AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1254080

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254080 MtrunA17_Chr8g0370941 72.088 498 76 7 1 437 1 496 0.0 682
Msa1254080 MtrunA17_Chr5g0403641 38.608 474 200 12 11 427 61 500 1.42e-87 276
Msa1254080 MtrunA17_Chr7g0275511 34.519 478 241 14 5 426 11 472 1.25e-80 257
Msa1254080 MtrunA17_Chr8g0347271 34.968 469 235 12 10 426 20 470 6.48e-78 249
Msa1254080 MtrunA17_Chr8g0347281 35.181 469 234 12 10 426 19 469 8.69e-78 249
Msa1254080 MtrunA17_Chr7g0232391 35.197 483 226 13 7 426 4 462 1.94e-77 248
Msa1254080 MtrunA17_Chr7g0232401 32.083 480 247 13 7 426 4 464 1.32e-71 233
Msa1254080 MtrunA17_Chr7g0232331 32.225 481 254 14 7 431 4 468 8.55e-71 231
Msa1254080 MtrunA17_Chr7g0232341 32.917 480 238 15 9 426 6 463 1.21e-70 231
Msa1254080 MtrunA17_Chr7g0232411 32.438 484 238 14 7 426 4 462 9.68e-70 228
Msa1254080 MtrunA17_Chr8g0336691 33.038 451 252 13 7 426 478 909 1.76e-69 239
Msa1254080 MtrunA17_Chr8g0336691 31.942 479 248 12 7 426 917 1376 4.81e-68 235
Msa1254080 MtrunA17_Chr8g0336691 28.870 478 274 11 2 426 6 470 3.29e-60 212
Msa1254080 MtrunA17_Chr8g0373301 31.590 478 260 14 1 426 1 463 2.49e-69 227
Msa1254080 MtrunA17_Chr8g0334861 32.409 469 252 13 8 425 5 459 3.01e-68 224
Msa1254080 MtrunA17_Chr6g0449931 32.298 483 246 15 5 426 2 464 1.19e-65 218
Msa1254080 MtrunA17_Chr6g0486251 33.192 473 242 16 10 426 7 461 1.96e-65 217
Msa1254080 MtrunA17_Chr6g0486201 33.192 473 242 16 10 426 7 461 1.96e-65 217
Msa1254080 MtrunA17_Chr6g0459311 32.158 482 253 16 10 436 14 476 5.68e-65 216
Msa1254080 MtrunA17_Chr8g0336741 32.035 462 248 12 17 426 21 468 2.82e-64 214
Msa1254080 MtrunA17_Chr8g0334851 30.064 469 269 10 9 426 6 466 3.43e-64 214
Msa1254080 MtrunA17_Chr1g0153451 29.810 473 267 11 5 426 2 460 9.47e-64 213
Msa1254080 MtrunA17_Chr8g0336651 31.106 479 254 14 7 426 779 1240 1.12e-62 219
Msa1254080 MtrunA17_Chr8g0336651 31.290 473 261 12 5 426 2 461 2.31e-60 213
Msa1254080 MtrunA17_Chr8g0336651 31.907 257 133 8 193 425 532 770 2.43e-29 121
Msa1254080 MtrunA17_Chr8g0335141 32.143 476 244 18 10 426 10 465 3.68e-62 208
Msa1254080 MtrunA17_Chr8g0336731 31.965 463 249 12 16 425 37 486 5.56e-62 208
Msa1254080 MtrunA17_Chr8g0335161 31.303 476 249 18 10 426 7 463 1.65e-61 206
Msa1254080 MtrunA17_Chr7g0232311 30.608 477 258 14 9 430 6 464 5.23e-60 202
Msa1254080 MtrunA17_Chr8g0339451 31.808 437 217 13 62 430 42 465 7.71e-59 199
Msa1254080 MtrunA17_Chr8g0361371 29.106 481 266 16 1 423 1 464 5.37e-58 197
Msa1254080 MtrunA17_Chr8g0339461 34.140 372 181 9 111 429 111 471 1.23e-57 196
Msa1254080 MtrunA17_Chr8g0339631 30.992 484 242 17 7 423 4 462 1.64e-56 193
Msa1254080 MtrunA17_Chr8g0334831 29.106 481 259 15 10 423 7 472 6.74e-56 192
Msa1254080 MtrunA17_Chr6g0462521 30.252 476 244 15 10 428 5 449 1.12e-55 191
Msa1254080 MtrunA17_Chr6g0462531 30.977 481 248 16 10 428 5 463 1.56e-55 191
Msa1254080 MtrunA17_Chr6g0462551 30.238 463 257 14 9 418 4 453 6.74e-54 187
Msa1254080 MtrunA17_Chr3g0079731 31.515 495 251 17 7 430 4 481 1.09e-53 186
Msa1254080 MtrunA17_Chr5g0448521 28.778 483 263 15 10 430 6 469 7.02e-53 184
Msa1254080 MtrunA17_Chr7g0232351 33.503 394 181 11 7 338 4 378 1.84e-52 180
Msa1254080 MtrunA17_Chr6g0462571 30.538 465 248 14 10 418 5 450 3.36e-52 182
Msa1254080 MtrunA17_Chr6g0462541 31.466 464 247 14 10 418 5 452 4.26e-52 182
Msa1254080 MtrunA17_Chr5g0429681 28.361 476 267 14 8 430 43 497 4.37e-52 182
Msa1254080 MtrunA17_Chr8g0339441 32.517 449 240 16 7 422 4 422 1.40e-50 177
Msa1254080 MtrunA17_Chr5g0429711 28.992 476 273 14 1 430 3 459 1.22e-48 172
Msa1254080 MtrunA17_Chr5g0442541 27.443 481 270 16 8 430 4 463 1.60e-48 172
Msa1254080 MtrunA17_Chr8g0339601 31.420 331 163 8 145 422 4 323 7.57e-47 164
Msa1254080 MtrunA17_Chr5g0442601 28.370 497 273 16 3 432 398 878 2.77e-46 171
Msa1254080 MtrunA17_Chr5g0442601 29.137 278 163 7 111 361 63 333 1.10e-21 98.2
Msa1254080 MtrunA17_Chr5g0442511 28.252 492 253 17 3 432 43 496 5.26e-46 166
Msa1254080 MtrunA17_Chr5g0442521 28.024 496 267 19 8 436 4 476 2.54e-45 164
Msa1254080 MtrunA17_Chr5g0442561 27.812 489 272 16 8 432 4 475 3.60e-45 163
Msa1254080 MtrunA17_Chr5g0442581 28.776 490 264 15 8 429 4 476 3.17e-44 162
