AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0269560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269560 MtrunA17_Chr3g0115251 98.987 395 3 1 1 395 1 394 0.0 814
Msa0269560 MtrunA17_Chr4g0024631 63.452 394 136 3 9 395 15 407 0.0 528
Msa0269560 MtrunA17_Chr2g0322591 62.308 390 142 3 9 395 15 402 0.0 513
Msa0269560 MtrunA17_Chr4g0004991 71.181 288 83 0 108 395 7 294 3.53e-160 452
Msa0269560 MtrunA17_Chr4g0017871 73.770 244 64 0 150 393 4 247 2.12e-147 417
Msa0269560 MtrunA17_Chr5g0396961 41.389 360 169 7 16 373 23 342 1.17e-85 264
Msa0269560 MtrunA17_Chr3g0126221 39.024 369 180 8 7 373 17 342 2.29e-82 255
Msa0269560 MtrunA17_Chr1g0149521 38.788 330 178 5 16 344 30 336 5.64e-73 231
Msa0269560 MtrunA17_Chr8g0360581 36.071 280 163 8 106 382 62 328 1.38e-50 173
Msa0269560 MtrunA17_Chr2g0316241 34.752 282 167 7 102 380 53 320 1.94e-49 170
Msa0269560 MtrunA17_Chr4g0017861 39.490 157 80 4 10 163 17 161 3.88e-27 106
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0269560 AT1G77810.2 71.537 397 98 7 1 395 1 384 0.0 584
Msa0269560 AT1G77810.1 71.000 400 98 8 1 395 1 387 0.0 578
Msa0269560 AT1G05170.2 63.198 394 137 3 9 395 15 407 0.0 535
Msa0269560 AT1G22015.1 64.541 392 135 4 3 393 5 393 0.0 528
Msa0269560 AT1G32930.1 61.111 396 143 3 5 395 10 399 0.0 518
Msa0269560 AT1G33430.1 63.185 383 132 4 10 387 7 385 1.31e-180 508
Msa0269560 AT2G32430.1 61.929 394 143 2 9 395 16 409 1.34e-180 508
Msa0269560 AT4G26940.1 62.404 391 141 4 9 395 19 407 6.83e-178 501
Msa0269560 AT1G33430.2 61.893 391 132 5 10 387 7 393 1.52e-177 500
Msa0269560 AT1G11730.1 60.104 386 133 6 9 393 17 382 9.92e-165 467
Msa0269560 AT1G05170.1 61.159 345 126 3 9 346 15 358 3.67e-157 447
Msa0269560 AT1G33430.3 59.804 306 114 4 10 310 7 308 3.30e-126 366
Msa0269560 AT4G26940.2 56.061 264 111 3 9 268 19 281 3.49e-93 282
Msa0269560 AT5G53340.2 39.818 329 175 6 16 342 19 326 1.28e-80 251
Msa0269560 AT5G53340.1 38.905 347 182 8 16 360 19 337 1.32e-80 251
Msa0269560 AT2G25300.1 40.060 332 170 8 16 344 31 336 3.33e-73 232
Msa0269560 AT2G25300.2 45.560 259 132 4 87 344 8 258 5.70e-73 229
Msa0269560 AT4G32120.1 38.554 332 175 6 16 344 30 335 4.60e-72 229
Msa0269560 AT1G53290.1 35.273 275 161 7 111 382 71 331 4.84e-50 172
Msa0269560 AT3G14960.1 35.472 265 154 7 119 380 77 327 1.15e-48 168
Msa0269560 AT2G26100.1 36.502 263 148 8 122 380 106 353 4.32e-48 167
Msa0269560 AT2G26100.2 37.712 236 135 6 122 354 106 332 3.26e-45 160

Find 101 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGCATATTTGTGTAAAAT+TGG 0.192644 2_3:+482202 None:intergenic
TATAAATGCCTTCTTCTTCT+TGG 0.218514 2_3:+484200 None:intergenic
TTTCTACTGCAGTTGGATTA+TGG 0.220482 2_3:-483081 Msa0269560:CDS
GAAGAAGAAGTTATAGATAT+TGG 0.242277 2_3:+485013 None:intergenic
AATCCATTTAGCAGAGATTT+TGG 0.243247 2_3:+484929 None:intergenic
GACGATGTTCATGTCAATTT+AGG 0.248599 2_3:-483031 Msa0269560:intron
AACATATACGTACTGGTTAA+TGG 0.250748 2_3:+482536 None:intergenic
TGCTAATAGAATATTTATTT+AGG 0.263995 2_3:-481584 Msa0269560:three_prime_UTR
TTCTACTGCAGTTGGATTAT+GGG 0.266499 2_3:-483080 Msa0269560:CDS
ATTATCACACCATTTGATTC+AGG 0.274906 2_3:+484679 None:intergenic
CTACCAAAATCTCTGCTAAA+TGG 0.289300 2_3:-484932 Msa0269560:CDS
CATTGAAACTTGCTTGTCTA+AGG 0.304646 2_3:+484305 None:intergenic
TCAAAGAATGAATTAGTCTA+TGG 0.327891 2_3:+485052 None:intergenic
GGAAGCACCTTCACTGGAAT+TGG 0.335761 2_3:+484221 None:intergenic
TCACTTGGTTCATGGTTCAT+TGG 0.354905 2_3:-482169 Msa0269560:CDS
AACAACCATGCTACCTTGGC+TGG 0.359668 2_3:+481410 None:intergenic
AAATACTTCCGACACGCAAC+CGG 0.363576 2_3:-482600 Msa0269560:CDS
AGTACCATGAACCTGAGTTT+TGG 0.369686 2_3:-482644 Msa0269560:CDS
AAGACGTTTCACTTGGTTCA+TGG 0.370236 2_3:-482177 Msa0269560:CDS
ATATGCAATCTCTAAGGATT+TGG 0.370357 2_3:-482571 Msa0269560:CDS
TTTGCGTTGCGTCGTTTGAT+TGG 0.371994 2_3:-481931 Msa0269560:CDS
TTCTCAAATCCGAAATGTTC+CGG 0.383366 2_3:+481746 None:intergenic
