Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250410 | XP_003608591.1 | 75.389 | 321 | 36 | 8 | 3 | 286 | 14 | 328 | 3.13e-157 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250410 | sp|Q9T072|BH025_ARATH | 38.776 | 245 | 104 | 8 | 85 | 286 | 87 | 328 | 6.57e-39 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250410 | G7JGD5 | 75.389 | 321 | 36 | 8 | 3 | 286 | 14 | 328 | 1.49e-157 | 451 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1250410 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1250410 | Msa1340600 | 0.814197 | 1.741241e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250410 | MtrunA17_Chr4g0054551 | 75.389 | 321 | 36 | 8 | 3 | 286 | 14 | 328 | 2.88e-161 | 451 |
| Msa1250410 | MtrunA17_Chr4g0054561 | 75.078 | 321 | 37 | 8 | 3 | 286 | 14 | 328 | 1.49e-160 | 449 |
| Msa1250410 | MtrunA17_Chr5g0400671 | 37.685 | 337 | 122 | 11 | 5 | 282 | 15 | 322 | 2.05e-50 | 169 |
| Msa1250410 | MtrunA17_Chr4g0049331 | 41.475 | 217 | 94 | 7 | 102 | 286 | 95 | 310 | 1.64e-37 | 134 |
| Msa1250410 | MtrunA17_Chr5g0400661 | 40.426 | 188 | 70 | 3 | 136 | 282 | 147 | 333 | 3.31e-36 | 132 |
| Msa1250410 | MtrunA17_Chr2g0280161 | 41.579 | 190 | 74 | 4 | 118 | 278 | 164 | 345 | 5.66e-36 | 132 |
| Msa1250410 | MtrunA17_Chr6g0468491 | 36.122 | 263 | 146 | 8 | 31 | 285 | 41 | 289 | 4.38e-35 | 128 |
| Msa1250410 | MtrunA17_Chr4g0054581 | 36.885 | 244 | 99 | 10 | 73 | 278 | 143 | 369 | 3.31e-34 | 127 |
| Msa1250410 | MtrunA17_Chr8g0336681 | 38.503 | 187 | 79 | 4 | 131 | 282 | 149 | 334 | 4.17e-34 | 126 |
| Msa1250410 | MtrunA17_Chr5g0400621 | 46.104 | 154 | 71 | 3 | 137 | 281 | 156 | 306 | 1.60e-33 | 125 |
| Msa1250410 | MtrunA17_Chr5g0400641 | 43.919 | 148 | 75 | 3 | 141 | 281 | 1 | 147 | 1.34e-32 | 117 |
| Msa1250410 | MtrunA17_Chr4g0033391 | 40.782 | 179 | 76 | 5 | 135 | 286 | 144 | 319 | 3.30e-32 | 121 |
| Msa1250410 | MtrunA17_Chr2g0307141 | 42.138 | 159 | 79 | 5 | 136 | 285 | 181 | 335 | 9.14e-32 | 120 |
| Msa1250410 | MtrunA17_Chr4g0054571 | 40.865 | 208 | 87 | 8 | 82 | 261 | 87 | 286 | 1.12e-31 | 120 |
| Msa1250410 | MtrunA17_Chr2g0307131 | 43.949 | 157 | 79 | 4 | 136 | 285 | 177 | 331 | 1.27e-31 | 120 |
| Msa1250410 | MtrunA17_Chr4g0054621 | 39.106 | 179 | 87 | 3 | 121 | 278 | 155 | 332 | 1.93e-31 | 119 |
| Msa1250410 | MtrunA17_Chr7g0225901 | 45.522 | 134 | 65 | 4 | 135 | 261 | 85 | 217 | 2.33e-31 | 117 |
| Msa1250410 | MtrunA17_Chr2g0333621 | 41.053 | 190 | 78 | 5 | 124 | 282 | 124 | 310 | 4.14e-31 | 118 |
| Msa1250410 | MtrunA17_Chr4g0002801 | 39.286 | 196 | 83 | 7 | 121 | 282 | 136 | 329 | 1.98e-29 | 114 |
| Msa1250410 | MtrunA17_Chr4g0033291 | 38.378 | 185 | 88 | 4 | 123 | 282 | 140 | 323 | 1.12e-28 | 112 |
| Msa1250410 | MtrunA17_Chr4g0002781 | 38.587 | 184 | 81 | 5 | 130 | 282 | 166 | 348 | 1.94e-27 | 108 |
| Msa1250410 | MtrunA17_Chr4g0033281 | 44.444 | 144 | 76 | 2 | 121 | 261 | 136 | 278 | 2.17e-25 | 103 |
| Msa1250410 | MtrunA17_Chr2g0333641 | 37.500 | 184 | 90 | 5 | 124 | 282 | 123 | 306 | 9.05e-25 | 100 |
| Msa1250410 | MtrunA17_Chr7g0249811 | 48.696 | 115 | 57 | 1 | 129 | 243 | 156 | 268 | 5.75e-23 | 96.7 |
| Msa1250410 | MtrunA17_Chr6g0468461 | 30.544 | 239 | 130 | 6 | 46 | 281 | 103 | 308 | 4.84e-22 | 94.4 |
| Msa1250410 | MtrunA17_Chr2g0333611 | 33.149 | 181 | 94 | 4 | 131 | 285 | 38 | 217 | 1.71e-21 | 90.1 |
| Msa1250410 | MtrunA17_Chr2g0333541 | 35.714 | 182 | 84 | 5 | 131 | 281 | 87 | 266 | 3.33e-18 | 82.4 |
| Msa1250410 | MtrunA17_Chr8g0346161 | 30.719 | 153 | 94 | 4 | 138 | 278 | 291 | 443 | 1.65e-17 | 82.0 |
| Msa1250410 | MtrunA17_Chr1g0185621 | 53.125 | 64 | 28 | 1 | 138 | 201 | 475 | 536 | 9.42e-15 | 74.3 |
| Msa1250410 | MtrunA17_Chr5g0411341 | 32.450 | 151 | 74 | 6 | 138 | 263 | 493 | 640 | 4.07e-14 | 72.4 |
| Msa1250410 | MtrunA17_Chr7g0275821 | 34.615 | 104 | 67 | 1 | 138 | 241 | 252 | 354 | 5.47e-14 | 71.6 |
| Msa1250410 | MtrunA17_Chr8g0366751 | 31.410 | 156 | 88 | 4 | 138 | 275 | 462 | 616 | 7.72e-14 | 71.6 |
| Msa1250410 | MtrunA17_Chr7g0260841 | 37.736 | 106 | 45 | 3 | 138 | 241 | 355 | 441 | 2.20e-13 | 70.1 |
| Msa1250410 | MtrunA17_Chr8g0346151 | 32.456 | 114 | 66 | 2 | 138 | 240 | 279 | 392 | 3.60e-13 | 69.3 |
| Msa1250410 | MtrunA17_Chr8g0386921 | 41.791 | 67 | 39 | 0 | 135 | 201 | 403 | 469 | 7.90e-12 | 65.5 |
| Msa1250410 | MtrunA17_Chr8g0365711 | 30.070 | 143 | 87 | 4 | 113 | 243 | 220 | 361 | 3.39e-11 | 63.2 |
| Msa1250410 | MtrunA17_Chr4g0028071 | 28.462 | 130 | 76 | 3 | 140 | 257 | 151 | 275 | 7.06e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250410 | AT4G37850.2 | 38.776 | 245 | 104 | 8 | 85 | 286 | 87 | 328 | 6.68e-40 | 142 |
