| !!! | ATTTTTTATTTCATTATAGA+GGG | + | chr8_2:44945726-44945745 | None:intergenic | 10.0% |
| !!! | TATTTTTTATTTCATTATAG+AGG | + | chr8_2:44945727-44945746 | None:intergenic | 10.0% |
| !! | AATAAAAAATAATAGTTGAA+AGG | - | chr8_2:44945736-44945755 | Msa1249810:intron | 10.0% |
| !!! | TATATTTTTAAGGTAAAATA+TGG | + | chr8_2:44946569-44946588 | None:intergenic | 10.0% |
| !!! | TATTTTACCTTAAAAATATA+AGG | - | chr8_2:44946569-44946588 | Msa1249810:intron | 10.0% |
| !!! | TCTAAATATACTTTTTTTTA+AGG | - | chr8_2:44947399-44947418 | Msa1249810:intron | 10.0% |
| !!! | CTAAATATACTTTTTTTTAA+GGG | - | chr8_2:44947400-44947419 | Msa1249810:intron | 10.0% |
| !!! | AAATATTCTTATTTTTTTTC+AGG | - | chr8_2:44947636-44947655 | Msa1249810:intron | 10.0% |
| !!! | AAATATTCTTATTTTTTTTC+AGG | - | chr8_2:44947636-44947655 | Msa1249810:intron | 10.0% |
| !! | TGTTTGAAAAAAATAATAAA+CGG | + | chr8_2:44949390-44949409 | None:intergenic | 10.0% |
| !!! | AAAAAAACATTTTAATTCTA+AGG | + | chr8_2:44949839-44949858 | None:intergenic | 10.0% |
| !!! | AAAATTAGAGATTTTTAATT+TGG | + | chr8_2:44950654-44950673 | None:intergenic | 10.0% |
| !!! | TAAACAATTGAATTTTGATT+TGG | + | chr8_2:44945430-44945449 | None:intergenic | 15.0% |
| !! | AAATCAAAATTCAATTGTTT+AGG | - | chr8_2:44945429-44945448 | Msa1249810:intron | 15.0% |
| !! | AACATATTAAAGTTTAAGAA+AGG | - | chr8_2:44945470-44945489 | Msa1249810:intron | 15.0% |
| !!! | GCTAAGTATAATATTTTTAT+TGG | - | chr8_2:44945614-44945633 | Msa1249810:intron | 15.0% |
| !!! | TATTATACTATTTTTTCAAG+AGG | + | chr8_2:44945684-44945703 | None:intergenic | 15.0% |
| !!! | TTTTCGTTTATATTTCATTT+TGG | - | chr8_2:44945813-44945832 | Msa1249810:intron | 15.0% |
| !! | ATGCTTATTTAATTACTAAT+GGG | - | chr8_2:44945945-44945964 | Msa1249810:intron | 15.0% |
| !! | ATGCTTATTTAATTACTAAT+AGG | + | chr8_2:44945945-44945964 | None:intergenic | 15.0% |
| !!! | TAAGTCTATATACAATTTTT+TGG | - | chr8_2:44946923-44946942 | Msa1249810:intron | 15.0% |
| !! | TTCTAAATTAATCTTAAAGT+AGG | + | chr8_2:44947275-44947294 | None:intergenic | 15.0% |
| !!! | AAAAGTATATTTAGATAAAG+AGG | + | chr8_2:44947394-44947413 | None:intergenic | 15.0% |
| !!! | TTTTTTTCAGGAAATTTTTA+AGG | - | chr8_2:44947648-44947667 | Msa1249810:intron | 15.0% |
| !! | ATGGAAAATTTAATAGTAAA+TGG | - | chr8_2:44947928-44947947 | Msa1249810:intron | 15.0% |
| !! | TGGAAAATTTAATAGTAAAT+GGG | - | chr8_2:44947929-44947948 | Msa1249810:intron | 15.0% |
| !!! | GTGAATAATTTATTTTAAAG+AGG | - | chr8_2:44948193-44948212 | Msa1249810:intron | 15.0% |
| !! | TTTCTACCAAAATAAATAAA+GGG | + | chr8_2:44948340-44948359 | None:intergenic | 15.0% |
| !! | ATTTCTACCAAAATAAATAA+AGG | + | chr8_2:44948341-44948360 | None:intergenic | 15.0% |
| !!! | AAGATATGGTAAAAATATTT+TGG | - | chr8_2:44948465-44948484 | Msa1249810:intron | 15.0% |
| !! | TCATGTATATATACATATTT+AGG | - | chr8_2:44948529-44948548 | Msa1249810:intron | 15.0% |
| !!! | TTTCTGTATTTTTTGTTATA+TGG | - | chr8_2:44949254-44949273 | Msa1249810:intron | 15.0% |
| !!! | TGTTATATGGTTTTATAAAA+AGG | - | chr8_2:44949267-44949286 | Msa1249810:intron | 15.0% |
| !!! | GTTATATGGTTTTATAAAAA+GGG | - | chr8_2:44949268-44949287 | Msa1249810:intron | 15.0% |
| !! | TAAACAATACTTATAATTAG+AGG | + | chr8_2:44949322-44949341 | None:intergenic | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | + | chr8_2:44949416-44949435 | None:intergenic | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | + | chr8_2:44949417-44949436 | None:intergenic | 15.0% |
| !!! | AACAACTTTTCTTAATATAA+AGG | - | chr8_2:44949630-44949649 | Msa1249810:intron | 15.0% |
| !! | TTTCTTAATATAAAGGAAAT+TGG | - | chr8_2:44949637-44949656 | Msa1249810:intron | 15.0% |
| !!! | ATTTTTAATAATTCAAGCAT+AGG | + | chr8_2:44949725-44949744 | None:intergenic | 15.0% |
| !!! | ATTGCAAATTTTTTTTTGAA+AGG | + | chr8_2:44950316-44950335 | None:intergenic | 15.0% |
| !!! | TCTCTAATTTTTTAAATATC+AGG | - | chr8_2:44950663-44950682 | Msa1249810:intron | 15.0% |
| !!! | AAAATAATAGTTTTTTTTGC+TGG | - | chr8_2:44950692-44950711 | Msa1249810:intron | 15.0% |
| !! | TGATATAATTCAAACAATAT+AGG | - | chr8_2:44951200-44951219 | Msa1249810:intron | 15.0% |
| !! | ACATATATATTGAGAAAAAT+AGG | + | chr8_2:44951712-44951731 | None:intergenic | 15.0% |
| !! | TCAATATATATGTGAAAATT+TGG | - | chr8_2:44951719-44951738 | Msa1249810:intron | 15.0% |
| !! | GGATTATTTATATCAACAAT+TGG | - | chr8_2:44945635-44945654 | Msa1249810:intron | 20.0% |
| !!! | ATAAATTGACTTTCATTTTG+AGG | - | chr8_2:44945906-44945925 | Msa1249810:intron | 20.0% |