AACATCAGTTTGATCTGATT+CGG 0.385925 2_3:-481443 Msa0269560:three_prime_UTR
TTGTGATGAGCATGCCAATA+AGG 0.386549 2_3:+484883 None:intergenic
CTTCTTGGAAGCACCTTCAC+TGG 0.386928 2_3:+484215 None:intergenic
AGTTATAGATATTGGAACTT+TGG 0.389787 2_3:+485021 None:intergenic
TACATTGGGTGTATGAAATC+TGG 0.398028 2_3:-482834 Msa0269560:CDS
TTTGTTGCTCTTAGGTGTCT+TGG 0.401003 2_3:-482895 Msa0269560:intron
GCAGATATATGCAATCTCTA+AGG 0.418280 2_3:-482577 Msa0269560:CDS
AGGTGAACAACTTCTTCAAT+TGG 0.419854 2_3:-483914 Msa0269560:CDS
AATTCATTCATGTCATCCTT+AGG 0.423227 2_3:+484464 None:intergenic
ATTGTTATCAGATTCATGAT+TGG 0.426162 2_3:-483877 Msa0269560:CDS
AAGAAGGCATTTATAGTGAT+AGG 0.426783 2_3:-484192 Msa0269560:CDS
ACTTCCAAAACTCAGGTTCA+TGG 0.442847 2_3:+482640 None:intergenic
TTGTGAGTTAGATGAAGAAT+TGG 0.445177 2_3:+484988 None:intergenic
AAATTGCAGCCGGAACATTT+CGG 0.450970 2_3:-481755 Msa0269560:three_prime_UTR
GCAAGTTTCAATGCTGCAAA+TGG 0.451916 2_3:-484295 Msa0269560:CDS
ATCTTATAGCAACATGTTGA+AGG 0.454177 2_3:-483139 Msa0269560:intron
CTTCAATTGGAACGGGAGAA+AGG 0.459349 2_3:-483901 Msa0269560:CDS
TATAGATATTGGAACTTTGG+TGG 0.467701 2_3:+485024 None:intergenic
TCTCGCGAAAAGAACTCAAC+TGG 0.473406 2_3:-484252 Msa0269560:CDS
ACAACTTCTTCAATTGGAAC+GGG 0.474792 2_3:-483908 Msa0269560:CDS
GTGAAGGAGATGGAGCTGTT+TGG 0.475424 2_3:-481850 Msa0269560:CDS
TAAACACAGCTTTCAGTAGC+AGG 0.475599 2_3:-484167 Msa0269560:CDS
ATAGATATTGGAACTTTGGT+GGG 0.487001 2_3:+485025 None:intergenic
GATATGTATAATAGCTATAG+AGG 0.487997 2_3:-481607 Msa0269560:three_prime_UTR
ACTTACTTTCGAGATAAAAC+AGG 0.497626 2_3:+482810 None:intergenic
AGCACGATCTAGAATGCTGT+TGG 0.503006 2_3:+483289 None:intergenic
ATGTGCTGTGGAACCCCTCC+AGG 0.515746 2_3:-482115 Msa0269560:intron
GGGAAGCTTAGAGGCAAGGC+TGG 0.516191 2_3:-481682 Msa0269560:three_prime_UTR
GTGATTCAGTTAGAGAAACT+TGG 0.516772 2_3:-484137 Msa0269560:CDS
CAAAACCCAGGGTCTACATT+GGG 0.517449 2_3:-482848 Msa0269560:CDS
TCTCCAAACTTCCAAAACTC+AGG 0.522925 2_3:+482633 None:intergenic
AACAACTTCTTCAATTGGAA+CGG 0.527310 2_3:-483909 Msa0269560:CDS
CCCGTCATCGTTCAAAACCC+AGG 0.528161 2_3:-482860 Msa0269560:CDS
GCGAATGAAGACGTTTCACT+TGG 0.528259 2_3:-482184 Msa0269560:CDS
TATGCTTAACGAATAATACT+AGG 0.533520 2_3:-481342 Msa0269560:three_prime_UTR
TCAAAATGTGGTGAAGGAGA+TGG 0.536110 2_3:-481860 Msa0269560:CDS
TAGCAACAACCATGCTACCT+TGG 0.536229 2_3:+481406 None:intergenic
CTGGTTAATGGAAATGTAAG+TGG 0.540832 2_3:+482548 None:intergenic
AGCACCTTCACTGGAATTGG+TGG 0.541646 2_3:+484224 None:intergenic
CTACTTGTTTAAATTGCAGC+CGG 0.548236 2_3:-481765 Msa0269560:three_prime_UTR
TTGTGGGAAGCTTAGAGGCA+AGG 0.553054 2_3:-481686 Msa0269560:three_prime_UTR
TCAAAACCCAGGGTCTACAT+TGG 0.553999 2_3:-482849 Msa0269560:CDS
CATACACCCAATGTAGACCC+TGG 0.557481 2_3:+482842 None:intergenic
GGATTGTGATGTGACCAAAA+AGG 0.561138 2_3:-484611 Msa0269560:intron
ATACACCCAATGTAGACCCT+GGG 0.565448 2_3:+482843 None:intergenic
ACACAAAGACTTCCTTCGCC+TGG 0.566057 2_3:-483246 Msa0269560:intron
ACAGAAGCAGGAAAAGCCTA+AGG 0.573076 2_3:-484480 Msa0269560:intron
TCAGATTCATGATTGGCCAC+AGG 0.573731 2_3:-483870 Msa0269560:intron
TCGTTTGATTGGAGCTGCAG+TGG 0.574832 2_3:-481920 Msa0269560:CDS
TCGGCCACCAATTCCAGTGA+AGG 0.575721 2_3:-484228 Msa0269560:CDS
CTTCAAGTATATACCTGGAG+GGG 0.576115 2_3:+482102 None:intergenic
TGGGAGCAACCTGAATCAAA+TGG 0.578936 2_3:-484688 Msa0269560:CDS
AGATAAGAATTGCATGAATG+TGG 0.580067 2_3:-481652 Msa0269560:three_prime_UTR
AGAGATTGCATATATCTGCC+CGG 0.580156 2_3:+482581 None:intergenic
TTTAGATTTATATCCAAAGG+AGG 0.588798 2_3:-481817 Msa0269560:exon
TGTGAGTGGAAGGCACAGGC+AGG 0.591576 2_3:-481959 Msa0269560:CDS
TGATCTGCCTTACCAGGCGA+AGG 0.594114 2_3:+483234 None:intergenic
CAGTGGAATCTGCAAGTCAG+TGG 0.594378 2_3:-481903 Msa0269560:CDS
ATTGCCCAGCCAAGGTAGCA+TGG 0.594647 2_3:-481415 Msa0269560:three_prime_UTR
AATACTTCCGACACGCAACC+GGG 0.596160 2_3:-482599 Msa0269560:CDS
ACAACCATGCTACCTTGGCT+GGG 0.597036 2_3:+481411 None:intergenic
CGGACTCAATTGCCCAGCCA+AGG 0.599095 2_3:-481423 Msa0269560:three_prime_UTR