| Msa1250410 | AT4G37850.1 | 38.776 | 245 | 104 | 8 | 85 | 286 | 87 | 328 | 6.68e-40 | 142 |
| Msa1250410 | AT2G22760.2 | 46.988 | 166 | 76 | 5 | 131 | 286 | 112 | 275 | 4.98e-36 | 130 |
| Msa1250410 | AT2G22760.1 | 43.575 | 179 | 70 | 6 | 131 | 278 | 112 | 290 | 3.11e-35 | 129 |
| Msa1250410 | AT2G22770.1 | 46.341 | 164 | 59 | 5 | 131 | 269 | 125 | 284 | 2.74e-32 | 121 |
| Msa1250410 | AT2G22750.1 | 43.541 | 209 | 87 | 8 | 86 | 269 | 66 | 268 | 6.96e-32 | 120 |
| Msa1250410 | AT2G22750.2 | 43.541 | 209 | 87 | 8 | 86 | 269 | 66 | 268 | 7.25e-32 | 120 |
| Msa1250410 | AT2G22750.4 | 39.754 | 244 | 97 | 9 | 86 | 285 | 94 | 331 | 8.89e-32 | 120 |
| Msa1250410 | AT2G22750.3 | 43.541 | 209 | 87 | 8 | 86 | 269 | 94 | 296 | 1.07e-31 | 120 |
| Msa1250410 | AT2G22750.5 | 43.541 | 209 | 87 | 8 | 86 | 269 | 90 | 292 | 1.34e-31 | 120 |
| Msa1250410 | AT1G01260.1 | 29.060 | 234 | 130 | 8 | 16 | 241 | 316 | 521 | 3.28e-16 | 79.0 |
| Msa1250410 | AT1G01260.2 | 29.060 | 234 | 130 | 8 | 16 | 241 | 316 | 521 | 3.28e-16 | 79.0 |
| Msa1250410 | AT1G01260.3 | 29.060 | 234 | 130 | 8 | 16 | 241 | 316 | 521 | 3.28e-16 | 79.0 |
| Msa1250410 | AT1G32640.1 | 38.849 | 139 | 71 | 7 | 138 | 263 | 452 | 589 | 3.67e-16 | 79.0 |
| Msa1250410 | AT2G46510.1 | 37.500 | 104 | 50 | 2 | 138 | 239 | 395 | 485 | 1.25e-15 | 77.0 |
| Msa1250410 | AT4G17880.1 | 33.113 | 151 | 81 | 5 | 138 | 275 | 416 | 559 | 6.61e-14 | 72.0 |
| Msa1250410 | AT4G09820.1 | 33.929 | 112 | 61 | 3 | 131 | 242 | 356 | 454 | 3.91e-12 | 66.6 |
| Msa1250410 | AT4G16430.1 | 41.772 | 79 | 42 | 1 | 119 | 193 | 297 | 375 | 4.06e-12 | 66.6 |
| Msa1250410 | AT1G63650.3 | 44.068 | 59 | 33 | 0 | 133 | 191 | 400 | 458 | 7.77e-12 | 65.9 |
| Msa1250410 | AT1G63650.1 | 44.068 | 59 | 33 | 0 | 133 | 191 | 400 | 458 | 7.77e-12 | 65.9 |
| Msa1250410 | AT1G63650.2 | 44.068 | 59 | 33 | 0 | 133 | 191 | 400 | 458 | 7.77e-12 | 65.9 |
| Msa1250410 | AT4G29930.5 | 33.333 | 108 | 65 | 3 | 139 | 243 | 55 | 158 | 1.12e-11 | 63.5 |
| Msa1250410 | AT4G29930.2 | 33.333 | 108 | 65 | 3 | 139 | 243 | 55 | 158 | 1.57e-11 | 63.2 |
| Msa1250410 | AT4G29930.4 | 41.791 | 67 | 37 | 1 | 140 | 206 | 56 | 120 | 2.31e-11 | 62.0 |
| Msa1250410 | AT4G29930.6 | 33.333 | 111 | 64 | 4 | 139 | 243 | 55 | 161 | 2.91e-11 | 62.4 |
| Msa1250410 | AT5G67110.1 | 39.130 | 92 | 48 | 3 | 105 | 190 | 60 | 149 | 3.04e-11 | 62.0 |
| Msa1250410 | AT4G29930.1 | 41.176 | 68 | 38 | 1 | 139 | 206 | 55 | 120 | 4.04e-11 | 62.4 |
| Msa1250410 | AT4G29930.3 | 41.176 | 68 | 38 | 1 | 139 | 206 | 55 | 120 | 4.40e-11 | 62.4 |
| Msa1250410 | AT4G29930.7 | 41.176 | 68 | 38 | 1 | 139 | 206 | 55 | 120 | 4.40e-11 | 62.4 |
| Msa1250410 | AT5G57150.3 | 31.579 | 133 | 72 | 4 | 136 | 252 | 53 | 182 | 6.33e-11 | 61.2 |
| Msa1250410 | AT5G57150.2 | 31.579 | 133 | 72 | 4 | 136 | 252 | 53 | 182 | 6.84e-11 | 61.2 |
| Msa1250410 | AT5G46830.1 | 31.206 | 141 | 76 | 5 | 138 | 263 | 343 | 477 | 7.02e-11 | 62.8 |
| Msa1250410 | AT5G57150.5 | 31.579 | 133 | 72 | 4 | 136 | 252 | 52 | 181 | 7.60e-11 | 61.2 |
| Msa1250410 | AT5G57150.1 | 31.579 | 133 | 72 | 4 | 136 | 252 | 52 | 181 | 8.66e-11 | 61.2 |
| Msa1250410 | AT5G57150.4 | 31.579 | 133 | 72 | 4 | 136 | 252 | 53 | 182 | 8.98e-11 | 61.6 |
| Msa1250410 | AT2G16910.1 | 50.000 | 56 | 28 | 0 | 139 | 194 | 315 | 370 | 9.42e-11 | 62.8 |
Find 49 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGAAGCAAGGGTTTC+TGG | 0.149381 | 8_2:-45977561 | Msa1250410:CDS |
| TGCATTTCAGTTTGATGATA+TGG | 0.178721 | 8_2:-45978386 | Msa1250410:CDS |
| GATGGACAAGGCAACTATTT+TGG | 0.186609 | 8_2:-45977748 | Msa1250410:CDS |
| TTTGAATTAACAGGGATTAA+TGG | 0.241351 | 8_2:-45978455 | Msa1250410:intron |
| GCTCTTTCATCTCTTCTTCC+TGG | 0.251328 | 8_2:-45977950 | Msa1250410:CDS |
| TTCACCTTTGCATCCATGTT+TGG | 0.279378 | 8_2:+45978151 | None:intergenic |
| TCTTCTTCCTGGACTCAAAA+AGG | 0.317343 | 8_2:-45977939 | Msa1250410:intron |
| AGAATTGTTCTGTGTGCTTT+CGG | 0.323320 | 8_2:+45978279 | None:intergenic |
| AGAATATTGCTTGACAATAA+AGG | 0.327738 | 8_2:-45976999 | Msa1250410:CDS |
| TATGGAGAAAACTTGAATTT+CGG | 0.349571 | 8_2:-45978106 | Msa1250410:CDS |
| TGTAAATAGAAACCCTATTC+AGG | 0.354615 | 8_2:-45978032 | Msa1250410:CDS |
| ACATGATCTTGAGCCTGAAT+AGG | 0.366395 | 8_2:+45978019 | None:intergenic |
| CATGATCTTGAGCCTGAATA+GGG | 0.371001 | 8_2:+45978020 | None:intergenic |
| TCGCTTGTTGTTGATGTTGT+TGG | 0.394714 | 8_2:+45978309 | None:intergenic |
