Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249780 | XP_013445985.1 | 91.968 | 249 | 9 | 1 | 23 | 271 | 18 | 255 | 2.64e-165 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249780 | sp|P27141|CAHC_TOBAC | 66.800 | 250 | 70 | 3 | 23 | 270 | 82 | 320 | 4.30e-117 | 341 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249780 | A0A072TRI7 | 91.968 | 249 | 9 | 1 | 23 | 271 | 18 | 255 | 1.26e-165 | 468 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0102920 | Msa1249780 | 0.802062 | 6.705108e-49 | -8.615850e-47 |
| Msa0768670 | Msa1249780 | 0.803715 | 3.054745e-49 | -8.615850e-47 |
| Msa0147680 | Msa1249780 | 0.803337 | 3.658152e-49 | -8.615850e-47 |
| Msa1249780 | Msa1249810 | 0.803569 | 3.274135e-49 | -8.615850e-47 |
| Msa0987640 | Msa1249780 | 0.803658 | 3.138460e-49 | -8.615850e-47 |
| Msa1021620 | Msa1249780 | 0.800552 | 1.366376e-48 | -8.615850e-47 |
| Msa1193670 | Msa1249780 | 0.889536 | 2.219612e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249780 | MtrunA17_Chr8g0365441 | 91.968 | 249 | 9 | 1 | 23 | 271 | 18 | 255 | 2.43e-169 | 468 |
| Msa1249780 | MtrunA17_Chr5g0413551 | 77.419 | 248 | 44 | 2 | 24 | 270 | 19 | 255 | 5.01e-142 | 399 |
| Msa1249780 | MtrunA17_Chr6g0450641 | 62.055 | 253 | 79 | 3 | 24 | 270 | 89 | 330 | 4.05e-109 | 318 |
| Msa1249780 | MtrunA17_Chr3g0117661 | 51.301 | 269 | 114 | 4 | 4 | 270 | 3 | 256 | 2.41e-86 | 258 |
| Msa1249780 | MtrunA17_Chr3g0117691 | 49.814 | 269 | 118 | 4 | 4 | 270 | 3 | 256 | 4.50e-83 | 249 |
| Msa1249780 | MtrunA17_Chr2g0279581 | 46.890 | 209 | 96 | 4 | 57 | 264 | 89 | 283 | 6.96e-63 | 199 |
| Msa1249780 | MtrunA17_Chr5g0427341 | 45.455 | 209 | 100 | 4 | 57 | 264 | 94 | 289 | 9.10e-56 | 181 |
| Msa1249780 | MtrunA17_Chr3g0117671 | 70.455 | 44 | 13 | 0 | 88 | 131 | 1 | 44 | 8.34e-17 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249780 | AT5G14740.9 | 66.935 | 248 | 67 | 3 | 24 | 267 | 19 | 255 | 1.60e-115 | 332 |
| Msa1249780 | AT5G14740.8 | 66.935 | 248 | 67 | 3 | 24 | 267 | 19 | 255 | 1.60e-115 | 332 |
| Msa1249780 | AT5G14740.7 | 66.935 | 248 | 67 | 3 | 24 | 267 | 19 | 255 | 1.60e-115 | 332 |
| Msa1249780 | AT5G14740.2 | 66.935 | 248 | 67 | 3 | 24 | 267 | 19 | 255 | 1.60e-115 | 332 |
| Msa1249780 | AT5G14740.6 | 66.935 | 248 | 67 | 3 | 24 | 267 | 19 | 255 | 1.60e-115 | 332 |
| Msa1249780 | AT1G70410.3 | 63.281 | 256 | 81 | 3 | 18 | 271 | 13 | 257 | 4.57e-115 | 331 |
| Msa1249780 | AT1G70410.1 | 63.281 | 256 | 81 | 3 | 18 | 271 | 13 | 257 | 4.57e-115 | 331 |
| Msa1249780 | AT5G14740.1 | 66.935 | 248 | 67 | 3 | 24 | 267 | 91 | 327 | 1.96e-114 | 332 |
| Msa1249780 | AT1G70410.2 | 63.281 | 256 | 81 | 3 | 18 | 271 | 35 | 279 | 4.81e-114 | 329 |
| Msa1249780 | AT5G14740.4 | 66.532 | 248 | 67 | 3 | 24 | 267 | 91 | 326 | 1.64e-113 | 330 |
| Msa1249780 | AT5G14740.3 | 65.726 | 248 | 69 | 3 | 24 | 267 | 91 | 326 | 1.35e-112 | 327 |
| Msa1249780 | AT1G23730.2 | 60.956 | 251 | 85 | 3 | 23 | 271 | 18 | 257 | 6.03e-112 | 323 |
| Msa1249780 | AT1G23730.1 | 60.956 | 251 | 85 | 3 | 23 | 271 | 18 | 257 | 6.03e-112 | 323 |
| Msa1249780 | AT3G01500.4 | 64.940 | 251 | 73 | 4 | 24 | 270 | 19 | 258 | 8.39e-112 | 323 |
| Msa1249780 | AT3G01500.1 | 64.940 | 251 | 73 | 4 | 24 | 270 | 19 | 258 | 8.81e-112 | 323 |
| Msa1249780 | AT3G01500.3 | 64.940 | 251 | 73 | 4 | 24 | 270 | 96 | 335 | 7.78e-111 | 323 |
| Msa1249780 | AT3G01500.2 | 64.940 | 251 | 73 | 4 | 24 | 270 | 96 | 335 | 1.45e-110 | 323 |
| Msa1249780 | AT5G14740.5 | 68.984 | 187 | 54 | 2 | 24 | 206 | 91 | 277 | 1.01e-86 | 261 |
| Msa1249780 | AT4G33580.3 | 43.600 | 250 | 124 | 5 | 21 | 266 | 46 | 282 | 1.10e-58 | 189 |
| Msa1249780 | AT4G33580.1 | 43.600 | 250 | 124 | 5 | 21 | 266 | 46 | 282 | 1.10e-58 | 189 |
| Msa1249780 | AT4G33580.2 | 43.426 | 251 | 124 | 6 | 21 | 266 | 46 | 283 | 1.26e-57 | 186 |
| Msa1249780 | AT1G58180.7 | 39.207 | 227 | 125 | 3 | 36 | 261 | 7 | 221 | 3.08e-51 | 168 |
| Msa1249780 | AT1G58180.3 | 39.207 | 227 | 125 | 3 | 36 | 261 | 7 | 221 | 3.08e-51 | 168 |
| Msa1249780 | AT1G58180.6 | 39.207 | 227 | 125 | 3 | 36 | 261 | 7 | 221 | 3.08e-51 | 168 |
| Msa1249780 | AT1G58180.2 | 40.845 | 213 | 113 | 3 | 50 | 261 | 72 | 272 | 7.37e-51 | 169 |
| Msa1249780 | AT1G58180.4 | 40.845 | 213 | 113 | 3 | 50 | 261 | 72 | 272 | 7.37e-51 | 169 |
| Msa1249780 | AT1G58180.1 | 43.455 | 191 | 95 | 3 | 50 | 239 | 72 | 250 | 3.17e-47 | 158 |
| Msa1249780 | AT1G58180.5 | 45.963 | 161 | 85 | 2 | 50 | 209 | 72 | 231 | 2.92e-42 | 146 |
Find 74 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGCTGGATTACAAATT+TGG | 0.136366 | 8_2:+44925317 | None:intergenic |
| GATGCCTTCGTAATCTTAAA+AGG | 0.185878 | 8_2:+44924377 | None:intergenic |
| ATATGCAGTCGTACATTTAA+AGG | 0.224599 | 8_2:-44927056 | Msa1249780:intron |
| GACCTTTGGGCTCTGGCCTT+TGG | 0.228178 | 8_2:+44928279 | None:intergenic |
| TCTTTAACTTTGGCCTTTGC+TGG | 0.230610 | 8_2:+44925304 | None:intergenic |
| GTGGAGAATATTGTGGTTAT+TGG | 0.232163 | 8_2:-44925866 | Msa1249780:CDS |
| CAGTTGCTGTGGAGGTATAA+AGG | 0.311502 | 8_2:-44925840 | Msa1249780:CDS |
| CTTGCAGTGGTCCCATCATC+TGG | 0.312806 | 8_2:+44925803 | None:intergenic |
| CAGAGCAAGTATTCAGGAAC+TGG | 0.335749 | 8_2:-44927091 | Msa1249780:CDS |
| TTTGCATGCTTCTTTAACTT+TGG | 0.354226 | 8_2:+44925294 | None:intergenic |
| GCAAGTTCACCATACACTTC+TGG | 0.358514 | 8_2:+44928301 | None:intergenic |