Msa1254080 MtrunA17_Chr2g0302961 26.694 487 275 13 6 431 2 467 4.42e-40 149
Msa1254080 MtrunA17_Chr2g0302991 29.615 493 250 20 6 431 2 464 1.07e-39 148
Msa1254080 MtrunA17_Chr5g0442491 27.143 490 276 17 8 432 4 477 2.48e-39 147
Msa1254080 MtrunA17_Chr5g0440421 26.640 503 248 19 19 429 20 493 8.38e-38 143
Msa1254080 MtrunA17_Chr4g0042931 28.302 477 262 17 9 427 7 461 5.22e-36 138
Msa1254080 MtrunA17_Chr4g0044511 25.667 487 282 16 1 425 32 500 6.63e-35 135
Msa1254080 MtrunA17_Chr4g0014061 27.347 490 265 21 1 423 1 466 1.46e-34 134
Msa1254080 MtrunA17_Chr4g0066281 25.745 470 265 18 12 422 15 459 4.29e-34 132
Msa1254080 MtrunA17_Chr4g0066201 25.562 489 277 17 1 423 1 468 4.70e-34 133
Msa1254080 MtrunA17_Chr1g0153461 38.415 164 94 3 263 426 53 209 9.53e-33 123
Msa1254080 MtrunA17_Chr3g0079711 42.857 154 80 4 278 430 43 189 1.40e-32 122
Msa1254080 MtrunA17_Chr3g0078841 26.389 504 264 23 1 427 2 475 2.29e-32 128
Msa1254080 MtrunA17_Chr7g0243951 26.087 483 271 21 9 422 11 476 2.70e-32 128
Msa1254080 MtrunA17_Chr7g0243871 27.479 484 270 23 1 422 1 465 5.97e-32 127
Msa1254080 MtrunA17_Chr7g0243781 26.369 493 267 21 1 422 1 468 1.52e-31 125
Msa1254080 MtrunA17_Chr7g0243771 27.515 487 256 24 9 422 6 468 2.72e-31 125
Msa1254080 MtrunA17_Chr6g0454341 26.884 491 262 20 9 427 10 475 5.45e-31 124
Msa1254080 MtrunA17_Chr7g0243801 27.835 485 257 25 9 422 7 469 6.47e-31 124
Msa1254080 MtrunA17_Chr4g0044521 25.311 482 277 17 1 422 1 459 1.43e-30 122
Msa1254080 MtrunA17_Chr4g0011051 24.691 486 276 17 9 420 9 478 1.48e-30 123
Msa1254080 MtrunA17_Chr8g0361411 26.695 472 259 15 16 431 15 455 2.18e-30 122
Msa1254080 MtrunA17_Chr4g0066151 25.161 465 273 16 19 425 28 475 3.24e-30 122
Msa1254080 MtrunA17_Chr4g0066171 24.783 460 271 16 19 423 31 470 3.96e-30 122
Msa1254080 MtrunA17_Chr4g0042891 27.115 461 268 18 9 416 7 452 6.21e-30 121
Msa1254080 MtrunA17_Chr5g0419761 25.826 484 276 17 19 432 19 489 9.74e-30 120
Msa1254080 MtrunA17_Chr7g0243861 26.971 482 269 20 9 422 14 480 2.14e-29 120
Msa1254080 MtrunA17_Chr7g0265051 40.588 170 88 6 272 433 324 488 3.11e-29 119
Msa1254080 MtrunA17_Chr7g0243931 39.355 155 81 3 277 422 333 483 3.19e-29 119
Msa1254080 MtrunA17_Chr4g0066261 24.359 468 276 16 19 422 21 474 4.19e-29 119
Msa1254080 MtrunA17_Chr6g0482061 26.681 476 265 17 8 417 10 467 5.24e-29 118
Msa1254080 MtrunA17_Chr4g0066221 35.669 157 92 2 273 422 319 473 6.16e-29 118
Msa1254080 MtrunA17_Chr7g0275681 25.160 469 263 17 19 419 22 470 6.55e-29 118
Msa1254080 MtrunA17_Chr7g0265101 23.379 509 295 15 1 433 1 490 7.01e-29 118
Msa1254080 MtrunA17_Chr8g0336331 26.434 488 269 22 8 427 9 474 1.26e-28 117
Msa1254080 MtrunA17_Chr6g0454351 26.261 476 269 20 9 427 12 462 1.58e-28 117
Msa1254080 MtrunA17_Chr6g0463851 38.095 147 82 3 283 422 331 475 2.40e-28 117
Msa1254080 MtrunA17_Chr7g0243681 26.151 478 273 20 9 422 11 472 2.62e-28 116
Msa1254080 MtrunA17_Chr7g0265141 25.904 498 265 20 1 418 1 474 3.49e-28 116
Msa1254080 MtrunA17_Chr7g0243631 37.662 154 86 2 277 422 328 479 6.09e-28 115
Msa1254080 MtrunA17_Chr4g0066131 34.615 156 93 2 283 431 323 476 7.31e-28 115
Msa1254080 MtrunA17_Chr4g0060511 40.816 147 74 3 285 422 338 480 7.57e-28 115
Msa1254080 MtrunA17_Chr7g0265151 24.131 489 285 15 1 419 1 473 1.08e-27 115
Msa1254080 MtrunA17_Chr2g0294931 39.456 147 79 3 283 422 331 474 1.29e-27 114
Msa1254080 MtrunA17_Chr7g0243851 37.179 156 87 3 276 422 282 435 1.75e-27 114
Msa1254080 MtrunA17_Chr8g0374971 40.541 148 77 5 283 422 329 473 1.91e-27 114
Msa1254080 MtrunA17_Chr7g0243711 36.774 155 85 3 277 422 159 309 2.45e-27 111
Msa1254080 MtrunA17_Chr8g0382021 38.255 149 85 2 283 427 345 490 2.79e-27 113
Msa1254080 MtrunA17_Chr3g0118691 24.846 487 277 17 9 427 15 480 3.30e-27 113
Msa1254080 MtrunA17_Chr6g0463861 37.580 157 89 3 273 422 312 466 4.13e-27 113
Msa1254080 MtrunA17_Chr2g0329111 27.352 457 249 20 10 403 7 443 4.49e-27 113
Msa1254080 MtrunA17_Chr5g0410941 37.415 147 82 3 283 422 339 482 9.03e-27 112
Msa1254080 MtrunA17_Chr8g0337381 41.085 129 69 2 298 426 1 122 9.89e-27 104
Msa1254080 MtrunA17_Chr5g0420801 27.126 494 263 22 1 431 1 460 9.93e-27 112
