Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251990 | XP_003628919.2 | 86.282 | 277 | 4 | 1 | 1 | 243 | 1 | 277 | 7.73e-169 | 476 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251990 | sp|Q8S8F8|GEM_ARATH | 52.862 | 297 | 80 | 6 | 1 | 238 | 1 | 296 | 1.84e-88 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251990 | G7LJ99 | 86.282 | 277 | 4 | 1 | 1 | 243 | 1 | 277 | 3.69e-169 | 476 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0092410 | Msa1251990 | 0.801191 | 1.011611e-48 | -8.615850e-47 |
| Msa0613110 | Msa1251990 | 0.802025 | 6.823855e-49 | -8.615850e-47 |
| Msa0673120 | Msa1251990 | 0.823084 | 1.675437e-53 | -8.615850e-47 |
| Msa0809940 | Msa1251990 | 0.801479 | 8.831598e-49 | -8.615850e-47 |
| Msa1236440 | Msa1251990 | 0.812998 | 3.196523e-51 | -8.615850e-47 |
| Msa1251990 | Msa1277670 | 0.819827 | 9.465617e-53 | -8.615850e-47 |
| Msa1251990 | Msa1313700 | 0.809003 | 2.344904e-50 | -8.615850e-47 |
| Msa0371950 | Msa1251990 | 0.808420 | 3.124232e-50 | -8.615850e-47 |
| Msa1043120 | Msa1251990 | 0.803337 | 3.657917e-49 | -8.615850e-47 |
| Msa0269560 | Msa1251990 | 0.805812 | 1.114218e-49 | -8.615850e-47 |
| Msa0501410 | Msa1251990 | 0.802705 | 4.942530e-49 | -8.615850e-47 |
| Msa0863720 | Msa1251990 | 0.822815 | 1.935801e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251990 | MtrunA17_Chr8g0367701 | 86.282 | 277 | 4 | 1 | 1 | 243 | 1 | 277 | 7.11e-173 | 476 |
| Msa1251990 | MtrunA17_Chr3g0133221 | 72.789 | 147 | 40 | 0 | 89 | 235 | 111 | 257 | 2.58e-79 | 239 |
| Msa1251990 | MtrunA17_Chr7g0251801 | 46.575 | 146 | 77 | 1 | 89 | 233 | 129 | 274 | 1.18e-46 | 156 |
| Msa1251990 | MtrunA17_Chr2g0315771 | 46.622 | 148 | 77 | 2 | 89 | 234 | 79 | 226 | 4.98e-41 | 140 |
| Msa1251990 | MtrunA17_Chr1g0162171 | 39.041 | 146 | 88 | 1 | 89 | 233 | 75 | 220 | 1.00e-37 | 131 |
| Msa1251990 | MtrunA17_Chr6g0481891 | 41.781 | 146 | 84 | 1 | 89 | 233 | 51 | 196 | 2.87e-37 | 129 |
| Msa1251990 | MtrunA17_Chr1g0212091 | 40.816 | 147 | 84 | 2 | 89 | 233 | 73 | 218 | 4.18e-37 | 130 |
| Msa1251990 | MtrunA17_Chr8g0388871 | 36.667 | 180 | 107 | 3 | 56 | 233 | 8 | 182 | 1.90e-36 | 127 |
| Msa1251990 | MtrunA17_Chr1g0212121 | 35.556 | 180 | 104 | 3 | 63 | 233 | 39 | 215 | 9.10e-36 | 126 |
| Msa1251990 | MtrunA17_Chr1g0212181 | 32.973 | 185 | 112 | 3 | 63 | 238 | 39 | 220 | 4.16e-32 | 117 |
| Msa1251990 | MtrunA17_Chr1g0212171 | 33.333 | 174 | 108 | 3 | 61 | 233 | 52 | 218 | 9.83e-31 | 113 |
| Msa1251990 | MtrunA17_Chr1g0212111 | 45.283 | 106 | 57 | 1 | 129 | 233 | 49 | 154 | 1.85e-25 | 98.6 |
| Msa1251990 | MtrunA17_Chr1g0212131 | 44.643 | 56 | 31 | 0 | 178 | 233 | 6 | 61 | 2.41e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1251990 | AT2G22475.1 | 52.862 | 297 | 80 | 6 | 1 | 238 | 1 | 296 | 1.87e-89 | 266 |
| Msa1251990 | AT1G28200.1 | 64.626 | 147 | 52 | 0 | 89 | 235 | 110 | 256 | 1.37e-70 | 217 |
| Msa1251990 | AT1G28200.2 | 64.626 | 147 | 52 | 0 | 89 | 235 | 110 | 256 | 1.37e-70 | 217 |
| Msa1251990 | AT4G40100.1 | 48.879 | 223 | 56 | 3 | 44 | 236 | 25 | 219 | 1.01e-59 | 188 |
| Msa1251990 | AT2G22475.2 | 45.868 | 242 | 71 | 6 | 1 | 183 | 1 | 241 | 9.34e-51 | 166 |
| Msa1251990 | AT5G13200.1 | 47.183 | 142 | 74 | 1 | 89 | 229 | 115 | 256 | 3.34e-44 | 150 |
| Msa1251990 | AT4G01600.2 | 42.953 | 149 | 83 | 1 | 87 | 233 | 71 | 219 | 1.24e-39 | 137 |
| Msa1251990 | AT4G01600.3 | 42.177 | 147 | 83 | 1 | 89 | 233 | 39 | 185 | 2.25e-39 | 135 |
| Msa1251990 | AT4G01600.1 | 42.177 | 147 | 83 | 1 | 89 | 233 | 78 | 224 | 5.60e-39 | 135 |
| Msa1251990 | AT5G23370.1 | 35.294 | 204 | 123 | 3 | 31 | 233 | 18 | 213 | 2.99e-38 | 133 |
| Msa1251990 | AT5G23350.1 | 40.000 | 145 | 86 | 1 | 90 | 233 | 69 | 213 | 7.09e-38 | 132 |
| Msa1251990 | AT5G23360.1 | 39.310 | 145 | 87 | 1 | 90 | 233 | 61 | 205 | 2.19e-36 | 128 |
| Msa1251990 | AT5G08350.1 | 34.975 | 203 | 120 | 3 | 33 | 233 | 20 | 212 | 3.25e-36 | 128 |
| Msa1251990 | AT5G13200.2 | 45.161 | 93 | 50 | 1 | 89 | 180 | 115 | 207 | 1.72e-23 | 94.7 |
Find 85 sgRNAs with CRISPR-Local
Find 425 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTCGACAATCATGAATTT+TGG | 0.136158 | 8_2:-48652536 | Msa1251990:CDS |
| TTCATACCTTGGACCATTTA+TGG | 0.163071 | 8_2:-48652303 | Msa1251990:three_prime_UTR |
| GGAGTTTCGGTGTTCGTTTC+CGG | 0.220422 | 8_2:+48658477 | None:intergenic |
| GTTGATTCCGTAACCAATTC+AGG | 0.305826 | 8_2:+48658342 | None:intergenic |
| CTGCTTGAAGTGCATCTTGC+AGG | 0.309085 | 8_2:+48652475 | None:intergenic |
| CCTCCTCAATTCAACGTTAT+GGG | 0.323370 | 8_2:-48658249 | Msa1251990:intron |
| TCCTCCTCAATTCAACGTTA+TGG | 0.324305 | 8_2:-48658250 | Msa1251990:CDS |
| ATATACAAAACTCCCATTAC+TGG | 0.331546 | 8_2:+48657085 | None:intergenic |
| GTTGCGGCGGCGTCTCCGTT+TGG | 0.340193 | 8_2:+48658450 | None:intergenic |
| TTCCAATCGATCTCCATAAA+TGG | 0.351958 | 8_2:+48652290 | None:intergenic |
| TTGCGGCGGCGTCTCCGTTT+GGG | 0.355674 | 8_2:+48658451 | None:intergenic |
| AACAGAATGGAGTTATTATA+AGG | 0.364266 | 8_2:-48657002 | Msa1251990:intron |
| ATGTCACGCCTTTACACTAT+AGG | 0.375363 | 8_2:-48652390 | Msa1251990:three_prime_UTR |
| TCGGTGTTCGTTTCCGGCTT+CGG | 0.389329 | 8_2:+48658483 | None:intergenic |
| CGGAGACGCCGCCGCAACAA+AGG | 0.390888 | 8_2:-48658445 | Msa1251990:CDS |
| AAGGCGTGACATATATTTGC+TGG | 0.399415 | 8_2:+48652401 | None:intergenic |
| GGTACATTGGAGTCCTGAAT+TGG | 0.408737 | 8_2:-48658355 | Msa1251990:CDS |
| CGGCTTCGGTTGTTCCATGA+TGG | 0.414051 | 8_2:+48658497 | None:intergenic |
| AAGGGAGTCGGATCCGGATC+TGG | 0.424154 | 8_2:-48658426 | Msa1251990:CDS |
| TCCGTTTGGGATGGGAGTTT+CGG | 0.424976 | 8_2:+48658464 | None:intergenic |
| TAGCATGGCTGAAGCTGCTA+TGG | 0.428381 | 8_2:-48657239 | Msa1251990:CDS |
| GCAACAAAGGGAGTCGGATC+CGG | 0.435604 | 8_2:-48658432 | Msa1251990:CDS |
| TACCGATTTCTTCATGCTAC+CGG | 0.440909 | 8_2:+48658374 | None:intergenic |
| ACGTCAGCTGGTCCAGTAAT+GGG | 0.445382 | 8_2:-48657097 | Msa1251990:CDS |
| GACCATTTATGGAGATCGAT+TGG | 0.449850 | 8_2:-48652292 | Msa1251990:three_prime_UTR |
| TTCTTCATGCTACCGGGCGA+TGG | 0.459084 | 8_2:+48658381 | None:intergenic |
| CACGTCAGCTGGTCCAGTAA+TGG | 0.459451 | 8_2:-48657098 | Msa1251990:CDS |
| TTGGAGTCCTGAATTGGTTA+CGG | 0.476212 | 8_2:-48658349 | Msa1251990:CDS |
| ATAGCAGCTTCAGCCATGCT+AGG | 0.476828 | 8_2:+48657241 | None:intergenic |
