Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250570 | XP_013446281.1 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 2.66e-65 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250570 | A0A072TTZ7 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 1.27e-65 | 210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1137570 | Msa1250570 | 0.800923 | 1.147799e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250570 | MtrunA17_Chr8g0369411 | 99.010 | 101 | 1 | 0 | 1 | 101 | 1 | 101 | 2.44e-69 | 210 |
| Msa1250570 | MtrunA17_Chr5g0409571 | 68.103 | 116 | 36 | 1 | 1 | 116 | 1 | 115 | 1.27e-55 | 175 |
| Msa1250570 | MtrunA17_Chr2g0287431 | 30.822 | 146 | 84 | 5 | 1 | 141 | 1 | 134 | 2.65e-14 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250570 | AT1G32127.2 | 69.524 | 105 | 32 | 0 | 1 | 105 | 1 | 105 | 1.90e-51 | 164 |
| Msa1250570 | AT1G32127.1 | 69.524 | 105 | 32 | 0 | 1 | 105 | 1 | 105 | 1.90e-51 | 164 |
| Msa1250570 | AT1G55240.1 | 29.861 | 144 | 92 | 3 | 1 | 139 | 1 | 140 | 8.27e-17 | 75.5 |
| Msa1250570 | AT1G55230.1 | 30.556 | 144 | 91 | 4 | 1 | 139 | 1 | 140 | 1.52e-14 | 69.3 |
Find 30 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTCTTCTTGTTGGAGTA+TGG | 0.270558 | 8_2:+46315006 | Msa1250570:CDS |
| GGAACCTTATTTCTTCTTGT+TGG | 0.290898 | 8_2:+46314999 | Msa1250570:CDS |
| TACTCCAACAAGAAGAAATA+AGG | 0.343384 | 8_2:-46315003 | None:intergenic |
| GCTCGAACTTGGAATGTCTT+AGG | 0.362458 | 8_2:-46315065 | None:intergenic |
| TTGTTGGAGTATGGCATATA+TGG | 0.364293 | 8_2:+46315015 | Msa1250570:CDS |
| CTCTAGAGAAATCAAAATTC+AGG | 0.376535 | 8_2:-46316090 | None:intergenic |
| GGATCTTCTTCTGCTTCACT+CGG | 0.400201 | 8_2:+46316018 | Msa1250570:CDS |
| TGAAGGACGGCTCAAGTACT+TGG | 0.407163 | 8_2:+46315109 | Msa1250570:CDS |
| CTCAAAGTTATTCAAGTAAG+TGG | 0.407532 | 8_2:-46315228 | None:intergenic |
| ACAAGAAGAAATAAGGTTCC+AGG | 0.414770 | 8_2:-46314996 | None:intergenic |
| GAACTCTATGTTATTTCAGT+TGG | 0.425596 | 8_2:+46315131 | Msa1250570:CDS |
| CTATGATCTTCCTCTTCACT+AGG | 0.432274 | 8_2:+46315977 | Msa1250570:CDS |
| CAGGGTTCCAAGCTCGAACT+TGG | 0.443497 | 8_2:-46315076 | None:intergenic |
| CGTCCTTCAAATCCCGGTAC+AGG | 0.449912 | 8_2:-46315095 | None:intergenic |
| AACCCTGTACCGGGATTTGA+AGG | 0.463413 | 8_2:+46315092 | Msa1250570:CDS |
| AGACATTCCAAGTTCGAGCT+TGG | 0.474473 | 8_2:+46315069 | Msa1250570:CDS |
| AGGTCCTCCTCCTCTTCGCT+TGG | 0.489244 | 8_2:+46315997 | Msa1250570:CDS |
| AGAGGAAGATCATAGTGAAA+AGG | 0.490243 | 8_2:-46315969 | None:intergenic |