TTGGCATGCTCATCACAACT+AGG 0.601087 2_3:-484878 Msa0269560:intron
GCTTCAAGTATATACCTGGA+GGG 0.604128 2_3:+482101 None:intergenic
CCGTCATCGTTCAAAACCCA+GGG 0.605180 2_3:-482859 Msa0269560:CDS
AGGTGCTTCCAAGAAGAAGA+AGG 0.605321 2_3:-484208 Msa0269560:CDS
AGAGAAACTTGGATGCCTCA+AGG 0.605462 2_3:-484126 Msa0269560:intron
GATGAGCATGCCAATAAGGA+AGG 0.608946 2_3:+484887 None:intergenic
ATATCTGCCCGGTTGCGTGT+CGG 0.614366 2_3:+482592 None:intergenic
CGAAAAGAACTCAACTGGCT+CGG 0.614371 2_3:-484247 Msa0269560:CDS
TTGTGCAGACTGTGAGTGGA+AGG 0.630863 2_3:-481969 Msa0269560:intron
AGACTGTGAGTGGAAGGCAC+AGG 0.631807 2_3:-481963 Msa0269560:CDS
GTGCACTCAAAATGTGGTGA+AGG 0.632410 2_3:-481866 Msa0269560:CDS
AAATATGTGCACTCAAAATG+TGG 0.634913 2_3:-481872 Msa0269560:CDS
TAAGAATTGCATGAATGTGG+AGG 0.638200 2_3:-481649 Msa0269560:three_prime_UTR
AATGTTGTGCAGACTGTGAG+TGG 0.643243 2_3:-481973 Msa0269560:intron
GATGACCGCAGTATGTGCTG+TGG 0.707092 2_3:-482127 Msa0269560:CDS
AGAACTTCAAGTGATCTCTG+AGG 0.721031 2_3:-484632 Msa0269560:CDS
GGGTTCCACAGCACATACTG+CGG 0.739920 2_3:+482122 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTGATTTTTAATTTCT+TGG - chr2_3:482148-482167 Msa0269560:CDS 10.0%
!!! TAATCATCTTTAAATTTTTT+AGG + chr2_3:484427-484446 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTTGTAGC+AGG - chr2_3:481771-481790 Msa0269560:three_prime_UTR 15.0%
!! TAAGAAAGAATATTATATGT+CGG + chr2_3:484219-484238 None:intergenic 15.0%
!! AAAAATTACAAATTTCATTG+AGG - chr2_3:484241-484260 Msa0269560:CDS 15.0%
!!! TATTTTAGATTTATATCCAA+AGG - chr2_3:484665-484684 Msa0269560:CDS 15.0%
!! TGCTAATAGAATATTTATTT+AGG - chr2_3:484901-484920 Msa0269560:CDS 15.0%
!! TTGATGAAAAAACAAGAAAT+GGG + chr2_3:481647-481666 None:intergenic 20.0%
!! ATTGATGAAAAAACAAGAAA+TGG + chr2_3:481648-481667 None:intergenic 20.0%
!!! ATCTTATTTAAGACTCAATT+TGG - chr2_3:482389-482408 Msa0269560:intron 20.0%
!!! AGTTTTTATCCCTTTTTTTT+AGG - chr2_3:482481-482500 Msa0269560:intron 20.0%
!!! GTTTTTATCCCTTTTTTTTA+GGG - chr2_3:482482-482501 Msa0269560:intron 20.0%
!!! TTTTTATCCCTTTTTTTTAG+GGG - chr2_3:482483-482502 Msa0269560:intron 20.0%
!! TAATATAGTCTATATGATTC+TGG - chr2_3:482638-482657 Msa0269560:CDS 20.0%
!! CATTATACTCCTAATTTATT+CGG + chr2_3:482733-482752 None:intergenic 20.0%
!!! CAAAAAATATGTTCTTGTTT+TGG - chr2_3:482825-482844 Msa0269560:CDS 20.0%
!!! ATGTGTAAAACTAAGTATTT+TGG - chr2_3:482935-482954 Msa0269560:intron 20.0%
!! TTTATATGGATTCTACTTAA+TGG - chr2_3:483130-483149 Msa0269560:CDS 20.0%
!! TTTATTGTGTGAGAAAAATA+TGG - chr2_3:483287-483306 Msa0269560:CDS 20.0%
!! TGAGAAAAATATGGATAATT+TGG - chr2_3:483296-483315 Msa0269560:CDS 20.0%
!!! ATGAATTAGTCTATGGTTTT+TGG + chr2_3:481429-481448 None:intergenic 25.0%
!! TCAAAGAATGAATTAGTCTA+TGG + chr2_3:481436-481455 None:intergenic 25.0%
! AGTTATAGATATTGGAACTT+TGG + chr2_3:481467-481486 None:intergenic 25.0%
! GAAGAAGAAGTTATAGATAT+TGG + chr2_3:481475-481494 None:intergenic 25.0%
! AAGGAAAAAACAGAGAAAAT+TGG + chr2_3:481582-481601 None:intergenic 25.0%
!! TTGGTTTGAAATCAAAATCA+TGG - chr2_3:481696-481715 Msa0269560:three_prime_UTR 25.0%
!! TGGTTTGAAATCAAAATCAT+GGG - chr2_3:481697-481716 Msa0269560:three_prime_UTR 25.0%
! TGAACTTTATGATCTGATTT+AGG - chr2_3:481744-481763 Msa0269560:three_prime_UTR 25.0%
!!! GTGTGTTATTTTTGCTTTTT+TGG - chr2_3:481952-481971 Msa0269560:CDS 25.0%
! AAGAAACAAATCTAGCTAAA+AGG + chr2_3:482095-482114 None:intergenic 25.0%
!!! TTTTTAATTTCTTGGATTCC+AGG - chr2_3:482156-482175 Msa0269560:CDS 25.0%
!!! TTTTAATTTCTTGGATTCCA+GGG - chr2_3:482157-482176 Msa0269560:CDS 25.0%
!!! AATAAGATAGTTTTACCTTG+AGG + chr2_3:482377-482396 None:intergenic 25.0%
! TATGATATCCCTTTGATATT+GGG - chr2_3:482412-482431 Msa0269560:intron 25.0%
!! TTTTTCATCCCAATATCAAA+GGG + chr2_3:482423-482442 None:intergenic 25.0%
!! ATTTTTCATCCCAATATCAA+AGG + chr2_3:482424-482443 None:intergenic 25.0%
! ATATTGGGATGAAAAATTTG+AGG - chr2_3:482427-482446 Msa0269560:intron 25.0%