| GGCGGCGTCTCCGTTTGGGA+TGG | 0.478284 | 8_2:+48658455 | None:intergenic |
| TTACTGTAGGATTCATACCT+TGG | 0.480427 | 8_2:-48652314 | Msa1251990:three_prime_UTR |
| GCCCGGTAGCATGAAGAAAT+CGG | 0.481425 | 8_2:-48658376 | Msa1251990:CDS |
| GCGGCGTCTCCGTTTGGGAT+GGG | 0.490004 | 8_2:+48658456 | None:intergenic |
| AACTTGTTAGCAATTATAGT+TGG | 0.493493 | 8_2:-48652221 | Msa1251990:three_prime_UTR |
| GGAGACGCCGCCGCAACAAA+GGG | 0.496271 | 8_2:-48658444 | Msa1251990:CDS |
| GGATTGGCTGTATTAGATGA+AGG | 0.504721 | 8_2:+48652585 | None:intergenic |
| TGCTATGGGAAGAATTGCGC+AGG | 0.506994 | 8_2:-48657224 | Msa1251990:CDS |
| TGTTATCTATCCACGTCAGC+TGG | 0.514433 | 8_2:-48657109 | Msa1251990:CDS |
| TGTTGATATGAATTTACTGT+AGG | 0.515737 | 8_2:-48652327 | Msa1251990:three_prime_UTR |
| ACGCCTTTACACTATAGGCT+TGG | 0.517397 | 8_2:-48652385 | Msa1251990:three_prime_UTR |
| CATCATGGAACAACCGAAGC+CGG | 0.517788 | 8_2:-48658496 | Msa1251990:exon |
| TGGGAAGAGAAAGGAAAGAG+AGG | 0.521827 | 8_2:+48658619 | None:intergenic |
| TAGCGGTTCCGATCCAGATC+CGG | 0.528264 | 8_2:+48658413 | None:intergenic |
| ACCGATTTCTTCATGCTACC+GGG | 0.530140 | 8_2:+48658375 | None:intergenic |
| ACCGAAACTCCCATCCCAAA+CGG | 0.531029 | 8_2:-48658465 | Msa1251990:CDS |
| CTGCAAGATGCACTTCAAGC+AGG | 0.532744 | 8_2:-48652474 | Msa1251990:CDS |
| AGAGAAAGGAAAGAGAGGAT+TGG | 0.533454 | 8_2:+48658624 | None:intergenic |
| GGAGGAGGTTGAGAGAAAGA+AGG | 0.541026 | 8_2:+48658267 | None:intergenic |
| AGAGGATTGGTTGAATGTGT+TGG | 0.543183 | 8_2:+48658637 | None:intergenic |
| GCGCGTGAAAGCGCGTGTCG+TGG | 0.545155 | 8_2:+48658522 | None:intergenic |
| TTGACACTGTTCCAGAAGAA+CGG | 0.550516 | 8_2:-48657150 | Msa1251990:CDS |
| TCCGACTCCCTTTGTTGCGG+CGG | 0.555479 | 8_2:+48658437 | None:intergenic |
| TAGCAGCTTCAGCCATGCTA+GGG | 0.556987 | 8_2:+48657242 | None:intergenic |
| TCTCATATCCACCTTCTGCT+AGG | 0.557742 | 8_2:+48657191 | None:intergenic |
| GATTGTCGACAGAGATCACT+TGG | 0.563642 | 8_2:+48652547 | None:intergenic |
| ATTCCAAGCCTATAGTGTAA+AGG | 0.567462 | 8_2:+48652382 | None:intergenic |
| TTGAACTATGATAACGCTGT+GGG | 0.567844 | 8_2:-48652501 | Msa1251990:CDS |
| AGTCGGATCCGGATCTGGAT+CGG | 0.573058 | 8_2:-48658421 | Msa1251990:CDS |
| GCATGAAGAAATCGGTACAT+TGG | 0.574703 | 8_2:-48658368 | Msa1251990:CDS |
| CTAGGCACGGAACCATCGCC+CGG | 0.579996 | 8_2:-48658393 | Msa1251990:CDS |
| AAAATGAGGACAAAACAGAA+TGG | 0.583227 | 8_2:-48657015 | Msa1251990:CDS |
| CATTACTGGACCAGCTGACG+TGG | 0.584046 | 8_2:+48657099 | None:intergenic |
| TAACCCATAACGTTGAATTG+AGG | 0.588843 | 8_2:+48658246 | None:intergenic |
| CGATCTCCATAAATGGTCCA+AGG | 0.588977 | 8_2:+48652297 | None:intergenic |
| AGTGAAAACAAGCCCTAGCA+TGG | 0.591974 | 8_2:-48657254 | Msa1251990:CDS |
| GTATTCGAACGGTGTTCATG+AGG | 0.592466 | 8_2:+48658306 | None:intergenic |
| AGAATATGCAATCTTTGCTG+TGG | 0.597335 | 8_2:+48657060 | None:intergenic |
| GAACAGTGTCAAATGTACTC+AGG | 0.598058 | 8_2:+48657161 | None:intergenic |
| AGCATGGCTGAAGCTGCTAT+GGG | 0.599364 | 8_2:-48657238 | Msa1251990:CDS |
| GATTGGAATAGTTAGAAAAG+TGG | 0.601165 | 8_2:-48652275 | Msa1251990:three_prime_UTR |
| GGAACAAAGGTCCTAGCAGA+AGG | 0.612302 | 8_2:-48657202 | Msa1251990:CDS |
| CCCATAACGTTGAATTGAGG+AGG | 0.613034 | 8_2:+48658249 | None:intergenic |
| ATAACGTTGAATTGAGGAGG+AGG | 0.614589 | 8_2:+48658252 | None:intergenic |
| AAGAATTGCGCAGGGAACAA+AGG | 0.615276 | 8_2:-48657215 | Msa1251990:CDS |
| GGATCTGGATCGGAACCGCT+AGG | 0.615731 | 8_2:-48658411 | Msa1251990:CDS |
| ACAAAGGTCCTAGCAGAAGG+TGG | 0.616075 | 8_2:-48657199 | Msa1251990:CDS |
| CTTCGGTTGTTCCATGATGG+CGG | 0.624315 | 8_2:+48658500 | None:intergenic |
| GCCGCCGCAACAAAGGGAGT+CGG | 0.629309 | 8_2:-48658438 | Msa1251990:CDS |
| ATAGTTAGAAAAGTGGTCTG+TGG | 0.631828 | 8_2:-48652268 | Msa1251990:three_prime_UTR |
| AATTGAAATACGTATTCGAA+CGG | 0.632788 | 8_2:+48658295 | None:intergenic |
| TGGATCGGAACCGCTAGGCA+CGG | 0.637711 | 8_2:-48658406 | Msa1251990:CDS |
| GGATCCGACTCCCTTTGTTG+CGG | 0.640145 | 8_2:+48658434 | None:intergenic |
| CTTGAACTATGATAACGCTG+TGG | 0.650671 | 8_2:-48652502 | Msa1251990:CDS |
| GGCGATGGTTCCGTGCCTAG+CGG | 0.653663 | 8_2:+48658396 | None:intergenic |
| GCTATGGGAAGAATTGCGCA+GGG | 0.710515 | 8_2:-48657223 | Msa1251990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTCTATTTTAAGTTTTT+GGG | - | chr8_2:48653271-48653290 | Msa1251990:intron | 10.0% |
| !! | AATATCAATTATTATGTATT+TGG | + | chr8_2:48654314-48654333 | None:intergenic | 10.0% |
| !!! | AAGTTCTTTTTTTTTTTATT+AGG | + | chr8_2:48657424-48657443 | None:intergenic | 10.0% |
| !! | ATATTAAGCGAATAAATATA+AGG | + | chr8_2:48652760-48652779 | None:intergenic | 15.0% |
| !!! | GATTTTCTATTTTAAGTTTT+TGG | - | chr8_2:48653270-48653289 | Msa1251990:intron | 15.0% |
| !! | ATATGCTTTATATTATATGT+TGG | - | chr8_2:48654668-48654687 | Msa1251990:intron | 15.0% |
| !! | TTAATACTAGAATTAATTAG+TGG | - | chr8_2:48655682-48655701 | Msa1251990:intron | 15.0% |
| !! | TATTGCATTGAAAATTAAAA+GGG | + | chr8_2:48656882-48656901 | None:intergenic | 15.0% |
| !! | ATATTGCATTGAAAATTAAA+AGG | + | chr8_2:48656883-48656902 | None:intergenic | 15.0% |
| !! | TAATAATTTAAACTGTTGTA+AGG | + | chr8_2:48657289-48657308 | None:intergenic | 15.0% |
| !! | AAACTAAATAAGATCTATAA+TGG | - | chr8_2:48657944-48657963 | Msa1251990:intron | 15.0% |
| !! | TTAAATGATTTATTATAGTC+TGG | + | chr8_2:48658080-48658099 | None:intergenic | 15.0% |
| !!! | TGATATATTTTCATTTGATA+TGG | - | chr8_2:48658211-48658230 | Msa1251990:intron | 15.0% |
| !!! | TATTTTTTTGCGTTAGAATT+CGG | + | chr8_2:48652299-48652318 | None:intergenic | 20.0% |
| !!! | GTTTGAAATATTAATAGTCT+CGG | - | chr8_2:48652852-48652871 | Msa1251990:intron | 20.0% |
| !!! | TTTGAAATATTAATAGTCTC+GGG | - | chr8_2:48652853-48652872 | Msa1251990:intron | 20.0% |
| !!! | GTTTTATGTTAAATTAAGTC+AGG | - | chr8_2:48654019-48654038 | Msa1251990:intron | 20.0% |
| !! | AAAAGACTTAATTGTTCTAA+AGG | - | chr8_2:48654150-48654169 | Msa1251990:intron | 20.0% |
| !! | TTTGCATTATAATGAATGAA+AGG | + | chr8_2:48654568-48654587 | None:intergenic | 20.0% |
| !! | AATACTTAGTTTAGTATAAC+CGG | - | chr8_2:48654802-48654821 | Msa1251990:intron | 20.0% |
| !!! | GTGTTTTAATATTTGGATTT+TGG | + | chr8_2:48654839-48654858 | None:intergenic | 20.0% |
| !!! | TAACTAAAGGCATATATTAT+AGG | - | chr8_2:48655319-48655338 | Msa1251990:intron | 20.0% |