| TCAACCTGGTGAAGCCTTTG+TGG | 0.374370 | 8_2:-44927290 | Msa1249780:CDS |
| TTTATCCCTTTCTTCAATAC+AGG | 0.374868 | 8_2:-44924556 | Msa1249780:CDS |
| CTCTGAGCAGTGTTCCAACT+TGG | 0.383335 | 8_2:-44925263 | Msa1249780:CDS |
| TAACTGCAGAGCAAGTATTC+AGG | 0.392076 | 8_2:-44927097 | Msa1249780:intron |
| GGAAGCTGTTAATGTCTCTC+TGG | 0.396743 | 8_2:-44924535 | Msa1249780:CDS |
| CCACTTCGAATTCTTTCATC+CGG | 0.397203 | 8_2:+44929920 | None:intergenic |
| AACTAATTAACCTTGTCATA+TGG | 0.407155 | 8_2:+44927241 | None:intergenic |
| CAGCTTCCTGTATTGAAGAA+AGG | 0.413124 | 8_2:+44924550 | None:intergenic |
| CATGGCTGACCTTTGGGCTC+TGG | 0.414761 | 8_2:+44928272 | None:intergenic |
| AGCTTCCTGTATTGAAGAAA+GGG | 0.431243 | 8_2:+44924551 | None:intergenic |
| AGTTGCTGTGGAGGTATAAA+GGG | 0.452052 | 8_2:-44925839 | Msa1249780:CDS |
| CTCATGTCCATCCCAGATGA+TGG | 0.457493 | 8_2:-44925815 | Msa1249780:CDS |
| ACAACAGCATCTCTTACAAA+TGG | 0.482177 | 8_2:+44924495 | None:intergenic |
| CGACGGAGCTGGTTGCTGTC+GGG | 0.495613 | 8_2:-44929958 | Msa1249780:CDS |
| CGTCAACTGCTTGATCTTTG+CGG | 0.498396 | 8_2:+44929979 | None:intergenic |
| ACGACGGAGCTGGTTGCTGT+CGG | 0.498766 | 8_2:-44929959 | Msa1249780:CDS |
| GAACCATGTTGGCAATGTTA+CGG | 0.502088 | 8_2:+44927266 | None:intergenic |
| CACTTCGAATTCTTTCATCC+GGG | 0.509838 | 8_2:+44929921 | None:intergenic |
| CAGGTTGAAAATTTAGAACA+TGG | 0.510353 | 8_2:+44927305 | None:intergenic |
| TATACTTGCCTTCTCCAAGT+TGG | 0.518585 | 8_2:+44925249 | None:intergenic |
| TGAAAATTTAGAACATGGGA+TGG | 0.524270 | 8_2:+44927310 | None:intergenic |
| TGCAGCGAGAAAGCTGATCT+CGG | 0.524567 | 8_2:-44930013 | Msa1249780:CDS |
| GAAGCTGTTAATGTCTCTCT+GGG | 0.527741 | 8_2:-44924534 | Msa1249780:CDS |
| CAAGCAGTTGACGACGGAGC+TGG | 0.534939 | 8_2:-44929969 | Msa1249780:CDS |
| TTGCAGTGGTCCCATCATCT+GGG | 0.535229 | 8_2:+44925804 | None:intergenic |
| GGTCCGTAACATTGCCAACA+TGG | 0.556980 | 8_2:-44927269 | Msa1249780:CDS |
| GAAAATTTAGAACATGGGAT+GGG | 0.561077 | 8_2:+44927311 | None:intergenic |
| CGGACCACAAAGGCTTCACC+AGG | 0.568237 | 8_2:+44927286 | None:intergenic |
| ATTGGACACAGTTGCTGTGG+AGG | 0.570748 | 8_2:-44925848 | Msa1249780:CDS |
| TAATTAACCTTGTCATATGG+TGG | 0.572048 | 8_2:+44927244 | None:intergenic |
| TCATGTCCATCCCAGATGAT+GGG | 0.574366 | 8_2:-44925814 | Msa1249780:CDS |
| ATTACAGGTGGAGAATATTG+TGG | 0.574732 | 8_2:-44925873 | Msa1249780:intron |
| CAGTGACTTCATAGAGCAGT+GGG | 0.594973 | 8_2:-44925341 | Msa1249780:CDS |
| ACGCATCACATCATGAGGAC+TGG | 0.599508 | 8_2:+44930060 | None:intergenic |
| CCAAATTTGTAATCCAGCAA+AGG | 0.600518 | 8_2:-44925317 | Msa1249780:CDS |
| GTTATTGGACACAGTTGCTG+TGG | 0.600992 | 8_2:-44925851 | Msa1249780:CDS |
| GCAGTGTTCCAACTTGGAGA+AGG | 0.602714 | 8_2:-44925257 | Msa1249780:CDS |
| AAGAAAACGATTGCTTTGAA+AGG | 0.606815 | 8_2:-44924471 | Msa1249780:CDS |
| GGAGCTGGTTGCTGTCGGGT+CGG | 0.611008 | 8_2:-44929954 | Msa1249780:CDS |
| TATAGACTTATACCTTGCAG+TGG | 0.613690 | 8_2:+44925790 | None:intergenic |
| AGAGCAAGTATTCAGGAACT+GGG | 0.621056 | 8_2:-44927090 | Msa1249780:CDS |
| ATCATGAGGACTGGCCTGTG+TGG | 0.622795 | 8_2:+44930069 | None:intergenic |
| CAGATGATGGGACCACTGCA+AGG | 0.623424 | 8_2:-44925802 | Msa1249780:intron |
| GTCATATGGTGGAACCATGT+TGG | 0.623869 | 8_2:+44927255 | None:intergenic |
| AGGTTGAAAATTTAGAACAT+GGG | 0.629087 | 8_2:+44927306 | None:intergenic |
| CTTAAACGCATCACATCATG+AGG | 0.629688 | 8_2:+44930055 | None:intergenic |
| TGCCAAAGGCCAGAGCCCAA+AGG | 0.639324 | 8_2:-44928281 | Msa1249780:intron |
| AGTGGTCCCATCATCTGGGA+TGG | 0.640032 | 8_2:+44925808 | None:intergenic |
| TAATCTTAAAAGGACACTGA+GGG | 0.640263 | 8_2:+44924387 | None:intergenic |
| ACAGTGACTTCATAGAGCAG+TGG | 0.642596 | 8_2:-44925342 | Msa1249780:intron |
| CATGGTTCCACCATATGACA+AGG | 0.644313 | 8_2:-44927251 | Msa1249780:intron |
| CGGATGAAAGAATTCGAAGT+GGG | 0.644322 | 8_2:-44929919 | Msa1249780:CDS |
| CGGGTCGGATAGTTTCGACC+CGG | 0.645912 | 8_2:-44929939 | Msa1249780:CDS |
| CCTGTCAATGGGTCCCACAC+AGG | 0.647144 | 8_2:-44930083 | None:intergenic |
| GTGTATGGTGAACTTGCCAA+AGG | 0.654902 | 8_2:-44928295 | Msa1249780:CDS |
| GGCAATGTTACGGACCACAA+AGG | 0.658911 | 8_2:+44927276 | None:intergenic |
| TCATGAGGACTGGCCTGTGT+GGG | 0.663632 | 8_2:+44930070 | None:intergenic |
| AAAGATCAAGCAGTTGACGA+CGG | 0.688194 | 8_2:-44929975 | Msa1249780:CDS |
| GTAATCTTAAAAGGACACTG+AGG | 0.689016 | 8_2:+44924386 | None:intergenic |
| CAACTGCTTGATCTTTGCGG+CGG | 0.692624 | 8_2:+44929982 | None:intergenic |
| CCGGATGAAAGAATTCGAAG+TGG | 0.695864 | 8_2:-44929920 | Msa1249780:CDS |
| GAGCAAGTATTCAGGAACTG+GGG | 0.716151 | 8_2:-44927089 | Msa1249780:CDS |
| AAGCTGTTAATGTCTCTCTG+GGG | 0.771215 | 8_2:-44924533 | Msa1249780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTAAGGTAAAATA+TGG | + | chr8_2:44924890-44924909 | None:intergenic | 10.0% |
| !!! | ATATTTTACCTTAAAATATA+AGG | - | chr8_2:44924889-44924908 | Msa1249780:intron | 10.0% |
| !!! | ATTTTACTTATATTTTGAAA+CGG | - | chr8_2:44925093-44925112 | Msa1249780:intron | 10.0% |
| !!! | CTATATACAATTTTTTTTTT+TGG | - | chr8_2:44925396-44925415 | Msa1249780:intron | 10.0% |
| !! | AAAAAAATATTAAGAAAAAG+AGG | + | chr8_2:44925893-44925912 | None:intergenic | 10.0% |
| !! | TTATAAGAAAGAAAAAAAAA+AGG | + | chr8_2:44926367-44926386 | None:intergenic | 10.0% |
| !! | GAATAAATAGAATAAATAAA+GGG | + | chr8_2:44926656-44926675 | None:intergenic | 10.0% |