! AAAAAAGGGATAAAAACTCA+AGG + chr2_3:482479-482498 None:intergenic 25.0%
! ATTGTTATCAGATTCATGAT+TGG - chr2_3:482608-482627 Msa0269560:CDS 25.0%
! GAAACTACCAAAACAAAATT+TGG - chr2_3:482675-482694 Msa0269560:intron 25.0%
!!! AATCACACCAAATTTTGTTT+TGG + chr2_3:482685-482704 None:intergenic 25.0%
!!! AACAAAATTTGGTGTGATTT+AGG - chr2_3:482686-482705 Msa0269560:intron 25.0%
! TTAGGAGATAATAACAATGA+AGG - chr2_3:482704-482723 Msa0269560:intron 25.0%
!! TTTCAAAGTGACTTATGTTT+TGG + chr2_3:482908-482927 None:intergenic 25.0%
!!! GGTCACTTGATTATTTTTAT+TGG - chr2_3:482956-482975 Msa0269560:intron 25.0%
! GAAAAACAAAGAACTGTAAA+GGG + chr2_3:483071-483090 None:intergenic 25.0%
! AGAAAAACAAAGAACTGTAA+AGG + chr2_3:483072-483091 None:intergenic 25.0%
! ACATGATCTGTTCATTTATA+TGG - chr2_3:483116-483135 Msa0269560:CDS 25.0%
!!! TTTGGCTTAATTTTGACATT+TGG - chr2_3:483314-483333 Msa0269560:intron 25.0%
! TTTAGGTATATATCTGTCTT+AGG - chr2_3:483471-483490 Msa0269560:intron 25.0%
! TAAAGGTTTAAAAGAAACGA+TGG + chr2_3:483523-483542 None:intergenic 25.0%
!!! TTATTTTTTTGGGGGAAATA+GGG + chr2_3:483559-483578 None:intergenic 25.0%
! TTCGCATATTTGTGTAAAAT+TGG + chr2_3:484286-484305 None:intergenic 25.0%
! TTTAGATTTATATCCAAAGG+AGG - chr2_3:484668-484687 Msa0269560:CDS 25.0%
! AAAAAAAAATCATCCTCCTT+TGG + chr2_3:484684-484703 None:intergenic 25.0%
!!! TATAACATTGACCATTTTTG+TGG - chr2_3:484782-484801 Msa0269560:intron 25.0%
!!! ATAACATTGACCATTTTTGT+GGG - chr2_3:484783-484802 Msa0269560:intron 25.0%
! GATATGTATAATAGCTATAG+AGG - chr2_3:484878-484897 Msa0269560:intron 25.0%
! TATGCTTAACGAATAATACT+AGG - chr2_3:485143-485162 Msa0269560:five_prime_UTR 25.0%
ATAGATATTGGAACTTTGGT+GGG + chr2_3:481463-481482 None:intergenic 30.0%
TATAGATATTGGAACTTTGG+TGG + chr2_3:481464-481483 None:intergenic 30.0%
TTGTGAGTTAGATGAAGAAT+TGG + chr2_3:481500-481519 None:intergenic 30.0%
! AATCCATTTAGCAGAGATTT+TGG + chr2_3:481559-481578 None:intergenic 30.0%
!!! TCTGTTTTTTCCTTCCTTAT+TGG - chr2_3:481588-481607 Msa0269560:three_prime_UTR 30.0%
! TTTTGTGTTGTGAGTGATTT+TGG - chr2_3:481677-481696 Msa0269560:three_prime_UTR 30.0%
! GGTTTGAAATCAAAATCATG+GGG - chr2_3:481698-481717 Msa0269560:three_prime_UTR 30.0%
!!! TTTTTTTTTGTAGCAGGATG+TGG - chr2_3:481777-481796 Msa0269560:three_prime_UTR 30.0%
!!! TTTTTTTTGTAGCAGGATGT+GGG - chr2_3:481778-481797 Msa0269560:three_prime_UTR 30.0%
ATTATCACACCATTTGATTC+AGG + chr2_3:481809-481828 None:intergenic 30.0%
! TAATCAACCACATACCTTTT+TGG + chr2_3:481891-481910 None:intergenic 30.0%
GTTATTCCAAAAAAGTGGTA+GGG + chr2_3:481987-482006 None:intergenic 30.0%
TGTTATTCCAAAAAAGTGGT+AGG + chr2_3:481988-482007 None:intergenic 30.0%
CTTCTGTTATTCCAAAAAAG+TGG + chr2_3:481992-482011 None:intergenic 30.0%
!!! TTTTTTGGAATAACAGAAGC+AGG - chr2_3:481993-482012 Msa0269560:intron 30.0%
AATTCATTCATGTCATCCTT+AGG + chr2_3:482024-482043 None:intergenic 30.0%
CAAATCTAGCTAAAAGGAAA+TGG + chr2_3:482089-482108 None:intergenic 30.0%
TATAAATGCCTTCTTCTTCT+TGG + chr2_3:482288-482307 None:intergenic 30.0%
!! AAGAAGGCATTTATAGTGAT+AGG - chr2_3:482293-482312 Msa0269560:intron 30.0%
GTATGATATCCCTTTGATAT+TGG - chr2_3:482411-482430 Msa0269560:intron 30.0%
TCAAGGATTACTAACTATAC+AGG + chr2_3:482462-482481 None:intergenic 30.0%
TCAACAACCCCTAAAAAAAA+GGG + chr2_3:482493-482512 None:intergenic 30.0%
GTTGTTGAGTTTAACTATGA+TGG - chr2_3:482505-482524 Msa0269560:intron 30.0%
AACAACTTCTTCAATTGGAA+CGG - chr2_3:482576-482595 Msa0269560:CDS 30.0%
CATATAGACTATATTACCTG+TGG + chr2_3:482634-482653 None:intergenic 30.0%
GTAGGATGTTTCTTATTGTT+TGG - chr2_3:482760-482779 Msa0269560:intron 30.0%
ATCTTATAGCAACATGTTGA+AGG - chr2_3:483346-483365 Msa0269560:intron 30.0%
! ATTTTCTTTTCTACTGCAGT+TGG - chr2_3:483397-483416 Msa0269560:intron 30.0%
!!! GTTATTTTTTTGGGGGAAAT+AGG + chr2_3:483560-483579 None:intergenic 30.0%
!!! AAGAGCGGAGTTATTTTTTT+GGG + chr2_3:483569-483588 None:intergenic 30.0%
ACTTACTTTCGAGATAAAAC+AGG + chr2_3:483678-483697 None:intergenic 30.0%