| !! | CTCATATATAATATTGTGAA+TGG | - | chr8_2:48655363-48655382 | Msa1251990:intron | 20.0% |
| !! | TTAGTGGTAATTAGTTAATA+AGG | - | chr8_2:48655698-48655717 | Msa1251990:intron | 20.0% |
| !! | ATTAGTTAATAAGGCTTAAT+CGG | - | chr8_2:48655707-48655726 | Msa1251990:intron | 20.0% |
| !!! | ATCGGTTAAATGAATATTTT+TGG | - | chr8_2:48655725-48655744 | Msa1251990:intron | 20.0% |
| !! | TAATCCAAGAAATATAGTAA+AGG | + | chr8_2:48656017-48656036 | None:intergenic | 20.0% |
| !! | ACTCATAGAAATGTAAAAAA+GGG | + | chr8_2:48656565-48656584 | None:intergenic | 20.0% |
| !! | AACTCATAGAAATGTAAAAA+AGG | + | chr8_2:48656566-48656585 | None:intergenic | 20.0% |
| !!! | TTTTTACATTTCTATGAGTT+TGG | - | chr8_2:48656566-48656585 | Msa1251990:intron | 20.0% |
| !!! | TTTTACATTTCTATGAGTTT+GGG | - | chr8_2:48656567-48656586 | Msa1251990:intron | 20.0% |
| !!! | ATAGTGTAATATATTGACTT+GGG | + | chr8_2:48656962-48656981 | None:intergenic | 20.0% |
| !! | TATATTACACTATGCATTTA+TGG | - | chr8_2:48656969-48656988 | Msa1251990:intron | 20.0% |
| !!! | TAGAACCAATTAAGTTTTAA+TGG | + | chr8_2:48657136-48657155 | None:intergenic | 20.0% |
| !! | CTGTGAAATAAATTAACAAA+GGG | + | chr8_2:48657347-48657366 | None:intergenic | 20.0% |
| !!! | TTTTTTTTATTAGGACACAA+AGG | + | chr8_2:48657415-48657434 | None:intergenic | 20.0% |
| !!! | AATCATGAATTTTGGTTTAT+GGG | - | chr8_2:48658348-48658367 | Msa1251990:CDS | 20.0% |
| !! | GTTTTTCTGTTAGATTTTGA+AGG | + | chr8_2:48652330-48652349 | None:intergenic | 25.0% |
| ! | AATTGAAATACGTATTCGAA+CGG | + | chr8_2:48652584-48652603 | None:intergenic | 25.0% |
| !! | TTTTCGATGATTCTTTTGTT+CGG | - | chr8_2:48652655-48652674 | Msa1251990:intron | 25.0% |
| ! | TTAACCATTTACCAACAATT+TGG | - | chr8_2:48652796-48652815 | Msa1251990:intron | 25.0% |
| !! | AATGTTTTCAGTTATCAAGT+AGG | - | chr8_2:48653123-48653142 | Msa1251990:intron | 25.0% |
| !!! | TCTATTTTAAGTTTTTGGGT+TGG | - | chr8_2:48653275-48653294 | Msa1251990:intron | 25.0% |
| ! | TTATCATAGAAGATTCAATG+CGG | + | chr8_2:48653560-48653579 | None:intergenic | 25.0% |
| ! | AACAGAATGGAGTTATTATA+AGG | - | chr8_2:48653874-48653893 | Msa1251990:intron | 25.0% |
| !! | TGTTTTCCACAACAAAATTT+TGG | - | chr8_2:48653956-48653975 | Msa1251990:intron | 25.0% |
| !!! | GGGTTATTATTTTATAGAGA+GGG | + | chr8_2:48654484-48654503 | None:intergenic | 25.0% |
| !!! | AGGGTTATTATTTTATAGAG+AGG | + | chr8_2:48654485-48654504 | None:intergenic | 25.0% |
| !!! | CAAATTTTAAAGACTGAAAC+AGG | + | chr8_2:48654701-48654720 | None:intergenic | 25.0% |
| !!! | CAGTCTTTAAAATTTGAACA+TGG | - | chr8_2:48654705-48654724 | Msa1251990:intron | 25.0% |
| ! | ATACTTAGTTTAGTATAACC+GGG | - | chr8_2:48654803-48654822 | Msa1251990:intron | 25.0% |
| !!! | AGATAGCGTGTTTTAATATT+TGG | + | chr8_2:48654846-48654865 | None:intergenic | 25.0% |
| ! | AGACATGAAATATTTGATCT+AGG | - | chr8_2:48655045-48655064 | Msa1251990:intron | 25.0% |
| ! | GACATGAAATATTTGATCTA+GGG | - | chr8_2:48655046-48655065 | Msa1251990:intron | 25.0% |
| !! | TGAGTAACACATAATTTGTA+CGG | + | chr8_2:48655207-48655226 | None:intergenic | 25.0% |
| ! | ACACTATAACAACTAACTAA+AGG | - | chr8_2:48655306-48655325 | Msa1251990:intron | 25.0% |
| !! | TCTACTACTCATATTTTATC+AGG | - | chr8_2:48655454-48655473 | Msa1251990:intron | 25.0% |
| ! | GTTTAACAGGAATAAATGAT+TGG | + | chr8_2:48655495-48655514 | None:intergenic | 25.0% |
| !! | ATAACATGTTCTTTTAATCC+AGG | + | chr8_2:48655565-48655584 | None:intergenic | 25.0% |
| ! | TGATAAGTATATGTTAGTTG+AGG | - | chr8_2:48655656-48655675 | Msa1251990:intron | 25.0% |
| ! | GATAAGTATATGTTAGTTGA+GGG | - | chr8_2:48655657-48655676 | Msa1251990:intron | 25.0% |
| !!! | GAATATTTTTGGTCTTTTGT+AGG | - | chr8_2:48655736-48655755 | Msa1251990:intron | 25.0% |
| ! | CTATCCTTTACTATATTTCT+TGG | - | chr8_2:48656010-48656029 | Msa1251990:intron | 25.0% |
| ! | TAGCAACTACATACAATATA+TGG | - | chr8_2:48656276-48656295 | Msa1251990:intron | 25.0% |
| ! | TAAAAGGGTCATTCTTTATT+GGG | + | chr8_2:48656867-48656886 | None:intergenic | 25.0% |
| ! | TTAAAAGGGTCATTCTTTAT+TGG | + | chr8_2:48656868-48656887 | None:intergenic | 25.0% |
| !! | CATAGTGTAATATATTGACT+TGG | + | chr8_2:48656963-48656982 | None:intergenic | 25.0% |
| !! | AAAGAAAAGCGTATAAATGA+AGG | + | chr8_2:48657049-48657068 | None:intergenic | 25.0% |
| ! | TCTCACCATTAAAACTTAAT+TGG | - | chr8_2:48657128-48657147 | Msa1251990:CDS | 25.0% |
| ! | TGTTTAAATCCAAATAAGAG+GGG | + | chr8_2:48657220-48657239 | None:intergenic | 25.0% |
| ! | GTGTTTAAATCCAAATAAGA+GGG | + | chr8_2:48657221-48657240 | None:intergenic | 25.0% |
| ! | AATTTAAACTGTTGTAAGGA+AGG | + | chr8_2:48657285-48657304 | None:intergenic | 25.0% |
| ! | CCTGTGAAATAAATTAACAA+AGG | + | chr8_2:48657348-48657367 | None:intergenic | 25.0% |
| ! | CCTTTGTTAATTTATTTCAC+AGG | - | chr8_2:48657345-48657364 | Msa1251990:intron | 25.0% |
| ! | GACAAGCATTTAAACATTAT+GGG | + | chr8_2:48657484-48657503 | None:intergenic | 25.0% |
| !! | TTTTCACAACTTTAGATACA+CGG | - | chr8_2:48657742-48657761 | Msa1251990:intron | 25.0% |
| ! | TTAGCTGTAAAATTTAAGCA+TGG | + | chr8_2:48657850-48657869 | None:intergenic | 25.0% |
| !!! | CAATCATGAATTTTGGTTTA+TGG | - | chr8_2:48658347-48658366 | Msa1251990:CDS | 25.0% |
| !! | TTGATAAACCAGCTAATTTT+TGG | - | chr8_2:48658520-48658539 | Msa1251990:five_prime_UTR | 25.0% |
| ! | TGTTGATATGAATTTACTGT+AGG | - | chr8_2:48658549-48658568 | Msa1251990:five_prime_UTR | 25.0% |
| !!! | AACTTGTTAGCAATTATAGT+TGG | - | chr8_2:48658655-48658674 | Msa1251990:five_prime_UTR | 25.0% |
| ! | GAATTCGGAAAGAGAATTTT+TGG | + | chr8_2:48652284-48652303 | None:intergenic | 30.0% |
| !! | CTGTTAGATTTTGAAGGATT+TGG | + | chr8_2:48652324-48652343 | None:intergenic | 30.0% |
| !!! | GACTCTCTCAAATTTTTTAC+CGG | + | chr8_2:48652824-48652843 | None:intergenic | 30.0% |
| AATACTTGTCAGTAATAACG+CGG | - | chr8_2:48653177-48653196 | Msa1251990:intron | 30.0% | |
| !!! | TTTAAGTTTTTGGGTTGGTT+TGG | - | chr8_2:48653280-48653299 | Msa1251990:intron | 30.0% |
| ATAGTGAAGAATTCTCCAAT+GGG | - | chr8_2:48653319-48653338 | Msa1251990:intron | 30.0% | |
| CTAAGATCAATGTACAACAA+AGG | + | chr8_2:48653358-48653377 | None:intergenic | 30.0% | |
| TAATGAAGATATTGACGCAA+AGG | + | chr8_2:48653420-48653439 | None:intergenic | 30.0% | |
| GTCAATATCTTCATTACAAC+CGG | - | chr8_2:48653424-48653443 | Msa1251990:intron | 30.0% | |