| TTGACCAGGACTACTTTCAA+TGG | 0.436916 | 8_2:+45978252 | None:intergenic |
| ATGAAAGAGCAATGAATCTC+TGG | 0.443321 | 8_2:+45977963 | None:intergenic |
| TGACCAGGACTACTTTCAAT+GGG | 0.452873 | 8_2:+45978253 | None:intergenic |
| TGAGTATTGCGGTCGCAGTT+CGG | 0.460089 | 8_2:+45977496 | None:intergenic |
| CAGCAGCAACCTTGTTCTCT+CGG | 0.463262 | 8_2:+45978053 | None:intergenic |
| TTCCCCATTGAAAGTAGTCC+TGG | 0.464737 | 8_2:-45978256 | Msa1250410:intron |
| AAGAAGCCTAAAACTGAGAT+CGG | 0.487088 | 8_2:-45978130 | Msa1250410:CDS |
| CCTAAAACTGAGATCGGGTA+TGG | 0.488086 | 8_2:-45978124 | Msa1250410:CDS |
| GGAACGAGTGAAGACTTTAG+AGG | 0.491147 | 8_2:-45977694 | Msa1250410:CDS |
| TAATGATTATGAGTACCCTA+TGG | 0.498020 | 8_2:-45978416 | Msa1250410:CDS |
| TGGTTCAAAAGAAATGATCT+TGG | 0.499628 | 8_2:+45978171 | None:intergenic |
| AGGAATAAGTACTCTCTTGT+GGG | 0.507070 | 8_2:+45978338 | None:intergenic |
| TCAGGCTCAAGATCATGTTA+TGG | 0.510343 | 8_2:-45978014 | Msa1250410:CDS |
| ACTTCCGAAAATTGAAGCAA+GGG | 0.522336 | 8_2:-45977568 | Msa1250410:CDS |
| TCTCGTAAGGAGCATAAGTC+AGG | 0.525482 | 8_2:-45976975 | Msa1250410:CDS |
| TGAAATGCAGATGAATCCAT+AGG | 0.526233 | 8_2:+45978400 | None:intergenic |
| CACTTCCGAAAATTGAAGCA+AGG | 0.531807 | 8_2:-45977569 | Msa1250410:CDS |
| TGTTCTGTGTGCTTTCGGAA+TGG | 0.533620 | 8_2:+45978284 | None:intergenic |
| GTTGATGTTGTTGGTATGAG+AGG | 0.543066 | 8_2:+45978318 | None:intergenic |
| GAGGAATAAGTACTCTCTTG+TGG | 0.546666 | 8_2:+45978337 | None:intergenic |
| AGAAGCCTAAAACTGAGATC+GGG | 0.557163 | 8_2:-45978129 | Msa1250410:CDS |
| TGAACCAAACATGGATGCAA+AGG | 0.563886 | 8_2:-45978155 | Msa1250410:CDS |
| AAAACATATGAAGCAACTAC+AGG | 0.565504 | 8_2:-45977715 | Msa1250410:CDS |
| ATCCATTGTGACAAATATTG+TGG | 0.568305 | 8_2:-45977519 | Msa1250410:CDS |
| TTCTAATTCGATGAGTATTG+CGG | 0.578276 | 8_2:+45977485 | None:intergenic |
| GGCCACAATATTTGTCACAA+TGG | 0.583000 | 8_2:+45977517 | None:intergenic |
| TGACAATAAAGGATCTCGTA+AGG | 0.599743 | 8_2:-45976988 | Msa1250410:CDS |
| GAAATGCAGATGAATCCATA+GGG | 0.600361 | 8_2:+45978401 | None:intergenic |
| TTATTATAACCGAGAGAACA+AGG | 0.606925 | 8_2:-45978062 | Msa1250410:CDS |
| GAATTAACAGGGATTAATGG+AGG | 0.608513 | 8_2:-45978452 | Msa1250410:intron |
| GGAATAAGTACTCTCTTGTG+GGG | 0.633544 | 8_2:+45978339 | None:intergenic |
| ACTTTGCATGCAGATGGACA+AGG | 0.646531 | 8_2:-45977760 | Msa1250410:intron |
| TATGGCAGAAAGAAGACGAA+GGG | 0.657033 | 8_2:-45977996 | Msa1250410:CDS |
| TTATGGCAGAAAGAAGACGA+AGG | 0.702887 | 8_2:-45977997 | Msa1250410:CDS |
| GACCAGGACTACTTTCAATG+GGG | 0.715740 | 8_2:+45978254 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATCTAATAAATTTATTATT+TGG | - | chr8_2:45977091-45977110 | Msa1250410:intron | 10.0% |
| !! | TTAATTCAAAGAAAAAAAAA+AGG | + | chr8_2:45977784-45977803 | None:intergenic | 10.0% |
| !!! | AAGTTTTAAAAATTTTAAGT+TGG | + | chr8_2:45978993-45979012 | None:intergenic | 10.0% |
| !! | CATCTAATAAATTTATTATT+TGG | - | chr8_2:45977091-45977110 | Msa1250410:intron | 10.0% |
| !! | TTAATTCAAAGAAAAAAAAA+AGG | + | chr8_2:45977784-45977803 | None:intergenic | 10.0% |
| !!! | AAGTTTTAAAAATTTTAAGT+TGG | + | chr8_2:45978993-45979012 | None:intergenic | 10.0% |
| !!! | TAGAATTTAGAATTTTTGTA+TGG | + | chr8_2:45977754-45977773 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTTGAATTAAC+AGG | - | chr8_2:45977785-45977804 | Msa1250410:intron | 15.0% |
| !!! | TTTTTTTCTTTGAATTAACA+GGG | - | chr8_2:45977786-45977805 | Msa1250410:intron | 15.0% |
| !!! | ATTTTAATTAGGTTTTAAGT+TGG | + | chr8_2:45979021-45979040 | None:intergenic | 15.0% |
| !!! | CAGATTTTATTTAATTTTCA+TGG | - | chr8_2:45979197-45979216 | Msa1250410:intron | 15.0% |
| !!! | TAGAATTTAGAATTTTTGTA+TGG | + | chr8_2:45977754-45977773 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTTGAATTAAC+AGG | - | chr8_2:45977785-45977804 | Msa1250410:intron | 15.0% |
| !!! | TTTTTTTCTTTGAATTAACA+GGG | - | chr8_2:45977786-45977805 | Msa1250410:intron | 15.0% |
| !!! | ATTTTAATTAGGTTTTAAGT+TGG | + | chr8_2:45979021-45979040 | None:intergenic | 15.0% |
| !!! | CAGATTTTATTTAATTTTCA+TGG | - | chr8_2:45979197-45979216 | Msa1250410:intron | 15.0% |
| !!! | CCTCTGATAATATTTTTTAA+AGG | + | chr8_2:45977117-45977136 | None:intergenic | 20.0% |
| !!! | CCTTTAAAAAATATTATCAG+AGG | - | chr8_2:45977114-45977133 | Msa1250410:intron | 20.0% |
| !!! | TTTGCATTTCATTGATTATT+TGG | - | chr8_2:45977450-45977469 | Msa1250410:intron | 20.0% |