| AGATCCAAGCGAAGAGGAGG+AGG | 0.501345 | 8_2:-46316001 | None:intergenic |
| TCGAGCTTGGAACCCTGTAC+CGG | 0.503496 | 8_2:+46315082 | Msa1250570:CDS |
| TTGAATAACTTTGAGCACTC+AGG | 0.530890 | 8_2:+46315236 | Msa1250570:CDS |
| CGAGCTTGGAACCCTGTACC+GGG | 0.537732 | 8_2:+46315083 | Msa1250570:CDS |
| GATCTTCTTCTGCTTCACTC+GGG | 0.562458 | 8_2:+46316019 | Msa1250570:CDS |
| AGAAGATCCAAGCGAAGAGG+AGG | 0.566247 | 8_2:-46316004 | None:intergenic |
| TTGAGCCGTCCTTCAAATCC+CGG | 0.569317 | 8_2:-46315101 | None:intergenic |
| GTCCTTCAAATCCCGGTACA+GGG | 0.603842 | 8_2:-46315094 | None:intergenic |
| AGGAGGAGGACCTAGTGAAG+AGG | 0.619052 | 8_2:-46315987 | None:intergenic |
| CTGTACCGGGATTTGAAGGA+CGG | 0.627212 | 8_2:+46315096 | Msa1250570:CDS |
| AGAAGAAGATCCAAGCGAAG+AGG | 0.647902 | 8_2:-46316007 | None:intergenic |
| ATGGCATATATGGTGCTCTG+TGG | 0.727328 | 8_2:+46315025 | Msa1250570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTGAAAATTATCTTCTT+CGG | + | chr8_2:46315867-46315886 | Msa1250570:intron | 20.0% |
| !! | AGAAAAAGAAGATTTATACA+AGG | - | chr8_2:46315910-46315929 | None:intergenic | 20.0% |
| !! | TTGTTGAAAATTATCTTCTT+CGG | + | chr8_2:46315867-46315886 | Msa1250570:intron | 20.0% |
| !! | AGAAAAAGAAGATTTATACA+AGG | - | chr8_2:46315910-46315929 | None:intergenic | 20.0% |
| ! | TTAGGAACTTTCAAAAGAAT+CGG | - | chr8_2:46315611-46315630 | None:intergenic | 25.0% |
| !!! | ATTCTTTTGAAAGTTCCTAA+TGG | + | chr8_2:46315611-46315630 | Msa1250570:intron | 25.0% |
| !! | ACAATTTTCAAAGGTTGAAA+AGG | - | chr8_2:46316069-46316088 | None:intergenic | 25.0% |
| !! | AATTCAGGTACAATTTTCAA+AGG | - | chr8_2:46316078-46316097 | None:intergenic | 25.0% |
| ! | TTAGGAACTTTCAAAAGAAT+CGG | - | chr8_2:46315611-46315630 | None:intergenic | 25.0% |
| !!! | ATTCTTTTGAAAGTTCCTAA+TGG | + | chr8_2:46315611-46315630 | Msa1250570:intron | 25.0% |
| !! | ACAATTTTCAAAGGTTGAAA+AGG | - | chr8_2:46316069-46316088 | None:intergenic | 25.0% |
| !! | AATTCAGGTACAATTTTCAA+AGG | - | chr8_2:46316078-46316097 | None:intergenic | 25.0% |
| TACTCCAACAAGAAGAAATA+AGG | - | chr8_2:46315006-46315025 | None:intergenic | 30.0% | |
| TATTTCTTCTTGTTGGAGTA+TGG | + | chr8_2:46315006-46315025 | Msa1250570:CDS | 30.0% | |
| !! | GAACTCTATGTTATTTCAGT+TGG | + | chr8_2:46315131-46315150 | Msa1250570:CDS | 30.0% |
| !!! | ACACAACTGAAGTTTTTTGT+TGG | + | chr8_2:46315191-46315210 | Msa1250570:CDS | 30.0% |
| CTCAAAGTTATTCAAGTAAG+TGG | - | chr8_2:46315231-46315250 | None:intergenic | 30.0% | |