| ATATACAAAACTCCCATTAC+TGG | + | chr8_2:48653794-48653813 | None:intergenic | 30.0% | |
| TCCTATTTCCTACAAAAATG+AGG | - | chr8_2:48653847-48653866 | Msa1251990:intron | 30.0% | |
| !! | TCCTCATTTTTGTAGGAAAT+AGG | + | chr8_2:48653851-48653870 | None:intergenic | 30.0% |
| !! | TGTTTTGTCCTCATTTTTGT+AGG | + | chr8_2:48653858-48653877 | None:intergenic | 30.0% |
| AAAATGAGGACAAAACAGAA+TGG | - | chr8_2:48653861-48653880 | Msa1251990:intron | 30.0% | |
| ! | TTAGTTCTCTGTCATAGAAA+AGG | - | chr8_2:48653904-48653923 | Msa1251990:intron | 30.0% |
| TAGTTCTCTGTCATAGAAAA+GGG | - | chr8_2:48653905-48653924 | Msa1251990:intron | 30.0% | |
| !! | AATTTTGTTGTGGAAAACAG+TGG | + | chr8_2:48653955-48653974 | None:intergenic | 30.0% |
| ! | ACTACACCAAAATTTTGTTG+TGG | + | chr8_2:48653965-48653984 | None:intergenic | 30.0% |
| !! | AGACTTAATTGTTCTAAAGG+AGG | - | chr8_2:48654153-48654172 | Msa1251990:intron | 30.0% |
| CTGGTATTCATAATCAATGT+GGG | - | chr8_2:48654361-48654380 | Msa1251990:intron | 30.0% | |
| TGGTATTCATAATCAATGTG+GGG | - | chr8_2:48654362-48654381 | Msa1251990:intron | 30.0% | |
| !!! | AATGTGGGGTTTTTTGTTTT+GGG | - | chr8_2:48654376-48654395 | Msa1251990:intron | 30.0% |
| CAGCAAAATTAAGGTAACTA+GGG | + | chr8_2:48654504-48654523 | None:intergenic | 30.0% | |
| ACAGCAAAATTAAGGTAACT+AGG | + | chr8_2:48654505-48654524 | None:intergenic | 30.0% | |
| TCTGGAAAACAGCAAAATTA+AGG | + | chr8_2:48654513-48654532 | None:intergenic | 30.0% | |
| AAATAAGTTTCTGCAAGTTC+TGG | + | chr8_2:48654531-48654550 | None:intergenic | 30.0% | |
| AATTAAGATTGCATCTACGT+TGG | + | chr8_2:48654630-48654649 | None:intergenic | 30.0% | |
| ! | TATCTTAGTGGATGAATAAC+TGG | - | chr8_2:48654736-48654755 | Msa1251990:intron | 30.0% |
| TTGAGTCAGAAACTTGAATA+TGG | + | chr8_2:48654909-48654928 | None:intergenic | 30.0% | |
| ! | GTACATCATCTTCATTGATT+TGG | - | chr8_2:48654972-48654991 | Msa1251990:intron | 30.0% |
| ATGAACTAGATTATCAGTTC+AGG | + | chr8_2:48655012-48655031 | None:intergenic | 30.0% | |
| ! | AAATATTTGATCTAGGGTCA+AGG | - | chr8_2:48655052-48655071 | Msa1251990:intron | 30.0% |
| TTGCTATCATCCTCTATATT+AGG | + | chr8_2:48655090-48655109 | None:intergenic | 30.0% | |
| ATAGCAACCAACTGTTATTA+AGG | - | chr8_2:48655103-48655122 | Msa1251990:intron | 30.0% | |
| TAGCAACCAACTGTTATTAA+GGG | - | chr8_2:48655104-48655123 | Msa1251990:intron | 30.0% | |
| ATCTTTCCCTTAATAACAGT+TGG | + | chr8_2:48655113-48655132 | None:intergenic | 30.0% | |
| GTTATTAAGGGAAAGATTGA+CGG | - | chr8_2:48655116-48655135 | Msa1251990:intron | 30.0% | |
| ! | TTGACGGAACAGAATTTTAT+TGG | - | chr8_2:48655132-48655151 | Msa1251990:intron | 30.0% |
| ! | GTGTTTGTTTGTTAGTGAAA+GGG | + | chr8_2:48655290-48655309 | None:intergenic | 30.0% |
| ! | AGTGTTTGTTTGTTAGTGAA+AGG | + | chr8_2:48655291-48655310 | None:intergenic | 30.0% |
| ! | TTTAGGAATTTGAGGTTTGA+GGG | + | chr8_2:48655409-48655428 | None:intergenic | 30.0% |
| TTATTCCTGTTAAACTCCTT+CGG | - | chr8_2:48655500-48655519 | Msa1251990:intron | 30.0% | |
| ATATAGTTGCATTGTTTAGC+AGG | - | chr8_2:48655587-48655606 | Msa1251990:intron | 30.0% | |
| AACACTTTCTAACTCTTAAC+TGG | + | chr8_2:48655620-48655639 | None:intergenic | 30.0% | |
| AACAACAATACAGAACTACA+CGG | + | chr8_2:48655769-48655788 | None:intergenic | 30.0% | |
| TAACAGTTACAATGAGATAG+TGG | + | chr8_2:48655811-48655830 | None:intergenic | 30.0% | |
| ATATTCTATTGAGCTCAATG+AGG | + | chr8_2:48655950-48655969 | None:intergenic | 30.0% | |
| TATGAAATACACCATTCTTC+AGG | - | chr8_2:48655967-48655986 | Msa1251990:intron | 30.0% | |
| ATGAAATACACCATTCTTCA+GGG | - | chr8_2:48655968-48655987 | Msa1251990:intron | 30.0% | |
| AGTAAAGGATAGTAAAATGC+AGG | + | chr8_2:48656002-48656021 | None:intergenic | 30.0% | |
| ATAGTAACATGAACAGTTAG+TGG | + | chr8_2:48656236-48656255 | None:intergenic | 30.0% | |
| ACTGTTCATGTTACTATAAG+CGG | - | chr8_2:48656239-48656258 | Msa1251990:intron | 30.0% | |
| CATACAATATATGGCATTGT+AGG | - | chr8_2:48656285-48656304 | Msa1251990:intron | 30.0% | |
| AAATAACTGACAAGTTCAAG+TGG | + | chr8_2:48656352-48656371 | None:intergenic | 30.0% | |
| TCAATAGAGGAAATGCAATA+AGG | + | chr8_2:48656416-48656435 | None:intergenic | 30.0% | |
| ! | ACTCTATTATACCATTTTGG+TGG | + | chr8_2:48656636-48656655 | None:intergenic | 30.0% |
| ! | TGCACTCTATTATACCATTT+TGG | + | chr8_2:48656639-48656658 | None:intergenic | 30.0% |
| CAATAATTTCACTAGGGATT+TGG | - | chr8_2:48656762-48656781 | Msa1251990:intron | 30.0% | |
| !! | CAATTTGAATCACTTGTTGT+TGG | + | chr8_2:48656829-48656848 | None:intergenic | 30.0% |
| ! | TCAAATGTGTCGTTCATTAT+GGG | - | chr8_2:48657080-48657099 | Msa1251990:CDS | 30.0% |
| CGTGTTTAAATCCAAATAAG+AGG | + | chr8_2:48657222-48657241 | None:intergenic | 30.0% | |
| TATTTGGATTTAAACACGAG+AGG | - | chr8_2:48657224-48657243 | Msa1251990:CDS | 30.0% | |
| GGACAAGCATTTAAACATTA+TGG | + | chr8_2:48657485-48657504 | None:intergenic | 30.0% | |
| !! | TCTAAGGATGTCTTGTTTAA+TGG | - | chr8_2:48657530-48657549 | Msa1251990:intron | 30.0% |
| !! | CTAAGGATGTCTTGTTTAAT+GGG | - | chr8_2:48657531-48657550 | Msa1251990:intron | 30.0% |
| AATCTAACCTATGAAGACTA+GGG | + | chr8_2:48657565-48657584 | None:intergenic | 30.0% | |
| ! | AAATTTACTTTGCTGTCTTC+TGG | - | chr8_2:48657676-48657695 | Msa1251990:intron | 30.0% |
| GTAGATATATGTTCTTGCAA+AGG | - | chr8_2:48657810-48657829 | Msa1251990:intron | 30.0% | |
| ! | TTTTAACCAACGGATAAAAC+TGG | + | chr8_2:48657920-48657939 | None:intergenic | 30.0% |
| !! | TAGTTTCGCATTTTAACCAA+CGG | + | chr8_2:48657930-48657949 | None:intergenic | 30.0% |
| AGAAAGAAAAGGATGATGTT+GGG | + | chr8_2:48658054-48658073 | None:intergenic | 30.0% | |
| AAGAAAGAAAAGGATGATGT+TGG | + | chr8_2:48658055-48658074 | None:intergenic | 30.0% | |
| ATGTGTGATGCTATTATGAA+AGG | + | chr8_2:48658138-48658157 | None:intergenic | 30.0% | |
| CAAAAATGCCAAAAATTAGC+TGG | + | chr8_2:48658531-48658550 | None:intergenic | 30.0% | |
| GATTGGAATAGTTAGAAAAG+TGG | - | chr8_2:48658601-48658620 | Msa1251990:five_prime_UTR | 30.0% | |
| !!! | ATTTTTGGTTGGGAAGAGAA+AGG | + | chr8_2:48652269-48652288 | None:intergenic | 35.0% |
| !!! | CGGAAAGAGAATTTTTGGTT+GGG | + | chr8_2:48652279-48652298 | None:intergenic | 35.0% |
| !!! | TCGGAAAGAGAATTTTTGGT+TGG | + | chr8_2:48652280-48652299 | None:intergenic | 35.0% |
| TAACCCATAACGTTGAATTG+AGG | + | chr8_2:48652633-48652652 | None:intergenic | 35.0% | |