Msa1254080 MtrunA17_Chr4g0066141 35.443 158 93 2 273 423 190 345 1.54e-26 109
Msa1254080 MtrunA17_Chr6g0454301 26.789 489 265 25 9 427 263 728 1.77e-26 112
Msa1254080 MtrunA17_Chr6g0454301 36.170 141 78 3 287 427 99 227 2.41e-20 94.0
Msa1254080 MtrunA17_Chr8g0374941 37.342 158 88 4 273 422 1256 1410 2.61e-26 112
Msa1254080 MtrunA17_Chr8g0374941 36.486 148 83 5 273 412 318 462 4.68e-23 102
Msa1254080 MtrunA17_Chr8g0374941 34.559 136 80 2 283 411 793 926 8.02e-21 95.9
Msa1254080 MtrunA17_Chr1g0173121 35.185 162 94 4 272 427 308 464 2.64e-26 110
Msa1254080 MtrunA17_Chr1g0159551 35.185 162 94 4 272 427 305 461 2.72e-26 110
Msa1254080 MtrunA17_Chr5g0419771 25.697 502 286 21 6 434 31 518 3.55e-26 110
Msa1254080 MtrunA17_Chr3g0118771 24.897 486 276 16 2 419 14 478 3.72e-26 110
Msa1254080 MtrunA17_Chr5g0431371 24.837 459 277 16 3 418 4 437 3.93e-26 110
Msa1254080 MtrunA17_Chr5g0401851 35.948 153 90 2 276 422 326 476 4.61e-26 110
Msa1254080 MtrunA17_Chr1g0207881 31.780 236 131 8 201 435 184 390 7.64e-26 108
Msa1254080 MtrunA17_Chr5g0431421 24.045 445 288 13 8 418 9 437 8.86e-26 108
Msa1254080 MtrunA17_Chr7g0235051 37.931 145 81 3 285 422 304 446 8.99e-26 108
Msa1254080 MtrunA17_Chr2g0294921 36.735 147 83 3 283 422 480 623 9.17e-26 110
Msa1254080 MtrunA17_Chr7g0218311 37.415 147 82 3 283 422 333 476 1.16e-25 108
Msa1254080 MtrunA17_Chr5g0428081 38.776 147 80 4 283 422 329 472 1.36e-25 108
Msa1254080 MtrunA17_Chr8g0374901 37.162 148 82 4 283 422 327 471 1.42e-25 108
Msa1254080 MtrunA17_Chr7g0265041 37.714 175 93 4 254 419 311 478 5.40e-25 107
Msa1254080 MtrunA17_Chr6g0454171 37.241 145 79 4 283 427 175 307 6.04e-25 104
Msa1254080 MtrunA17_Chr5g0416741 38.298 141 77 3 289 422 339 476 6.36e-25 107
Msa1254080 MtrunA17_Chr6g0454151 35.714 154 83 5 283 434 343 482 6.40e-25 106
Msa1254080 MtrunA17_Chr5g0431361 24.348 460 283 17 2 418 5 442 7.45e-25 106
Msa1254080 MtrunA17_Chr8g0355221 35.862 145 85 2 287 425 340 482 8.97e-25 106
Msa1254080 MtrunA17_Chr2g0307961 27.061 473 265 15 2 418 9 457 1.05e-24 105
Msa1254080 MtrunA17_Chr3g0112771 25.364 481 261 17 9 430 12 453 1.07e-24 105
Msa1254080 MtrunA17_Chr7g0243761 24.313 473 263 20 9 422 11 447 1.25e-24 105
Msa1254080 MtrunA17_Chr5g0414331 26.338 467 262 19 3 418 7 442 1.49e-24 105
Msa1254080 MtrunA17_Chr6g0464871 25.732 478 244 20 8 418 22 455 1.55e-24 105
Msa1254080 MtrunA17_Chr5g0431441 23.400 453 296 10 9 422 18 458 1.67e-24 105
Msa1254080 MtrunA17_Chr8g0366391 39.007 141 84 1 283 423 333 471 1.89e-24 105
Msa1254080 MtrunA17_Chr8g0350881 36.735 147 84 3 283 422 329 473 1.94e-24 105
Msa1254080 MtrunA17_Chr8g0355011 28.783 337 192 16 111 425 47 357 3.69e-24 103
Msa1254080 MtrunA17_Chr6g0454371 37.405 131 69 3 299 427 49 168 3.76e-24 98.6
Msa1254080 MtrunA17_Chr8g0374931 35.862 145 83 3 283 420 331 472 4.09e-24 104
Msa1254080 MtrunA17_Chr8g0369341 24.848 495 283 17 1 431 1 470 4.86e-24 104
Msa1254080 MtrunA17_Chr3g0118701 23.647 499 280 18 9 433 15 486 5.95e-24 103
Msa1254080 MtrunA17_Chr1g0179901 38.365 159 83 6 283 430 341 495 1.09e-23 103
Msa1254080 MtrunA17_Chr5g0431401 23.673 452 281 15 8 418 9 437 1.41e-23 102
Msa1254080 MtrunA17_Chr6g0454291 41.985 131 63 4 299 427 355 474 1.46e-23 102
Msa1254080 MtrunA17_Chr8g0359821 24.111 506 271 20 2 427 3 475 1.64e-23 102
Msa1254080 MtrunA17_Chr7g0217881 38.168 131 68 3 299 427 340 459 2.20e-23 102
Msa1254080 MtrunA17_Chr6g0454211 27.957 372 199 14 110 427 408 764 2.23e-23 103
Msa1254080 MtrunA17_Chr3g0118751 26.991 452 266 19 9 419 6 434 2.24e-23 102
Msa1254080 MtrunA17_Chr4g0050341 38.060 134 71 3 287 420 360 481 3.16e-23 102
Msa1254080 MtrunA17_Chr7g0265111 24.845 483 283 18 19 433 49 519 3.39e-23 102
Msa1254080 MtrunA17_Chr2g0294941 31.928 166 103 3 254 412 200 362 3.44e-23 100
Msa1254080 MtrunA17_Chr3g0106231 24.670 454 269 19 8 418 17 440 3.70e-23 101
Msa1254080 MtrunA17_Chr1g0207951 35.099 151 90 3 283 432 968 1111 3.98e-23 102
Msa1254080 MtrunA17_Chr1g0207951 23.935 493 279 20 1 432 116 573 1.23e-21 98.2
Msa1254080 MtrunA17_Chr6g0454201 36.054 147 78 4 283 427 346 478 4.40e-23 101
Msa1254080 MtrunA17_Chr6g0454331 39.007 141 70 5 287 425 348 474 4.61e-23 101
Msa1254080 MtrunA17_Chr3g0098111 24.274 482 277 20 1 418 1 458 6.32e-23 100