| !! | GATGCTTATTTAATTACTAA+TGG | - | chr8_2:44945944-44945963 | Msa1249810:intron | 20.0% |
| !! | AAGAAAAATTCTTGTAAGTA+TGG | - | chr8_2:44946266-44946285 | Msa1249810:intron | 20.0% |
| !! | AGAAAAATTCTTGTAAGTAT+GGG | - | chr8_2:44946267-44946286 | Msa1249810:intron | 20.0% |
| !! | TCATTTAATCCATAAACAAT+GGG | - | chr8_2:44946319-44946338 | Msa1249810:intron | 20.0% |
| !! | AAATTATACAAACCATAAAG+TGG | + | chr8_2:44946375-44946394 | None:intergenic | 20.0% |
| !! | TTACCTTAAAAATATAAGGT+TGG | - | chr8_2:44946573-44946592 | Msa1249810:intron | 20.0% |
| !!! | TATCCAACCTTATATTTTTA+AGG | + | chr8_2:44946579-44946598 | None:intergenic | 20.0% |
| !!! | CTTTTTTGTAAAGAATATGA+TGG | - | chr8_2:44946600-44946619 | Msa1249810:intron | 20.0% |
| !! | GTATGTAAATCTTCAAAAAA+TGG | + | chr8_2:44947192-44947211 | None:intergenic | 20.0% |
| !!! | CTTTTGTGTAAAATTAATGT+GGG | + | chr8_2:44947323-44947342 | None:intergenic | 20.0% |
| !!! | TCTTTTGTGTAAAATTAATG+TGG | + | chr8_2:44947324-44947343 | None:intergenic | 20.0% |
| !!! | TGTCAATAAAAAAAGCATTT+AGG | + | chr8_2:44947504-44947523 | None:intergenic | 20.0% |
| !!! | TACATGCATTTTCTTTTTTA+AGG | - | chr8_2:44947532-44947551 | Msa1249810:intron | 20.0% |
| !!! | ATTTTCTTTTTTAAGGAACA+TGG | - | chr8_2:44947539-44947558 | Msa1249810:intron | 20.0% |
| !! | TAAGAAGACTAAGTTAATTA+CGG | + | chr8_2:44947853-44947872 | None:intergenic | 20.0% |
| !!! | ACTATTTTCCTAGAAATAAT+TGG | + | chr8_2:44948146-44948165 | None:intergenic | 20.0% |
| !!! | ATTTATTTTAAAGAGGAAAG+TGG | - | chr8_2:44948200-44948219 | Msa1249810:CDS | 20.0% |
| !! | CTTGATCATATAATATCAAT+TGG | - | chr8_2:44948290-44948309 | Msa1249810:CDS | 20.0% |
| !!! | TTGATATTTTCTTCATGAAT+AGG | + | chr8_2:44948425-44948444 | None:intergenic | 20.0% |
| !!! | TATTTTGGTATTTAAGTAGT+TGG | - | chr8_2:44948480-44948499 | Msa1249810:intron | 20.0% |
| !! | TGTATATATACATATTTAGG+TGG | - | chr8_2:44948532-44948551 | Msa1249810:intron | 20.0% |
| !! | ATATAACAATCATCAGTAAT+TGG | + | chr8_2:44948751-44948770 | None:intergenic | 20.0% |
| !! | TACATATTTGTCTTAAAAGT+GGG | + | chr8_2:44949189-44949208 | None:intergenic | 20.0% |
| !! | TTACATATTTGTCTTAAAAG+TGG | + | chr8_2:44949190-44949209 | None:intergenic | 20.0% |
| !! | AAATGATTGATCAAAAAGTT+TGG | + | chr8_2:44949792-44949811 | None:intergenic | 20.0% |
| !!! | AAAATGTTTTTTTTCCAACA+TGG | - | chr8_2:44949846-44949865 | Msa1249810:intron | 20.0% |
| !! | ATCAATTTGGTAAAAACTAA+CGG | + | chr8_2:44949918-44949937 | None:intergenic | 20.0% |
| !!! | TTTTACCAAATTGATCAATT+TGG | - | chr8_2:44949923-44949942 | Msa1249810:intron | 20.0% |
| !!! | TTTTACCAAATTGATCAATT+TGG | + | chr8_2:44949923-44949942 | None:intergenic | 20.0% |
| !! | AATTATAAGTGAACTTATGA+CGG | - | chr8_2:44949962-44949981 | Msa1249810:intron | 20.0% |
| !! | CTTATTGAATTTGTAATCTT+TGG | - | chr8_2:44950001-44950020 | Msa1249810:intron | 20.0% |
| !!! | TCCTTTTTATAAGTAACAAA+TGG | - | chr8_2:44950054-44950073 | Msa1249810:intron | 20.0% |
| !!! | CCTTTTTATAAGTAACAAAT+GGG | - | chr8_2:44950055-44950074 | Msa1249810:intron | 20.0% |
| !! | TCAACAAAAGTTAATGTATT+TGG | - | chr8_2:44950078-44950097 | Msa1249810:intron | 20.0% |
| !! | TATTAGTGGTACATAATTAA+TGG | - | chr8_2:44950290-44950309 | Msa1249810:intron | 20.0% |
| !!! | CTAATTTTTTAAATATCAGG+TGG | - | chr8_2:44950666-44950685 | Msa1249810:intron | 20.0% |
| !! | GTTAAGAGTTTAATAAACTA+AGG | + | chr8_2:44951062-44951081 | None:intergenic | 20.0% |
| !! | AAGTCGATATACATATAAAA+AGG | - | chr8_2:44951110-44951129 | Msa1249810:intron | 20.0% |
| !!! | AAAGACTAATTTGTGTATTT+AGG | + | chr8_2:44951151-44951170 | None:intergenic | 20.0% |
| ! | AGTATTATTTGTATGTGTGT+AGG | + | chr8_2:44945270-44945289 | None:intergenic | 25.0% |
| !! | CGTTTATATTTCATTTTGGA+TGG | - | chr8_2:44945817-44945836 | Msa1249810:intron | 25.0% |
| ! | CTCATTTAATCCATAAACAA+TGG | - | chr8_2:44946318-44946337 | Msa1249810:intron | 25.0% |
| !!! | CTCAATTACTTGTTTTTGTT+AGG | + | chr8_2:44946409-44946428 | None:intergenic | 25.0% |
| ! | CATTTATGAATATGAAGTTG+CGG | + | chr8_2:44946495-44946514 | None:intergenic | 25.0% |
| !!! | TTTATTTTCTGGTCAGTATT+AGG | + | chr8_2:44946668-44946687 | None:intergenic | 25.0% |
| !!! | GTAAAAACCACTTTATTTTC+TGG | + | chr8_2:44946679-44946698 | None:intergenic | 25.0% |
| !!! | ATATAGTTTTGGATCAGTTT+GGG | + | chr8_2:44946701-44946720 | None:intergenic | 25.0% |
| !! | ACAAAACTTTTCTTCAAAGA+GGG | + | chr8_2:44946894-44946913 | None:intergenic | 25.0% |
| ! | GAATATTGCATTATATATGC+AGG | + | chr8_2:44947023-44947042 | None:intergenic | 25.0% |