| !! | GAAAATTAAGTCAAACAATT+AGG | + | chr8_2:45977476-45977495 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAAGTTTCTAGT+TGG | - | chr8_2:45978934-45978953 | Msa1250410:intron | 20.0% |
| !!! | CTCTTATGATCATTTTAATT+AGG | + | chr8_2:45979032-45979051 | None:intergenic | 20.0% |
| !! | TCATGTTGATATATTCTATT+TGG | - | chr8_2:45979103-45979122 | Msa1250410:intron | 20.0% |
| !!! | CCTCTGATAATATTTTTTAA+AGG | + | chr8_2:45977117-45977136 | None:intergenic | 20.0% |
| !!! | CCTTTAAAAAATATTATCAG+AGG | - | chr8_2:45977114-45977133 | Msa1250410:intron | 20.0% |
| !!! | TTTGCATTTCATTGATTATT+TGG | - | chr8_2:45977450-45977469 | Msa1250410:intron | 20.0% |
| !! | GAAAATTAAGTCAAACAATT+AGG | + | chr8_2:45977476-45977495 | None:intergenic | 20.0% |
| !!! | GTTTATTTTAAGTTTCTAGT+TGG | - | chr8_2:45978934-45978953 | Msa1250410:intron | 20.0% |
| !!! | CTCTTATGATCATTTTAATT+AGG | + | chr8_2:45979032-45979051 | None:intergenic | 20.0% |
| !! | TCATGTTGATATATTCTATT+TGG | - | chr8_2:45979103-45979122 | Msa1250410:intron | 20.0% |
| ! | TTACTGTGTAAATCTATTTC+TGG | - | chr8_2:45977056-45977075 | Msa1250410:intron | 25.0% |
| !! | ATATGATTTCCCATTTTCTA+GGG | + | chr8_2:45977253-45977272 | None:intergenic | 25.0% |
| !! | AATATGATTTCCCATTTTCT+AGG | + | chr8_2:45977254-45977273 | None:intergenic | 25.0% |
| ! | AACTATTGGATATATGAGAA+GGG | + | chr8_2:45977425-45977444 | None:intergenic | 25.0% |
| ! | AAACTATTGGATATATGAGA+AGG | + | chr8_2:45977426-45977445 | None:intergenic | 25.0% |
| ! | AAATGCAAAGTCTAAACTAT+TGG | + | chr8_2:45977439-45977458 | None:intergenic | 25.0% |
| ! | TGTTGTATACTTACAAATTC+AGG | + | chr8_2:45977561-45977580 | None:intergenic | 25.0% |
| ! | CAACATATATAGTGTATGTT+TGG | - | chr8_2:45977576-45977595 | Msa1250410:CDS | 25.0% |
| ! | TTTGAATTAACAGGGATTAA+TGG | - | chr8_2:45977794-45977813 | Msa1250410:intron | 25.0% |
| ! | TATGGAGAAAACTTGAATTT+CGG | - | chr8_2:45978143-45978162 | Msa1250410:CDS | 25.0% |
| ! | TGTTAGTATAGTTGCAATTT+AGG | - | chr8_2:45978408-45978427 | Msa1250410:CDS | 25.0% |
| !! | GATATTATGGTTTTCAATTG+CGG | + | chr8_2:45978441-45978460 | None:intergenic | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_2:45978826-45978845 | None:intergenic | 25.0% |
| !! | TTTCAAAGTGAGTAATGTTT+TGG | - | chr8_2:45978966-45978985 | Msa1250410:intron | 25.0% |
| !! | TAAGCCTCTATATTTTATCT+CGG | - | chr8_2:45979162-45979181 | Msa1250410:intron | 25.0% |
| !! | TTTTCCGAGATAAAATATAG+AGG | + | chr8_2:45979169-45979188 | None:intergenic | 25.0% |
| ! | AGAATATTGCTTGACAATAA+AGG | - | chr8_2:45979250-45979269 | Msa1250410:intron | 25.0% |
| ! | TTACTGTGTAAATCTATTTC+TGG | - | chr8_2:45977056-45977075 | Msa1250410:intron | 25.0% |
| !! | ATATGATTTCCCATTTTCTA+GGG | + | chr8_2:45977253-45977272 | None:intergenic | 25.0% |
| !! | AATATGATTTCCCATTTTCT+AGG | + | chr8_2:45977254-45977273 | None:intergenic | 25.0% |
| ! | AACTATTGGATATATGAGAA+GGG | + | chr8_2:45977425-45977444 | None:intergenic | 25.0% |
| ! | AAACTATTGGATATATGAGA+AGG | + | chr8_2:45977426-45977445 | None:intergenic | 25.0% |
| ! | AAATGCAAAGTCTAAACTAT+TGG | + | chr8_2:45977439-45977458 | None:intergenic | 25.0% |
| ! | TGTTGTATACTTACAAATTC+AGG | + | chr8_2:45977561-45977580 | None:intergenic | 25.0% |
| ! | CAACATATATAGTGTATGTT+TGG | - | chr8_2:45977576-45977595 | Msa1250410:CDS | 25.0% |
| ! | TTTGAATTAACAGGGATTAA+TGG | - | chr8_2:45977794-45977813 | Msa1250410:intron | 25.0% |
| ! | TATGGAGAAAACTTGAATTT+CGG | - | chr8_2:45978143-45978162 | Msa1250410:CDS | 25.0% |
| ! | TGTTAGTATAGTTGCAATTT+AGG | - | chr8_2:45978408-45978427 | Msa1250410:CDS | 25.0% |
| !! | GATATTATGGTTTTCAATTG+CGG | + | chr8_2:45978441-45978460 | None:intergenic | 25.0% |
| !! | TCAAGATAGTTATTTCCAAA+TGG | + | chr8_2:45978826-45978845 | None:intergenic | 25.0% |
| !! | TTTCAAAGTGAGTAATGTTT+TGG | - | chr8_2:45978966-45978985 | Msa1250410:intron | 25.0% |
| !! | TAAGCCTCTATATTTTATCT+CGG | - | chr8_2:45979162-45979181 | Msa1250410:intron | 25.0% |
| !! | TTTTCCGAGATAAAATATAG+AGG | + | chr8_2:45979169-45979188 | None:intergenic | 25.0% |
| ! | AGAATATTGCTTGACAATAA+AGG | - | chr8_2:45979250-45979269 | Msa1250410:intron | 25.0% |
| !! | AAGTTAGTCTTCTACAAACA+TGG | - | chr8_2:45976978-45976997 | Msa1250410:CDS | 30.0% |
| TCAAAACATACCCTAGAAAA+TGG | - | chr8_2:45977240-45977259 | Msa1250410:intron | 30.0% | |
| CAAAACATACCCTAGAAAAT+GGG | - | chr8_2:45977241-45977260 | Msa1250410:intron | 30.0% | |
| TTTGGATTTGCAAAGAGATT+CGG | - | chr8_2:45977594-45977613 | Msa1250410:CDS | 30.0% | |
| TAATGATTATGAGTACCCTA+TGG | - | chr8_2:45977833-45977852 | Msa1250410:intron | 30.0% | |