| !! | ATTTACCAACAATTTGGTGC+CGG | - | chr8_2:48652802-48652821 | Msa1251990:intron | 35.0% |
| ! | ATTGTACGTTTTCGGTCTAT+CGG | - | chr8_2:48653068-48653087 | Msa1251990:intron | 35.0% |
| TACAAGCAATAAAGCATGGA+TGG | + | chr8_2:48653204-48653223 | None:intergenic | 35.0% | |
| GATAGTGAAGAATTCTCCAA+TGG | - | chr8_2:48653318-48653337 | Msa1251990:intron | 35.0% | |
| ATGTACAACAAAGGATCGTT+TGG | + | chr8_2:48653349-48653368 | None:intergenic | 35.0% | |
| AATATCTTCATTACAACCGG+TGG | - | chr8_2:48653427-48653446 | Msa1251990:intron | 35.0% | |
| ATTCAATGCGGATAATGAGA+AGG | + | chr8_2:48653548-48653567 | None:intergenic | 35.0% | |
| AGAATATGCAATCTTTGCTG+TGG | + | chr8_2:48653819-48653838 | None:intergenic | 35.0% | |
| ! | TTTGGTGTAGTCTATCTGAA+TGG | - | chr8_2:48653974-48653993 | Msa1251990:intron | 35.0% |
| AATAATACACGAGTTCAGCT+AGG | - | chr8_2:48654274-48654293 | Msa1251990:intron | 35.0% | |
| GTAACTTTATCATTGTCTGC+TGG | - | chr8_2:48654342-48654361 | Msa1251990:intron | 35.0% | |
| GCTGGTATTCATAATCAATG+TGG | - | chr8_2:48654360-48654379 | Msa1251990:intron | 35.0% | |
| !!! | CAATGTGGGGTTTTTTGTTT+TGG | - | chr8_2:48654375-48654394 | Msa1251990:intron | 35.0% |
| TAAAAGAATGCCAGTTAAGC+TGG | - | chr8_2:48654594-48654613 | Msa1251990:intron | 35.0% | |
| ! | TCTAGTTCATCAGCTTAATG+TGG | - | chr8_2:48655022-48655041 | Msa1251990:intron | 35.0% |
| AAACATGCCACCTAATATAG+AGG | - | chr8_2:48655077-48655096 | Msa1251990:intron | 35.0% | |
| CTATCATCCTCTATATTAGG+TGG | + | chr8_2:48655087-48655106 | None:intergenic | 35.0% | |
| TCTGCTAGAGTTGTACAAAA+AGG | + | chr8_2:48655164-48655183 | None:intergenic | 35.0% | |
| TTGTACAACTCTAGCAGATT+TGG | - | chr8_2:48655166-48655185 | Msa1251990:intron | 35.0% | |
| ! | TTGTTTGTTAGTGAAAGGGT+CGG | + | chr8_2:48655286-48655305 | None:intergenic | 35.0% |
| ! | TTAGGAATTTGAGGTTTGAG+GGG | + | chr8_2:48655408-48655427 | None:intergenic | 35.0% |
| ! | CTTTAGGAATTTGAGGTTTG+AGG | + | chr8_2:48655410-48655429 | None:intergenic | 35.0% |
| ! | CAGTCATCTTTAGGAATTTG+AGG | + | chr8_2:48655417-48655436 | None:intergenic | 35.0% |
| CAGGAAAATCAGTCATCTTT+AGG | + | chr8_2:48655426-48655445 | None:intergenic | 35.0% | |
| TGAGTAGTAGATAGCTATTC+AGG | + | chr8_2:48655445-48655464 | None:intergenic | 35.0% | |
| !! | TTTTGGAAAATACTGACCGA+AGG | + | chr8_2:48655519-48655538 | None:intergenic | 35.0% |
| ACTTTCTAACTCTTAACTGG+AGG | + | chr8_2:48655617-48655636 | None:intergenic | 35.0% | |
| ACAACAATACAGAACTACAC+GGG | + | chr8_2:48655768-48655787 | None:intergenic | 35.0% | |
| ! | ATTGTTGTTCTGTGACTAAG+TGG | - | chr8_2:48655780-48655799 | Msa1251990:intron | 35.0% |
| CAGCTTCTGTTAGATTTAGT+TGG | - | chr8_2:48655873-48655892 | Msa1251990:intron | 35.0% | |
| CTACTGACACCATAAATGTT+AGG | - | chr8_2:48655921-48655940 | Msa1251990:intron | 35.0% | |
| ATGAGGAGTCCTAACATTTA+TGG | + | chr8_2:48655933-48655952 | None:intergenic | 35.0% | |
| TTTGCTACGTCAGTAAATCA+AGG | - | chr8_2:48656071-48656090 | Msa1251990:intron | 35.0% | |
| AATATATGGCATTGTAGGCT+AGG | - | chr8_2:48656290-48656309 | Msa1251990:intron | 35.0% | |
| AACTTGTCAGTTATTTGCGA+GGG | - | chr8_2:48656356-48656375 | Msa1251990:intron | 35.0% | |
| TAGATCCAATTTCACACAGA+AGG | + | chr8_2:48656441-48656460 | None:intergenic | 35.0% | |
| CTGATCTGTTTGGACAAATT+TGG | + | chr8_2:48656528-48656547 | None:intergenic | 35.0% | |
| AATTTGTCCAAACAGATCAG+TGG | - | chr8_2:48656528-48656547 | Msa1251990:intron | 35.0% | |
| ATTTGTCCAAACAGATCAGT+GGG | - | chr8_2:48656529-48656548 | Msa1251990:intron | 35.0% | |
| !! | CTATTATACCATTTTGGTGG+TGG | + | chr8_2:48656633-48656652 | None:intergenic | 35.0% |
| AAACTATAGTCAGGAATGCA+TGG | + | chr8_2:48656735-48656754 | None:intergenic | 35.0% | |
| ACCTTCGCAATAATTTCACT+AGG | - | chr8_2:48656755-48656774 | Msa1251990:intron | 35.0% | |
| CCTTCGCAATAATTTCACTA+GGG | - | chr8_2:48656756-48656775 | Msa1251990:intron | 35.0% | |
| !! | TTGAATCACTTGTTGTTGGA+CGG | + | chr8_2:48656825-48656844 | None:intergenic | 35.0% |
| !! | AATATATTGACTTGGGAGTG+AGG | + | chr8_2:48656955-48656974 | None:intergenic | 35.0% |
| ! | GTCAAATGTGTCGTTCATTA+TGG | - | chr8_2:48657079-48657098 | Msa1251990:CDS | 35.0% |
| TCTCACCACTAAATCTCAAT+GGG | + | chr8_2:48657184-48657203 | None:intergenic | 35.0% | |
| ATCTCACCACTAAATCTCAA+TGG | + | chr8_2:48657185-48657204 | None:intergenic | 35.0% | |
| CAAATAAGAGGGGATTATCT+TGG | + | chr8_2:48657210-48657229 | None:intergenic | 35.0% | |
| CAAGATAATCCCCTCTTATT+TGG | - | chr8_2:48657208-48657227 | Msa1251990:CDS | 35.0% | |
| AAACTGTTGTAAGGAAGGAA+TGG | + | chr8_2:48657280-48657299 | None:intergenic | 35.0% | |
| ! | CTTTAGAAAGCTACAGTAAG+GGG | + | chr8_2:48657372-48657391 | None:intergenic | 35.0% |
| ! | CCTTTAGAAAGCTACAGTAA+GGG | + | chr8_2:48657373-48657392 | None:intergenic | 35.0% |
| ! | ACCTTTAGAAAGCTACAGTA+AGG | + | chr8_2:48657374-48657393 | None:intergenic | 35.0% |
| AGAAATGTACATTCGATGCA+AGG | + | chr8_2:48657447-48657466 | None:intergenic | 35.0% | |
| TGCATCGAATGTACATTTCT+TGG | - | chr8_2:48657447-48657466 | Msa1251990:intron | 35.0% | |
| GTTTAAATGCTTGTCCCATA+TGG | - | chr8_2:48657489-48657508 | Msa1251990:intron | 35.0% | |
| GGGTCTACATTTCTAATCTA+AGG | - | chr8_2:48657514-48657533 | Msa1251990:intron | 35.0% | |
| !! | GATGTCTTGTTTAATGGGTT+TGG | - | chr8_2:48657536-48657555 | Msa1251990:intron | 35.0% |
| GAATCTAACCTATGAAGACT+AGG | + | chr8_2:48657566-48657585 | None:intergenic | 35.0% | |
| AAAAATAGGGATAGAGGATC+TGG | + | chr8_2:48657598-48657617 | None:intergenic | 35.0% | |
| GCTGTAAAATTTAAGCATGG+AGG | + | chr8_2:48657847-48657866 | None:intergenic | 35.0% | |
| TAGTCTGGACAAGAAAGAAA+AGG | + | chr8_2:48658065-48658084 | None:intergenic | 35.0% | |
| ! | CTGTCGACAATCATGAATTT+TGG | - | chr8_2:48658340-48658359 | Msa1251990:CDS | 35.0% |
| ! | TTGAACTATGATAACGCTGT+GGG | - | chr8_2:48658375-48658394 | Msa1251990:CDS | 35.0% |
| ATTCCAAGCCTATAGTGTAA+AGG | + | chr8_2:48658497-48658516 | None:intergenic | 35.0% | |
| TTACTGTAGGATTCATACCT+TGG | - | chr8_2:48658562-48658581 | Msa1251990:five_prime_UTR | 35.0% | |
| TTCATACCTTGGACCATTTA+TGG | - | chr8_2:48658573-48658592 | Msa1251990:five_prime_UTR | 35.0% | |
| TTCCAATCGATCTCCATAAA+TGG | + | chr8_2:48658589-48658608 | None:intergenic | 35.0% | |