!! ACGTTGTTTCTGCATTTATA+GGG - chr2_3:483812-483831 Msa0269560:intron 30.0%
! ATATGCAATCTCTAAGGATT+TGG - chr2_3:483914-483933 Msa0269560:CDS 30.0%
!! AACATATACGTACTGGTTAA+TGG + chr2_3:483952-483971 None:intergenic 30.0%
GTAAAGAAACATATACGTAC+TGG + chr2_3:483959-483978 None:intergenic 30.0%
TCTTTACACAGTCCTTAATT+TGG - chr2_3:483972-483991 Msa0269560:intron 30.0%
TTCCATTCAAAAATGATCCT+CGG + chr2_3:484001-484020 None:intergenic 30.0%
TTTGTCTATGTGATGAATGA+TGG - chr2_3:484042-484061 Msa0269560:intron 30.0%
ACAAGCTGAGATTTCATATT+TGG + chr2_3:484153-484172 None:intergenic 30.0%
AAATATGTGCACTCAAAATG+TGG - chr2_3:484613-484632 Msa0269560:CDS 30.0%
!!! AGGAGGATGATTTTTTTTTC+TGG - chr2_3:484685-484704 Msa0269560:CDS 30.0%
AGATAAGAATTGCATGAATG+TGG - chr2_3:484833-484852 Msa0269560:intron 30.0%
AACATCAGTTTGATCTGATT+CGG - chr2_3:485042-485061 Msa0269560:five_prime_UTR 30.0%
CTACCAAAATCTCTGCTAAA+TGG - chr2_3:481553-481572 Msa0269560:three_prime_UTR 35.0%
AAACAAGAAATGGGCAAGAA+GGG + chr2_3:481638-481657 None:intergenic 35.0%
AAAACAAGAAATGGGCAAGA+AGG + chr2_3:481639-481658 None:intergenic 35.0%
!!! AGTAAACCCTACCACTTTTT+TGG - chr2_3:481978-481997 Msa0269560:intron 35.0%
! CATTGAAACTTGCTTGTCTA+AGG + chr2_3:482183-482202 None:intergenic 35.0%
GTGATTCAGTTAGAGAAACT+TGG - chr2_3:482348-482367 Msa0269560:intron 35.0%
CTCAACAACCCCTAAAAAAA+AGG + chr2_3:482494-482513 None:intergenic 35.0%
TTGTTCACCTGATCAAAATC+GGG + chr2_3:482561-482580 None:intergenic 35.0%
GTTGTTCACCTGATCAAAAT+CGG + chr2_3:482562-482581 None:intergenic 35.0%
AGGTGAACAACTTCTTCAAT+TGG - chr2_3:482571-482590 Msa0269560:CDS 35.0%
ACAACTTCTTCAATTGGAAC+GGG - chr2_3:482577-482596 Msa0269560:CDS 35.0%
TGAAGGTGACCGAATAAATT+AGG - chr2_3:482721-482740 Msa0269560:intron 35.0%
TTCATAGTTCTCTGAGTTTG+AGG + chr2_3:483008-483027 None:intergenic 35.0%
ACTATGAATGCCTGCAAAAA+TGG - chr2_3:483020-483039 Msa0269560:intron 35.0%
CTTGTATGACCAATATCACT+TGG - chr2_3:483043-483062 Msa0269560:CDS 35.0%
TGAACAGATCATGTAGTGAT+TGG + chr2_3:483110-483129 None:intergenic 35.0%
AAGTTGCACTGAAACAACAA+TGG + chr2_3:483176-483195 None:intergenic 35.0%
TTTCTACTGCAGTTGGATTA+TGG - chr2_3:483404-483423 Msa0269560:intron 35.0%
TTCTACTGCAGTTGGATTAT+GGG - chr2_3:483405-483424 Msa0269560:intron 35.0%
GACGATGTTCATGTCAATTT+AGG - chr2_3:483454-483473 Msa0269560:intron 35.0%
!!! AGAGCGGAGTTATTTTTTTG+GGG + chr2_3:483568-483587 None:intergenic 35.0%
!!! GAAGAGCGGAGTTATTTTTT+TGG + chr2_3:483570-483589 None:intergenic 35.0%
TACATTGGGTGTATGAAATC+TGG - chr2_3:483651-483670 Msa0269560:intron 35.0%
TATCTCGAAAGTAAGTACAC+TGG - chr2_3:483682-483701 Msa0269560:intron 35.0%
AAAGTAAGTACACTGGATTC+TGG - chr2_3:483689-483708 Msa0269560:intron 35.0%
ACACTGGATTCTGGATTATT+TGG - chr2_3:483698-483717 Msa0269560:intron 35.0%
!!! TTATTTTTGTCTGAACCCTC+CGG + chr2_3:483742-483761 None:intergenic 35.0%
ATAAGCATTAAGCCACAATC+AGG + chr2_3:483783-483802 None:intergenic 35.0%
TGCAGAAACAACGTCAAAAA+TGG + chr2_3:483806-483825 None:intergenic 35.0%
!! GACGTTGTTTCTGCATTTAT+AGG - chr2_3:483811-483830 Msa0269560:intron 35.0%
!! TTTTGGAAGTTTGGAGAAGA+GGG - chr2_3:483858-483877 Msa0269560:intron 35.0%
GCAGATATATGCAATCTCTA+AGG - chr2_3:483908-483927 Msa0269560:CDS 35.0%
CTGGTTAATGGAAATGTAAG+TGG + chr2_3:483940-483959 None:intergenic 35.0%
!! AACCGAGGATCATTTTTGAA+TGG - chr2_3:483996-484015 Msa0269560:intron 35.0%
TTGCTTCCAATAAAATCTGC+AGG + chr2_3:484069-484088 None:intergenic 35.0%
!! TCTTGCTGGTTCTATTATCA+AGG + chr2_3:484184-484203 None:intergenic 35.0%
GGATACATAAAGATTCTTGC+TGG + chr2_3:484198-484217 None:intergenic 35.0%
GATTGCTTCAAGTATATACC+TGG + chr2_3:484391-484410 None:intergenic 35.0%
CTACTTGTTTAAATTGCAGC+CGG - chr2_3:484720-484739 Msa0269560:intron 35.0%
TTCTCAAATCCGAAATGTTC+CGG + chr2_3:484742-484761 None:intergenic 35.0%
TAAGAATTGCATGAATGTGG+AGG - chr2_3:484836-484855 Msa0269560:intron 35.0%
!! AATGTGGAGGATTTTAGCAT+GGG - chr2_3:484849-484868 Msa0269560:intron 35.0%