| ! | TGCATTTCAGTTTGATGATA+TGG | - | chr8_2:45977863-45977882 | Msa1250410:intron | 30.0% |
| TGGTTCAAAAGAAATGATCT+TGG | + | chr8_2:45978081-45978100 | None:intergenic | 30.0% | |
| ! | CATTTCTTTTGAACCAAACA+TGG | - | chr8_2:45978085-45978104 | Msa1250410:intron | 30.0% |
| TTATTATAACCGAGAGAACA+AGG | - | chr8_2:45978187-45978206 | Msa1250410:CDS | 30.0% | |
| TGTAAATAGAAACCCTATTC+AGG | - | chr8_2:45978217-45978236 | Msa1250410:CDS | 30.0% | |
| CTACTTGATAGAGGATATTA+TGG | + | chr8_2:45978454-45978473 | None:intergenic | 30.0% | |
| TGGTTAATACTACTTGATAG+AGG | + | chr8_2:45978463-45978482 | None:intergenic | 30.0% | |
| AAAACATATGAAGCAACTAC+AGG | - | chr8_2:45978534-45978553 | Msa1250410:intron | 30.0% | |
| !!! | AGCTGATTCGACTTTTTTAT+TGG | + | chr8_2:45978590-45978609 | None:intergenic | 30.0% |
| ATCCATTGTGACAAATATTG+TGG | - | chr8_2:45978730-45978749 | Msa1250410:intron | 30.0% | |
| ! | TTCTAATTCGATGAGTATTG+CGG | + | chr8_2:45978767-45978786 | None:intergenic | 30.0% |
| TGATATAACAATTGTTGCTC+AGG | - | chr8_2:45978843-45978862 | Msa1250410:intron | 30.0% | |
| !! | TTACTCACTTTGAAACAAGT+TGG | + | chr8_2:45978961-45978980 | None:intergenic | 30.0% |
| AACTAGGCTAGAACATAAAA+TGG | + | chr8_2:45979056-45979075 | None:intergenic | 30.0% | |
| CATGAACAAAGAATTCTACT+CGG | + | chr8_2:45979088-45979107 | None:intergenic | 30.0% | |
| !! | AAGTTAGTCTTCTACAAACA+TGG | - | chr8_2:45976978-45976997 | Msa1250410:CDS | 30.0% |
| TCAAAACATACCCTAGAAAA+TGG | - | chr8_2:45977240-45977259 | Msa1250410:intron | 30.0% | |
| CAAAACATACCCTAGAAAAT+GGG | - | chr8_2:45977241-45977260 | Msa1250410:intron | 30.0% | |
| TTTGGATTTGCAAAGAGATT+CGG | - | chr8_2:45977594-45977613 | Msa1250410:CDS | 30.0% | |
| TAATGATTATGAGTACCCTA+TGG | - | chr8_2:45977833-45977852 | Msa1250410:intron | 30.0% | |
| ! | TGCATTTCAGTTTGATGATA+TGG | - | chr8_2:45977863-45977882 | Msa1250410:intron | 30.0% |
| TGGTTCAAAAGAAATGATCT+TGG | + | chr8_2:45978081-45978100 | None:intergenic | 30.0% | |
| ! | CATTTCTTTTGAACCAAACA+TGG | - | chr8_2:45978085-45978104 | Msa1250410:intron | 30.0% |
| TTATTATAACCGAGAGAACA+AGG | - | chr8_2:45978187-45978206 | Msa1250410:CDS | 30.0% | |
| TGTAAATAGAAACCCTATTC+AGG | - | chr8_2:45978217-45978236 | Msa1250410:CDS | 30.0% | |
| CTACTTGATAGAGGATATTA+TGG | + | chr8_2:45978454-45978473 | None:intergenic | 30.0% | |
| TGGTTAATACTACTTGATAG+AGG | + | chr8_2:45978463-45978482 | None:intergenic | 30.0% | |
| AAAACATATGAAGCAACTAC+AGG | - | chr8_2:45978534-45978553 | Msa1250410:intron | 30.0% | |
| !!! | AGCTGATTCGACTTTTTTAT+TGG | + | chr8_2:45978590-45978609 | None:intergenic | 30.0% |
| ATCCATTGTGACAAATATTG+TGG | - | chr8_2:45978730-45978749 | Msa1250410:intron | 30.0% | |
| ! | TTCTAATTCGATGAGTATTG+CGG | + | chr8_2:45978767-45978786 | None:intergenic | 30.0% |
| TGATATAACAATTGTTGCTC+AGG | - | chr8_2:45978843-45978862 | Msa1250410:intron | 30.0% | |
| !! | TTACTCACTTTGAAACAAGT+TGG | + | chr8_2:45978961-45978980 | None:intergenic | 30.0% |
| AACTAGGCTAGAACATAAAA+TGG | + | chr8_2:45979056-45979075 | None:intergenic | 30.0% | |
| CATGAACAAAGAATTCTACT+CGG | + | chr8_2:45979088-45979107 | None:intergenic | 30.0% | |
| TCTACAAACATGGTGAATCA+AGG | - | chr8_2:45976988-45977007 | Msa1250410:CDS | 35.0% | |
| !! | AAGAGGAGGTGGTTTAATTT+TGG | - | chr8_2:45977014-45977033 | Msa1250410:intron | 35.0% |
| GAGGTGTACACATTTCAAAA+CGG | - | chr8_2:45977133-45977152 | Msa1250410:intron | 35.0% | |
| !! | AGGGTATGTTTTGAATGTGA+CGG | + | chr8_2:45977234-45977253 | None:intergenic | 35.0% |
| TAGAACAACACGTTTATACC+CGG | + | chr8_2:45977304-45977323 | None:intergenic | 35.0% | |
| CAAGCTCTCTCTATAAAAAC+AGG | - | chr8_2:45977324-45977343 | Msa1250410:intron | 35.0% | |
| CTCTCTCTATAAAAACAGGT+TGG | - | chr8_2:45977328-45977347 | Msa1250410:intron | 35.0% | |
| TCTTGATCTATCTTCAACCA+AGG | - | chr8_2:45977396-45977415 | Msa1250410:intron | 35.0% | |
| ATATATGAGAAGGGTTACCT+TGG | + | chr8_2:45977416-45977435 | None:intergenic | 35.0% | |
| TACAAATTCAGGCATGTAGT+TGG | + | chr8_2:45977550-45977569 | None:intergenic | 35.0% | |
| GAATTAACAGGGATTAATGG+AGG | - | chr8_2:45977797-45977816 | Msa1250410:intron | 35.0% | |
| GAAATGCAGATGAATCCATA+GGG | + | chr8_2:45977851-45977870 | None:intergenic | 35.0% | |
| TGAAATGCAGATGAATCCAT+AGG | + | chr8_2:45977852-45977871 | None:intergenic | 35.0% | |
| AGGAATAAGTACTCTCTTGT+GGG | + | chr8_2:45977914-45977933 | None:intergenic | 35.0% | |
| AGAATTGTTCTGTGTGCTTT+CGG | + | chr8_2:45977973-45977992 | None:intergenic | 35.0% | |