| !! | CTTCTGATGTTTTTGATCTT+CGG | + | chr8_2:46315263-46315282 | Msa1250570:intron | 30.0% |
| ! | TCCATTATTGGTATTTTCAC+CGG | - | chr8_2:46315677-46315696 | None:intergenic | 30.0% |
| CAACATTCAGTATCCATTAT+TGG | - | chr8_2:46315689-46315708 | None:intergenic | 30.0% | |
| TACTGAATGTTGAAATACCT+TGG | + | chr8_2:46315697-46315716 | Msa1250570:intron | 30.0% | |
| TACTCCAACAAGAAGAAATA+AGG | - | chr8_2:46315006-46315025 | None:intergenic | 30.0% | |
| TATTTCTTCTTGTTGGAGTA+TGG | + | chr8_2:46315006-46315025 | Msa1250570:CDS | 30.0% | |
| !! | GAACTCTATGTTATTTCAGT+TGG | + | chr8_2:46315131-46315150 | Msa1250570:CDS | 30.0% |
| !!! | ACACAACTGAAGTTTTTTGT+TGG | + | chr8_2:46315191-46315210 | Msa1250570:CDS | 30.0% |
| CTCAAAGTTATTCAAGTAAG+TGG | - | chr8_2:46315231-46315250 | None:intergenic | 30.0% | |
| !! | CTTCTGATGTTTTTGATCTT+CGG | + | chr8_2:46315263-46315282 | Msa1250570:intron | 30.0% |
| ! | TCCATTATTGGTATTTTCAC+CGG | - | chr8_2:46315677-46315696 | None:intergenic | 30.0% |
| CAACATTCAGTATCCATTAT+TGG | - | chr8_2:46315689-46315708 | None:intergenic | 30.0% | |
| TACTGAATGTTGAAATACCT+TGG | + | chr8_2:46315697-46315716 | Msa1250570:intron | 30.0% | |
| ! | TTCATAGGTCATATTTTGCC+TGG | + | chr8_2:46314978-46314997 | Msa1250570:CDS | 35.0% |
| ACAAGAAGAAATAAGGTTCC+AGG | - | chr8_2:46314999-46315018 | None:intergenic | 35.0% | |
| ! | GGAACCTTATTTCTTCTTGT+TGG | + | chr8_2:46314999-46315018 | Msa1250570:CDS | 35.0% |
| TTGTTGGAGTATGGCATATA+TGG | + | chr8_2:46315015-46315034 | Msa1250570:CDS | 35.0% | |
| !!! | CAACTGAAGTTTTTTGTTGG+TGG | + | chr8_2:46315194-46315213 | Msa1250570:CDS | 35.0% |
| TTGAATAACTTTGAGCACTC+AGG | + | chr8_2:46315236-46315255 | Msa1250570:CDS | 35.0% | |
| !! | GCAAAAGCACTAATTGATGT+TGG | - | chr8_2:46315398-46315417 | None:intergenic | 35.0% |
| ! | TTAGTGCTTTTGCTACAGAA+AGG | + | chr8_2:46315405-46315424 | Msa1250570:intron | 35.0% |
| AAAGATCTTCCCAAAAGTAG+CGG | + | chr8_2:46315428-46315447 | Msa1250570:intron | 35.0% | |
| AACAATCTCTAGCATTCCAT+CGG | + | chr8_2:46315523-46315542 | Msa1250570:intron | 35.0% | |
| AGCTTGAAGTTACAACAAAG+TGG | - | chr8_2:46315587-46315606 | None:intergenic | 35.0% | |
| TAAGTCGCATAAAACTTCAC+CGG | + | chr8_2:46315655-46315674 | Msa1250570:intron | 35.0% | |
| ACCGGTGAAAATACCAATAA+TGG | + | chr8_2:46315673-46315692 | Msa1250570:intron | 35.0% | |
| ! | GAAAATAGCGCAGAAACTTT+TGG | + | chr8_2:46315750-46315769 | Msa1250570:intron | 35.0% |
| !! | TAATGGAACTTGTTGCTCTT+AGG | + | chr8_2:46315774-46315793 | Msa1250570:intron | 35.0% |