Msa1254080 MtrunA17_Chr3g0118721 37.857 140 71 4 283 420 155 280 7.34e-23 98.2
Msa1254080 MtrunA17_Chr6g0454131 38.931 131 70 4 297 427 356 476 8.07e-23 100
Msa1254080 MtrunA17_Chr6g0454221 37.063 143 74 4 287 427 100 228 8.89e-23 98.2
Msa1254080 MtrunA17_Chr5g0423981 36.957 138 74 4 299 434 323 449 9.44e-23 100
Msa1254080 MtrunA17_Chr6g0454191 36.170 141 78 3 287 427 350 478 1.76e-22 99.8
Msa1254080 MtrunA17_Chr1g0165701 33.793 145 88 2 287 425 337 479 2.20e-22 99.4
Msa1254080 MtrunA17_Chr7g0243911 35.556 135 74 3 287 412 83 213 2.24e-22 95.1
Msa1254080 MtrunA17_Chr5g0426401 27.244 312 150 12 170 425 20 310 2.90e-22 96.7
Msa1254080 MtrunA17_Chr1g0207831 24.694 490 270 18 10 432 9 466 3.64e-22 98.6
Msa1254080 MtrunA17_Chr6g0463891 36.552 145 81 3 289 425 339 480 4.61e-22 98.6
Msa1254080 MtrunA17_Chr3g0118671 37.410 139 71 4 283 419 339 463 6.80e-22 97.8
Msa1254080 MtrunA17_Chr6g0454141 35.664 143 76 5 287 427 349 477 7.05e-22 97.8
Msa1254080 MtrunA17_Chr6g0454361 39.837 123 61 4 299 419 359 470 8.69e-22 97.4
Msa1254080 MtrunA17_Chr1g0207931 36.496 137 79 3 283 418 357 486 9.69e-22 97.4
Msa1254080 MtrunA17_Chr6g0453961 34.694 147 80 4 283 427 355 487 9.97e-22 97.4
Msa1254080 MtrunA17_Chr6g0454321 40.870 115 55 3 299 411 356 459 1.33e-21 97.8
Msa1254080 MtrunA17_Chr5g0432731 35.246 122 76 2 299 419 167 286 1.38e-21 94.7
Msa1254080 MtrunA17_Chr6g0454121 36.364 143 75 5 287 427 348 476 1.43e-21 97.1
Msa1254080 MtrunA17_Chr6g0454181 35.659 129 74 2 299 427 358 477 1.64e-21 96.7
Msa1254080 MtrunA17_Chr4g0053501 24.116 481 297 17 4 433 6 469 1.73e-21 96.7
Msa1254080 MtrunA17_Chr1g0161351 23.722 489 281 18 9 431 37 499 1.74e-21 96.7
Msa1254080 MtrunA17_Chr3g0118711 34.014 147 81 4 283 427 346 478 1.75e-21 96.7
Msa1254080 MtrunA17_Chr6g0454271 34.965 143 77 4 287 427 156 284 1.86e-21 94.0
Msa1254080 MtrunA17_Chr7g0243611 49.351 77 39 0 285 361 195 271 5.03e-21 92.8
Msa1254080 MtrunA17_Chr6g0452771 36.364 143 75 5 287 427 349 477 5.54e-21 95.1
Msa1254080 MtrunA17_Chr6g0454401 37.209 129 72 3 299 427 359 478 6.21e-21 95.1
Msa1254080 MtrunA17_Chr6g0464861 24.839 467 259 19 9 418 11 442 6.58e-21 94.7
Msa1254080 MtrunA17_Chr3g0112761 23.679 473 272 18 8 425 7 445 6.99e-21 94.7
Msa1254080 MtrunA17_Chr5g0401721 24.847 491 257 24 5 418 4 459 1.38e-20 94.0
Msa1254080 MtrunA17_Chr1g0207971 35.099 151 88 5 283 432 315 456 2.09e-20 93.2
Msa1254080 MtrunA17_Chr5g0414321 25.156 481 252 19 2 418 4 440 2.49e-20 93.2
Msa1254080 MtrunA17_Chr7g0249931 23.810 462 283 16 7 422 38 476 5.31e-20 92.0
Msa1254080 MtrunA17_Chr8g0365811 33.824 136 84 2 283 418 817 946 5.86e-20 92.8
Msa1254080 MtrunA17_Chr8g0365811 23.861 461 234 18 1 378 1 427 9.34e-19 89.4
Msa1254080 MtrunA17_Chr2g0278711 39.130 138 69 5 283 418 341 465 7.43e-20 91.7
Msa1254080 MtrunA17_Chr6g0449991 28.621 290 178 8 5 278 2 278 7.98e-20 90.1
Msa1254080 MtrunA17_Chr1g0207861 36.232 138 80 4 282 418 327 457 8.75e-20 91.7
Msa1254080 MtrunA17_Chr4g0072761 25.143 350 215 11 111 429 119 452 8.96e-20 91.3
Msa1254080 MtrunA17_Chr3g0106251 35.000 120 77 1 299 418 164 282 9.97e-20 89.7
Msa1254080 MtrunA17_Chr8g0336261 38.053 113 56 4 283 393 36 136 1.02e-19 85.1
Msa1254080 MtrunA17_Chr6g0454231 29.915 234 132 9 205 427 4 216 1.03e-19 91.3
Msa1254080 MtrunA17_Chr6g0454261 34.266 143 78 4 287 427 349 477 1.15e-19 91.3
Msa1254080 MtrunA17_Chr4g0044501 32.847 137 90 1 287 423 335 469 1.22e-19 91.3
Msa1254080 MtrunA17_Chr4g0044481 49.398 83 40 1 283 365 321 401 1.70e-19 90.1
Msa1254080 MtrunA17_Chr6g0453951 35.659 129 74 3 299 427 405 524 1.89e-19 90.9
Msa1254080 MtrunA17_Chr4g0053321 33.987 153 92 5 282 433 340 484 2.58e-19 90.1
Msa1254080 MtrunA17_Chr6g0464841 36.029 136 78 4 283 418 317 443 2.67e-19 89.7
Msa1254080 MtrunA17_Chr5g0409591 37.069 116 69 2 282 397 346 457 2.68e-19 90.1
Msa1254080 MtrunA17_Chr4g0072771 34.694 147 85 4 283 429 330 465 5.27e-19 89.0
Msa1254080 MtrunA17_Chr1g0207981 29.348 184 109 5 242 418 292 461 7.17e-19 88.6
Msa1254080 MtrunA17_Chr7g0243731 41.772 79 46 0 291 369 1 79 7.66e-19 80.9
Msa1254080 MtrunA17_Chr3g0118661 35.374 147 79 5 283 427 345 477 1.04e-18 88.2
Msa1254080 MtrunA17_Chr7g0243811 35.172 145 73 4 242 376 255 388 1.48e-18 87.0