| !!! | GACTTGAGTCTTAGTTTTGT+TGG | + | chr8_2:45978041-45978060 | None:intergenic | 35.0% |
| AAGAAGCCTAAAACTGAGAT+CGG | - | chr8_2:45978119-45978138 | Msa1250410:CDS | 35.0% | |
| ATGAAAGAGCAATGAATCTC+TGG | + | chr8_2:45978289-45978308 | None:intergenic | 35.0% | |
| !!! | ATTAGTACCTTTTTGAGTCC+AGG | + | chr8_2:45978320-45978339 | None:intergenic | 35.0% |
| ! | CTTCAATTTTCGGAAGTGAT+TGG | + | chr8_2:45978678-45978697 | None:intergenic | 35.0% |
| ACTTCCGAAAATTGAAGCAA+GGG | - | chr8_2:45978681-45978700 | Msa1250410:intron | 35.0% | |
| ! | GAAACCCTTGCTTCAATTTT+CGG | + | chr8_2:45978688-45978707 | None:intergenic | 35.0% |
| AAAATTGAAGCAAGGGTTTC+TGG | - | chr8_2:45978688-45978707 | Msa1250410:intron | 35.0% | |
| GCTTGTCTTAATTGCATGTT+TGG | - | chr8_2:45978899-45978918 | Msa1250410:intron | 35.0% | |
| TGACAATAAAGGATCTCGTA+AGG | - | chr8_2:45979261-45979280 | Msa1250410:intron | 35.0% | |
| TCTACAAACATGGTGAATCA+AGG | - | chr8_2:45976988-45977007 | Msa1250410:CDS | 35.0% | |
| !! | AAGAGGAGGTGGTTTAATTT+TGG | - | chr8_2:45977014-45977033 | Msa1250410:intron | 35.0% |
| GAGGTGTACACATTTCAAAA+CGG | - | chr8_2:45977133-45977152 | Msa1250410:intron | 35.0% | |
| !! | AGGGTATGTTTTGAATGTGA+CGG | + | chr8_2:45977234-45977253 | None:intergenic | 35.0% |
| TAGAACAACACGTTTATACC+CGG | + | chr8_2:45977304-45977323 | None:intergenic | 35.0% | |
| CAAGCTCTCTCTATAAAAAC+AGG | - | chr8_2:45977324-45977343 | Msa1250410:intron | 35.0% | |
| CTCTCTCTATAAAAACAGGT+TGG | - | chr8_2:45977328-45977347 | Msa1250410:intron | 35.0% | |
| TCTTGATCTATCTTCAACCA+AGG | - | chr8_2:45977396-45977415 | Msa1250410:intron | 35.0% | |
| ATATATGAGAAGGGTTACCT+TGG | + | chr8_2:45977416-45977435 | None:intergenic | 35.0% | |
| TACAAATTCAGGCATGTAGT+TGG | + | chr8_2:45977550-45977569 | None:intergenic | 35.0% | |
| GAATTAACAGGGATTAATGG+AGG | - | chr8_2:45977797-45977816 | Msa1250410:intron | 35.0% | |
| GAAATGCAGATGAATCCATA+GGG | + | chr8_2:45977851-45977870 | None:intergenic | 35.0% | |
| TGAAATGCAGATGAATCCAT+AGG | + | chr8_2:45977852-45977871 | None:intergenic | 35.0% | |
| AGGAATAAGTACTCTCTTGT+GGG | + | chr8_2:45977914-45977933 | None:intergenic | 35.0% | |
| AGAATTGTTCTGTGTGCTTT+CGG | + | chr8_2:45977973-45977992 | None:intergenic | 35.0% | |
| !!! | GACTTGAGTCTTAGTTTTGT+TGG | + | chr8_2:45978041-45978060 | None:intergenic | 35.0% |
| AAGAAGCCTAAAACTGAGAT+CGG | - | chr8_2:45978119-45978138 | Msa1250410:CDS | 35.0% | |
| ATGAAAGAGCAATGAATCTC+TGG | + | chr8_2:45978289-45978308 | None:intergenic | 35.0% | |
| !!! | ATTAGTACCTTTTTGAGTCC+AGG | + | chr8_2:45978320-45978339 | None:intergenic | 35.0% |
| ! | CTTCAATTTTCGGAAGTGAT+TGG | + | chr8_2:45978678-45978697 | None:intergenic | 35.0% |
| ACTTCCGAAAATTGAAGCAA+GGG | - | chr8_2:45978681-45978700 | Msa1250410:intron | 35.0% | |
| ! | GAAACCCTTGCTTCAATTTT+CGG | + | chr8_2:45978688-45978707 | None:intergenic | 35.0% |
| AAAATTGAAGCAAGGGTTTC+TGG | - | chr8_2:45978688-45978707 | Msa1250410:intron | 35.0% | |
| GCTTGTCTTAATTGCATGTT+TGG | - | chr8_2:45978899-45978918 | Msa1250410:intron | 35.0% | |
| TGACAATAAAGGATCTCGTA+AGG | - | chr8_2:45979261-45979280 | Msa1250410:intron | 35.0% | |
| ATGGTGAATCAAGGTGTAAG+AGG | - | chr8_2:45976997-45977016 | Msa1250410:CDS | 40.0% | |
| GTACCCACAATTTGACCAAA+CGG | - | chr8_2:45977190-45977209 | Msa1250410:intron | 40.0% | |
| ACACCGTTTGGTCAAATTGT+GGG | + | chr8_2:45977196-45977215 | None:intergenic | 40.0% | |
| AACACCGTTTGGTCAAATTG+TGG | + | chr8_2:45977197-45977216 | None:intergenic | 40.0% | |
| ! | CCAAACGGTGTTAGTAAAGA+CGG | - | chr8_2:45977205-45977224 | Msa1250410:intron | 40.0% |
| ACACGTGCTTAATACAGAAC+CGG | - | chr8_2:45977282-45977301 | Msa1250410:intron | 40.0% | |
| AAATTCAGGCATGTAGTTGG+TGG | + | chr8_2:45977547-45977566 | None:intergenic | 40.0% | |
| GGAATAAGTACTCTCTTGTG+GGG | + | chr8_2:45977913-45977932 | None:intergenic | 40.0% | |
| GAGGAATAAGTACTCTCTTG+TGG | + | chr8_2:45977915-45977934 | None:intergenic | 40.0% | |
| GTTGATGTTGTTGGTATGAG+AGG | + | chr8_2:45977934-45977953 | None:intergenic | 40.0% | |
| !! | TCGCTTGTTGTTGATGTTGT+TGG | + | chr8_2:45977943-45977962 | None:intergenic | 40.0% |
| TGACCAGGACTACTTTCAAT+GGG | + | chr8_2:45977999-45978018 | None:intergenic | 40.0% | |
| TTGACCAGGACTACTTTCAA+TGG | + | chr8_2:45978000-45978019 | None:intergenic | 40.0% | |
| TGAACCAAACATGGATGCAA+AGG | - | chr8_2:45978094-45978113 | Msa1250410:intron | 40.0% | |
| TTCACCTTTGCATCCATGTT+TGG | + | chr8_2:45978101-45978120 | None:intergenic | 40.0% | |