TTGTGATGAGCATGCCAATA+AGG + chr2_3:481605-481624 None:intergenic 40.0%
AGAACTTCAAGTGATCTCTG+AGG - chr2_3:481853-481872 Msa0269560:CDS 40.0%
GGATTGTGATGTGACCAAAA+AGG - chr2_3:481874-481893 Msa0269560:CDS 40.0%
! GATGTGACCAAAAAGGTATG+TGG - chr2_3:481881-481900 Msa0269560:CDS 40.0%
GCAAGTTTCAATGCTGCAAA+TGG - chr2_3:482190-482209 Msa0269560:CDS 40.0%
TAAACACAGCTTTCAGTAGC+AGG - chr2_3:482318-482337 Msa0269560:intron 40.0%
TGTTCACCTGATCAAAATCG+GGG + chr2_3:482560-482579 None:intergenic 40.0%
!!! GTCATACAAGCCATTTTTGC+AGG + chr2_3:483033-483052 None:intergenic 40.0%
TAAAGGGAGCCAAGTGATAT+TGG + chr2_3:483055-483074 None:intergenic 40.0%
GAATAATGATCTGCCTTACC+AGG + chr2_3:483260-483279 None:intergenic 40.0%
!!! GAGCGGAGTTATTTTTTTGG+GGG + chr2_3:483567-483586 None:intergenic 40.0%
CTAAGAGCAACAAAGAAGAG+CGG + chr2_3:483584-483603 None:intergenic 40.0%
TTTGTTGCTCTTAGGTGTCT+TGG - chr2_3:483590-483609 Msa0269560:intron 40.0%
CTGGATTCTGGATTATTTGG+AGG - chr2_3:483701-483720 Msa0269560:intron 40.0%
! AGTACCATGAACCTGAGTTT+TGG - chr2_3:483841-483860 Msa0269560:intron 40.0%
ACTTCCAAAACTCAGGTTCA+TGG + chr2_3:483848-483867 None:intergenic 40.0%
!!! GAACCTGAGTTTTGGAAGTT+TGG - chr2_3:483849-483868 Msa0269560:intron 40.0%
TCTCCAAACTTCCAAAACTC+AGG + chr2_3:483855-483874 None:intergenic 40.0%
!!! GTTTTGGAAGTTTGGAGAAG+AGG - chr2_3:483857-483876 Msa0269560:intron 40.0%
AGAGATTGCATATATCTGCC+CGG + chr2_3:483907-483926 None:intergenic 40.0%
! GATGGTCCTGCAGATTTTAT+TGG - chr2_3:484060-484079 Msa0269560:intron 40.0%
! ATTGGCCTGCAATCATAATG+AGG + chr2_3:484268-484287 None:intergenic 40.0%
AAGACGTTTCACTTGGTTCA+TGG - chr2_3:484308-484327 Msa0269560:CDS 40.0%
TCACTTGGTTCATGGTTCAT+TGG - chr2_3:484316-484335 Msa0269560:intron 40.0%
CTTCAAGTATATACCTGGAG+GGG + chr2_3:484386-484405 None:intergenic 40.0%
GCTTCAAGTATATACCTGGA+GGG + chr2_3:484387-484406 None:intergenic 40.0%
TGCTTCAAGTATATACCTGG+AGG + chr2_3:484388-484407 None:intergenic 40.0%
TCAAAATGTGGTGAAGGAGA+TGG - chr2_3:484625-484644 Msa0269560:CDS 40.0%
AAATTGCAGCCGGAACATTT+CGG - chr2_3:484730-484749 Msa0269560:intron 40.0%
CTCTAAGCTTCCCACAAAAA+TGG + chr2_3:484796-484815 None:intergenic 40.0%
! CATTTTTGTGGGAAGCTTAG+AGG - chr2_3:484794-484813 Msa0269560:intron 40.0%
!! GAATGTGGAGGATTTTAGCA+TGG - chr2_3:484848-484867 Msa0269560:intron 40.0%
!! ATGTGGAGGATTTTAGCATG+GGG - chr2_3:484850-484869 Msa0269560:intron 40.0%
GATGAGCATGCCAATAAGGA+AGG + chr2_3:481601-481620 None:intergenic 45.0%
TTGGCATGCTCATCACAACT+AGG - chr2_3:481607-481626 Msa0269560:three_prime_UTR 45.0%
TGGGAGCAACCTGAATCAAA+TGG - chr2_3:481797-481816 Msa0269560:three_prime_UTR 45.0%
ACAGAAGCAGGAAAAGCCTA+AGG - chr2_3:482005-482024 Msa0269560:intron 45.0%
TCTCGCGAAAAGAACTCAAC+TGG - chr2_3:482233-482252 Msa0269560:intron 45.0%
CGAAAAGAACTCAACTGGCT+CGG - chr2_3:482238-482257 Msa0269560:intron 45.0%
AGGTGCTTCCAAGAAGAAGA+AGG - chr2_3:482277-482296 Msa0269560:intron 45.0%
AGAGAAACTTGGATGCCTCA+AGG - chr2_3:482359-482378 Msa0269560:intron 45.0%
!! TTTGTCCCCCGATTTTGATC+AGG - chr2_3:482551-482570 Msa0269560:CDS 45.0%
GTTCACCTGATCAAAATCGG+GGG + chr2_3:482559-482578 None:intergenic 45.0%
CTTCAATTGGAACGGGAGAA+AGG - chr2_3:482584-482603 Msa0269560:CDS 45.0%
! TCAGATTCATGATTGGCCAC+AGG - chr2_3:482615-482634 Msa0269560:CDS 45.0%
GGAGTATAATGCGAAGCTGT+AGG - chr2_3:482742-482761 Msa0269560:intron 45.0%
! AGCACGATCTAGAATGCTGT+TGG + chr2_3:483199-483218 None:intergenic 45.0%
AGGGCAGAGATAAGTGGTAA+AGG + chr2_3:483540-483559 None:intergenic 45.0%
GGAAATAGGGCAGAGATAAG+TGG + chr2_3:483546-483565 None:intergenic 45.0%
CGCTCTTCTTTGTTGCTCTT+AGG - chr2_3:483582-483601 Msa0269560:intron 45.0%
!!! TTTTGAACGATGACGGGCAA+GGG + chr2_3:483622-483641 None:intergenic 45.0%
TCAAAACCCAGGGTCTACAT+TGG - chr2_3:483636-483655 Msa0269560:intron 45.0%
CAAAACCCAGGGTCTACATT+GGG - chr2_3:483637-483656 Msa0269560:intron 45.0%
ATACACCCAATGTAGACCCT+GGG + chr2_3:483645-483664 None:intergenic 45.0%