| !! | TACCAATTGAACTATTTTCA+TGG | - | chr8_2:44947044-44947063 | Msa1249810:intron | 25.0% |
| !! | ACCAATTGAACTATTTTCAT+GGG | - | chr8_2:44947045-44947064 | Msa1249810:intron | 25.0% |
| !! | TTACTAGTTTATCTTTGCAT+AGG | - | chr8_2:44947133-44947152 | Msa1249810:intron | 25.0% |
| !! | TTCAAAAAATGGCTTTTAGA+TGG | + | chr8_2:44947181-44947200 | None:intergenic | 25.0% |
| ! | GTATTAGAGTGAAAATTCAT+AGG | + | chr8_2:44947253-44947272 | None:intergenic | 25.0% |
| ! | GTATATTTAGATAAAGAGGT+GGG | + | chr8_2:44947390-44947409 | None:intergenic | 25.0% |
| ! | AGTATATTTAGATAAAGAGG+TGG | + | chr8_2:44947391-44947410 | None:intergenic | 25.0% |
| ! | TATTTATTTGCCAAGGAATA+AGG | - | chr8_2:44947478-44947497 | Msa1249810:intron | 25.0% |
| !!! | TGCTTTTTTTATTGACAACA+TGG | - | chr8_2:44947507-44947526 | Msa1249810:intron | 25.0% |
| ! | TATATGCTTATTAGTCAACT+TGG | - | chr8_2:44947564-44947583 | Msa1249810:intron | 25.0% |
| ! | TATATGCTTATTAGTCAACT+TGG | - | chr8_2:44947564-44947583 | Msa1249810:intron | 25.0% |
| ! | GCATGTTATGTTATTACATT+CGG | - | chr8_2:44947827-44947846 | Msa1249810:intron | 25.0% |
| ! | CATTCTCTAAACAACAAAAA+TGG | - | chr8_2:44947909-44947928 | Msa1249810:intron | 25.0% |
| !! | CATTTTCATATTAAACGATC+AGG | + | chr8_2:44948100-44948119 | None:intergenic | 25.0% |
| !! | TTATCTGTCCAATTATTTCT+AGG | - | chr8_2:44948135-44948154 | Msa1249810:intron | 25.0% |
| !!! | AGAAGTCCCTTTATTTATTT+TGG | - | chr8_2:44948331-44948350 | Msa1249810:intron | 25.0% |
| !! | TTTTTAACCAAGAGAAGATA+TGG | - | chr8_2:44948451-44948470 | Msa1249810:intron | 25.0% |
| !! | ATTTTTACCATATCTTCTCT+TGG | + | chr8_2:44948461-44948480 | None:intergenic | 25.0% |
| !! | AGGTTGAAAATTTAGAACAT+GGG | + | chr8_2:44948841-44948860 | None:intergenic | 25.0% |
| ! | AACTAATTAACCTTGTCATA+TGG | + | chr8_2:44948906-44948925 | None:intergenic | 25.0% |
| !!! | AATGTATGATGGACAAATTA+AGG | + | chr8_2:44948932-44948951 | None:intergenic | 25.0% |
| ! | TGACATAGTAAAATGTATGA+TGG | + | chr8_2:44948943-44948962 | None:intergenic | 25.0% |
| ! | ATATGCAGTTGTACATTTAA+AGG | - | chr8_2:44949088-44949107 | Msa1249810:intron | 25.0% |
| ! | ACATATTTGTCTTAAAAGTG+GGG | + | chr8_2:44949188-44949207 | None:intergenic | 25.0% |
| !!! | TATGGTTTTATAAAAAGGGA+TGG | - | chr8_2:44949272-44949291 | Msa1249810:intron | 25.0% |
| ! | ACAATACTTATAATTAGAGG+CGG | + | chr8_2:44949319-44949338 | None:intergenic | 25.0% |
| ! | GTATAGGAACTTATACTTTA+AGG | + | chr8_2:44949355-44949374 | None:intergenic | 25.0% |
| ! | GGTTGTAGAGAATTATATTA+AGG | - | chr8_2:44949658-44949677 | Msa1249810:intron | 25.0% |
| ! | GTAGAGAATTATATTAAGGA+CGG | - | chr8_2:44949662-44949681 | Msa1249810:intron | 25.0% |
| ! | ATAATTCAAGCATAGGATTA+TGG | + | chr8_2:44949718-44949737 | None:intergenic | 25.0% |
| ! | AATGATAAGTGAACTTATAG+TGG | + | chr8_2:44949892-44949911 | None:intergenic | 25.0% |
| !! | CCCATTTGTTACTTATAAAA+AGG | + | chr8_2:44950058-44950077 | None:intergenic | 25.0% |
| !!! | TCAACTAAAGTTGATGTATT+TGG | + | chr8_2:44950117-44950136 | None:intergenic | 25.0% |
| !! | CGAATTTGTCTCTTTAAAAA+AGG | - | chr8_2:44950137-44950156 | Msa1249810:intron | 25.0% |
| !! | AGCATCTAATTTTTCATGTT+AGG | - | chr8_2:44950175-44950194 | Msa1249810:intron | 25.0% |
| ! | AATCATAGAGTAAGTTGTAA+AGG | - | chr8_2:44950249-44950268 | Msa1249810:intron | 25.0% |
| !! | ATCATATGTACTTTTGCTTT+TGG | + | chr8_2:44950575-44950594 | None:intergenic | 25.0% |
| !! | TTTTATTGTACAAAAACTCC+TGG | - | chr8_2:44950810-44950829 | Msa1249810:intron | 25.0% |
| !!! | ACAAAGGTAATTATTTTGCA+AGG | + | chr8_2:44950869-44950888 | None:intergenic | 25.0% |
| ! | TTGTCAATTTCAAGATAAAG+AGG | - | chr8_2:44951641-44951660 | Msa1249810:intron | 25.0% |
| ! | TGTCAATTTCAAGATAAAGA+GGG | - | chr8_2:44951642-44951661 | Msa1249810:intron | 25.0% |
| AAATAAAGAAGGAACGGAAA+CGG | + | chr8_2:44945247-44945266 | None:intergenic | 30.0% | |
| TGTAGGAAATAAAGAAGGAA+CGG | + | chr8_2:44945253-44945272 | None:intergenic | 30.0% | |
| ATGTGTGTAGGAAATAAAGA+AGG | + | chr8_2:44945258-44945277 | None:intergenic | 30.0% | |
| TTTCTTCTGAGTTGTATGTT+AGG | - | chr8_2:44945548-44945567 | Msa1249810:intron | 30.0% | |
| !!! | CAACAGTTTTTTCAGTTTTG+AGG | - | chr8_2:44946003-44946022 | Msa1249810:intron | 30.0% |
| ATTACTCAACCCATTGTTTA+TGG | + | chr8_2:44946331-44946350 | None:intergenic | 30.0% | |
| ! | TGATTTGTCAATCCACTTTA+TGG | - | chr8_2:44946360-44946379 | Msa1249810:intron | 30.0% |
| !!! | TTACTTGTTTTTGTTAGGTC+AGG | + | chr8_2:44946404-44946423 | None:intergenic | 30.0% |