| !! | AGAATAAATAGAATAAATAA+AGG | + | chr8_2:44926657-44926676 | None:intergenic | 10.0% |
| !! | TTTATTTATTCTATTTATTC+TGG | - | chr8_2:44926656-44926675 | Msa1249780:intron | 10.0% |
| !!! | AAGATATAGTAAAAATATTT+TGG | - | chr8_2:44926805-44926824 | Msa1249780:intron | 10.0% |
| !! | AAACCATATAAATAAAATTA+CGG | + | chr8_2:44927749-44927768 | None:intergenic | 10.0% |
| !!! | ATTTATATGGTTTTATAAAA+AGG | - | chr8_2:44927756-44927775 | Msa1249780:intron | 10.0% |
| !!! | TTTATATGGTTTTATAAAAA+GGG | - | chr8_2:44927757-44927776 | Msa1249780:intron | 10.0% |
| !!! | TAAGAACAATTTTTTTTAAA+AGG | + | chr8_2:44927819-44927838 | None:intergenic | 10.0% |
| !! | AAAAGTTAGTAATATTAATA+GGG | + | chr8_2:44927895-44927914 | None:intergenic | 10.0% |
| !!! | TAAAATAATAGTTTTTTTTC+TGG | - | chr8_2:44928916-44928935 | Msa1249780:intron | 10.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr8_2:44924986-44925005 | None:intergenic | 15.0% |
| !!! | ATAAGTAAAATTCACTTTTT+AGG | + | chr8_2:44925084-44925103 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAAGCTTTTCTTT+AGG | - | chr8_2:44925911-44925930 | Msa1249780:intron | 15.0% |
| !!! | TTTAAAAAAGCTTTTCTTTA+GGG | - | chr8_2:44925912-44925931 | Msa1249780:intron | 15.0% |
| !!! | GCATTTTTTTTTTTTTTTGA+AGG | - | chr8_2:44926041-44926060 | Msa1249780:intron | 15.0% |
| !!! | TATATTAAAGTTTCCATTTT+TGG | + | chr8_2:44926303-44926322 | None:intergenic | 15.0% |
| !! | GAAACTTTAATATAACAAAT+GGG | - | chr8_2:44926309-44926328 | Msa1249780:intron | 15.0% |
| !!! | GTGAATAATTTATTTTAAAG+AGG | - | chr8_2:44926510-44926529 | Msa1249780:intron | 15.0% |
| !!! | ATTTTTACTATATCTTCTTT+TGG | + | chr8_2:44926801-44926820 | None:intergenic | 15.0% |
| !! | ATATAACAATCATCAATAAT+TGG | + | chr8_2:44927078-44927097 | None:intergenic | 15.0% |
| !! | CTTATAATTAAAGACAAAAA+AGG | + | chr8_2:44927663-44927682 | None:intergenic | 15.0% |
| !!! | TATCCGTAATTTTATTTATA+TGG | - | chr8_2:44927743-44927762 | Msa1249780:intron | 15.0% |
| !! | GAAAAGTTAGTAATATTAAT+AGG | + | chr8_2:44927896-44927915 | None:intergenic | 15.0% |
| !! | TGAATATACATATAAACAAA+TGG | - | chr8_2:44927937-44927956 | Msa1249780:intron | 15.0% |
| !! | TTTCTTAATATAAGTGAAAT+TGG | - | chr8_2:44928012-44928031 | Msa1249780:intron | 15.0% |
| !!! | AATTTTAATAATTCAAGCAT+AGG | + | chr8_2:44928097-44928116 | None:intergenic | 15.0% |
| !! | AATTAACTTATATCTGATAA+CGG | - | chr8_2:44928328-44928347 | Msa1249780:intron | 15.0% |
| !!! | AATTATAACTTTTTCATCTT+AGG | - | chr8_2:44928405-44928424 | Msa1249780:intron | 15.0% |
| !!! | ATTGCAATTTTTTTTTTCAA+AGG | + | chr8_2:44928544-44928563 | None:intergenic | 15.0% |
| !!! | AACAATTAGAGATTTTAATT+TGG | + | chr8_2:44928880-44928899 | None:intergenic | 15.0% |
| !! | ACATATATATTGAGAAAAAT+AGG | + | chr8_2:44929845-44929864 | None:intergenic | 15.0% |
| !! | TCAATATATATGTGAAAATT+TGG | - | chr8_2:44929852-44929871 | Msa1249780:intron | 15.0% |
| !! | AAATTATTCAAACCAAAAAG+CGG | + | chr8_2:44924697-44924716 | None:intergenic | 20.0% |
| !! | TTTACCTTAAAATATAAGGT+TGG | - | chr8_2:44924893-44924912 | Msa1249780:intron | 20.0% |
| !!! | TTATCCAACCTTATATTTTA+AGG | + | chr8_2:44924900-44924919 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTAAAGAGTATGA+TGG | - | chr8_2:44924920-44924939 | Msa1249780:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | - | chr8_2:44924995-44925014 | Msa1249780:intron | 20.0% |
| !! | CATTCATTTAATGATATATG+TGG | - | chr8_2:44925020-44925039 | Msa1249780:intron | 20.0% |
| !! | TATTCATTTAATGATGTATG+TGG | + | chr8_2:44925059-44925078 | None:intergenic | 20.0% |
| !!! | GTAAAAACCATTTTATTTTC+GGG | + | chr8_2:44925147-44925166 | None:intergenic | 20.0% |
| !!! | GGTAAAAACCATTTTATTTT+CGG | + | chr8_2:44925148-44925167 | None:intergenic | 20.0% |
| !! | TTAACTTTACACAAAAGAAT+AGG | - | chr8_2:44925796-44925815 | Msa1249780:intron | 20.0% |
| !!! | GTCAATATAAAAAAGCATAT+AGG | + | chr8_2:44926007-44926026 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTGAAGGAACA+TGG | - | chr8_2:44926048-44926067 | Msa1249780:intron | 20.0% |
| !! | TAAGAAGACTAAGTTAATTA+CGG | + | chr8_2:44926235-44926254 | None:intergenic | 20.0% |
| !! | GGAAACTTTAATATAACAAA+TGG | - | chr8_2:44926308-44926327 | Msa1249780:intron | 20.0% |
| !!! | CATTTTCATATTAAATGATC+AGG | + | chr8_2:44926418-44926437 | None:intergenic | 20.0% |
| !!! | TCTATTTTCCTAGAAATAAT+TGG | + | chr8_2:44926464-44926483 | None:intergenic | 20.0% |
| !!! | ATTTATTTTAAAGAGGAAAG+TGG | - | chr8_2:44926517-44926536 | Msa1249780:intron | 20.0% |
| !!! | TTTATTTTAAAGAGGAAAGT+GGG | - | chr8_2:44926518-44926537 | Msa1249780:intron | 20.0% |
| !! | AATTGATCTTATCCTTTATA+AGG | - | chr8_2:44926623-44926642 | Msa1249780:intron | 20.0% |
| !!! | GATATTTTCTTCATGAATAA+GGG | + | chr8_2:44926760-44926779 | None:intergenic | 20.0% |
| !!! | TGATATTTTCTTCATGAATA+AGG | + | chr8_2:44926761-44926780 | None:intergenic | 20.0% |
| !!! | TAAAAGGTGTTTATAATCAT+AGG | + | chr8_2:44927803-44927822 | None:intergenic | 20.0% |
| !! | AAGTTCTTATACAAATTACT+AGG | - | chr8_2:44927844-44927863 | Msa1249780:intron | 20.0% |
| !!! | TACTAACTTTTCTTGTAATA+TGG | - | chr8_2:44927904-44927923 | Msa1249780:intron | 20.0% |
| !!! | AGAAAAACATTCTATTTCTA+AGG | + | chr8_2:44928223-44928242 | None:intergenic | 20.0% |
| !! | AATGATAAGTGAACTTATAA+CGG | - | chr8_2:44928295-44928314 | Msa1249780:CDS | 20.0% |
| !!! | TAGTTTGATATCTGAAATTA+AGG | - | chr8_2:44928707-44928726 | Msa1249780:intron | 20.0% |