| ATAGTTAGAAAAGTGGTCTG+TGG | - | chr8_2:48658608-48658627 | Msa1251990:five_prime_UTR | 35.0% | |
| !!! | TTTTTTTAGCGCGAAGACGA+AGG | + | chr8_2:48652217-48652236 | None:intergenic | 40.0% |
| !! | AGAGGATTGGTTGAATGTGT+TGG | + | chr8_2:48652242-48652261 | None:intergenic | 40.0% |
| AGAGAAAGGAAAGAGAGGAT+TGG | + | chr8_2:48652255-48652274 | None:intergenic | 40.0% | |
| !! | TACCGATTTCTTCATGCTAC+CGG | + | chr8_2:48652505-48652524 | None:intergenic | 40.0% |
| GCATGAAGAAATCGGTACAT+TGG | - | chr8_2:48652508-48652527 | Msa1251990:CDS | 40.0% | |
| TTGGAGTCCTGAATTGGTTA+CGG | - | chr8_2:48652527-48652546 | Msa1251990:CDS | 40.0% | |
| ! | GTTGATTCCGTAACCAATTC+AGG | + | chr8_2:48652537-48652556 | None:intergenic | 40.0% |
| ATAACGTTGAATTGAGGAGG+AGG | + | chr8_2:48652627-48652646 | None:intergenic | 40.0% | |
| TCCTCCTCAATTCAACGTTA+TGG | - | chr8_2:48652626-48652645 | Msa1251990:intron | 40.0% | |
| CCTCCTCAATTCAACGTTAT+GGG | - | chr8_2:48652627-48652646 | Msa1251990:intron | 40.0% | |
| ! | GGCACCAAATTGTTGGTAAA+TGG | + | chr8_2:48652803-48652822 | None:intergenic | 40.0% |
| ! | TTTTACCGGCACCAAATTGT+TGG | + | chr8_2:48652810-48652829 | None:intergenic | 40.0% |
| TTTGTAAGACGCTCTCGAAT+AGG | + | chr8_2:48652880-48652899 | None:intergenic | 40.0% | |
| !! | GAGAGCGTCTTACAAAGTTA+GGG | - | chr8_2:48652884-48652903 | Msa1251990:intron | 40.0% |
| ! | TTGCTGATTGTGATCAGAGA+CGG | - | chr8_2:48652952-48652971 | Msa1251990:intron | 40.0% |
| ! | TTGGCAGCATTGTACGTTTT+CGG | - | chr8_2:48653060-48653079 | Msa1251990:intron | 40.0% |
| GTCGTACAAGCAATAAAGCA+TGG | + | chr8_2:48653208-48653227 | None:intergenic | 40.0% | |
| GAACAGTGTCAAATGTACTC+AGG | + | chr8_2:48653718-48653737 | None:intergenic | 40.0% | |
| TTGACACTGTTCCAGAAGAA+CGG | - | chr8_2:48653726-48653745 | Msa1251990:intron | 40.0% | |
| GTAGCATTAGACAGTTAGTG+TGG | - | chr8_2:48654398-48654417 | Msa1251990:intron | 40.0% | |
| TGAATACAGTCCAGCTTAAC+TGG | + | chr8_2:48654607-48654626 | None:intergenic | 40.0% | |
| ATGGATGTCAGCTATCTTAG+TGG | - | chr8_2:48654724-48654743 | Msa1251990:intron | 40.0% | |
| !!! | GATTTTGGCTTTACTTGTCC+CGG | + | chr8_2:48654824-48654843 | None:intergenic | 40.0% |
| TACATTCTCCAACAGATTCC+TGG | + | chr8_2:48654955-48654974 | None:intergenic | 40.0% | |
| AGAGATGAGAGGTCTATAGA+TGG | + | chr8_2:48655258-48655277 | None:intergenic | 40.0% | |
| ! | TGTTTGTTAGTGAAAGGGTC+GGG | + | chr8_2:48655285-48655304 | None:intergenic | 40.0% |
| ! | GTCAGTATTTTCCAAAAGCG+TGG | - | chr8_2:48655522-48655541 | Msa1251990:intron | 40.0% |
| AGTCAGTCATAGTCTGTCAA+CGG | - | chr8_2:48655837-48655856 | Msa1251990:intron | 40.0% | |
| TTACTGACGTAGCAAATACC+AGG | + | chr8_2:48656067-48656086 | None:intergenic | 40.0% | |
| GGAACAGACTGAAAGAATAG+AGG | + | chr8_2:48656099-48656118 | None:intergenic | 40.0% | |
| GGATTTGTGGAGGAAAGTAA+AGG | + | chr8_2:48656120-48656139 | None:intergenic | 40.0% | |
| ! | TTTTCTGTGAGGATTTGTGG+AGG | + | chr8_2:48656130-48656149 | None:intergenic | 40.0% |
| ! | AGGTTTTCTGTGAGGATTTG+TGG | + | chr8_2:48656133-48656152 | None:intergenic | 40.0% |
| AGTACTACATAGCTGTGTGA+AGG | + | chr8_2:48656317-48656336 | None:intergenic | 40.0% | |
| AACTGACAAGTTCAAGTGGT+TGG | + | chr8_2:48656348-48656367 | None:intergenic | 40.0% | |
| GAACTTGTCAGTTATTTGCG+AGG | - | chr8_2:48656355-48656374 | Msa1251990:intron | 40.0% | |
| TGATGCCTTCTGTGTGAAAT+TGG | - | chr8_2:48656433-48656452 | Msa1251990:intron | 40.0% | |
| ATCTACTAATCTGTCCCTAC+AGG | - | chr8_2:48656597-48656616 | Msa1251990:intron | 40.0% | |
| !!! | TATACCATTTTGGTGGTGGT+GGG | + | chr8_2:48656629-48656648 | None:intergenic | 40.0% |
| !!! | TTATACCATTTTGGTGGTGG+TGG | + | chr8_2:48656630-48656649 | None:intergenic | 40.0% |
| TTCCTTGCCCTTCAAATTGT+GGG | - | chr8_2:48656708-48656727 | Msa1251990:intron | 40.0% | |
| TGCGAAGGTAAACTATAGTC+AGG | + | chr8_2:48656744-48656763 | None:intergenic | 40.0% | |
| CCCTAGTGAAATTATTGCGA+AGG | + | chr8_2:48656759-48656778 | None:intergenic | 40.0% | |
| ! | GACAGAGGGAGTAGTTATTT+TGG | - | chr8_2:48657102-48657121 | Msa1251990:CDS | 40.0% |
| TGAGACCCATTGAGATTTAG+TGG | - | chr8_2:48657176-48657195 | Msa1251990:CDS | 40.0% | |
| TTGTAAGGAAGGAATGGTTC+TGG | + | chr8_2:48657274-48657293 | None:intergenic | 40.0% | |
| CATCGTTTACAGATGTAGCA+GGG | + | chr8_2:48657319-48657338 | None:intergenic | 40.0% | |
| TCATCGTTTACAGATGTAGC+AGG | + | chr8_2:48657320-48657339 | None:intergenic | 40.0% | |
| CCCTTACTGTAGCTTTCTAA+AGG | - | chr8_2:48657370-48657389 | Msa1251990:intron | 40.0% | |
| AAATGTAGACCCTGCCATAT+GGG | + | chr8_2:48657506-48657525 | None:intergenic | 40.0% | |
| ! | TTGGTTTCCCTAGTCTTCAT+AGG | - | chr8_2:48657555-48657574 | Msa1251990:intron | 40.0% |
| ACAGAAGCTGGGCAAAAATA+GGG | + | chr8_2:48657611-48657630 | None:intergenic | 40.0% | |
| TACAGAAGCTGGGCAAAAAT+AGG | + | chr8_2:48657612-48657631 | None:intergenic | 40.0% | |
| AATTGACACAGAACAGCCAA+CGG | + | chr8_2:48657636-48657655 | None:intergenic | 40.0% | |
| AACTTTAGATACACGGTCTC+TGG | - | chr8_2:48657749-48657768 | Msa1251990:intron | 40.0% | |
| TAACCAACGGATAAAACTGG+AGG | + | chr8_2:48657917-48657936 | None:intergenic | 40.0% | |
| GTTCTGCATTTCATGGCTTT+CGG | - | chr8_2:48657974-48657993 | Msa1251990:intron | 40.0% | |
| GCGTATTATGTGATGATTGC+AGG | - | chr8_2:48658233-48658252 | Msa1251990:intron | 40.0% | |
| !! | GGATTGGCTGTATTAGATGA+AGG | + | chr8_2:48658294-48658313 | None:intergenic | 40.0% |
| ! | GATGTACTTTTCAGCAGGAT+TGG | + | chr8_2:48658310-48658329 | None:intergenic | 40.0% |
| ! | ACTTGGATGTACTTTTCAGC+AGG | + | chr8_2:48658315-48658334 | None:intergenic | 40.0% |
| ! | CTTGAACTATGATAACGCTG+TGG | - | chr8_2:48658374-48658393 | Msa1251990:CDS | 40.0% |
| AAGGCGTGACATATATTTGC+TGG | + | chr8_2:48658478-48658497 | None:intergenic | 40.0% | |
| ATGTCACGCCTTTACACTAT+AGG | - | chr8_2:48658486-48658505 | Msa1251990:CDS | 40.0% | |
| GACCATTTATGGAGATCGAT+TGG | - | chr8_2:48658584-48658603 | Msa1251990:five_prime_UTR | 40.0% | |
| TGGGAAGAGAAAGGAAAGAG+AGG | + | chr8_2:48652260-48652279 | None:intergenic | 45.0% | |
| ! | ACCGATTTCTTCATGCTACC+GGG | + | chr8_2:48652504-48652523 | None:intergenic | 45.0% |
| GGTACATTGGAGTCCTGAAT+TGG | - | chr8_2:48652521-48652540 | Msa1251990:CDS | 45.0% | |
| GTATTCGAACGGTGTTCATG+AGG | + | chr8_2:48652573-48652592 | None:intergenic | 45.0% | |