Msa1254080 MtrunA17_Chr4g0032331 38.636 132 66 4 300 429 331 449 1.54e-18 87.4
Msa1254080 MtrunA17_Chr5g0426431 34.722 144 80 4 283 425 343 473 2.17e-18 87.4
Msa1254080 MtrunA17_Chr5g0426431 28.302 265 154 11 5 246 8 259 7.09e-12 67.0
Msa1254080 MtrunA17_Chr7g0241781 40.310 129 66 6 288 414 296 415 2.76e-18 86.7
Msa1254080 MtrunA17_Chr5g0393591 26.722 363 205 14 96 432 111 438 3.66e-18 86.3
Msa1254080 MtrunA17_Chr6g0464881 34.559 136 80 4 283 418 317 443 5.56e-18 85.9
Msa1254080 MtrunA17_Chr8g0380531 23.579 475 289 18 6 431 7 456 7.15e-18 85.5
Msa1254080 MtrunA17_Chr3g0079721 26.866 268 171 9 5 256 3 261 9.64e-18 83.2
Msa1254080 MtrunA17_Chr5g0412131 35.099 151 78 6 281 429 337 469 2.87e-17 84.0
Msa1254080 MtrunA17_Chr5g0412101 35.417 144 78 5 288 429 340 470 3.15e-17 83.6
Msa1254080 MtrunA17_Chr5g0416821 34.641 153 72 5 281 422 331 466 5.18e-17 83.2
Msa1254080 MtrunA17_Chr5g0412111 33.113 151 81 5 281 429 329 461 1.54e-16 81.6
Msa1254080 MtrunA17_Chr8g0377921 33.333 117 76 1 302 418 338 452 5.25e-16 79.7
Msa1254080 MtrunA17_Chr3g0092641 33.103 145 85 4 283 427 343 475 6.18e-16 79.7
Msa1254080 MtrunA17_Chr3g0092641 27.957 279 145 15 1 246 4 259 9.15e-12 66.6
Msa1254080 MtrunA17_Chr3g0122001 35.115 131 80 3 294 423 341 467 6.23e-16 80.5
Msa1254080 MtrunA17_Chr3g0122001 33.588 131 83 2 294 424 821 947 2.65e-15 78.6
Msa1254080 MtrunA17_Chr8g0377941 33.913 115 74 1 302 416 336 448 7.30e-16 79.3
Msa1254080 MtrunA17_Chr7g0249961 30.872 149 93 4 283 430 122 261 7.93e-16 77.4
Msa1254080 MtrunA17_Chr7g0250001 31.690 142 84 4 292 426 316 451 1.20e-15 79.0
Msa1254080 MtrunA17_Chr7g0249981 30.872 149 93 4 283 430 329 468 1.34e-15 79.0
Msa1254080 MtrunA17_Chr7g0231631 33.333 141 70 4 289 422 129 252 1.38e-15 76.6
Msa1254080 MtrunA17_Chr7g0218821 30.769 143 85 5 276 418 311 439 2.69e-15 77.8
Msa1254080 MtrunA17_Chr7g0241801 36.719 128 72 5 288 414 296 415 3.08e-15 77.4
Msa1254080 MtrunA17_Chr3g0121991 33.077 130 82 3 289 418 410 534 3.45e-15 77.8
Msa1254080 MtrunA17_Chr5g0431431 25.084 299 167 13 137 402 88 362 1.32e-14 75.1
Msa1254080 MtrunA17_Chr7g0218831 28.467 137 76 4 276 396 300 430 1.33e-14 75.5
Msa1254080 MtrunA17_Chr4g0029131 30.723 166 100 8 276 432 309 468 3.23e-14 74.7
Msa1254080 MtrunA17_Chr1g0196851 22.222 459 274 18 1 400 41 475 3.64e-14 74.3
Msa1254080 MtrunA17_Chr8g0367221 37.209 129 74 4 277 405 1599 1720 3.82e-14 75.1
Msa1254080 MtrunA17_Chr8g0367221 32.558 129 80 5 277 405 1109 1230 4.56e-14 74.7
Msa1254080 MtrunA17_Chr8g0367221 31.373 153 92 7 277 426 322 464 3.66e-13 72.0
Msa1254080 MtrunA17_Chr7g0218841 28.467 137 76 4 276 396 301 431 4.60e-14 73.9
Msa1254080 MtrunA17_Chr8g0357361 43.210 81 43 2 281 361 172 249 4.88e-14 72.0
Msa1254080 MtrunA17_Chr7g0218811 31.933 119 72 4 303 420 331 441 5.60e-14 73.6
Msa1254080 MtrunA17_Chr6g0464921 29.932 147 91 4 273 419 311 445 5.69e-14 73.6
Msa1254080 MtrunA17_Chr4g0040691 31.008 129 81 4 279 404 313 436 6.70e-14 73.6
Msa1254080 MtrunA17_Chr7g0218791 30.709 127 76 4 303 427 329 445 8.97e-14 72.8
Msa1254080 MtrunA17_Chr2g0319761 22.581 434 274 15 18 405 17 434 1.50e-13 72.4
Msa1254080 MtrunA17_Chr5g0442501 26.210 248 166 7 8 247 4 242 1.69e-13 71.2
Msa1254080 MtrunA17_Chr4g0069611 33.929 168 99 8 250 412 285 445 1.76e-13 72.0
Msa1254080 MtrunA17_Chr2g0278741 37.405 131 74 6 283 412 409 532 1.94e-13 72.4
Msa1254080 MtrunA17_Chr2g0319751 22.768 448 261 23 17 414 16 428 2.93e-13 72.0
Msa1254080 MtrunA17_Chr2g0319751 30.405 148 89 7 277 414 786 929 2.83e-12 68.9
Msa1254080 MtrunA17_Chr5g0448551 43.836 73 40 1 283 355 314 385 4.89e-13 70.9
Msa1254080 MtrunA17_Chr3g0092031 35.714 112 67 4 283 394 59 165 7.71e-13 67.4
Msa1254080 MtrunA17_Chr4g0029151 34.091 132 75 6 276 400 317 443 1.11e-12 69.7
Msa1254080 MtrunA17_Chr2g0319791 29.054 148 91 6 277 414 309 452 1.48e-12 69.3
Msa1254080 MtrunA17_Chr2g0283041 32.174 115 73 3 283 397 314 423 1.52e-12 69.3
Msa1254080 MtrunA17_Chr4g0040711 22.072 444 267 15 17 404 16 436 2.14e-12 68.6
Msa1254080 MtrunA17_Chr2g0278721 36.641 131 75 6 283 412 327 450 2.17e-12 69.3
Msa1254080 MtrunA17_Chr8g0336251 34.328 134 74 6 270 403 320 439 2.18e-12 68.6