TTAAGCCACAATCAGGAGCA+TGG + chr2_3:483776-483795 None:intergenic 45.0%
AAATACTTCCGACACGCAAC+CGG - chr2_3:483885-483904 Msa0269560:CDS 45.0%
! AGTCCTTAATTTGGCAACCG+AGG - chr2_3:483981-484000 Msa0269560:intron 45.0%
GATCCTCGGTTGCCAAATTA+AGG + chr2_3:483987-484006 None:intergenic 45.0%
GAGGTCCTCATTATGATTGC+AGG - chr2_3:484260-484279 Msa0269560:CDS 45.0%
GCGAATGAAGACGTTTCACT+TGG - chr2_3:484301-484320 Msa0269560:CDS 45.0%
AATGTTGTGCAGACTGTGAG+TGG - chr2_3:484512-484531 Msa0269560:intron 45.0%
TTTGCGTTGCGTCGTTTGAT+TGG - chr2_3:484554-484573 Msa0269560:intron 45.0%
GTGCACTCAAAATGTGGTGA+AGG - chr2_3:484619-484638 Msa0269560:CDS 45.0%
TAGCAACAACCATGCTACCT+TGG + chr2_3:485082-485101 None:intergenic 45.0%
!!! ATAATTTTCTTATATAAAAA+CGG - chr2_3:481367-481386 Msa0269560:three_prime_UTR 5.0%
! AACTTGCTTGTCTAAGGCCC+TGG + chr2_3:482177-482196 None:intergenic 50.0%
AGCACCTTCACTGGAATTGG+TGG + chr2_3:482264-482283 None:intergenic 50.0%
!! GGAAGCACCTTCACTGGAAT+TGG + chr2_3:482267-482286 None:intergenic 50.0%
!! CTTCTTGGAAGCACCTTCAC+TGG + chr2_3:482273-482292 None:intergenic 50.0%
ACACAAAGACTTCCTTCGCC+TGG - chr2_3:483239-483258 Msa0269560:intron 50.0%
AAGACTTCCTTCGCCTGGTA+AGG - chr2_3:483244-483263 Msa0269560:intron 50.0%
!!! GTTTTGAACGATGACGGGCA+AGG + chr2_3:483623-483642 None:intergenic 50.0%
!!! CCTGGGTTTTGAACGATGAC+GGG + chr2_3:483628-483647 None:intergenic 50.0%
!!! CCCTGGGTTTTGAACGATGA+CGG + chr2_3:483629-483648 None:intergenic 50.0%
CCGTCATCGTTCAAAACCCA+GGG - chr2_3:483626-483645 Msa0269560:intron 50.0%
CATACACCCAATGTAGACCC+TGG + chr2_3:483646-483665 None:intergenic 50.0%
CTCTTCCATGCTCCTGATTG+TGG - chr2_3:483768-483787 Msa0269560:intron 50.0%
AATACTTCCGACACGCAACC+GGG - chr2_3:483886-483905 Msa0269560:CDS 50.0%
TTGTGCAGACTGTGAGTGGA+AGG - chr2_3:484516-484535 Msa0269560:intron 50.0%
TCGTTTGATTGGAGCTGCAG+TGG - chr2_3:484565-484584 Msa0269560:intron 50.0%
CAGTGGAATCTGCAAGTCAG+TGG - chr2_3:484582-484601 Msa0269560:intron 50.0%
GTGAAGGAGATGGAGCTGTT+TGG - chr2_3:484635-484654 Msa0269560:CDS 50.0%
TTGTGGGAAGCTTAGAGGCA+AGG - chr2_3:484799-484818 Msa0269560:intron 50.0%
!! TGGAGGATTTTAGCATGGGG+TGG - chr2_3:484853-484872 Msa0269560:intron 50.0%
!! GGAGGATTTTAGCATGGGGT+GGG - chr2_3:484854-484873 Msa0269560:intron 50.0%
!! GAGGATTTTAGCATGGGGTG+GGG - chr2_3:484855-484874 Msa0269560:intron 50.0%
!! AGGATTTTAGCATGGGGTGG+GGG - chr2_3:484856-484875 Msa0269560:intron 50.0%
ACAACCATGCTACCTTGGCT+GGG + chr2_3:485077-485096 None:intergenic 50.0%
AACAACCATGCTACCTTGGC+TGG + chr2_3:485078-485097 None:intergenic 50.0%
TCGGCCACCAATTCCAGTGA+AGG - chr2_3:482257-482276 Msa0269560:intron 55.0%
TGATCTGCCTTACCAGGCGA+AGG + chr2_3:483254-483273 None:intergenic 55.0%
CCCGTCATCGTTCAAAACCC+AGG - chr2_3:483625-483644 Msa0269560:intron 55.0%
TCTGAACCCTCCGGCTTCTA+GGG + chr2_3:483733-483752 None:intergenic 55.0%
ATATCTGCCCGGTTGCGTGT+CGG + chr2_3:483896-483915 None:intergenic 55.0%
GATGACCGCAGTATGTGCTG+TGG - chr2_3:484358-484377 Msa0269560:intron 55.0%
GGGTTCCACAGCACATACTG+CGG + chr2_3:484366-484385 None:intergenic 55.0%
! AGACTGTGAGTGGAAGGCAC+AGG - chr2_3:484522-484541 Msa0269560:intron 55.0%
ATTGCCCAGCCAAGGTAGCA+TGG - chr2_3:485070-485089 Msa0269560:five_prime_UTR 55.0%
GAGGCCTTTCCCCTAGAAGC+CGG - chr2_3:483720-483739 Msa0269560:intron 60.0%
CCTTTCCCCTAGAAGCCGGA+GGG - chr2_3:483724-483743 Msa0269560:intron 60.0%
CTGAACCCTCCGGCTTCTAG+GGG + chr2_3:483732-483751 None:intergenic 60.0%
GTCTGAACCCTCCGGCTTCT+AGG + chr2_3:483734-483753 None:intergenic 60.0%
ATGTGCTGTGGAACCCCTCC+AGG - chr2_3:484370-484389 Msa0269560:intron 60.0%
! TGTGAGTGGAAGGCACAGGC+AGG - chr2_3:484526-484545 Msa0269560:intron 60.0%
GGGAAGCTTAGAGGCAAGGC+TGG - chr2_3:484803-484822 Msa0269560:intron 60.0%
CGGACTCAATTGCCCAGCCA+AGG - chr2_3:485062-485081 Msa0269560:five_prime_UTR 60.0%
GCCTTTCCCCTAGAAGCCGG+AGG - chr2_3:483723-483742 Msa0269560:intron 65.0%