| CCCATAACGTTGAATTGAGG+AGG | + | chr8_2:48652630-48652649 | None:intergenic | 45.0% | |
| !! | CGAGAGCGTCTTACAAAGTT+AGG | - | chr8_2:48652883-48652902 | Msa1251990:intron | 45.0% |
| GTGACTGTTCGTAATGTGCT+GGG | - | chr8_2:48652977-48652996 | Msa1251990:intron | 45.0% | |
| TTCGTAATGTGCTGGGAAGA+TGG | - | chr8_2:48652984-48653003 | Msa1251990:intron | 45.0% | |
| TCGTAATGTGCTGGGAAGAT+GGG | - | chr8_2:48652985-48653004 | Msa1251990:intron | 45.0% | |
| AGACTCTCGCTGGAAATACT+TGG | - | chr8_2:48653041-48653060 | Msa1251990:intron | 45.0% | |
| GGATCGTTTGGTATACCCAT+TGG | + | chr8_2:48653337-48653356 | None:intergenic | 45.0% | |
| GATACACTCACTACAACCAC+CGG | + | chr8_2:48653446-48653465 | None:intergenic | 45.0% | |
| CAATGCGGATAATGAGAAGG+TGG | + | chr8_2:48653545-48653564 | None:intergenic | 45.0% | |
| AGTGAAAACAAGCCCTAGCA+TGG | - | chr8_2:48653622-48653641 | Msa1251990:intron | 45.0% | |
| AAGAATTGCGCAGGGAACAA+AGG | - | chr8_2:48653661-48653680 | Msa1251990:intron | 45.0% | |
| TCTCATATCCACCTTCTGCT+AGG | + | chr8_2:48653688-48653707 | None:intergenic | 45.0% | |
| !!! | GAGTTTTGAAGCCGTTCTTC+TGG | + | chr8_2:48653740-48653759 | None:intergenic | 45.0% |
| TGTTATCTATCCACGTCAGC+TGG | - | chr8_2:48653767-48653786 | Msa1251990:intron | 45.0% | |
| ACTGACCGAAGGAGTTTAAC+AGG | + | chr8_2:48655508-48655527 | None:intergenic | 45.0% | |
| TAATCCAGGTTTCCCCCTTA+AGG | + | chr8_2:48655551-48655570 | None:intergenic | 45.0% | |
| TCTAACTCTTAACTGGAGGC+TGG | + | chr8_2:48655613-48655632 | None:intergenic | 45.0% | |
| GGAGAGAAATCCCTGAAGAA+TGG | + | chr8_2:48655981-48656000 | None:intergenic | 45.0% | |
| ! | AGTGGGAAAGGTTTTCTGTG+AGG | + | chr8_2:48656141-48656160 | None:intergenic | 45.0% |
| ACAGAAAACCTTTCCCACTC+TGG | - | chr8_2:48656142-48656161 | Msa1251990:intron | 45.0% | |
| CCACTACAGAAAGTCAGCAT+AGG | + | chr8_2:48656388-48656407 | None:intergenic | 45.0% | |
| !! | CCTATGCTGACTTTCTGTAG+TGG | - | chr8_2:48656385-48656404 | Msa1251990:intron | 45.0% |
| !! | CACACAGAAGGCATCAATAG+AGG | + | chr8_2:48656429-48656448 | None:intergenic | 45.0% |
| AACTCACCCACTGATCTGTT+TGG | + | chr8_2:48656538-48656557 | None:intergenic | 45.0% | |
| TGCACTTACACAGTTCAAGC+TGG | - | chr8_2:48656659-48656678 | Msa1251990:intron | 45.0% | |
| TTTGAAGGGCAAGGAAGCTT+GGG | + | chr8_2:48656704-48656723 | None:intergenic | 45.0% | |
| ATTTGAAGGGCAAGGAAGCT+TGG | + | chr8_2:48656705-48656724 | None:intergenic | 45.0% | |
| CTTCCTTGCCCTTCAAATTG+TGG | - | chr8_2:48656707-48656726 | Msa1251990:intron | 45.0% | |
| GCATGGTCCCACAATTTGAA+GGG | + | chr8_2:48656718-48656737 | None:intergenic | 45.0% | |
| TGCATGGTCCCACAATTTGA+AGG | + | chr8_2:48656719-48656738 | None:intergenic | 45.0% | |
| ATGTTGGATTCCAACAGGAG+AGG | + | chr8_2:48656790-48656809 | None:intergenic | 45.0% | |
| TCCTGTTGGAATCCAACATG+AGG | - | chr8_2:48656791-48656810 | Msa1251990:intron | 45.0% | |
| ACCTCATGTTGGATTCCAAC+AGG | + | chr8_2:48656795-48656814 | None:intergenic | 45.0% | |
| !! | ATCACTTGTTGTTGGACGGA+AGG | + | chr8_2:48656821-48656840 | None:intergenic | 45.0% |
| TGTCGTTCATTATGGGACAG+AGG | - | chr8_2:48657087-48657106 | Msa1251990:CDS | 45.0% | |
| GTCGTTCATTATGGGACAGA+GGG | - | chr8_2:48657088-48657107 | Msa1251990:CDS | 45.0% | |
| !! | GAATGGTTCTGGATGCACTA+GGG | + | chr8_2:48657263-48657282 | None:intergenic | 45.0% |
| AAATGCTTGTCCCATATGGC+AGG | - | chr8_2:48657493-48657512 | Msa1251990:intron | 45.0% | |
| AATGCTTGTCCCATATGGCA+GGG | - | chr8_2:48657494-48657513 | Msa1251990:intron | 45.0% | |
| GAAATGTAGACCCTGCCATA+TGG | + | chr8_2:48657507-48657526 | None:intergenic | 45.0% | |
| CTGGGCAAAAATAGGGATAG+AGG | + | chr8_2:48657604-48657623 | None:intergenic | 45.0% | |
| !! | ATGCCTCCAGTTTTATCCGT+TGG | - | chr8_2:48657911-48657930 | Msa1251990:intron | 45.0% |
| CTGCTCTGTTCTGCATTTCA+TGG | - | chr8_2:48657967-48657986 | Msa1251990:intron | 45.0% | |
| !!! | ACTGCTTTTAGCTCATGCAG+TGG | + | chr8_2:48658267-48658286 | None:intergenic | 45.0% |
| GATTGTCGACAGAGATCACT+TGG | + | chr8_2:48658332-48658351 | None:intergenic | 45.0% | |
| ACGCCTTTACACTATAGGCT+TGG | - | chr8_2:48658491-48658510 | Msa1251990:CDS | 45.0% | |
| CGATCTCCATAAATGGTCCA+AGG | + | chr8_2:48658582-48658601 | None:intergenic | 45.0% | |
| CTTCGGTTGTTCCATGATGG+CGG | + | chr8_2:48652379-48652398 | None:intergenic | 50.0% | |
| CATCATGGAACAACCGAAGC+CGG | - | chr8_2:48652380-48652399 | Msa1251990:three_prime_UTR | 50.0% | |
| !! | GGAGTTTCGGTGTTCGTTTC+CGG | + | chr8_2:48652402-48652421 | None:intergenic | 50.0% |
| ACCGAAACTCCCATCCCAAA+CGG | - | chr8_2:48652411-48652430 | Msa1251990:three_prime_UTR | 50.0% | |
| ! | TCCGTTTGGGATGGGAGTTT+CGG | + | chr8_2:48652415-48652434 | None:intergenic | 50.0% |
| GCCCGGTAGCATGAAGAAAT+CGG | - | chr8_2:48652500-48652519 | Msa1251990:CDS | 50.0% | |
| GGAGGAGGTTGAGAGAAAGA+AGG | + | chr8_2:48652612-48652631 | None:intergenic | 50.0% | |
| CTGATTGTGATCAGAGACGG+TGG | - | chr8_2:48652955-48652974 | Msa1251990:intron | 50.0% | |
| GGTGACTGTTCGTAATGTGC+TGG | - | chr8_2:48652976-48652995 | Msa1251990:intron | 50.0% | |
| CGTAATGTGCTGGGAAGATG+GGG | - | chr8_2:48652986-48653005 | Msa1251990:intron | 50.0% | |
| TAGCAGCTTCAGCCATGCTA+GGG | + | chr8_2:48653637-48653656 | None:intergenic | 50.0% | |
| ATAGCAGCTTCAGCCATGCT+AGG | + | chr8_2:48653638-48653657 | None:intergenic | 50.0% | |
| TAGCATGGCTGAAGCTGCTA+TGG | - | chr8_2:48653637-48653656 | Msa1251990:intron | 50.0% | |
| AGCATGGCTGAAGCTGCTAT+GGG | - | chr8_2:48653638-48653657 | Msa1251990:intron | 50.0% | |
| TGCTATGGGAAGAATTGCGC+AGG | - | chr8_2:48653652-48653671 | Msa1251990:intron | 50.0% | |
| GCTATGGGAAGAATTGCGCA+GGG | - | chr8_2:48653653-48653672 | Msa1251990:intron | 50.0% | |
| GGAACAAAGGTCCTAGCAGA+AGG | - | chr8_2:48653674-48653693 | Msa1251990:intron | 50.0% | |
| ACAAAGGTCCTAGCAGAAGG+TGG | - | chr8_2:48653677-48653696 | Msa1251990:intron | 50.0% | |
| ACGTCAGCTGGTCCAGTAAT+GGG | - | chr8_2:48653779-48653798 | Msa1251990:intron | 50.0% | |
| ATGTGCTGCCAGGAATCTGT+TGG | - | chr8_2:48654944-48654963 | Msa1251990:intron | 50.0% | |
| ! | CAAAAGCGTGGCCACCTTAA+GGG | - | chr8_2:48655534-48655553 | Msa1251990:intron | 50.0% |
| ! | AAAAGCGTGGCCACCTTAAG+GGG | - | chr8_2:48655535-48655554 | Msa1251990:intron | 50.0% |
| TTGAGAGACCAGAGTGGGAA+AGG | + | chr8_2:48656153-48656172 | None:intergenic | 50.0% | |