Msa1254080 MtrunA17_Chr8g0336321 34.328 134 74 6 270 403 320 439 2.47e-12 68.6
Msa1254080 MtrunA17_Chr2g0302851 39.286 112 59 5 283 392 323 427 5.61e-12 67.4
Msa1254080 MtrunA17_Chr4g0039881 37.273 110 64 4 283 392 299 403 7.81e-12 67.0
Msa1254080 MtrunA17_Chr2g0319801 35.000 120 67 5 283 398 315 427 1.67e-11 65.9
Msa1254080 MtrunA17_Chr5g0427571 33.898 118 72 4 283 400 161 272 1.89e-11 64.7
Msa1254080 MtrunA17_Chr2g0319731 33.333 117 73 4 283 398 332 444 5.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254080 AT2G18570.1 42.581 465 216 11 9 427 5 464 4.27e-119 356
Msa1254080 AT2G18560.1 42.359 373 167 8 98 427 7 374 3.13e-99 301
Msa1254080 AT3G50740.1 35.654 474 245 11 6 426 4 470 1.64e-96 298
Msa1254080 AT5G26310.1 35.220 477 243 11 4 427 2 465 3.25e-93 290
Msa1254080 AT5G66690.1 34.591 477 246 12 4 427 2 465 5.52e-91 284
Msa1254080 AT4G01070.1 34.298 484 229 14 7 426 6 464 1.97e-80 256
Msa1254080 AT1G01420.1 32.981 473 249 11 7 426 6 463 1.26e-79 254
Msa1254080 AT1G01420.2 32.981 473 249 11 7 426 9 466 1.30e-79 254
Msa1254080 AT1G01390.1 32.627 472 251 11 7 425 6 463 1.22e-73 239
Msa1254080 AT1G01390.2 32.627 472 251 11 7 425 23 480 1.48e-73 239
Msa1254080 AT4G36770.1 34.812 451 233 13 12 412 7 446 3.52e-73 237
Msa1254080 AT3G16520.3 28.908 467 260 13 10 423 6 453 2.55e-53 185
Msa1254080 AT3G16520.1 28.384 458 256 13 10 414 6 444 6.56e-50 176
Msa1254080 AT3G16520.2 28.384 458 256 13 10 414 6 444 7.36e-50 175
Msa1254080 AT2G29730.1 27.564 468 266 17 10 422 6 455 2.40e-45 164
Msa1254080 AT3G21790.1 28.717 491 248 17 10 422 5 471 9.08e-44 160
Msa1254080 AT2G29710.1 25.586 469 278 12 8 422 4 455 2.27e-42 155
Msa1254080 AT1G07250.1 28.964 473 254 16 10 418 7 461 2.58e-42 156
Msa1254080 AT4G15280.2 28.600 493 253 17 4 422 31 498 4.88e-41 153
Msa1254080 AT1G07260.1 28.008 482 264 15 5 422 2 464 5.60e-41 152
Msa1254080 AT3G21800.1 28.743 501 249 18 10 431 6 477 5.91e-41 152
Msa1254080 AT4G15280.1 28.747 487 248 17 10 422 5 466 7.84e-41 152
Msa1254080 AT4G01070.2 33.708 267 148 6 7 260 6 256 1.81e-40 148
Msa1254080 AT1G07240.1 26.157 497 279 16 7 434 3 480 4.56e-40 150
Msa1254080 AT2G29740.1 24.694 490 288 15 3 430 2 472 8.25e-40 149
Msa1254080 AT3G21780.1 29.436 479 250 19 10 422 5 461 1.17e-39 149
Msa1254080 AT3G21750.1 28.814 472 262 16 10 422 5 461 3.14e-39 147
Msa1254080 AT3G21760.1 27.668 506 254 18 10 431 5 482 4.64e-38 144
Msa1254080 AT2G29750.1 24.742 485 274 15 8 424 7 468 2.18e-35 137
Msa1254080 AT1G10400.1 26.752 471 272 19 9 425 7 458 1.25e-32 129
Msa1254080 AT2G31790.1 27.950 483 242 19 3 418 2 445 1.41e-31 125
Msa1254080 AT2G15480.2 27.216 485 267 19 19 430 20 491 3.44e-31 125
Msa1254080 AT4G15260.1 30.362 359 185 12 117 422 1 347 4.40e-31 122
Msa1254080 AT2G15480.1 27.197 478 266 19 19 430 20 481 3.18e-30 122
Msa1254080 AT2G15490.1 25.620 484 269 18 19 430 17 481 5.58e-30 122
Msa1254080 AT2G15490.3 42.000 150 80 3 283 430 334 478 1.72e-29 120
Msa1254080 AT2G30140.2 24.946 461 291 10 9 433 13 454 2.75e-29 119
Msa1254080 AT2G30140.1 24.892 462 291 10 9 433 13 455 2.78e-29 119
Msa1254080 AT1G22400.1 25.051 491 251 21 2 411 8 462 4.17e-29 119
Msa1254080 AT4G34131.1 25.620 484 271 18 9 423 10 473 2.35e-28 117
Msa1254080 AT2G36770.1 38.608 158 85 3 283 432 338 491 2.36e-28 117
Msa1254080 AT2G16890.2 25.581 473 290 18 9 431 9 469 2.33e-27 114
Msa1254080 AT2G36760.1 25.306 490 288 17 9 432 14 491 2.79e-27 114
Msa1254080 AT2G36800.1 39.474 152 80 4 286 429 340 487 7.74e-27 112
Msa1254080 AT3G53160.1 41.558 154 80 4 286 432 335 485 9.63e-27 112
Msa1254080 AT1G22360.1 24.899 494 252 24 1 411 1 458 9.76e-27 112
Msa1254080 AT2G36780.1 40.268 149 77 3 283 423 338 482 1.55e-26 112
Msa1254080 AT1G22340.1 26.096 479 249 24 9 411 13 462 2.73e-26 111
Msa1254080 AT1G24100.1 26.526 475 280 16 5 431 7 460 2.93e-26 110
Msa1254080 AT5G14860.1 25.949 474 284 21 6 422 5 468 3.15e-26 111
Msa1254080 AT2G31750.1 24.059 478 286 15 4 429 3 455 3.36e-26 110
Msa1254080 AT5G12890.1 41.259 143 78 3 282 422 336 474 4.06e-26 110
Msa1254080 AT2G31750.2 24.059 478 286 15 4 429 3 455 4.85e-26 110
Msa1254080 AT4G34135.1 24.945 457 252 16 2 386 4 441 6.85e-26 110
Msa1254080 AT4G34138.1 40.714 140 70 4 283 418 337 467 1.06e-25 109