| TTGCAACTGTTTCATGCAAT+AGG | + | chr8_2:46315825-46315844 | Msa1250570:intron | 35.0% | |
| TGCAACTGTTTCATGCAATA+GGG | + | chr8_2:46315826-46315845 | Msa1250570:intron | 35.0% | |
| ACAAGGAAAGAACAAAGAAG+AGG | - | chr8_2:46315893-46315912 | None:intergenic | 35.0% | |
| AGAGGAAGATCATAGTGAAA+AGG | - | chr8_2:46315972-46315991 | None:intergenic | 35.0% | |
| ! | TTCATAGGTCATATTTTGCC+TGG | + | chr8_2:46314978-46314997 | Msa1250570:CDS | 35.0% |
| ACAAGAAGAAATAAGGTTCC+AGG | - | chr8_2:46314999-46315018 | None:intergenic | 35.0% | |
| ! | GGAACCTTATTTCTTCTTGT+TGG | + | chr8_2:46314999-46315018 | Msa1250570:CDS | 35.0% |
| TTGTTGGAGTATGGCATATA+TGG | + | chr8_2:46315015-46315034 | Msa1250570:CDS | 35.0% | |
| !!! | CAACTGAAGTTTTTTGTTGG+TGG | + | chr8_2:46315194-46315213 | Msa1250570:CDS | 35.0% |
| TTGAATAACTTTGAGCACTC+AGG | + | chr8_2:46315236-46315255 | Msa1250570:CDS | 35.0% | |
| !! | GCAAAAGCACTAATTGATGT+TGG | - | chr8_2:46315398-46315417 | None:intergenic | 35.0% |
| ! | TTAGTGCTTTTGCTACAGAA+AGG | + | chr8_2:46315405-46315424 | Msa1250570:intron | 35.0% |
| AAAGATCTTCCCAAAAGTAG+CGG | + | chr8_2:46315428-46315447 | Msa1250570:intron | 35.0% | |
| AACAATCTCTAGCATTCCAT+CGG | + | chr8_2:46315523-46315542 | Msa1250570:intron | 35.0% | |
| AGCTTGAAGTTACAACAAAG+TGG | - | chr8_2:46315587-46315606 | None:intergenic | 35.0% | |
| TAAGTCGCATAAAACTTCAC+CGG | + | chr8_2:46315655-46315674 | Msa1250570:intron | 35.0% | |
| ACCGGTGAAAATACCAATAA+TGG | + | chr8_2:46315673-46315692 | Msa1250570:intron | 35.0% | |
| ! | GAAAATAGCGCAGAAACTTT+TGG | + | chr8_2:46315750-46315769 | Msa1250570:intron | 35.0% |
| !! | TAATGGAACTTGTTGCTCTT+AGG | + | chr8_2:46315774-46315793 | Msa1250570:intron | 35.0% |
| TTGCAACTGTTTCATGCAAT+AGG | + | chr8_2:46315825-46315844 | Msa1250570:intron | 35.0% | |
| TGCAACTGTTTCATGCAATA+GGG | + | chr8_2:46315826-46315845 | Msa1250570:intron | 35.0% | |
| ACAAGGAAAGAACAAAGAAG+AGG | - | chr8_2:46315893-46315912 | None:intergenic | 35.0% | |
| AGAGGAAGATCATAGTGAAA+AGG | - | chr8_2:46315972-46315991 | None:intergenic | 35.0% | |
| !!! | ACTGAATGTCCGCTACTTTT+GGG | - | chr8_2:46315440-46315459 | None:intergenic | 40.0% |
| TCATCACAATCATATCAGCG+AGG | + | chr8_2:46315474-46315493 | Msa1250570:intron | 40.0% | |
| AGAGATTGTTCAAGTGAAGG+TGG | - | chr8_2:46315513-46315532 | None:intergenic | 40.0% | |
| GCTAGAGATTGTTCAAGTGA+AGG | - | chr8_2:46315516-46315535 | None:intergenic | 40.0% | |