| !! | TCTCTAATTGTTTAAATATC+AGG | - | chr8_2:44928888-44928907 | Msa1249780:intron | 20.0% |
| !!! | TTTTATTGTACAAAAACTCT+TGG | - | chr8_2:44929034-44929053 | Msa1249780:intron | 20.0% |
| !!! | AAAAAGGTAATTATTTTGCA+AGG | + | chr8_2:44929096-44929115 | None:intergenic | 20.0% |
| !!! | CAAGAATTTTTTTAATCAAC+TGG | + | chr8_2:44929304-44929323 | None:intergenic | 20.0% |
| !! | CAGTTGATTAAAAAAATTCT+TGG | - | chr8_2:44929302-44929321 | Msa1249780:intron | 20.0% |
| !! | TTTGTCAATTTGAAAAATAG+AGG | - | chr8_2:44929774-44929793 | Msa1249780:intron | 20.0% |
| !! | TTGTCAATTTGAAAAATAGA+GGG | - | chr8_2:44929775-44929794 | Msa1249780:intron | 20.0% |
| ! | AAGAAAAATTCTTGTAAGCA+TGG | - | chr8_2:44924588-44924607 | Msa1249780:intron | 25.0% |
| ! | AGAAAAATTCTTGTAAGCAT+GGG | - | chr8_2:44924589-44924608 | Msa1249780:intron | 25.0% |
| !!! | CTCAATTACTTGTTTTTGTT+AGG | + | chr8_2:44924731-44924750 | None:intergenic | 25.0% |
| ! | CTAACAAAAACAAGTAATTG+AGG | - | chr8_2:44924729-44924748 | Msa1249780:intron | 25.0% |
| ! | CAATTATGAATATGAAGTTG+CGG | + | chr8_2:44924817-44924836 | None:intergenic | 25.0% |
| ! | GATATATGTGGTTCATAATA+TGG | - | chr8_2:44925032-44925051 | Msa1249780:intron | 25.0% |
| !!! | TACTTATATTTTGAAACGGA+TGG | - | chr8_2:44925097-44925116 | Msa1249780:intron | 25.0% |
| !!! | GTATAGTTTTGAATCAGTTT+GGG | + | chr8_2:44925169-44925188 | None:intergenic | 25.0% |
| !!! | GGTGATGTTTTAACTAAAAT+CGG | - | chr8_2:44925239-44925258 | Msa1249780:intron | 25.0% |
| ! | AGAGTGTGAATTTGAAAAAT+AGG | - | chr8_2:44925296-44925315 | Msa1249780:CDS | 25.0% |
| ! | TTCAAAAAATGTCCTTTAGA+TGG | + | chr8_2:44925654-44925673 | None:intergenic | 25.0% |
| !! | CTTTTGTGTAAAGTTAATGT+GGG | + | chr8_2:44925793-44925812 | None:intergenic | 25.0% |
| !! | TCTTTTGTGTAAAGTTAATG+TGG | + | chr8_2:44925794-44925813 | None:intergenic | 25.0% |
| ! | AAAAAAAAAGACTGTTTCAG+TGG | - | chr8_2:44925839-44925858 | Msa1249780:CDS | 25.0% |
| !!! | GCTTTTTTATATTGACAACA+TGG | - | chr8_2:44926011-44926030 | Msa1249780:intron | 25.0% |
| ! | TATATGCTTATTAGTCAACT+TGG | - | chr8_2:44926073-44926092 | Msa1249780:intron | 25.0% |
| ! | TATTCTCTAAACTCCAAAAA+TGG | - | chr8_2:44926287-44926306 | Msa1249780:intron | 25.0% |
| !! | TTATCTGTCCAATTATTTCT+AGG | - | chr8_2:44926453-44926472 | Msa1249780:intron | 25.0% |
| !! | AGGTTGAAAATTTAGAACAT+GGG | + | chr8_2:44927165-44927184 | None:intergenic | 25.0% |
| ! | AACTAATTAACCTTGTCATA+TGG | + | chr8_2:44927230-44927249 | None:intergenic | 25.0% |
| !!! | AATGTATGATGGACAAATTA+AGG | + | chr8_2:44927256-44927275 | None:intergenic | 25.0% |
| ! | TGACATAGTAAAATGTATGA+TGG | + | chr8_2:44927267-44927286 | None:intergenic | 25.0% |
| !!! | TATGGTTTTATAAAAAGGGA+TGG | - | chr8_2:44927761-44927780 | Msa1249780:intron | 25.0% |
| ! | GGTCATAGAGATTTATAATA+AGG | - | chr8_2:44928033-44928052 | Msa1249780:intron | 25.0% |
| ! | CATAGAGATTTATAATAAGG+AGG | - | chr8_2:44928036-44928055 | Msa1249780:intron | 25.0% |
| ! | AGATTTATAATAAGGAGGAA+CGG | - | chr8_2:44928041-44928060 | Msa1249780:intron | 25.0% |
| !!! | ATGAACTTTAAAGCTCAATT+TGG | - | chr8_2:44928256-44928275 | Msa1249780:intron | 25.0% |
| ! | CTCAATTTGGTAAAAACTAA+CGG | - | chr8_2:44928269-44928288 | Msa1249780:intron | 25.0% |
| ! | TTTAGCACAACAACAAAAAA+GGG | + | chr8_2:44928567-44928586 | None:intergenic | 25.0% |
| !!! | ATCATATGTACTTTAGCTTT+TGG | + | chr8_2:44928801-44928820 | None:intergenic | 25.0% |
| !!! | AACTATTTTGGTAGCTTTTT+CGG | - | chr8_2:44928832-44928851 | Msa1249780:intron | 25.0% |
| ! | CTAATTGTTTAAATATCAGG+TGG | - | chr8_2:44928891-44928910 | Msa1249780:intron | 25.0% |
| ! | ATGACATTTAAACAATTCTC+CGG | + | chr8_2:44928980-44928999 | None:intergenic | 25.0% |
| !! | TTTTATGACATATCATTCCT+TGG | - | chr8_2:44929269-44929288 | Msa1249780:intron | 25.0% |
| !!! | AAAGAGATGAAAGCTTTATT+TGG | - | chr8_2:44929726-44929745 | Msa1249780:intron | 25.0% |
| ATTACTCGACTCATTGTTTA+TGG | + | chr8_2:44924653-44924672 | None:intergenic | 30.0% | |
| !!! | TGATTTGTTAATCCGCTTTT+TGG | - | chr8_2:44924682-44924701 | Msa1249780:intron | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr8_2:44924983-44925002 | None:intergenic | 30.0% |
| !!! | AAACCATTTTATTTTCGGGT+CGG | + | chr8_2:44925143-44925162 | None:intergenic | 30.0% |
| !!! | CGTATAGTTTTGAATCAGTT+TGG | + | chr8_2:44925170-44925189 | None:intergenic | 30.0% |
| ! | AACTGATTCAAAACTATACG+TGG | - | chr8_2:44925170-44925189 | Msa1249780:intron | 30.0% |
| ACTCATCAAGGTGAATAAAT+GGG | - | chr8_2:44925446-44925465 | Msa1249780:intron | 30.0% | |
| TTGAACTATGTTCATTGGAA+CGG | - | chr8_2:44925523-44925542 | Msa1249780:intron | 30.0% | |
| GTTAACATGTTACCATCTAA+AGG | - | chr8_2:44925639-44925658 | Msa1249780:intron | 30.0% | |
| GTATATGTAAAAAGAGACCA+AGG | - | chr8_2:44925950-44925969 | Msa1249780:intron | 30.0% | |
| TGATCTTATCCTTTATAAGG+TGG | - | chr8_2:44926626-44926645 | Msa1249780:intron | 30.0% | |
| ! | GAAAATTTAGAACATGGGAT+GGG | + | chr8_2:44927160-44927179 | None:intergenic | 30.0% |
| ! | TGAAAATTTAGAACATGGGA+TGG | + | chr8_2:44927161-44927180 | None:intergenic | 30.0% |
| ! | CAGGTTGAAAATTTAGAACA+TGG | + | chr8_2:44927166-44927185 | None:intergenic | 30.0% |
| !! | CATGTTCTAAATTTTCAACC+TGG | - | chr8_2:44927164-44927183 | Msa1249780:intron | 30.0% |
| TAATTAACCTTGTCATATGG+TGG | + | chr8_2:44927227-44927246 | None:intergenic | 30.0% | |