| ATACTGACCAGAAAATAAAG+TGG | - | chr8_2:44946669-44946688 | Msa1249810:CDS | 30.0% | |
| !!! | CATATAGTTTTGGATCAGTT+TGG | + | chr8_2:44946702-44946721 | None:intergenic | 30.0% |
| AACTGATCCAAAACTATATG+TGG | - | chr8_2:44946702-44946721 | Msa1249810:CDS | 30.0% | |
| ! | AGAATCACCACATATAGTTT+TGG | + | chr8_2:44946712-44946731 | None:intergenic | 30.0% |
| TTCATACTCTCTCTATTCTA+GGG | + | chr8_2:44946818-44946837 | None:intergenic | 30.0% | |
| ATTCATACTCTCTCTATTCT+AGG | + | chr8_2:44946819-44946838 | None:intergenic | 30.0% | |
| ! | GACAAAACTTTTCTTCAAAG+AGG | + | chr8_2:44946895-44946914 | None:intergenic | 30.0% |
| TCCCATGAAAATAGTTCAAT+TGG | + | chr8_2:44947049-44947068 | None:intergenic | 30.0% | |
| GTGATTATAAAAATAGACCG+AGG | - | chr8_2:44947443-44947462 | Msa1249810:intron | 30.0% | |
| AAATAAAACCTCTACTTCCT+CGG | + | chr8_2:44947463-44947482 | None:intergenic | 30.0% | |
| !!! | GAGGTTTTATTTATTTGCCA+AGG | - | chr8_2:44947471-44947490 | Msa1249810:intron | 30.0% |
| !! | CAGGAAATTTTTAAGGAACA+TGG | - | chr8_2:44947655-44947674 | Msa1249810:intron | 30.0% |
| GAAGAGACAAATACTTTAAG+TGG | - | chr8_2:44947951-44947970 | Msa1249810:intron | 30.0% | |
| AAGGGACTTCTACTTTATAA+AGG | + | chr8_2:44948322-44948341 | None:intergenic | 30.0% | |
| ATATTTGATATCATAGAGCG+AGG | + | chr8_2:44948637-44948656 | None:intergenic | 30.0% | |
| ! | GAAAATTTAGAACATGGGAT+GGG | + | chr8_2:44948836-44948855 | None:intergenic | 30.0% |
| ! | TGAAAATTTAGAACATGGGA+TGG | + | chr8_2:44948837-44948856 | None:intergenic | 30.0% |
| ! | CAGGTTGAAAATTTAGAACA+TGG | + | chr8_2:44948842-44948861 | None:intergenic | 30.0% |
| !! | CATGTTCTAAATTTTCAACC+TGG | - | chr8_2:44948840-44948859 | Msa1249810:intron | 30.0% |
| TAATTAACCTTGTCATATGG+TGG | + | chr8_2:44948903-44948922 | None:intergenic | 30.0% | |
| ATATGCATGTGAAAACTACT+AGG | - | chr8_2:44949116-44949135 | Msa1249810:intron | 30.0% | |
| ! | GTTTTATAAAAAGGGATGGA+GGG | - | chr8_2:44949276-44949295 | Msa1249810:intron | 30.0% |
| ! | ACGGACTAAGTAATTTGTAT+AGG | + | chr8_2:44949371-44949390 | None:intergenic | 30.0% |
| AGAATTATATTAAGGACGGA+GGG | - | chr8_2:44949666-44949685 | Msa1249810:intron | 30.0% | |
| TTACTTATAAAAAGGACCAG+AGG | + | chr8_2:44950050-44950069 | None:intergenic | 30.0% | |
| ! | TTGTCTCTTTAAAAAAGGAC+CGG | - | chr8_2:44950142-44950161 | Msa1249810:intron | 30.0% |
| ACTTACTCTATGATTCTGAA+TGG | + | chr8_2:44950244-44950263 | None:intergenic | 30.0% | |
| AGAGTAAGTTGTAAAGGATA+AGG | - | chr8_2:44950255-44950274 | Msa1249810:intron | 30.0% | |
| TGTAAAGGATAAGGAGAAAT+TGG | - | chr8_2:44950264-44950283 | Msa1249810:intron | 30.0% | |
| TTTAGCATAACAACAGCAAA+GGG | + | chr8_2:44950339-44950358 | None:intergenic | 30.0% | |
| !! | TTTGCTGTTGTTATGCTAAA+GGG | - | chr8_2:44950339-44950358 | Msa1249810:intron | 30.0% |
| ! | ACCATTTTGTGACAACTTTT+CGG | - | chr8_2:44950733-44950752 | Msa1249810:intron | 30.0% |
| !! | CCTTTTTCACAAAAAAATCC+AGG | + | chr8_2:44950831-44950850 | None:intergenic | 30.0% |
| !!! | CCTGGATTTTTTTGTGAAAA+AGG | - | chr8_2:44950828-44950847 | Msa1249810:intron | 30.0% |
| ACTTTGCTGGATTACAAATT+TGG | + | chr8_2:44950927-44950946 | None:intergenic | 30.0% | |
| ! | TTTGCATGCTTCTTTAACTT+TGG | + | chr8_2:44950950-44950969 | None:intergenic | 30.0% |
| ! | ATTTGTTAGAACAACTATGG+TGG | + | chr8_2:44951427-44951446 | None:intergenic | 30.0% |
| !! | CCAATTTGTTAGAACAACTA+TGG | + | chr8_2:44951430-44951449 | None:intergenic | 30.0% |
| CCATAGTTGTTCTAACAAAT+TGG | - | chr8_2:44951427-44951446 | Msa1249810:intron | 30.0% | |
| TGTTAGAACTCACAAATTCA+GGG | - | chr8_2:44951471-44951490 | Msa1249810:intron | 30.0% | |
| AATTGAGATGAGAATGCATT+GGG | + | chr8_2:44951541-44951560 | None:intergenic | 30.0% | |
| ATTCTCATCTCAATTCTTGA+TGG | - | chr8_2:44951546-44951565 | Msa1249810:intron | 30.0% | |
| ! | AATTCTTGATGGCAAGAATT+GGG | - | chr8_2:44951557-44951576 | Msa1249810:intron | 30.0% |
| AAAGAGATGAAAGCTCTATT+TGG | - | chr8_2:44951592-44951611 | Msa1249810:intron | 30.0% | |
| TTTCAAGATACTCGTAGTAA+TGG | - | chr8_2:44951616-44951635 | Msa1249810:intron | 30.0% | |
| ! | CTTGGTGATTGCAATTTATA+TGG | - | chr8_2:44951674-44951693 | Msa1249810:intron | 30.0% |
| CTTCAATACAAGATTGACTA+AGG | + | chr8_2:44951748-44951767 | None:intergenic | 30.0% | |
| TTTATCCCTTTCTTCAATAC+AGG | - | chr8_2:44951775-44951794 | Msa1249810:intron | 30.0% | |
| ! | AAGAAAACGATTGCTTTGAA+AGG | - | chr8_2:44951860-44951879 | Msa1249810:intron | 30.0% |
| ! | TGCACATTACGATTTTGTTA+AGG | - | chr8_2:44951883-44951902 | Msa1249810:intron | 30.0% |