| ! | GCACTGATAGGACTTGTAAA+CGG | - | chr8_2:46315563-46315582 | None:intergenic | 40.0% |
| AGCATCAATCTGATGCCATT+AGG | - | chr8_2:46315629-46315648 | None:intergenic | 40.0% | |
| !! | GGTGAAGTTTTATGCGACTT+AGG | - | chr8_2:46315656-46315675 | None:intergenic | 40.0% |
| !! | GCGCAGAAACTTTTGGTTAA+TGG | + | chr8_2:46315757-46315776 | Msa1250570:intron | 40.0% |
| GTTTCATGCAATAGGGATTC+CGG | + | chr8_2:46315833-46315852 | Msa1250570:intron | 40.0% | |
| CTATGATCTTCCTCTTCACT+AGG | + | chr8_2:46315977-46315996 | Msa1250570:CDS | 40.0% | |
| !!! | ACTGAATGTCCGCTACTTTT+GGG | - | chr8_2:46315440-46315459 | None:intergenic | 40.0% |
| TCATCACAATCATATCAGCG+AGG | + | chr8_2:46315474-46315493 | Msa1250570:intron | 40.0% | |
| AGAGATTGTTCAAGTGAAGG+TGG | - | chr8_2:46315513-46315532 | None:intergenic | 40.0% | |
| GCTAGAGATTGTTCAAGTGA+AGG | - | chr8_2:46315516-46315535 | None:intergenic | 40.0% | |
| ! | GCACTGATAGGACTTGTAAA+CGG | - | chr8_2:46315563-46315582 | None:intergenic | 40.0% |
| AGCATCAATCTGATGCCATT+AGG | - | chr8_2:46315629-46315648 | None:intergenic | 40.0% | |
| !! | GGTGAAGTTTTATGCGACTT+AGG | - | chr8_2:46315656-46315675 | None:intergenic | 40.0% |
| !! | GCGCAGAAACTTTTGGTTAA+TGG | + | chr8_2:46315757-46315776 | Msa1250570:intron | 40.0% |
| GTTTCATGCAATAGGGATTC+CGG | + | chr8_2:46315833-46315852 | Msa1250570:intron | 40.0% | |
| CTATGATCTTCCTCTTCACT+AGG | + | chr8_2:46315977-46315996 | Msa1250570:CDS | 40.0% | |
| ATGGCATATATGGTGCTCTG+TGG | + | chr8_2:46315025-46315044 | Msa1250570:CDS | 45.0% | |
| GCTCGAACTTGGAATGTCTT+AGG | - | chr8_2:46315068-46315087 | None:intergenic | 45.0% | |
| AGACATTCCAAGTTCGAGCT+TGG | + | chr8_2:46315069-46315088 | Msa1250570:CDS | 45.0% | |
| !! | CACTGAATGTCCGCTACTTT+TGG | - | chr8_2:46315441-46315460 | None:intergenic | 45.0% |
| CACAATCATATCAGCGAGGA+AGG | + | chr8_2:46315478-46315497 | Msa1250570:intron | 45.0% | |
| !! | CAACAAAGTGGAGCACTGAT+AGG | - | chr8_2:46315575-46315594 | None:intergenic | 45.0% |
| CTCAAAAGCTGAAGGATCCA+AGG | - | chr8_2:46315717-46315736 | None:intergenic | 45.0% | |
| ! | CTTGGATCCTTCAGCTTTTG+AGG | + | chr8_2:46315715-46315734 | Msa1250570:intron | 45.0% |
| AAGTCTGCCTCAAAAGCTGA+AGG | - | chr8_2:46315725-46315744 | None:intergenic | 45.0% | |
| !! | GGAACTTGTTGCTCTTAGGT+TGG | + | chr8_2:46315778-46315797 | Msa1250570:intron | 45.0% |
| TTCAACAACCGACGACATAC+CGG | - | chr8_2:46315855-46315874 | None:intergenic | 45.0% | |
| AGAAGAAGATCCAAGCGAAG+AGG | - | chr8_2:46316010-46316029 | None:intergenic | 45.0% | |