| AGAAGCCTAAAACTGAGATC+GGG | - | chr8_2:45978120-45978139 | Msa1250410:CDS | 40.0% | |
| ! | TTCGGAAGTGTGATATCTCA+AGG | - | chr8_2:45978161-45978180 | Msa1250410:CDS | 40.0% |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_2:45978232-45978251 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_2:45978233-45978252 | None:intergenic | 40.0% | |
| TCAGGCTCAAGATCATGTTA+TGG | - | chr8_2:45978235-45978254 | Msa1250410:intron | 40.0% | |
| TTATGGCAGAAAGAAGACGA+AGG | - | chr8_2:45978252-45978271 | Msa1250410:intron | 40.0% | |
| TATGGCAGAAAGAAGACGAA+GGG | - | chr8_2:45978253-45978272 | Msa1250410:intron | 40.0% | |
| TCTTCTTCCTGGACTCAAAA+AGG | - | chr8_2:45978310-45978329 | Msa1250410:CDS | 40.0% | |
| TCTGCATGCAAAGTGAACAT+TGG | + | chr8_2:45978483-45978502 | None:intergenic | 40.0% | |
| ATGTTCACTTTGCATGCAGA+TGG | - | chr8_2:45978483-45978502 | Msa1250410:intron | 40.0% | |
| ! | GATGGACAAGGCAACTATTT+TGG | - | chr8_2:45978501-45978520 | Msa1250410:intron | 40.0% |
| CACTTCCGAAAATTGAAGCA+AGG | - | chr8_2:45978680-45978699 | Msa1250410:intron | 40.0% | |
| GGCCACAATATTTGTCACAA+TGG | + | chr8_2:45978735-45978754 | None:intergenic | 40.0% | |
| AGCAGTTCTACTTTGCCATT+TGG | - | chr8_2:45978808-45978827 | Msa1250410:intron | 40.0% | |
| TACTCGGCACAAGAAAAACT+AGG | + | chr8_2:45979072-45979091 | None:intergenic | 40.0% | |
| ATGGTGAATCAAGGTGTAAG+AGG | - | chr8_2:45976997-45977016 | Msa1250410:CDS | 40.0% | |
| GTACCCACAATTTGACCAAA+CGG | - | chr8_2:45977190-45977209 | Msa1250410:intron | 40.0% | |
| ACACCGTTTGGTCAAATTGT+GGG | + | chr8_2:45977196-45977215 | None:intergenic | 40.0% | |
| AACACCGTTTGGTCAAATTG+TGG | + | chr8_2:45977197-45977216 | None:intergenic | 40.0% | |
| ! | CCAAACGGTGTTAGTAAAGA+CGG | - | chr8_2:45977205-45977224 | Msa1250410:intron | 40.0% |
| ACACGTGCTTAATACAGAAC+CGG | - | chr8_2:45977282-45977301 | Msa1250410:intron | 40.0% | |
| AAATTCAGGCATGTAGTTGG+TGG | + | chr8_2:45977547-45977566 | None:intergenic | 40.0% | |
| GGAATAAGTACTCTCTTGTG+GGG | + | chr8_2:45977913-45977932 | None:intergenic | 40.0% | |
| GAGGAATAAGTACTCTCTTG+TGG | + | chr8_2:45977915-45977934 | None:intergenic | 40.0% | |
| GTTGATGTTGTTGGTATGAG+AGG | + | chr8_2:45977934-45977953 | None:intergenic | 40.0% | |
| !! | TCGCTTGTTGTTGATGTTGT+TGG | + | chr8_2:45977943-45977962 | None:intergenic | 40.0% |
| TGACCAGGACTACTTTCAAT+GGG | + | chr8_2:45977999-45978018 | None:intergenic | 40.0% | |
| TTGACCAGGACTACTTTCAA+TGG | + | chr8_2:45978000-45978019 | None:intergenic | 40.0% | |
| TGAACCAAACATGGATGCAA+AGG | - | chr8_2:45978094-45978113 | Msa1250410:intron | 40.0% | |
| TTCACCTTTGCATCCATGTT+TGG | + | chr8_2:45978101-45978120 | None:intergenic | 40.0% | |
| AGAAGCCTAAAACTGAGATC+GGG | - | chr8_2:45978120-45978139 | Msa1250410:CDS | 40.0% | |
| ! | TTCGGAAGTGTGATATCTCA+AGG | - | chr8_2:45978161-45978180 | Msa1250410:CDS | 40.0% |
| CATGATCTTGAGCCTGAATA+GGG | + | chr8_2:45978232-45978251 | None:intergenic | 40.0% | |
| ACATGATCTTGAGCCTGAAT+AGG | + | chr8_2:45978233-45978252 | None:intergenic | 40.0% | |
| TCAGGCTCAAGATCATGTTA+TGG | - | chr8_2:45978235-45978254 | Msa1250410:intron | 40.0% | |
| TTATGGCAGAAAGAAGACGA+AGG | - | chr8_2:45978252-45978271 | Msa1250410:intron | 40.0% | |
| TATGGCAGAAAGAAGACGAA+GGG | - | chr8_2:45978253-45978272 | Msa1250410:intron | 40.0% | |
| TCTTCTTCCTGGACTCAAAA+AGG | - | chr8_2:45978310-45978329 | Msa1250410:CDS | 40.0% | |
| TCTGCATGCAAAGTGAACAT+TGG | + | chr8_2:45978483-45978502 | None:intergenic | 40.0% | |
| ATGTTCACTTTGCATGCAGA+TGG | - | chr8_2:45978483-45978502 | Msa1250410:intron | 40.0% | |
| ! | GATGGACAAGGCAACTATTT+TGG | - | chr8_2:45978501-45978520 | Msa1250410:intron | 40.0% |
| CACTTCCGAAAATTGAAGCA+AGG | - | chr8_2:45978680-45978699 | Msa1250410:intron | 40.0% | |
| GGCCACAATATTTGTCACAA+TGG | + | chr8_2:45978735-45978754 | None:intergenic | 40.0% | |
| AGCAGTTCTACTTTGCCATT+TGG | - | chr8_2:45978808-45978827 | Msa1250410:intron | 40.0% | |
| TACTCGGCACAAGAAAAACT+AGG | + | chr8_2:45979072-45979091 | None:intergenic | 40.0% | |
| GTGAATCAAGGTGTAAGAGG+AGG | - | chr8_2:45977000-45977019 | Msa1250410:CDS | 45.0% | |
| AATCAAGGTGTAAGAGGAGG+TGG | - | chr8_2:45977003-45977022 | Msa1250410:CDS | 45.0% | |
| CCGTCTTTACTAACACCGTT+TGG | + | chr8_2:45977208-45977227 | None:intergenic | 45.0% | |
| CACGTGCTTAATACAGAACC+GGG | - | chr8_2:45977283-45977302 | Msa1250410:intron | 45.0% | |
| TGTTCTGTGTGCTTTCGGAA+TGG | + | chr8_2:45977968-45977987 | None:intergenic | 45.0% | |
| TTCCCCATTGAAAGTAGTCC+TGG | - | chr8_2:45977993-45978012 | Msa1250410:CDS | 45.0% | |