| ! | GCACATTACGATTTTGTTAA+GGG | - | chr8_2:44951884-44951903 | Msa1249810:intron | 30.0% |
| !!! | TTTTTCAGTTTTGAGGCTAG+AGG | - | chr8_2:44946010-44946029 | Msa1249810:intron | 35.0% |
| CTTGTAAGTATGGGTGTATA+TGG | - | chr8_2:44946276-44946295 | Msa1249810:intron | 35.0% | |
| AAGTATGGGTGTATATGGTT+TGG | - | chr8_2:44946281-44946300 | Msa1249810:intron | 35.0% | |
| AGTATGGGTGTATATGGTTT+GGG | - | chr8_2:44946282-44946301 | Msa1249810:intron | 35.0% | |
| ACATCACCCCAAATCATATA+GGG | + | chr8_2:44946758-44946777 | None:intergenic | 35.0% | |
| AACATCACCCCAAATCATAT+AGG | + | chr8_2:44946759-44946778 | None:intergenic | 35.0% | |
| TGAGTGAATTTCTACTCACT+AGG | + | chr8_2:44946958-44946977 | None:intergenic | 35.0% | |
| GAGTAGAAATTCACTCATCA+AGG | - | chr8_2:44946961-44946980 | Msa1249810:intron | 35.0% | |
| ACTCATCAAGGTGAATAAGT+GGG | - | chr8_2:44946973-44946992 | Msa1249810:intron | 35.0% | |
| TGCATTATATATGCAGGAGA+TGG | + | chr8_2:44947017-44947036 | None:intergenic | 35.0% | |
| GTGAAAATTCATAGGAGAAG+TGG | + | chr8_2:44947245-44947264 | None:intergenic | 35.0% | |
| ! | AGGAAAAAACCAGAAGTGTA+TGG | - | chr8_2:44947772-44947791 | Msa1249810:intron | 35.0% |
| AACATAACATGCTGACCTTT+GGG | + | chr8_2:44947819-44947838 | None:intergenic | 35.0% | |
| TAACATAACATGCTGACCTT+TGG | + | chr8_2:44947820-44947839 | None:intergenic | 35.0% | |
| TAGTCTTCTTAATTCCCCAT+TGG | - | chr8_2:44947862-44947881 | Msa1249810:intron | 35.0% | |
| AGTCTTCTTAATTCCCCATT+GGG | - | chr8_2:44947863-44947882 | Msa1249810:intron | 35.0% | |
| ! | CATTATGTGTCACTAAACAC+TGG | - | chr8_2:44948374-44948393 | Msa1249810:intron | 35.0% |
| !! | TGTGAGAATAAGAAGCATTG+TGG | - | chr8_2:44948605-44948624 | Msa1249810:intron | 35.0% |
| !! | GTGAGAATAAGAAGCATTGT+GGG | - | chr8_2:44948606-44948625 | Msa1249810:intron | 35.0% |
| AAAACCAGAAACTGCAAGTT+GGG | + | chr8_2:44948789-44948808 | None:intergenic | 35.0% | |
| CTCTGCAGTTATTAACAGAA+AGG | + | chr8_2:44949038-44949057 | None:intergenic | 35.0% | |
| !! | GGTTTTATAAAAAGGGATGG+AGG | - | chr8_2:44949275-44949294 | Msa1249810:intron | 35.0% |
| TACTTATAATTAGAGGCGGA+GGG | + | chr8_2:44949315-44949334 | None:intergenic | 35.0% | |
| ATACTTATAATTAGAGGCGG+AGG | + | chr8_2:44949316-44949335 | None:intergenic | 35.0% | |
| GAGAATTATATTAAGGACGG+AGG | - | chr8_2:44949665-44949684 | Msa1249810:intron | 35.0% | |
| CTAAAGTTCATCTTCCATGT+TGG | + | chr8_2:44949863-44949882 | None:intergenic | 35.0% | |
| TTAGATGCTTATATTCCCTC+CGG | + | chr8_2:44950164-44950183 | None:intergenic | 35.0% | |
| ACTCTATGATTCTGAATGGA+AGG | + | chr8_2:44950240-44950259 | None:intergenic | 35.0% | |
| GGAGAAATTGGTTGTATTAG+TGG | - | chr8_2:44950276-44950295 | Msa1249810:intron | 35.0% | |
| CTTTAGCATAACAACAGCAA+AGG | + | chr8_2:44950340-44950359 | None:intergenic | 35.0% | |
| !! | CTTTGCTGTTGTTATGCTAA+AGG | - | chr8_2:44950338-44950357 | Msa1249810:intron | 35.0% |
| GTGGAGAATATTGTGGTTAT+TGG | - | chr8_2:44950374-44950393 | Msa1249810:intron | 35.0% | |
| TATAGACTTATACCTTGCAG+TGG | + | chr8_2:44950453-44950472 | None:intergenic | 35.0% | |
| TTCAGAACTTCCAGTTAACT+TGG | - | chr8_2:44950624-44950643 | Msa1249810:intron | 35.0% | |
| ATTTGGATCACCAAGTTAAC+TGG | + | chr8_2:44950637-44950656 | None:intergenic | 35.0% | |
| ! | CCATTTTGTGACAACTTTTC+GGG | - | chr8_2:44950734-44950753 | Msa1249810:intron | 35.0% |
| AAATATCATCCACTAGTCAC+TGG | - | chr8_2:44950767-44950786 | Msa1249810:intron | 35.0% | |
| CACTGTATGATCATAGACAA+AGG | + | chr8_2:44950885-44950904 | None:intergenic | 35.0% | |
| ! | TCTTTAACTTTGGACTTTGC+TGG | + | chr8_2:44950940-44950959 | None:intergenic | 35.0% |
| CTTAAACTAGAGAGTGATGT+GGG | + | chr8_2:44951021-44951040 | None:intergenic | 35.0% | |
| CACAAGACTCTTTATAGCTA+AGG | + | chr8_2:44951287-44951306 | None:intergenic | 35.0% | |
| ! | TGCATAGTTTTCCTCTTTCT+TGG | - | chr8_2:44951384-44951403 | Msa1249810:intron | 35.0% |
| GTGTTAGAACTCACAAATTC+AGG | - | chr8_2:44951470-44951489 | Msa1249810:intron | 35.0% | |
| ATTGAGATGAGAATGCATTG+GGG | + | chr8_2:44951540-44951559 | None:intergenic | 35.0% | |
| GAATTGAGATGAGAATGCAT+TGG | + | chr8_2:44951542-44951561 | None:intergenic | 35.0% | |
| ! | CAATTCTTGATGGCAAGAAT+TGG | - | chr8_2:44951556-44951575 | Msa1249810:intron | 35.0% |
| ! | ATTCTTGATGGCAAGAATTG+GGG | - | chr8_2:44951558-44951577 | Msa1249810:intron | 35.0% |
| ! | TAAAGAGGGACTATTTTGCT+TGG | - | chr8_2:44951656-44951675 | Msa1249810:intron | 35.0% |
| AGCTTCCTGTATTGAAGAAA+GGG | + | chr8_2:44951783-44951802 | None:intergenic | 35.0% | |