| GGATCTTCTTCTGCTTCACT+CGG | + | chr8_2:46316018-46316037 | Msa1250570:CDS | 45.0% | |
| GATCTTCTTCTGCTTCACTC+GGG | + | chr8_2:46316019-46316038 | Msa1250570:CDS | 45.0% | |
| ATGGCATATATGGTGCTCTG+TGG | + | chr8_2:46315025-46315044 | Msa1250570:CDS | 45.0% | |
| GCTCGAACTTGGAATGTCTT+AGG | - | chr8_2:46315068-46315087 | None:intergenic | 45.0% | |
| AGACATTCCAAGTTCGAGCT+TGG | + | chr8_2:46315069-46315088 | Msa1250570:CDS | 45.0% | |
| !! | CACTGAATGTCCGCTACTTT+TGG | - | chr8_2:46315441-46315460 | None:intergenic | 45.0% |
| CACAATCATATCAGCGAGGA+AGG | + | chr8_2:46315478-46315497 | Msa1250570:intron | 45.0% | |
| !! | CAACAAAGTGGAGCACTGAT+AGG | - | chr8_2:46315575-46315594 | None:intergenic | 45.0% |
| CTCAAAAGCTGAAGGATCCA+AGG | - | chr8_2:46315717-46315736 | None:intergenic | 45.0% | |
| ! | CTTGGATCCTTCAGCTTTTG+AGG | + | chr8_2:46315715-46315734 | Msa1250570:intron | 45.0% |
| AAGTCTGCCTCAAAAGCTGA+AGG | - | chr8_2:46315725-46315744 | None:intergenic | 45.0% | |
| !! | GGAACTTGTTGCTCTTAGGT+TGG | + | chr8_2:46315778-46315797 | Msa1250570:intron | 45.0% |
| TTCAACAACCGACGACATAC+CGG | - | chr8_2:46315855-46315874 | None:intergenic | 45.0% | |
| AGAAGAAGATCCAAGCGAAG+AGG | - | chr8_2:46316010-46316029 | None:intergenic | 45.0% | |
| GGATCTTCTTCTGCTTCACT+CGG | + | chr8_2:46316018-46316037 | Msa1250570:CDS | 45.0% | |
| GATCTTCTTCTGCTTCACTC+GGG | + | chr8_2:46316019-46316038 | Msa1250570:CDS | 45.0% | |
| !! | AATTATTAATTTATTATGAT+AGG | + | chr8_2:46315938-46315957 | Msa1250570:intron | 5.0% |
| !! | AATTATTAATTTATTATGAT+AGG | + | chr8_2:46315938-46315957 | Msa1250570:intron | 5.0% |
| AACCCTGTACCGGGATTTGA+AGG | + | chr8_2:46315092-46315111 | Msa1250570:CDS | 50.0% | |
| GTCCTTCAAATCCCGGTACA+GGG | - | chr8_2:46315097-46315116 | None:intergenic | 50.0% | |
| CTGTACCGGGATTTGAAGGA+CGG | + | chr8_2:46315096-46315115 | Msa1250570:CDS | 50.0% | |
| TTGAGCCGTCCTTCAAATCC+CGG | - | chr8_2:46315104-46315123 | None:intergenic | 50.0% | |
| TGAAGGACGGCTCAAGTACT+TGG | + | chr8_2:46315109-46315128 | Msa1250570:CDS | 50.0% | |
| GGATCAATGACAGAAGCCGA+TGG | - | chr8_2:46315542-46315561 | None:intergenic | 50.0% | |
| TAGGGATTCCGGTATGTCGT+CGG | + | chr8_2:46315844-46315863 | Msa1250570:intron | 50.0% | |
| AGAAGATCCAAGCGAAGAGG+AGG | - | chr8_2:46316007-46316026 | None:intergenic | 50.0% | |
| AACCCTGTACCGGGATTTGA+AGG | + | chr8_2:46315092-46315111 | Msa1250570:CDS | 50.0% | |
| GTCCTTCAAATCCCGGTACA+GGG | - | chr8_2:46315097-46315116 | None:intergenic | 50.0% | |