| ATATGCAGTCGTACATTTAA+AGG | - | chr8_2:44927412-44927431 | Msa1249780:intron | 30.0% | |
| !!! | TTCCTTTTTTCCCTATAATG+AGG | - | chr8_2:44927452-44927471 | Msa1249780:intron | 30.0% |
| !!! | TTTTTTCCCTATAATGAGGT+GGG | - | chr8_2:44927456-44927475 | Msa1249780:intron | 30.0% |
| GTGAAAACTACTAGTTAGTT+TGG | - | chr8_2:44927491-44927510 | Msa1249780:intron | 30.0% | |
| ! | AAAACTACTAGTTAGTTTGG+TGG | - | chr8_2:44927494-44927513 | Msa1249780:intron | 30.0% |
| TGTGTATCATAAACCAAAGA+TGG | + | chr8_2:44927563-44927582 | None:intergenic | 30.0% | |
| ACAAAATTACTCGTAACTCA+TGG | + | chr8_2:44927627-44927646 | None:intergenic | 30.0% | |
| ! | GTTTTATAAAAAGGGATGGA+TGG | - | chr8_2:44927765-44927784 | Msa1249780:intron | 30.0% |
| ! | AAGGTGTTTATAATCATAGG+CGG | + | chr8_2:44927800-44927819 | None:intergenic | 30.0% |
| TGTCATGAGGTATACATAAT+TGG | - | chr8_2:44928150-44928169 | Msa1249780:intron | 30.0% | |
| AAGTGGTAGATCAAAAAGTT+CGG | + | chr8_2:44928176-44928195 | None:intergenic | 30.0% | |
| AACACATGCAATAACATAAG+TGG | + | chr8_2:44928193-44928212 | None:intergenic | 30.0% | |
| ! | AGAATGTTTTTCTTCCAACA+TGG | - | chr8_2:44928230-44928249 | Msa1249780:intron | 30.0% |
| TTAAAGTTCATCTTCCATGT+TGG | + | chr8_2:44928247-44928266 | None:intergenic | 30.0% | |
| GTTATTGAATTCGTAGTGTT+TGG | - | chr8_2:44928360-44928379 | Msa1249780:intron | 30.0% | |
| ACTTACACTATGATTCTGAA+TGG | + | chr8_2:44928474-44928493 | None:intergenic | 30.0% | |
| TTGGTATTAGTGGTACATAA+TGG | - | chr8_2:44928518-44928537 | Msa1249780:intron | 30.0% | |
| CTTTAGCACAACAACAAAAA+AGG | + | chr8_2:44928568-44928587 | None:intergenic | 30.0% | |
| !!! | CTTTTTTGTTGTTGTGCTAA+AGG | - | chr8_2:44928566-44928585 | Msa1249780:intron | 30.0% |
| TGCTAAAGGAAATGTATTAC+AGG | - | chr8_2:44928580-44928599 | Msa1249780:intron | 30.0% | |
| TAAAGGAAATGTATTACAGG+TGG | - | chr8_2:44928583-44928602 | Msa1249780:intron | 30.0% | |
| ! | CCATTTTGTGATAACTTTTC+CGG | - | chr8_2:44928958-44928977 | Msa1249780:intron | 30.0% |
| CACTGTATGATCATAGAAAA+AGG | + | chr8_2:44929112-44929131 | None:intergenic | 30.0% | |
| ! | TTTGCATGCTTCTTTAACTT+TGG | + | chr8_2:44929177-44929196 | None:intergenic | 30.0% |
| ACTTAAACTAGAGATTGATG+TGG | + | chr8_2:44929249-44929268 | None:intergenic | 30.0% | |
| AGTTAGTTACTTGAGATACA+TGG | - | chr8_2:44929397-44929416 | Msa1249780:intron | 30.0% | |
| !! | CCAATTTGTTAGAACAACTA+TGG | + | chr8_2:44929569-44929588 | None:intergenic | 30.0% |
| CCATAGTTGTTCTAACAAAT+TGG | - | chr8_2:44929566-44929585 | Msa1249780:intron | 30.0% | |
| TCAAGAACTGAGAATGTATT+GGG | + | chr8_2:44929681-44929700 | None:intergenic | 30.0% | |
| ATCAAGAACTGAGAATGTAT+TGG | + | chr8_2:44929682-44929701 | None:intergenic | 30.0% | |
| AATACATTCTCAGTTCTTGA+TGG | - | chr8_2:44929681-44929700 | Msa1249780:intron | 30.0% | |
| TTTCAAGATACTCGTAGTAA+TGG | - | chr8_2:44929750-44929769 | Msa1249780:intron | 30.0% | |
| AATACAAGATTACGTGACTA+AGG | + | chr8_2:44929881-44929900 | None:intergenic | 30.0% | |
| TTTATCCCTTTCTTCAATAC+AGG | - | chr8_2:44929912-44929931 | Msa1249780:CDS | 30.0% | |
| ! | AAGAAAACGATTGCTTTGAA+AGG | - | chr8_2:44929997-44930016 | Msa1249780:CDS | 30.0% |
| ! | TGCACATTACGATTTTGTTA+AGG | - | chr8_2:44930020-44930039 | Msa1249780:CDS | 30.0% |
| ! | GCACATTACGATTTTGTTAA+GGG | - | chr8_2:44930021-44930040 | Msa1249780:CDS | 30.0% |
| !!! | TTTATTTTCGGGTCGGTATT+AGG | + | chr8_2:44925136-44925155 | None:intergenic | 35.0% |
| ATACCGACCCGAAAATAAAA+TGG | - | chr8_2:44925137-44925156 | Msa1249780:intron | 35.0% | |
| ! | ATATAAGGGAACCCCAATTT+TGG | + | chr8_2:44925212-44925231 | None:intergenic | 35.0% |
| CATCACCCCAAATCATATAA+GGG | + | chr8_2:44925226-44925245 | None:intergenic | 35.0% | |
| ACATCACCCCAAATCATATA+AGG | + | chr8_2:44925227-44925246 | None:intergenic | 35.0% | |
| ! | TCTATTCTAGGGATGTACAT+GGG | + | chr8_2:44925275-44925294 | None:intergenic | 35.0% |
| TTCACACTCTCTCTATTCTA+GGG | + | chr8_2:44925286-44925305 | None:intergenic | 35.0% | |
| ATTCACACTCTCTCTATTCT+AGG | + | chr8_2:44925287-44925306 | None:intergenic | 35.0% | |
| ! | ACAAAACTTTTCCTCTCAGA+GGG | + | chr8_2:44925362-44925381 | None:intergenic | 35.0% |
| !! | TTTTGGGTCAATTAGTCTAG+TGG | - | chr8_2:44925413-44925432 | Msa1249780:intron | 35.0% |
| CACTCATCAAGGTGAATAAA+TGG | - | chr8_2:44925445-44925464 | Msa1249780:intron | 35.0% | |
| CTCATCAAGGTGAATAAATG+GGG | - | chr8_2:44925447-44925466 | Msa1249780:intron | 35.0% | |
| GTGAATAAATGGGGAATCAT+AGG | - | chr8_2:44925456-44925475 | Msa1249780:intron | 35.0% | |
| GAACATCGCATTATATATGC+AGG | + | chr8_2:44925496-44925515 | None:intergenic | 35.0% | |
| ACCAGTTGAACTATGTTCAT+TGG | - | chr8_2:44925518-44925537 | Msa1249780:intron | 35.0% | |
| TCCAATGAACATAGTTCAAC+TGG | + | chr8_2:44925522-44925541 | None:intergenic | 35.0% | |
| AGTGTTAGAGTGAAAATCCA+TGG | + | chr8_2:44925722-44925741 | None:intergenic | 35.0% | |
| AAATAGAAGCTCTACTTCCT+TGG | + | chr8_2:44925970-44925989 | None:intergenic | 35.0% | |
| CTTCTATTTGCCAAGGAATA+AGG | - | chr8_2:44925981-44926000 | Msa1249780:intron | 35.0% | |
| ! | AGGAAAAAACCAGAAGTGTA+TGG | - | chr8_2:44926158-44926177 | Msa1249780:intron | 35.0% |
| TAATAACATGGCTGACCTTT+GGG | + | chr8_2:44926205-44926224 | None:intergenic | 35.0% | |
| GTCAGCCATGTTATTAGATT+CGG | - | chr8_2:44926209-44926228 | Msa1249780:intron | 35.0% | |