| ACAACAGCATCTCTTACAAA+TGG | + | chr8_2:44951839-44951858 | None:intergenic | 35.0% | |
| CATAAACGCATCACATCATG+AGG | + | chr8_2:44946095-44946114 | None:intergenic | 40.0% | |
| AAAGATCAAGCAGTTGACGA+CGG | - | chr8_2:44946172-44946191 | Msa1249810:CDS | 40.0% | |
| CACTTCGAATTCTTTCATCC+GGG | + | chr8_2:44946228-44946247 | None:intergenic | 40.0% | |
| CCACTTCGAATTCTTTCATC+CGG | + | chr8_2:44946229-44946248 | None:intergenic | 40.0% | |
| CGGATGAAAGAATTCGAAGT+GGG | - | chr8_2:44946227-44946246 | Msa1249810:intron | 40.0% | |
| CATATAGGGAACCCCAATTT+GGG | + | chr8_2:44946744-44946763 | None:intergenic | 40.0% | |
| TCATATAGGGAACCCCAATT+TGG | + | chr8_2:44946745-44946764 | None:intergenic | 40.0% | |
| TTGGGGTTCCCTATATGATT+TGG | - | chr8_2:44946747-44946766 | Msa1249810:intron | 40.0% | |
| TGGGGTTCCCTATATGATTT+GGG | - | chr8_2:44946748-44946767 | Msa1249810:intron | 40.0% | |
| ! | TTCTAGGGATGTACATGAGT+CGG | + | chr8_2:44946803-44946822 | None:intergenic | 40.0% |
| CACTCATCAAGGTGAATAAG+TGG | - | chr8_2:44946972-44946991 | Msa1249810:intron | 40.0% | |
| CTCATCAAGGTGAATAAGTG+GGG | - | chr8_2:44946974-44946993 | Msa1249810:intron | 40.0% | |
| AAAATAGACCGAGGAAGTAG+AGG | - | chr8_2:44947452-44947471 | Msa1249810:intron | 40.0% | |
| !! | AGCATTTAGGCCTTATTCCT+TGG | + | chr8_2:44947491-44947510 | None:intergenic | 40.0% |
| CGTATGGTTGACAAAAGAAG+GGG | + | chr8_2:44948043-44948062 | None:intergenic | 40.0% | |
| GCGTATGGTTGACAAAAGAA+GGG | + | chr8_2:44948044-44948063 | None:intergenic | 40.0% | |
| TGCGTATGGTTGACAAAAGA+AGG | + | chr8_2:44948045-44948064 | None:intergenic | 40.0% | |
| ACGCTAACAAGTGCTCTTAA+AGG | + | chr8_2:44948506-44948525 | None:intergenic | 40.0% | |
| GATTGCAGGACAACTTAGTT+GGG | - | chr8_2:44948691-44948710 | Msa1249810:intron | 40.0% | |
| ! | ATTAGCCTCTAGTGATGCTT+TGG | - | chr8_2:44948718-44948737 | Msa1249810:intron | 40.0% |
| ! | TTTAGCCAAAGCATCACTAG+AGG | + | chr8_2:44948726-44948745 | None:intergenic | 40.0% |
| GAAAACCAGAAACTGCAAGT+TGG | + | chr8_2:44948790-44948809 | None:intergenic | 40.0% | |
| GAACCATGTTGGCAATGTTA+CGG | + | chr8_2:44948881-44948900 | None:intergenic | 40.0% | |
| TAACTGCAGAGCAAGTATTC+AGG | - | chr8_2:44949047-44949066 | Msa1249810:intron | 40.0% | |
| AGAGCAAGTATTCAGGAACT+GGG | - | chr8_2:44949054-44949073 | Msa1249810:intron | 40.0% | |
| TGGGGATATGCAAGAGAAAA+GGG | + | chr8_2:44949170-44949189 | None:intergenic | 40.0% | |
| CCTCATGACAACAAACATGA+TGG | + | chr8_2:44949756-44949775 | None:intergenic | 40.0% | |
| !! | CCATCATGTTTGTTGTCATG+AGG | - | chr8_2:44949753-44949772 | Msa1249810:intron | 40.0% |
| GTAACGAAGTATACTTCCTC+TGG | - | chr8_2:44950031-44950050 | Msa1249810:intron | 40.0% | |
| ! | TCTCTTTAAAAAAGGACCGG+AGG | - | chr8_2:44950145-44950164 | Msa1249810:intron | 40.0% |
| ! | CTCTTTAAAAAAGGACCGGA+GGG | - | chr8_2:44950146-44950165 | Msa1249810:intron | 40.0% |
| ! | ATTCTGAATGGAAGGTGTGA+GGG | + | chr8_2:44950232-44950251 | None:intergenic | 40.0% |
| TGCTAAAGGGAATGTGTTAC+AGG | - | chr8_2:44950352-44950371 | Msa1249810:intron | 40.0% | |
| TAAAGGGAATGTGTTACAGG+TGG | - | chr8_2:44950355-44950374 | Msa1249810:intron | 40.0% | |
| GTTACAGGTGGAGAATATTG+TGG | - | chr8_2:44950367-44950386 | Msa1249810:intron | 40.0% | |
| ! | AGTTGCTGTGGAGGTATAAA+GGG | - | chr8_2:44950401-44950420 | Msa1249810:intron | 40.0% |
| TAATGTCCATCCCAGATGAT+GGG | - | chr8_2:44950426-44950445 | Msa1249810:intron | 40.0% | |
| CCCGAAAAGTTGTCACAAAA+TGG | + | chr8_2:44950737-44950756 | None:intergenic | 40.0% | |
| TATACTTGCCTTCTCCAAGT+TGG | + | chr8_2:44950995-44951014 | None:intergenic | 40.0% | |
| GCTTAAACTAGAGAGTGATG+TGG | + | chr8_2:44951022-44951041 | None:intergenic | 40.0% | |
| TGGCAAGAATTGGGGAAAAA+TGG | - | chr8_2:44951566-44951585 | Msa1249810:intron | 40.0% | |
| CAGCTTCCTGTATTGAAGAA+AGG | + | chr8_2:44951784-44951803 | None:intergenic | 40.0% | |
| GAAGCTGTTAATGTCTCTCT+GGG | - | chr8_2:44951797-44951816 | Msa1249810:intron | 40.0% | |
| AAGCTGTTAATGTCTCTCTG+GGG | - | chr8_2:44951798-44951817 | Msa1249810:intron | 40.0% | |
| ! | TTAAGGGAGCTTTTGAACTG+TGG | - | chr8_2:44951900-44951919 | Msa1249810:CDS | 40.0% |
| ! | TAAGGGAGCTTTTGAACTGT+GGG | - | chr8_2:44951901-44951920 | Msa1249810:CDS | 40.0% |
| AAGCTTCGTCAACTCTGCTA+TGG | + | chr8_2:44945189-44945208 | None:intergenic | 45.0% | |
| CAGAGTTGACGAAGCTTCTA+AGG | - | chr8_2:44945192-44945211 | Msa1249810:CDS | 45.0% | |
| TAAAGAAGGAACGGAAACGG+TGG | + | chr8_2:44945244-44945263 | None:intergenic | 45.0% | |