! CCCTCCGGCTTCTAGGGGAA+AGG + chr2_3:483727-483746 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 481321 485186 481321 ID=Msa0269560;Name=Msa0269560
chr2_3 mRNA 481321 485186 481321 ID=Msa0269560-mRNA-1;Parent=Msa0269560;Name=Msa0269560-mRNA-1;_AED=0.09;_eAED=0.09;_QI=216|1|1|1|1|1|11|514|395
chr2_3 exon 481321 481983 481321 ID=Msa0269560-mRNA-1:exon:214;Parent=Msa0269560-mRNA-1
chr2_3 exon 482116 482225 482116 ID=Msa0269560-mRNA-1:exon:213;Parent=Msa0269560-mRNA-1
chr2_3 exon 482549 482674 482549 ID=Msa0269560-mRNA-1:exon:212;Parent=Msa0269560-mRNA-1
chr2_3 exon 482816 482903 482816 ID=Msa0269560-mRNA-1:exon:211;Parent=Msa0269560-mRNA-1
chr2_3 exon 483032 483152 483032 ID=Msa0269560-mRNA-1:exon:210;Parent=Msa0269560-mRNA-1
chr2_3 exon 483247 483319 483247 ID=Msa0269560-mRNA-1:exon:209;Parent=Msa0269560-mRNA-1
chr2_3 exon 483871 483934 483871 ID=Msa0269560-mRNA-1:exon:208;Parent=Msa0269560-mRNA-1
chr2_3 exon 484127 484329 484127 ID=Msa0269560-mRNA-1:exon:207;Parent=Msa0269560-mRNA-1
chr2_3 exon 484440 484498 484440 ID=Msa0269560-mRNA-1:exon:206;Parent=Msa0269560-mRNA-1
chr2_3 exon 484612 484714 484612 ID=Msa0269560-mRNA-1:exon:205;Parent=Msa0269560-mRNA-1
chr2_3 exon 484879 485186 484879 ID=Msa0269560-mRNA-1:exon:204;Parent=Msa0269560-mRNA-1
chr2_3 five_prime_UTR 484971 485186 484971 ID=Msa0269560-mRNA-1:five_prime_utr;Parent=Msa0269560-mRNA-1
chr2_3 CDS 484879 484970 484879 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 484612 484714 484612 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 484440 484498 484440 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 484127 484329 484127 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 483871 483934 483871 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 483247 483319 483247 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 483032 483152 483032 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 482816 482903 482816 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 482549 482674 482549 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 482116 482225 482116 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 CDS 481835 481983 481835 ID=Msa0269560-mRNA-1:cds;Parent=Msa0269560-mRNA-1
chr2_3 three_prime_UTR 481321 481834 481321 ID=Msa0269560-mRNA-1:three_prime_utr;Parent=Msa0269560-mRNA-1
Gene Sequence

>Msa0269560

ATGAAGACTCGTACTTCTACCAAAATCTCTGCTAAATGGATTCCAATTTTCTCTGTTTTTTCCTTCCTTATTGGCATGCTCATCACAACTAGGATGTGGGAGCAACCTGAATCAAATGGTGTGATAATTTCTAAGCATCAACGTGATCAACAAGAACTTCAAGTGATCTCTGAGGATTGTGATGTGACCAAAAAGAAGCAGGAAAAGCCTAAGGATGACATGAATGAATTGTATAAAACACATGAAGCTATTCAGGCCTTAGACAAGCAAGTTTCAATGCTGCAAATGGAATTAGCAGCAGCTAGAAGTTCTCGCGAAAAGAACTCAACTGGCTCGGCCACCAATTCCAGTGAAGGTGCTTCCAAGAAGAAGAAGGCATTTATAGTGATAGGTATAAACACAGCTTTCAGTAGCAGGAAGAGACGTGATTCAGTTAGAGAAACTTGGATGCCTCAAGGTGAACAACTTCTTCAATTGGAACGGGAGAAAGGAATTGTTATCAGATTCATGATTGGCCACAGTGCAACTTCCAACAGCATTCTAGATCGTGCTATTGATTCAGAAGAAGCTCAACACAAAGACTTCCTTCGCCTGCAACATGTTGAAGGATATCATGAGCTGTCTGCAAAGACAAAGATTTTCTTTTCTACTGCAGTTGGATTATGGGATGCTGATTTCTATGTCAAAGTAGATGACGATGTTCATGTCAATTTAGGTGTCTTGGCAGCAACCCTTGCCCGTCATCGTTCAAAACCCAGGGTCTACATTGGGTGTATGAAATCTGGACCTGTTTTATCTCGAAAGGATGTCAAGTACCATGAACCTGAGTTTTGGAAGTTTGGAGAAGAGGGAAACAAATACTTCCGACACGCAACCGGGCAGATATATGCAATCTCTAAGGATTTGGCCACTTACATTTCCATTAACCAGCCAATTTTACACAAATATGCGAATGAAGACGTTTCACTTGGTTCATGGTTCATTGGTCTTGAAGTTGAGCACATTGATGACCGCAGTATGTGCTGTGGAACCCCTCCAGACTGTGAGTGGAAGGCACAGGCAGGTAACATTTGCGTTGCGTCGTTTGATTGGAGCTGCAGTGGAATCTGCAAGTCAGTGGAGAAGATTAAATATGTGCACTCAAAATGTGGTGAAGGAGATGGAGCTGTTTGGAGTGCTTTATTTTAG

Protein sequence

>Msa0269560

MKTRTSTKISAKWIPIFSVFSFLIGMLITTRMWEQPESNGVIISKHQRDQQELQVISEDCDVTKKKQEKPKDDMNELYKTHEAIQALDKQVSMLQMELAAARSSREKNSTGSATNSSEGASKKKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGHSATSNSILDRAIDSEEAQHKDFLRLQHVEGYHELSAKTKIFFSTAVGLWDADFYVKVDDDVHVNLGVLAATLARHRSKPRVYIGCMKSGPVLSRKDVKYHEPEFWKFGEEGNKYFRHATGQIYAISKDLATYISINQPILHKYANEDVSLGSWFIGLEVEHIDDRSMCCGTPPDCEWKAQAGNICVASFDWSCSGICKSVEKIKYVHSKCGEGDGAVWSALF*