Msa1254080 AT2G36790.1 36.842 152 84 3 286 429 340 487 1.98e-25 108
Msa1254080 AT2G36970.1 23.467 473 276 18 9 418 10 459 2.00e-25 108
Msa1254080 AT5G05880.1 25.773 485 252 21 10 430 9 449 5.57e-25 107
Msa1254080 AT2G36750.1 38.158 152 82 4 286 429 336 483 8.47e-25 107
Msa1254080 AT1G22380.1 23.125 480 273 17 3 411 7 461 9.56e-25 106
Msa1254080 AT3G46700.1 26.141 482 261 20 1 427 1 442 1.15e-24 106
Msa1254080 AT1G51210.1 25.503 447 248 21 9 404 20 432 1.20e-24 105
Msa1254080 AT1G73880.1 24.274 482 275 20 2 422 7 459 2.25e-24 105
Msa1254080 AT1G78270.1 26.294 483 245 23 16 419 20 470 5.42e-24 104
Msa1254080 AT3G46680.1 24.797 492 264 21 1 429 1 449 5.87e-24 103
Msa1254080 AT3G53150.1 36.025 161 82 5 274 418 343 498 8.84e-24 103
Msa1254080 AT5G59590.1 24.839 467 262 19 10 422 11 442 1.34e-23 103
Msa1254080 AT3G46670.1 26.033 484 253 23 1 422 1 441 1.48e-23 102
Msa1254080 AT5G03490.1 23.491 464 293 17 9 431 19 461 1.80e-23 102
Msa1254080 AT3G46690.1 23.469 490 279 15 1 432 1 452 2.67e-23 102
Msa1254080 AT5G05860.1 24.109 477 284 14 1 429 1 447 2.76e-23 102
Msa1254080 AT1G22360.2 24.494 445 226 21 1 362 1 418 2.93e-23 102
Msa1254080 AT2G16890.3 25.647 425 258 15 9 384 9 424 2.94e-23 101
Msa1254080 AT1G05675.1 25.826 484 245 20 5 418 2 441 3.96e-23 101
Msa1254080 AT1G05680.1 24.385 488 269 18 5 429 2 452 8.01e-23 100
Msa1254080 AT5G05900.1 25.157 477 264 20 10 430 9 448 9.28e-23 100
Msa1254080 AT5G59580.1 24.066 482 272 20 10 435 10 453 1.74e-22 99.8
Msa1254080 AT5G05890.1 25.000 480 268 21 9 430 8 453 4.22e-22 98.6
Msa1254080 AT3G55700.1 25.820 488 246 21 9 425 8 450 6.58e-22 98.2
Msa1254080 AT3G11340.1 23.602 483 276 19 1 429 1 444 7.40e-22 97.8
Msa1254080 AT2G30150.2 24.947 469 279 16 9 431 13 454 7.58e-22 97.8
Msa1254080 AT5G05870.1 23.125 480 277 14 5 425 4 450 7.91e-22 97.8
Msa1254080 AT2G30150.1 24.892 462 274 16 16 431 4 438 3.23e-21 95.9
Msa1254080 AT4G15480.1 26.902 368 191 17 101 418 128 467 7.30e-21 95.1
Msa1254080 AT1G06000.1 35.000 140 82 3 283 422 296 426 1.23e-20 94.0
Msa1254080 AT2G23260.1 28.571 266 134 7 200 422 194 446 2.33e-20 93.6
Msa1254080 AT2G43820.1 34.416 154 90 5 281 431 304 449 3.27e-20 92.8
Msa1254080 AT3G46660.1 24.224 483 279 19 1 429 6 455 3.38e-20 93.2
Msa1254080 AT2G26480.1 27.763 389 200 15 97 432 88 448 7.79e-20 92.0
Msa1254080 AT3G46720.1 25.052 479 276 21 1 432 1 443 7.85e-20 91.7
Msa1254080 AT5G17050.1 23.718 468 292 16 8 430 11 458 1.07e-19 91.7
Msa1254080 AT2G43840.2 35.971 139 77 5 283 418 306 435 8.78e-19 88.6
Msa1254080 AT2G43840.1 35.971 139 77 5 283 418 306 435 9.62e-19 88.6
Msa1254080 AT4G15490.1 34.848 132 82 2 302 432 342 470 1.01e-18 88.6
Msa1254080 AT4G14090.1 22.777 461 292 12 1 418 5 444 1.81e-18 87.8
Msa1254080 AT2G23250.1 33.065 124 79 1 299 422 309 428 1.94e-18 87.4
Msa1254080 AT1G05560.2 40.000 125 68 3 294 418 373 490 2.82e-18 87.4
Msa1254080 AT2G28080.1 22.807 456 278 16 16 418 25 459 3.72e-18 87.0
Msa1254080 AT1G05560.1 40.000 125 68 3 294 418 323 440 4.20e-18 86.7
Msa1254080 AT4G15500.1 34.188 117 74 1 302 418 338 451 4.54e-18 86.7
Msa1254080 AT5G17040.1 32.927 246 131 12 182 419 210 429 4.70e-18 86.3
Msa1254080 AT5G38010.1 23.505 485 266 19 9 429 10 453 5.90e-18 86.3
Msa1254080 AT5G17030.1 38.571 140 71 6 282 419 319 445 5.90e-18 86.3
Msa1254080 AT5G65550.1 37.121 132 74 5 283 412 323 447 9.85e-18 85.5
Msa1254080 AT3G21560.1 34.615 130 79 3 289 418 338 461 1.07e-17 85.5
Msa1254080 AT5G17040.2 32.927 246 131 12 182 419 108 327 1.27e-17 84.3
Msa1254080 AT4G15550.1 38.168 131 70 4 296 422 343 466 1.74e-17 84.7
Msa1254080 AT1G05530.1 40.741 135 67 5 286 418 320 443 3.12e-17 84.0
Msa1254080 AT3G46650.1 23.404 470 262 19 10 429 11 432 4.37e-17 83.6
Msa1254080 AT1G30530.1 24.854 342 207 12 111 418 114 439 1.29e-16 82.0
Msa1254080 AT1G64910.1 37.984 129 70 5 283 407 300 422 3.40e-16 80.9
Msa1254080 AT1G22370.1 40.741 81 43 2 283 361 170 247 8.35e-16 78.2
Msa1254080 AT3G29630.2 25.926 405 260 15 17 405 14 394 9.20e-16 79.3
Msa1254080 AT5G54010.1 36.508 126 72 3 279 400 302 423 1.21e-15 79.3
Msa1254080 AT5G38040.1 23.922 464 266 20 19 429 20 449 1.43e-15 79.0
Msa1254080 AT1G22370.2 40.741 81 43 2 283 361 340 417 1.88e-15 78.6