| GACCAGGACTACTTTCAATG+GGG | + | chr8_2:45977998-45978017 | None:intergenic | 45.0% | |
| ! | CCATACCCGATCTCAGTTTT+AGG | + | chr8_2:45978128-45978147 | None:intergenic | 45.0% |
| CCTAAAACTGAGATCGGGTA+TGG | - | chr8_2:45978125-45978144 | Msa1250410:CDS | 45.0% | |
| GCTCTTTCATCTCTTCTTCC+TGG | - | chr8_2:45978299-45978318 | Msa1250410:CDS | 45.0% | |
| ACTTTGCATGCAGATGGACA+AGG | - | chr8_2:45978489-45978508 | Msa1250410:intron | 45.0% | |
| GGAACGAGTGAAGACTTTAG+AGG | - | chr8_2:45978555-45978574 | Msa1250410:intron | 45.0% | |
| ! | TAGAACTGCTCTGAACAGTG+AGG | + | chr8_2:45978798-45978817 | None:intergenic | 45.0% |
| ! | TCTCGTAAGGAGCATAAGTC+AGG | - | chr8_2:45979274-45979293 | Msa1250410:intron | 45.0% |
| ! | GGAGCATAAGTCAGGTTTTG+AGG | - | chr8_2:45979282-45979301 | Msa1250410:intron | 45.0% |
| GTGAATCAAGGTGTAAGAGG+AGG | - | chr8_2:45977000-45977019 | Msa1250410:CDS | 45.0% | |
| AATCAAGGTGTAAGAGGAGG+TGG | - | chr8_2:45977003-45977022 | Msa1250410:CDS | 45.0% | |
| CCGTCTTTACTAACACCGTT+TGG | + | chr8_2:45977208-45977227 | None:intergenic | 45.0% | |
| CACGTGCTTAATACAGAACC+GGG | - | chr8_2:45977283-45977302 | Msa1250410:intron | 45.0% | |
| TGTTCTGTGTGCTTTCGGAA+TGG | + | chr8_2:45977968-45977987 | None:intergenic | 45.0% | |
| TTCCCCATTGAAAGTAGTCC+TGG | - | chr8_2:45977993-45978012 | Msa1250410:CDS | 45.0% | |
| GACCAGGACTACTTTCAATG+GGG | + | chr8_2:45977998-45978017 | None:intergenic | 45.0% | |
| ! | CCATACCCGATCTCAGTTTT+AGG | + | chr8_2:45978128-45978147 | None:intergenic | 45.0% |
| CCTAAAACTGAGATCGGGTA+TGG | - | chr8_2:45978125-45978144 | Msa1250410:CDS | 45.0% | |
| GCTCTTTCATCTCTTCTTCC+TGG | - | chr8_2:45978299-45978318 | Msa1250410:CDS | 45.0% | |
| ACTTTGCATGCAGATGGACA+AGG | - | chr8_2:45978489-45978508 | Msa1250410:intron | 45.0% | |
| GGAACGAGTGAAGACTTTAG+AGG | - | chr8_2:45978555-45978574 | Msa1250410:intron | 45.0% | |
| ! | TAGAACTGCTCTGAACAGTG+AGG | + | chr8_2:45978798-45978817 | None:intergenic | 45.0% |
| ! | TCTCGTAAGGAGCATAAGTC+AGG | - | chr8_2:45979274-45979293 | Msa1250410:intron | 45.0% |
| ! | GGAGCATAAGTCAGGTTTTG+AGG | - | chr8_2:45979282-45979301 | Msa1250410:intron | 45.0% |
| GCTGAAGCAACAGATTGACC+AGG | + | chr8_2:45978014-45978033 | None:intergenic | 50.0% | |
| CAGCAGCAACCTTGTTCTCT+CGG | + | chr8_2:45978199-45978218 | None:intergenic | 50.0% | |
| ! | TGAGTATTGCGGTCGCAGTT+CGG | + | chr8_2:45978756-45978775 | None:intergenic | 50.0% |
| GCTGAAGCAACAGATTGACC+AGG | + | chr8_2:45978014-45978033 | None:intergenic | 50.0% | |
| CAGCAGCAACCTTGTTCTCT+CGG | + | chr8_2:45978199-45978218 | None:intergenic | 50.0% | |
| ! | TGAGTATTGCGGTCGCAGTT+CGG | + | chr8_2:45978756-45978775 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 45976955 | 45979316 | 45976955 | ID=Msa1250410;Name=Msa1250410 |
| chr8_2 | mRNA | 45976955 | 45979316 | 45976955 | ID=Msa1250410-mRNA-1;Parent=Msa1250410;Name=Msa1250410-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.16|0|0.85|0.16|0.14|7|0|286 |
| chr8_2 | exon | 45979311 | 45979316 | 45979311 | ID=Msa1250410-mRNA-1:exon:13838;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45978257 | 45978464 | 45978257 | ID=Msa1250410-mRNA-1:exon:13837;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45978104 | 45978238 | 45978104 | ID=Msa1250410-mRNA-1:exon:13836;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45977940 | 45978088 | 45977940 | ID=Msa1250410-mRNA-1:exon:13835;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45977662 | 45977769 | 45977662 | ID=Msa1250410-mRNA-1:exon:13834;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45977470 | 45977649 | 45977470 | ID=Msa1250410-mRNA-1:exon:13833;Parent=Msa1250410-mRNA-1 |
| chr8_2 | exon | 45976955 | 45977029 | 45976955 | ID=Msa1250410-mRNA-1:exon:13832;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45979311 | 45979316 | 45979311 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45978257 | 45978464 | 45978257 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45978104 | 45978238 | 45978104 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45977940 | 45978088 | 45977940 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45977662 | 45977769 | 45977662 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45977470 | 45977649 | 45977470 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| chr8_2 | CDS | 45976955 | 45977029 | 45976955 | ID=Msa1250410-mRNA-1:cds;Parent=Msa1250410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