| CAGAAAGTCAGCATAGGTGC+AGG | + | chr8_2:48656382-48656401 | None:intergenic | 50.0% | |
| TACTCCCACCACCACCAAAA+TGG | - | chr8_2:48656622-48656641 | Msa1251990:intron | 50.0% | |
| GTCCCACAATTTGAAGGGCA+AGG | + | chr8_2:48656713-48656732 | None:intergenic | 50.0% | |
| GGATTTGGATCCTCTCCTGT+TGG | - | chr8_2:48656777-48656796 | Msa1251990:intron | 50.0% | |
| !! | ACGGAAGGAGTACCTCATGT+TGG | + | chr8_2:48656806-48656825 | None:intergenic | 50.0% |
| !! | GGAATGGTTCTGGATGCACT+AGG | + | chr8_2:48657264-48657283 | None:intergenic | 50.0% |
| AGCCAACGGTTACAGAAGCT+GGG | + | chr8_2:48657622-48657641 | None:intergenic | 50.0% | |
| GCAGACTCATTACTGCTCTC+TGG | - | chr8_2:48657705-48657724 | Msa1251990:intron | 50.0% | |
| CTGCTTGAAGTGCATCTTGC+AGG | + | chr8_2:48658404-48658423 | None:intergenic | 50.0% | |
| CTGCAAGATGCACTTCAAGC+AGG | - | chr8_2:48658402-48658421 | Msa1251990:CDS | 50.0% | |
| CGGCTTCGGTTGTTCCATGA+TGG | + | chr8_2:48652382-48652401 | None:intergenic | 55.0% | |
| ! | TCGGTGTTCGTTTCCGGCTT+CGG | + | chr8_2:48652396-48652415 | None:intergenic | 55.0% |
| GGATCCGACTCCCTTTGTTG+CGG | + | chr8_2:48652445-48652464 | None:intergenic | 55.0% | |
| GCAACAAAGGGAGTCGGATC+CGG | - | chr8_2:48652444-48652463 | Msa1251990:exon | 55.0% | |
| AGTCGGATCCGGATCTGGAT+CGG | - | chr8_2:48652455-48652474 | Msa1251990:CDS | 55.0% | |
| TAGCGGTTCCGATCCAGATC+CGG | + | chr8_2:48652466-48652485 | None:intergenic | 55.0% | |
| TTCTTCATGCTACCGGGCGA+TGG | + | chr8_2:48652498-48652517 | None:intergenic | 55.0% | |
| ATGTGCTGGGAAGATGGGGT+AGG | - | chr8_2:48652990-48653009 | Msa1251990:intron | 55.0% | |
| GGAAGATGGGGTAGGAAGGT+GGG | - | chr8_2:48652998-48653017 | Msa1251990:intron | 55.0% | |
| GGTGGGAGAGGCAACTAAGA+AGG | - | chr8_2:48653015-48653034 | Msa1251990:intron | 55.0% | |
| AAGAAGGCTGAGACTCTCGC+TGG | - | chr8_2:48653031-48653050 | Msa1251990:intron | 55.0% | |
| CATTACTGGACCAGCTGACG+TGG | + | chr8_2:48653780-48653799 | None:intergenic | 55.0% | |
| CACGTCAGCTGGTCCAGTAA+TGG | - | chr8_2:48653778-48653797 | Msa1251990:intron | 55.0% | |
| AGCTAGAGTCATGTGCTGCC+AGG | - | chr8_2:48654934-48654953 | Msa1251990:intron | 55.0% | |
| ! | CCTTAAGGTGGCCACGCTTT+TGG | + | chr8_2:48655536-48655555 | None:intergenic | 55.0% |
| ! | CCAAAAGCGTGGCCACCTTA+AGG | - | chr8_2:48655533-48655552 | Msa1251990:intron | 55.0% |
| AAAGCGTGGCCACCTTAAGG+GGG | - | chr8_2:48655536-48655555 | Msa1251990:intron | 55.0% | |
| TCCAGGTTTCCCCCTTAAGG+TGG | + | chr8_2:48655548-48655567 | None:intergenic | 55.0% | |
| ! | GATATCGAGAGCATGCGTCC+TGG | - | chr8_2:48656046-48656065 | Msa1251990:intron | 55.0% |
| GTGCGTTGAGAGACCAGAGT+GGG | + | chr8_2:48656158-48656177 | None:intergenic | 55.0% | |
| AGTGCGTTGAGAGACCAGAG+TGG | + | chr8_2:48656159-48656178 | None:intergenic | 55.0% | |
| ! | GTGGTGGGAGTATGCCTGTA+GGG | + | chr8_2:48656614-48656633 | None:intergenic | 55.0% |
| AGGGATAGAGGATCTGGTCG+AGG | + | chr8_2:48657592-48657611 | None:intergenic | 55.0% | |
| TGCCCAGCTTCTGTAACCGT+TGG | - | chr8_2:48657617-48657636 | Msa1251990:intron | 55.0% | |
| CAGCCAACGGTTACAGAAGC+TGG | + | chr8_2:48657623-48657642 | None:intergenic | 55.0% | |
| TCCGACTCCCTTTGTTGCGG+CGG | + | chr8_2:48652442-48652461 | None:intergenic | 60.0% | |
| AAGGGAGTCGGATCCGGATC+TGG | - | chr8_2:48652450-48652469 | Msa1251990:CDS | 60.0% | |
| GGATCTGGATCGGAACCGCT+AGG | - | chr8_2:48652465-48652484 | Msa1251990:CDS | 60.0% | |
| TGGATCGGAACCGCTAGGCA+CGG | - | chr8_2:48652470-48652489 | Msa1251990:CDS | 60.0% | |
| GCTGGGAAGATGGGGTAGGA+AGG | - | chr8_2:48652994-48653013 | Msa1251990:intron | 60.0% | |
| GGGAAGATGGGGTAGGAAGG+TGG | - | chr8_2:48652997-48653016 | Msa1251990:intron | 60.0% | |
| ATGGGGTAGGAAGGTGGGAG+AGG | - | chr8_2:48653003-48653022 | Msa1251990:intron | 60.0% | |
| GGTCGGGCTCAAGAGATGAG+AGG | + | chr8_2:48655269-48655288 | None:intergenic | 60.0% | |
| GCCACCTTAAGGGGGAAACC+TGG | - | chr8_2:48655544-48655563 | Msa1251990:intron | 60.0% | |
| !! | GGTGGTGGGAGTATGCCTGT+AGG | + | chr8_2:48656615-48656634 | None:intergenic | 60.0% |
| GCTTTCACGCGCCGCCATCA+TGG | - | chr8_2:48652365-48652384 | Msa1251990:three_prime_UTR | 65.0% | |
| ! | GCGGCGTCTCCGTTTGGGAT+GGG | + | chr8_2:48652423-48652442 | None:intergenic | 65.0% |
| TTGCGGCGGCGTCTCCGTTT+GGG | + | chr8_2:48652428-48652447 | None:intergenic | 65.0% | |
| GGAGACGCCGCCGCAACAAA+GGG | - | chr8_2:48652432-48652451 | Msa1251990:exon | 65.0% | |
| GCCGCCGCAACAAAGGGAGT+CGG | - | chr8_2:48652438-48652457 | Msa1251990:exon | 65.0% | |
| GGCGATGGTTCCGTGCCTAG+CGG | + | chr8_2:48652483-48652502 | None:intergenic | 65.0% | |
| CTAGGCACGGAACCATCGCC+CGG | - | chr8_2:48652483-48652502 | Msa1251990:CDS | 65.0% | |
| ! | GCGCGTGAAAGCGCGTGTCG+TGG | + | chr8_2:48652357-48652376 | None:intergenic | 70.0% |
| GGCGGCGTCTCCGTTTGGGA+TGG | + | chr8_2:48652424-48652443 | None:intergenic | 70.0% | |
| GTTGCGGCGGCGTCTCCGTT+TGG | + | chr8_2:48652429-48652448 | None:intergenic | 70.0% | |
| CGGAGACGCCGCCGCAACAA+AGG | - | chr8_2:48652431-48652450 | Msa1251990:exon | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 48652200 | 48658698 | 48652200 | ID=Msa1251990;Name=Msa1251990 |
| chr8_2 | mRNA | 48652200 | 48658698 | 48652200 | ID=Msa1251990-mRNA-1;Parent=Msa1251990;Name=Msa1251990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=184|0.5|1|1|1|1|3|249|243 |
| chr8_2 | exon | 48652200 | 48652643 | 48652200 | ID=Msa1251990-mRNA-1:exon:14683;Parent=Msa1251990-mRNA-1 |
| chr8_2 | exon | 48657003 | 48657274 | 48657003 | ID=Msa1251990-mRNA-1:exon:14682;Parent=Msa1251990-mRNA-1 |
| chr8_2 | exon | 48658250 | 48658698 | 48658250 | ID=Msa1251990-mRNA-1:exon:14681;Parent=Msa1251990-mRNA-1 |
| chr8_2 | five_prime_UTR | 48658515 | 48658698 | 48658515 | ID=Msa1251990-mRNA-1:five_prime_utr;Parent=Msa1251990-mRNA-1 |
| chr8_2 | CDS | 48658250 | 48658514 | 48658250 | ID=Msa1251990-mRNA-1:cds;Parent=Msa1251990-mRNA-1 |
| chr8_2 | CDS | 48657003 | 48657274 | 48657003 | ID=Msa1251990-mRNA-1:cds;Parent=Msa1251990-mRNA-1 |
| chr8_2 | CDS | 48652449 | 48652643 | 48652449 | ID=Msa1251990-mRNA-1:cds;Parent=Msa1251990-mRNA-1 |
| chr8_2 | three_prime_UTR | 48652200 | 48652448 | 48652200 | ID=Msa1251990-mRNA-1:three_prime_utr;Parent=Msa1251990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