| CTGTACCGGGATTTGAAGGA+CGG | + | chr8_2:46315096-46315115 | Msa1250570:CDS | 50.0% | |
| TTGAGCCGTCCTTCAAATCC+CGG | - | chr8_2:46315104-46315123 | None:intergenic | 50.0% | |
| TGAAGGACGGCTCAAGTACT+TGG | + | chr8_2:46315109-46315128 | Msa1250570:CDS | 50.0% | |
| GGATCAATGACAGAAGCCGA+TGG | - | chr8_2:46315542-46315561 | None:intergenic | 50.0% | |
| TAGGGATTCCGGTATGTCGT+CGG | + | chr8_2:46315844-46315863 | Msa1250570:intron | 50.0% | |
| AGAAGATCCAAGCGAAGAGG+AGG | - | chr8_2:46316007-46316026 | None:intergenic | 50.0% | |
| CAGGGTTCCAAGCTCGAACT+TGG | - | chr8_2:46315079-46315098 | None:intergenic | 55.0% | |
| TCGAGCTTGGAACCCTGTAC+CGG | + | chr8_2:46315082-46315101 | Msa1250570:CDS | 55.0% | |
| CGTCCTTCAAATCCCGGTAC+AGG | - | chr8_2:46315098-46315117 | None:intergenic | 55.0% | |
| AGGAGGAGGACCTAGTGAAG+AGG | - | chr8_2:46315990-46316009 | None:intergenic | 55.0% | |
| AGATCCAAGCGAAGAGGAGG+AGG | - | chr8_2:46316004-46316023 | None:intergenic | 55.0% | |
| CAGGGTTCCAAGCTCGAACT+TGG | - | chr8_2:46315079-46315098 | None:intergenic | 55.0% | |
| TCGAGCTTGGAACCCTGTAC+CGG | + | chr8_2:46315082-46315101 | Msa1250570:CDS | 55.0% | |
| CGTCCTTCAAATCCCGGTAC+AGG | - | chr8_2:46315098-46315117 | None:intergenic | 55.0% | |
| AGGAGGAGGACCTAGTGAAG+AGG | - | chr8_2:46315990-46316009 | None:intergenic | 55.0% | |
| AGATCCAAGCGAAGAGGAGG+AGG | - | chr8_2:46316004-46316023 | None:intergenic | 55.0% | |
| CGAGCTTGGAACCCTGTACC+GGG | + | chr8_2:46315083-46315102 | Msa1250570:CDS | 60.0% | |
| AGGTCCTCCTCCTCTTCGCT+TGG | + | chr8_2:46315997-46316016 | Msa1250570:CDS | 60.0% | |
| CGAGCTTGGAACCCTGTACC+GGG | + | chr8_2:46315083-46315102 | Msa1250570:CDS | 60.0% | |
| AGGTCCTCCTCCTCTTCGCT+TGG | + | chr8_2:46315997-46316016 | Msa1250570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 46314969 | 46316101 | 46314969 | ID=Msa1250570;Name=Msa1250570 |
| chr8_2 | mRNA | 46314969 | 46316101 | 46314969 | ID=Msa1250570-mRNA-1;Parent=Msa1250570;Name=Msa1250570-mRNA-1;_AED=0.58;_eAED=0.58;_QI=0|0|0|0.5|1|1|2|0|147 |
| chr8_2 | exon | 46314969 | 46315270 | 46314969 | ID=Msa1250570-mRNA-1:exon:13947;Parent=Msa1250570-mRNA-1 |
| chr8_2 | exon | 46315960 | 46316101 | 46315960 | ID=Msa1250570-mRNA-1:exon:13948;Parent=Msa1250570-mRNA-1 |
| chr8_2 | CDS | 46314969 | 46315270 | 46314969 | ID=Msa1250570-mRNA-1:cds;Parent=Msa1250570-mRNA-1 |
| chr8_2 | CDS | 46315960 | 46316101 | 46315960 | ID=Msa1250570-mRNA-1:cds;Parent=Msa1250570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