| CACTTCAATCGATGAGATGC+AGG | + | chr8_2:44945514-44945533 | None:intergenic | 45.0% | |
| !!! | TCAGTTTTGAGGCTAGAGGT+AGG | - | chr8_2:44946014-44946033 | Msa1249810:intron | 45.0% |
| !!! | TTTTGAGGCTAGAGGTAGGT+AGG | - | chr8_2:44946018-44946037 | Msa1249810:intron | 45.0% |
| CGTCAACTGCTTGATCTTTG+CGG | + | chr8_2:44946171-44946190 | None:intergenic | 45.0% | |
| CCGGATGAAAGAATTCGAAG+TGG | - | chr8_2:44946226-44946245 | Msa1249810:intron | 45.0% | |
| TTCTCGCACCAAACCCAAAT+TGG | - | chr8_2:44946728-44946747 | Msa1249810:intron | 45.0% | |
| TCTCGCACCAAACCCAAATT+GGG | - | chr8_2:44946729-44946748 | Msa1249810:intron | 45.0% | |
| GGGGTTCCCTATATGATTTG+GGG | - | chr8_2:44946749-44946768 | Msa1249810:intron | 45.0% | |
| TCTAGGGATGTACATGAGTC+GGG | + | chr8_2:44946802-44946821 | None:intergenic | 45.0% | |
| GCAAGTTCACCATACACTTC+TGG | + | chr8_2:44947784-44947803 | None:intergenic | 45.0% | |
| GTGTATGGTGAACTTGCCAA+AGG | - | chr8_2:44947787-44947806 | Msa1249810:intron | 45.0% | |
| ACCAGATAGATAGCCCAATG+GGG | + | chr8_2:44947879-44947898 | None:intergenic | 45.0% | |
| CACCAGATAGATAGCCCAAT+GGG | + | chr8_2:44947880-44947899 | None:intergenic | 45.0% | |
| CATTGGGCTATCTATCTGGT+GGG | - | chr8_2:44947879-44947898 | Msa1249810:intron | 45.0% | |
| TAACAGTCTGCACATGCGTA+TGG | + | chr8_2:44948059-44948078 | None:intergenic | 45.0% | |
| CTAAGTTGTCCTGCAATCGT+AGG | + | chr8_2:44948689-44948708 | None:intergenic | 45.0% | |
| CGATTGCAGGACAACTTAGT+TGG | - | chr8_2:44948690-44948709 | Msa1249810:intron | 45.0% | |
| ACTTCCCAACTTGCAGTTTC+TGG | - | chr8_2:44948782-44948801 | Msa1249810:intron | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | + | chr8_2:44948892-44948911 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | - | chr8_2:44948893-44948912 | Msa1249810:intron | 45.0% | |
| CAGAGCAAGTATTCAGGAAC+TGG | - | chr8_2:44949053-44949072 | Msa1249810:intron | 45.0% | |
| GAGCAAGTATTCAGGAACTG+GGG | - | chr8_2:44949055-44949074 | Msa1249810:intron | 45.0% | |
| GTGGGGATATGCAAGAGAAA+AGG | + | chr8_2:44949171-44949190 | None:intergenic | 45.0% | |
| ! | GATTCTGAATGGAAGGTGTG+AGG | + | chr8_2:44950233-44950252 | None:intergenic | 45.0% |
| GTTATTGGACACAGTTGCTG+TGG | - | chr8_2:44950389-44950408 | Msa1249810:intron | 45.0% | |
| ! | CAGTTGCTGTGGAGGTATAA+AGG | - | chr8_2:44950400-44950419 | Msa1249810:intron | 45.0% |
| CTAATGTCCATCCCAGATGA+TGG | - | chr8_2:44950425-44950444 | Msa1249810:intron | 45.0% | |
| CCAACAAATCCAGTGACTAG+TGG | + | chr8_2:44950779-44950798 | None:intergenic | 45.0% | |
| CCACTAGTCACTGGATTTGT+TGG | - | chr8_2:44950776-44950795 | Msa1249810:intron | 45.0% | |
| ACAGTGACTTCATAGAGCAG+TGG | - | chr8_2:44950899-44950918 | Msa1249810:CDS | 45.0% | |
| CAGTGACTTCATAGAGCAGT+GGG | - | chr8_2:44950900-44950919 | Msa1249810:CDS | 45.0% | |
| TTGCTTGCACACCAAGAAAG+AGG | + | chr8_2:44951398-44951417 | None:intergenic | 45.0% | |
| GCAACGATGACTCATAGCAA+TGG | - | chr8_2:44951511-44951530 | Msa1249810:intron | 45.0% | |
| GGAAGCTGTTAATGTCTCTC+TGG | - | chr8_2:44951796-44951815 | Msa1249810:intron | 45.0% | |
| !!! | TAAGAATAATTTTTTTTATA+GGG | + | chr8_2:44945321-44945340 | None:intergenic | 5.0% |
| !!! | TAAAAATTATTAAACTATTT+TGG | - | chr8_2:44950594-44950613 | Msa1249810:intron | 5.0% |
| GTAGGTAGGTTGCTGGCAAT+AGG | - | chr8_2:44946032-44946051 | Msa1249810:intron | 50.0% | |
| GTAGGTTGCTGGCAATAGGT+AGG | - | chr8_2:44946036-44946055 | Msa1249810:intron | 50.0% | |
| GTGGGACCATTGACAGGTTA+GGG | + | chr8_2:44946062-44946081 | None:intergenic | 50.0% | |
| TGTGGGACCATTGACAGGTT+AGG | + | chr8_2:44946063-44946082 | None:intergenic | 50.0% | |
| !! | TCATGAGGACTGGTCTGTGT+GGG | + | chr8_2:44946080-44946099 | None:intergenic | 50.0% |
| !! | ATCATGAGGACTGGTCTGTG+TGG | + | chr8_2:44946081-44946100 | None:intergenic | 50.0% |
| ACGCATCACATCATGAGGAC+TGG | + | chr8_2:44946090-44946109 | None:intergenic | 50.0% | |
| CAACTGCTTGATCTTTGCGG+CGG | + | chr8_2:44946168-44946187 | None:intergenic | 50.0% | |
| CTCGCACCAAACCCAAATTG+GGG | - | chr8_2:44946730-44946749 | Msa1249810:intron | 50.0% | |
| ! | AGGGAACCCCAATTTGGGTT+TGG | + | chr8_2:44946739-44946758 | None:intergenic | 50.0% |
| TCCCCATTGGGCTATCTATC+TGG | - | chr8_2:44947875-44947894 | Msa1249810:intron | 50.0% | |
| CCACCAGATAGATAGCCCAA+TGG | + | chr8_2:44947881-44947900 | None:intergenic | 50.0% | |
| CCATTGGGCTATCTATCTGG+TGG | - | chr8_2:44947878-44947897 | Msa1249810:intron | 50.0% | |
| TCAACCTGGTGAAGCCTTTG+TGG | - | chr8_2:44948854-44948873 | Msa1249810:intron | 50.0% | |