| TAGTCTTCTTAATTCCCCAT+TGG | - | chr8_2:44926244-44926263 | Msa1249780:intron | 35.0% | |
| AGTCTTCTTAATTCCCCATT+GGG | - | chr8_2:44926245-44926264 | Msa1249780:intron | 35.0% | |
| GAAGAGACAAATGCTTTATG+TGG | - | chr8_2:44926331-44926350 | Msa1249780:intron | 35.0% | |
| TGCATTATGTGTATGAAGAG+TGG | - | chr8_2:44926697-44926716 | Msa1249780:intron | 35.0% | |
| ! | TTTAACCAAAGCATCACTAG+AGG | + | chr8_2:44927053-44927072 | None:intergenic | 35.0% |
| AAAACCAGAAACTGCAAGTT+GGG | + | chr8_2:44927113-44927132 | None:intergenic | 35.0% | |
| CTCTGCAGTTATTAACAGAA+AGG | + | chr8_2:44927362-44927381 | None:intergenic | 35.0% | |
| TATAGGGAAAAAAGGAATGC+TGG | + | chr8_2:44927449-44927468 | None:intergenic | 35.0% | |
| CACCTCATTATAGGGAAAAA+AGG | + | chr8_2:44927457-44927476 | None:intergenic | 35.0% | |
| !!! | CTTTTTTCCCTATAATGAGG+TGG | - | chr8_2:44927455-44927474 | Msa1249780:intron | 35.0% |
| ! | CAAAGATGGACTCAAAAGTA+GGG | + | chr8_2:44927549-44927568 | None:intergenic | 35.0% |
| TTATAATAAGGAGGAACGGA+AGG | - | chr8_2:44928045-44928064 | Msa1249780:intron | 35.0% | |
| ATACCTCATGACAACAAACA+TGG | + | chr8_2:44928143-44928162 | None:intergenic | 35.0% | |
| ! | ATTCTGAATGGAAAGTGTGA+GGG | + | chr8_2:44928462-44928481 | None:intergenic | 35.0% |
| AGCATAAGAAGAAAGTGAGT+TGG | - | chr8_2:44928499-44928518 | Msa1249780:intron | 35.0% | |
| !! | AGAAAGTGAGTTGGTATTAG+TGG | - | chr8_2:44928508-44928527 | Msa1249780:intron | 35.0% |
| ATTACAGGTGGAGAATATTG+TGG | - | chr8_2:44928595-44928614 | Msa1249780:intron | 35.0% | |
| GTGGAGAATATTGTGGTTAT+TGG | - | chr8_2:44928602-44928621 | Msa1249780:intron | 35.0% | |
| TATAGACTTATACCTTGCAG+TGG | + | chr8_2:44928681-44928700 | None:intergenic | 35.0% | |
| ATTTGGATCACCAAGTTAAC+TGG | + | chr8_2:44928863-44928882 | None:intergenic | 35.0% | |
| CCGGAAAAGTTATCACAAAA+TGG | + | chr8_2:44928961-44928980 | None:intergenic | 35.0% | |
| CCTTTGCTGGATTACAAATT+TGG | + | chr8_2:44929154-44929173 | None:intergenic | 35.0% | |
| CCAAATTTGTAATCCAGCAA+AGG | - | chr8_2:44929151-44929170 | Msa1249780:intron | 35.0% | |
| TCAACTGGAGTAATAAACCA+AGG | + | chr8_2:44929289-44929308 | None:intergenic | 35.0% | |
| TTGCTTACACACTAAGAAAG+AGG | + | chr8_2:44929537-44929556 | None:intergenic | 35.0% | |
| TGGTTAGAACTCACAAATTC+AGG | - | chr8_2:44929610-44929629 | Msa1249780:intron | 35.0% | |
| GGTTAGAACTCACAAATTCA+GGG | - | chr8_2:44929611-44929630 | Msa1249780:intron | 35.0% | |
| CAAGAACTGAGAATGTATTG+GGG | + | chr8_2:44929680-44929699 | None:intergenic | 35.0% | |
| ! | AGTTCTTGATGGCAAGAATT+GGG | - | chr8_2:44929692-44929711 | Msa1249780:intron | 35.0% |
| ! | AATAGAGGGACTATTTTGCT+TGG | - | chr8_2:44929789-44929808 | Msa1249780:intron | 35.0% |
| ! | CTTGGTGATTGCAGTTTATA+AGG | - | chr8_2:44929807-44929826 | Msa1249780:intron | 35.0% |
| AGCTTCCTGTATTGAAGAAA+GGG | + | chr8_2:44929920-44929939 | None:intergenic | 35.0% | |
| ACAACAGCATCTCTTACAAA+TGG | + | chr8_2:44929976-44929995 | None:intergenic | 35.0% | |
| CTTAAACGCATCACATCATG+AGG | + | chr8_2:44924416-44924435 | None:intergenic | 40.0% | |
| AAAGATCAAGCAGTTGACGA+CGG | - | chr8_2:44924493-44924512 | Msa1249780:CDS | 40.0% | |
| CACTTCGAATTCTTTCATCC+GGG | + | chr8_2:44924550-44924569 | None:intergenic | 40.0% | |
| CCACTTCGAATTCTTTCATC+CGG | + | chr8_2:44924551-44924570 | None:intergenic | 40.0% | |
| CGGATGAAAGAATTCGAAGT+GGG | - | chr8_2:44924549-44924568 | Msa1249780:CDS | 40.0% | |
| CTTGTAAGCATGGGTGTATA+TGG | - | chr8_2:44924598-44924617 | Msa1249780:intron | 40.0% | |
| AAGCATGGGTGTATATGGTT+TGG | - | chr8_2:44924603-44924622 | Msa1249780:intron | 40.0% | |
| AGCATGGGTGTATATGGTTT+GGG | - | chr8_2:44924604-44924623 | Msa1249780:intron | 40.0% | |
| ! | TTTGAAACGGATGGAGTATG+TGG | - | chr8_2:44925106-44925125 | Msa1249780:intron | 40.0% |
| TTCTCGCACCAAACCAAAAT+TGG | - | chr8_2:44925196-44925215 | Msa1249780:intron | 40.0% | |
| TCTCGCACCAAACCAAAATT+GGG | - | chr8_2:44925197-44925216 | Msa1249780:intron | 40.0% | |
| TGGGGTTCCCTTATATGATT+TGG | - | chr8_2:44925216-44925235 | Msa1249780:intron | 40.0% | |
| GGGGTTCCCTTATATGATTT+GGG | - | chr8_2:44925217-44925236 | Msa1249780:intron | 40.0% | |
| GGGTTCCCTTATATGATTTG+GGG | - | chr8_2:44925218-44925237 | Msa1249780:intron | 40.0% | |
| ! | CTCTATTCTAGGGATGTACA+TGG | + | chr8_2:44925276-44925295 | None:intergenic | 40.0% |
| ! | TGTTTTACAAACCCTCTGAG+AGG | - | chr8_2:44925348-44925367 | Msa1249780:intron | 40.0% |
| ! | GACAAAACTTTTCCTCTCAG+AGG | + | chr8_2:44925363-44925382 | None:intergenic | 40.0% |
| GGCTACAAATTCACTCATCA+AGG | - | chr8_2:44925434-44925453 | Msa1249780:intron | 40.0% | |
| TTCACAAACCACTTCTACCA+TGG | - | chr8_2:44925702-44925721 | Msa1249780:intron | 40.0% | |
| GTGAAAATCCATGGTAGAAG+TGG | + | chr8_2:44925713-44925732 | None:intergenic | 40.0% | |
| AGTAGAGCTTCTATTTGCCA+AGG | - | chr8_2:44925974-44925993 | Msa1249780:intron | 40.0% | |
| !! | AGCATATAGGCCTTATTCCT+TGG | + | chr8_2:44925994-44926013 | None:intergenic | 40.0% |
| CTAATAACATGGCTGACCTT+TGG | + | chr8_2:44926206-44926225 | None:intergenic | 40.0% | |
| TACGGCCGAATCTAATAACA+TGG | + | chr8_2:44926217-44926236 | None:intergenic | 40.0% | |
| AAGGGACTTCCACCTTATAA+AGG | + | chr8_2:44926638-44926657 | None:intergenic | 40.0% | |
| CTAAGTTGTCCCGTAATCTT+AGG | + | chr8_2:44927016-44927035 | None:intergenic | 40.0% | |
| AGATTACGGGACAACTTAGT+TGG | - | chr8_2:44927017-44927036 | Msa1249780:intron | 40.0% | |
| GATTACGGGACAACTTAGTT+GGG | - | chr8_2:44927018-44927037 | Msa1249780:intron | 40.0% | |
| ! | ATTAGCCTCTAGTGATGCTT+TGG | - | chr8_2:44927045-44927064 | Msa1249780:intron | 40.0% |
| ATTTCCCAACTTGCAGTTTC+TGG | - | chr8_2:44927106-44927125 | Msa1249780:intron | 40.0% | |
| GAAAACCAGAAACTGCAAGT+TGG | + | chr8_2:44927114-44927133 | None:intergenic | 40.0% | |
| GAACCATGTTGGCAATGTTA+CGG | + | chr8_2:44927205-44927224 | None:intergenic | 40.0% | |
| TAACTGCAGAGCAAGTATTC+AGG | - | chr8_2:44927371-44927390 | Msa1249780:intron | 40.0% | |
| AGAGCAAGTATTCAGGAACT+GGG | - | chr8_2:44927378-44927397 | Msa1249780:intron | 40.0% | |
| ATGTGACCCACCTCATTATA+GGG | + | chr8_2:44927465-44927484 | None:intergenic | 40.0% | |
| TATGTGACCCACCTCATTAT+AGG | + | chr8_2:44927466-44927485 | None:intergenic | 40.0% | |
| ! | ACTACTAGTTAGTTTGGTGG+TGG | - | chr8_2:44927497-44927516 | Msa1249780:intron | 40.0% |
| TAGGGACATGCAAGAGAAAA+GGG | + | chr8_2:44927531-44927550 | None:intergenic | 40.0% | |
| ! | CCAAAGATGGACTCAAAAGT+AGG | + | chr8_2:44927550-44927569 | None:intergenic | 40.0% |
| !! | CCTACTTTTGAGTCCATCTT+TGG | - | chr8_2:44927547-44927566 | Msa1249780:intron | 40.0% |
| TGGCATTTAGCATAGACAGA+AGG | + | chr8_2:44927593-44927612 | None:intergenic | 40.0% | |
| AACTCATGGTATTGCATAGG+TGG | + | chr8_2:44927613-44927632 | None:intergenic | 40.0% | |
| CGTAACTCATGGTATTGCAT+AGG | + | chr8_2:44927616-44927635 | None:intergenic | 40.0% | |
| AAACATGGTGGTTGTTGTGA+TGG | + | chr8_2:44928128-44928147 | None:intergenic | 40.0% | |
| ! | GATTCTGAATGGAAAGTGTG+AGG | + | chr8_2:44928463-44928482 | None:intergenic | 40.0% |
| ! | AGTTGCTGTGGAGGTATAAA+GGG | - | chr8_2:44928629-44928648 | Msa1249780:intron | 40.0% |
| TTCGGAACTTCCAGTTAACT+TGG | - | chr8_2:44928850-44928869 | Msa1249780:intron | 40.0% | |
| AAATGTCATCCACTAGTCAC+TGG | - | chr8_2:44928991-44929010 | Msa1249780:intron | 40.0% | |
| ! | TCTTTAACTTTGGCCTTTGC+TGG | + | chr8_2:44929167-44929186 | None:intergenic | 40.0% |
| TATACTTGCCTTCTCCAAGT+TGG | + | chr8_2:44929222-44929241 | None:intergenic | 40.0% | |
| CTTAGTGTGTAAGCAATCGT+TGG | - | chr8_2:44929541-44929560 | Msa1249780:intron | 40.0% | |
| ! | CAGTTCTTGATGGCAAGAAT+TGG | - | chr8_2:44929691-44929710 | Msa1249780:intron | 40.0% |
| ATGGCAAGAATTGGGAAAGA+CGG | - | chr8_2:44929700-44929719 | Msa1249780:intron | 40.0% | |
| CAGCTTCCTGTATTGAAGAA+AGG | + | chr8_2:44929921-44929940 | None:intergenic | 40.0% | |
| GAAGCTGTTAATGTCTCTCT+GGG | - | chr8_2:44929934-44929953 | Msa1249780:CDS | 40.0% | |
| AAGCTGTTAATGTCTCTCTG+GGG | - | chr8_2:44929935-44929954 | Msa1249780:CDS | 40.0% | |
| ! | TTAAGGGAGCTTTTGAACTG+TGG | - | chr8_2:44930037-44930056 | Msa1249780:CDS | 40.0% |
| ! | TAAGGGAGCTTTTGAACTGT+GGG | - | chr8_2:44930038-44930057 | Msa1249780:CDS | 40.0% |
| CGTCAACTGCTTGATCTTTG+CGG | + | chr8_2:44924492-44924511 | None:intergenic | 45.0% | |
| CCGGATGAAAGAATTCGAAG+TGG | - | chr8_2:44924548-44924567 | Msa1249780:CDS | 45.0% | |
| CTCGCACCAAACCAAAATTG+GGG | - | chr8_2:44925198-44925217 | Msa1249780:intron | 45.0% | |
| !!! | AGGGAACCCCAATTTTGGTT+TGG | + | chr8_2:44925207-44925226 | None:intergenic | 45.0% |
| ! | TTCTAGGGATGTACATGGGT+CGG | + | chr8_2:44925271-44925290 | None:intergenic | 45.0% |
| GCAAGTTCACCATACACTTC+TGG | + | chr8_2:44926170-44926189 | None:intergenic | 45.0% | |
| GTGTATGGTGAACTTGCCAA+AGG | - | chr8_2:44926173-44926192 | Msa1249780:intron | 45.0% | |
| TAATTCCCCATTGGGCTATC+TGG | - | chr8_2:44926253-44926272 | Msa1249780:intron | 45.0% | |
| AAGAGTGGCTCACTAAACAC+TGG | - | chr8_2:44926712-44926731 | Msa1249780:intron | 45.0% | |
| !! | GTGAGAATAAGAAGCACTGC+AGG | - | chr8_2:44926933-44926952 | Msa1249780:intron | 45.0% |
| TAATCTTAGGCGTGTAGCTC+GGG | + | chr8_2:44927003-44927022 | None:intergenic | 45.0% | |
| GTAATCTTAGGCGTGTAGCT+CGG | + | chr8_2:44927004-44927023 | None:intergenic | 45.0% | |
| GAGCTACACGCCTAAGATTA+CGG | - | chr8_2:44927003-44927022 | Msa1249780:intron | 45.0% | |
| AGCTACACGCCTAAGATTAC+GGG | - | chr8_2:44927004-44927023 | Msa1249780:intron | 45.0% | |
| ! | GTCATATGGTGGAACCATGT+TGG | + | chr8_2:44927216-44927235 | None:intergenic | 45.0% |
| CATGGTTCCACCATATGACA+AGG | - | chr8_2:44927217-44927236 | Msa1249780:intron | 45.0% | |
| CAGAGCAAGTATTCAGGAAC+TGG | - | chr8_2:44927377-44927396 | Msa1249780:intron | 45.0% | |
| GAGCAAGTATTCAGGAACTG+GGG | - | chr8_2:44927379-44927398 | Msa1249780:intron | 45.0% | |
| GTAGGGACATGCAAGAGAAA+AGG | + | chr8_2:44927532-44927551 | None:intergenic | 45.0% | |
| CCTCATGACAACAAACATGG+TGG | + | chr8_2:44928140-44928159 | None:intergenic | 45.0% | |
| !! | CCACCATGTTTGTTGTCATG+AGG | - | chr8_2:44928137-44928156 | Msa1249780:intron | 45.0% |
| AAAGTGTGAGGGTAGGTGTT+TGG | + | chr8_2:44928451-44928470 | None:intergenic | 45.0% | |
| ! | TGAATGGAAAGTGTGAGGGT+AGG | + | chr8_2:44928458-44928477 | None:intergenic | 45.0% |
| GTTATTGGACACAGTTGCTG+TGG | - | chr8_2:44928617-44928636 | Msa1249780:intron | 45.0% | |
| ! | CAGTTGCTGTGGAGGTATAA+AGG | - | chr8_2:44928628-44928647 | Msa1249780:intron | 45.0% |
| TCATGTCCATCCCAGATGAT+GGG | - | chr8_2:44928654-44928673 | Msa1249780:intron | 45.0% | |
| CCAACAAATCCAGTGACTAG+TGG | + | chr8_2:44929003-44929022 | None:intergenic | 45.0% | |
| CCACTAGTCACTGGATTTGT+TGG | - | chr8_2:44929000-44929019 | Msa1249780:intron | 45.0% | |