| GGCAATGTTACGGACCACAA+AGG | + | chr8_2:44948871-44948890 | None:intergenic | 50.0% | |
| GGTCCGTAACATTGCCAACA+TGG | - | chr8_2:44948875-44948894 | Msa1249810:intron | 50.0% | |
| ATTGGACACAGTTGCTGTGG+AGG | - | chr8_2:44950392-44950411 | Msa1249810:intron | 50.0% | |
| TTGCAGTGGTCCCATCATCT+GGG | + | chr8_2:44950439-44950458 | None:intergenic | 50.0% | |
| CTCTGAGCAGTGTACCAACT+TGG | - | chr8_2:44950978-44950997 | Msa1249810:intron | 50.0% | |
| GCAGTGTACCAACTTGGAGA+AGG | - | chr8_2:44950984-44951003 | Msa1249810:intron | 50.0% | |
| CATGGCAGGAGAGTCTTACG+AGG | - | chr8_2:44945160-44945179 | Msa1249810:CDS | 55.0% | |
| GCTAGAGGTAGGTAGGTTGC+TGG | - | chr8_2:44946025-44946044 | Msa1249810:intron | 55.0% | |
| GGTAGGCCCTAACCTGTCAA+TGG | - | chr8_2:44946053-44946072 | Msa1249810:intron | 55.0% | |
| GTCTGTGTGGGACCATTGAC+AGG | + | chr8_2:44946068-44946087 | None:intergenic | 55.0% | |
| TGCAGCGAGAAAGCTGACCT+CGG | - | chr8_2:44946134-44946153 | Msa1249810:intron | 55.0% | |
| CGGGTCAAAACTATCCGACC+CGG | + | chr8_2:44946209-44946228 | None:intergenic | 55.0% | |
| !!! | CGGGTCGGATAGTTTTGACC+CGG | - | chr8_2:44946207-44946226 | Msa1249810:intron | 55.0% |
| ACATGCTGACCTTTGGGCTC+TGG | + | chr8_2:44947813-44947832 | None:intergenic | 55.0% | |
| GCAATCGTAGGCGTGTAGCT+CGG | + | chr8_2:44948677-44948696 | None:intergenic | 55.0% | |
| AGCTACACGCCTACGATTGC+AGG | - | chr8_2:44948677-44948696 | Msa1249810:intron | 55.0% | |
| AGTGGTCCCATCATCTGGGA+TGG | + | chr8_2:44950435-44950454 | None:intergenic | 55.0% | |
| CTTGCAGTGGTCCCATCATC+TGG | + | chr8_2:44950440-44950459 | None:intergenic | 55.0% | |
| !! | CAGATGATGGGACCACTGCA+AGG | - | chr8_2:44950438-44950457 | Msa1249810:intron | 55.0% |
| GGCAGGAGAGTCTTACGAGG+AGG | - | chr8_2:44945163-44945182 | Msa1249810:CDS | 60.0% | |
| TTGCGGCGGCAACATATCCG+AGG | + | chr8_2:44946154-44946173 | None:intergenic | 60.0% | |
| CAAGCAGTTGACGACGGAGC+TGG | - | chr8_2:44946178-44946197 | Msa1249810:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCAA+AGG | - | chr8_2:44947801-44947820 | Msa1249810:intron | 60.0% | |
| ! | GACCTTTGGGCTCTGGCCTT+TGG | + | chr8_2:44947806-44947825 | None:intergenic | 60.0% |
| CGGACCACAAAGGCTTCACC+AGG | + | chr8_2:44948861-44948880 | None:intergenic | 60.0% | |
| GACGACGGAGCTGGTTGCGC+CGG | - | chr8_2:44946187-44946206 | Msa1249810:CDS | 70.0% | |
| ACGACGGAGCTGGTTGCGCC+GGG | - | chr8_2:44946188-44946207 | Msa1249810:CDS | 70.0% | |
| CGGAGCTGGTTGCGCCGGGT+CGG | - | chr8_2:44946192-44946211 | Msa1249810:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 44945152 | 44951961 | 44945152 | ID=Msa1249810;Name=Msa1249810 |
| chr8_2 | mRNA | 44945152 | 44951961 | 44945152 | ID=Msa1249810-mRNA-1;Parent=Msa1249810;Name=Msa1249810-mRNA-1;_AED=0.30;_eAED=0.37;_QI=0|0.42|0.25|0.87|0.85|0.87|8|0|241 |
| chr8_2 | exon | 44951900 | 44951961 | 44951900 | ID=Msa1249810-mRNA-1:exon:13609;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44950831 | 44950974 | 44950831 | ID=Msa1249810-mRNA-1:exon:13608;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44949291 | 44949339 | 44949291 | ID=Msa1249810-mRNA-1:exon:13607;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44948199 | 44948315 | 44948199 | ID=Msa1249810-mRNA-1:exon:13606;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44948004 | 44948057 | 44948004 | ID=Msa1249810-mRNA-1:exon:13605;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44946654 | 44946739 | 44946654 | ID=Msa1249810-mRNA-1:exon:13604;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44946162 | 44946210 | 44946162 | ID=Msa1249810-mRNA-1:exon:13603;Parent=Msa1249810-mRNA-1 |
| chr8_2 | exon | 44945152 | 44945316 | 44945152 | ID=Msa1249810-mRNA-1:exon:13602;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44951900 | 44951961 | 44951900 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44950831 | 44950974 | 44950831 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44949291 | 44949339 | 44949291 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44948199 | 44948315 | 44948199 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44948004 | 44948057 | 44948004 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44946654 | 44946739 | 44946654 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44946162 | 44946210 | 44946162 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| chr8_2 | CDS | 44945152 | 44945316 | 44945152 | ID=Msa1249810-mRNA-1:cds;Parent=Msa1249810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