| ACAGTGACTTCATAGAGCAG+TGG | - | chr8_2:44929126-44929145 | Msa1249780:intron | 45.0% | |
| CAGTGACTTCATAGAGCAGT+GGG | - | chr8_2:44929127-44929146 | Msa1249780:intron | 45.0% | |
| GCAACGATGACTCGTAGTAA+TGG | - | chr8_2:44929651-44929670 | Msa1249780:intron | 45.0% | |
| GGAAGCTGTTAATGTCTCTC+TGG | - | chr8_2:44929933-44929952 | Msa1249780:CDS | 45.0% | |
| !!! | TATATACAATTTTTTTTTTT+GGG | - | chr8_2:44925397-44925416 | Msa1249780:intron | 5.0% |
| !! | TGTTTATAAATAATAATAAA+TGG | + | chr8_2:44925570-44925589 | None:intergenic | 5.0% |
| !!! | TTTTTAAATATTATTTTTTC+AGG | - | chr8_2:44926138-44926157 | Msa1249780:intron | 5.0% |
| !!! | TAAAAATTATTAAACTATTT+TGG | - | chr8_2:44928820-44928839 | Msa1249780:intron | 5.0% |
| ACGCATCACATCATGAGGAC+TGG | + | chr8_2:44924411-44924430 | None:intergenic | 50.0% | |
| TGCAGCGAGAAAGCTGATCT+CGG | - | chr8_2:44924455-44924474 | Msa1249780:CDS | 50.0% | |
| CAACTGCTTGATCTTTGCGG+CGG | + | chr8_2:44924489-44924508 | None:intergenic | 50.0% | |
| TCTAGGGATGTACATGGGTC+GGG | + | chr8_2:44925270-44925289 | None:intergenic | 50.0% | |
| TCAACCTGGTGAAGCCTTTG+TGG | - | chr8_2:44927178-44927197 | Msa1249780:intron | 50.0% | |
| GGCAATGTTACGGACCACAA+AGG | + | chr8_2:44927195-44927214 | None:intergenic | 50.0% | |
| GGTCCGTAACATTGCCAACA+TGG | - | chr8_2:44927199-44927218 | Msa1249780:intron | 50.0% | |
| ATTGGACACAGTTGCTGTGG+AGG | - | chr8_2:44928620-44928639 | Msa1249780:intron | 50.0% | |
| CTCATGTCCATCCCAGATGA+TGG | - | chr8_2:44928653-44928672 | Msa1249780:intron | 50.0% | |
| TTGCAGTGGTCCCATCATCT+GGG | + | chr8_2:44928667-44928686 | None:intergenic | 50.0% | |
| CTCTGAGCAGTGTTCCAACT+TGG | - | chr8_2:44929205-44929224 | Msa1249780:intron | 50.0% | |
| GCAGTGTTCCAACTTGGAGA+AGG | - | chr8_2:44929211-44929230 | Msa1249780:intron | 50.0% | |
| ATCACGAGCTCGATCATGTG+TGG | - | chr8_2:44929590-44929609 | Msa1249780:intron | 50.0% | |
| !! | TCATGAGGACTGGCCTGTGT+GGG | + | chr8_2:44924401-44924420 | None:intergenic | 55.0% |
| !! | ATCATGAGGACTGGCCTGTG+TGG | + | chr8_2:44924402-44924421 | None:intergenic | 55.0% |
| TTCCCCATTGGGCTATCTGG+TGG | - | chr8_2:44926256-44926275 | Msa1249780:intron | 55.0% | |
| TCCCCATTGGGCTATCTGGT+GGG | - | chr8_2:44926257-44926276 | Msa1249780:intron | 55.0% | |
| ACCCACCAGATAGCCCAATG+GGG | + | chr8_2:44926261-44926280 | None:intergenic | 55.0% | |
| GACCCACCAGATAGCCCAAT+GGG | + | chr8_2:44926262-44926281 | None:intergenic | 55.0% | |
| TGACCCACCAGATAGCCCAA+TGG | + | chr8_2:44926263-44926282 | None:intergenic | 55.0% | |
| AGTGGTCCCATCATCTGGGA+TGG | + | chr8_2:44928663-44928682 | None:intergenic | 55.0% | |
| CTTGCAGTGGTCCCATCATC+TGG | + | chr8_2:44928668-44928687 | None:intergenic | 55.0% | |
| !! | CAGATGATGGGACCACTGCA+AGG | - | chr8_2:44928666-44928685 | Msa1249780:intron | 55.0% |
| CAAGCAGTTGACGACGGAGC+TGG | - | chr8_2:44924499-44924518 | Msa1249780:CDS | 60.0% | |
| ACGACGGAGCTGGTTGCTGT+CGG | - | chr8_2:44924509-44924528 | Msa1249780:CDS | 60.0% | |
| CGGGTCGGATAGTTTCGACC+CGG | - | chr8_2:44924529-44924548 | Msa1249780:CDS | 60.0% | |
| TGCCAAAGGCCAGAGCCCAA+AGG | - | chr8_2:44926187-44926206 | Msa1249780:intron | 60.0% | |
| ! | GACCTTTGGGCTCTGGCCTT+TGG | + | chr8_2:44926192-44926211 | None:intergenic | 60.0% |
| CATGGCTGACCTTTGGGCTC+TGG | + | chr8_2:44926199-44926218 | None:intergenic | 60.0% | |
| CGGACCACAAAGGCTTCACC+AGG | + | chr8_2:44927185-44927204 | None:intergenic | 60.0% | |
| CGACGGAGCTGGTTGCTGTC+GGG | - | chr8_2:44924510-44924529 | Msa1249780:CDS | 65.0% | |
| GGAGCTGGTTGCTGTCGGGT+CGG | - | chr8_2:44924514-44924533 | Msa1249780:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 44924392 | 44930098 | 44924392 | ID=Msa1249780;Name=Msa1249780 |
| chr8_2 | mRNA | 44924392 | 44930098 | 44924392 | ID=Msa1249780-mRNA-1;Parent=Msa1249780;Name=Msa1249780-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.5|0.28|1|0.83|0.85|7|0|271 |
| chr8_2 | exon | 44929890 | 44930098 | 44929890 | ID=Msa1249780-mRNA-1:exon:13599;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44928282 | 44928330 | 44928282 | ID=Msa1249780-mRNA-1:exon:13598;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44927252 | 44927368 | 44927252 | ID=Msa1249780-mRNA-1:exon:13597;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44927057 | 44927110 | 44927057 | ID=Msa1249780-mRNA-1:exon:13596;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44925803 | 44925888 | 44925803 | ID=Msa1249780-mRNA-1:exon:13595;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44925254 | 44925360 | 44925254 | ID=Msa1249780-mRNA-1:exon:13594;Parent=Msa1249780-mRNA-1 |
| chr8_2 | exon | 44924392 | 44924585 | 44924392 | ID=Msa1249780-mRNA-1:exon:13593;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44929890 | 44930098 | 44929890 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44928282 | 44928330 | 44928282 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44927252 | 44927368 | 44927252 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44927057 | 44927110 | 44927057 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44925803 | 44925888 | 44925803 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44925254 | 44925360 | 44925254 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| chr8_2 | CDS | 44924392 | 44924585 | 44924392 | ID=Msa1249780-mRNA-1:cds;Parent=Msa1249780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