Msa1254080 AT3G55710.1 35.570 149 76 7 283 425 320 454 3.68e-15 77.8
Msa1254080 AT3G29630.1 36.641 131 71 5 279 405 298 420 4.29e-15 77.4
Msa1254080 AT5G53990.1 35.338 133 76 4 279 407 296 422 9.61e-15 76.3
Msa1254080 AT5G49690.1 23.077 455 269 18 1 401 2 429 1.04e-14 76.3
Msa1254080 AT4G27560.1 35.714 126 73 3 279 400 302 423 1.45e-14 75.9
Msa1254080 AT4G27570.1 35.714 126 73 3 279 400 302 423 1.67e-14 75.5
Msa1254080 AT1G50580.1 35.659 129 73 4 283 407 301 423 9.44e-14 73.2
Msa1254080 AT4G09500.1 34.109 129 75 5 283 407 275 397 1.12e-13 72.8
Msa1254080 AT4G09500.2 34.109 129 75 5 283 407 300 422 1.30e-13 72.8
Msa1254080 AT1G64920.1 28.659 164 106 5 277 435 294 451 1.40e-13 72.8
Msa1254080 AT3G22250.1 31.250 144 84 5 266 408 311 440 1.61e-13 72.8
Msa1254080 AT2G22930.1 34.167 120 71 4 283 398 300 415 2.29e-13 72.0
Msa1254080 AT5G54060.1 46.479 71 36 1 283 353 325 393 2.82e-12 68.9
Msa1254080 AT3G02100.1 30.370 135 83 2 300 432 337 462 8.04e-12 67.4

Find 135 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTACATAGACGAATTT+TGG 0.153795 8_2:+52008181 None:intergenic
CATGGTTACTCTTCCCATTT+TGG 0.177198 8_2:+52007238 None:intergenic
AGGAATTTGTGGCTGATTTC+AGG 0.195756 8_2:+52008410 None:intergenic
ATCCCACGTGTTTACTAAAA+TGG 0.212232 8_2:+52007952 None:intergenic
AGGAAATTTGTGATGGGATT+TGG 0.212244 8_2:+52008371 None:intergenic
TTTGGTGAGAAAGGTTATTT+TGG 0.236778 8_2:-52007265 Msa1254080:CDS
TACTAAAATGGCATCACTTT+TGG 0.238509 8_2:+52007964 None:intergenic
GTTCGTGTATTCTCCTCTTT+TGG 0.254613 8_2:-52008137 Msa1254080:CDS
GCACTCATTGTTGATATATT+CGG 0.281730 8_2:-52008241 Msa1254080:CDS
GATAGCAAGTTTGGTGAGAA+AGG 0.326332 8_2:-52007274 Msa1254080:CDS
GAGGGAAGAGATAGCAAGTT+TGG 0.326627 8_2:-52007283 Msa1254080:CDS
GGAGAGAGTGAGAGAGGTTA+AGG 0.329389 8_2:-52007211 Msa1254080:CDS
TAAAGCGGCCAAGCAATAAT+AGG 0.336903 8_2:+52007399 None:intergenic
GTGGAGTCGGTGGCGGAGAC+GGG 0.340506 8_2:+52008340 None:intergenic
GTTTGTGAGGGCGGATTTGA+TGG 0.343689 8_2:+52008282 None:intergenic
CGGTGGCGGAGACGGGGAGG+AGG 0.347278 8_2:+52008347 None:intergenic
TGTATTTGCAGTTGGCCCTT+TGG 0.347552 8_2:-52007858 Msa1254080:CDS
AGATTCTGCTTGTGAGGTTT+GGG 0.350626 8_2:+52008438 None:intergenic
CTTTATACTTCAAGTCGTTT+CGG 0.355767 8_2:+52008014 None:intergenic
AGACAAACCGAGTCAGAAAT+AGG 0.372069 8_2:-52007833 Msa1254080:intron
GAGGATGAATGCGGCGTTGC+TGG 0.373328 8_2:-52007367 Msa1254080:CDS
GAGATTCTGCTTGTGAGGTT+TGG 0.392945 8_2:+52008437 None:intergenic
GGTGGAGTCGGTGGCGGAGA+CGG 0.401960 8_2:+52008339 None:intergenic
TGTTGATATATTCGGAATAG+AGG 0.409945 8_2:-52008233 Msa1254080:CDS
TTTGCTCAACGTATTGTCCT+TGG 0.418452 8_2:+52008104 None:intergenic
AAAGAGGAGAATACACGAAC+AGG 0.418904 8_2:+52008140 None:intergenic
GTGGTGGATCACCAAGCGTT+TGG 0.432969 8_2:+52008492 None:intergenic
GGCGGAGACGGGGAGGAGGG+AGG 0.435030 8_2:+52008351 None:intergenic
TGGAGTCGGTGGCGGAGACG+GGG 0.443413 8_2:+52008341 None:intergenic
CTGCTATCAAGTCCAGGCCT+AGG 0.449575 8_2:-52008541 Msa1254080:CDS
GCGTTTGGCGAGTTCGATGA+TGG 0.453617 8_2:+52008507 None:intergenic
TTGTGATGGGATTTGGATGA+TGG 0.455750 8_2:+52008378 None:intergenic
GAGAATAAAGAATAAGAATG+TGG 0.459595 8_2:-52007538 Msa1254080:CDS
TTGAAACATCCTTCGATTGG+TGG 0.465806 8_2:-52007477 Msa1254080:CDS
GGTCGAACCGGTTTACAACC+TGG 0.468394 8_2:+52008064 None:intergenic
TGGATTTGTTTGTCCAAAAG+AGG 0.468933 8_2:+52008124 None:intergenic
TGCAGAGAAAGCTTTGTGCC+AGG 0.470501 8_2:-52007184 Msa1254080:CDS
GACAGAGAGGCGGGTGGAGT+CGG 0.472546 8_2:+52008327 None:intergenic
AGTCGGTGGCGGAGACGGGG+AGG 0.475545 8_2:+52008344 None:intergenic
TCTATGTAGCTTCACAAGCT+TGG 0.481395 8_2:-52008171 Msa1254080:CDS
GAAAATCCCAGGTTGTAAAC+CGG 0.483876 8_2:-52008071 Msa1254080:CDS
GAGGCGGGTGGAGTCGGTGG+CGG 0.484338 8_2:+52008333 None:intergenic
TGGGTTTGTTAGTTCATGAA+TGG 0.486838 8_2:-52007518 Msa1254080:CDS
AAAGGGCCAACTGCAAATAC+AGG 0.494277 8_2:+52007860 None:intergenic
GGGATGAGATGCCCTAGGCC+TGG 0.495407 8_2:+52008529 None:intergenic
AGAATAAAGAATAAGAATGT+GGG 0.497694 8_2:-52007537 Msa1254080:CDS
ACTAAATCTACTGGTCGAAC+CGG 0.502246 8_2:+52008052 None:intergenic
GGATTGTGAGTTTGAAATTG+TGG 0.502808 8_2:+52008473 None:intergenic
CAATGAGTGCTGAAGGGAGG+AGG 0.505960 8_2:+52008254 None:intergenic
GGGCGGATTTGATGGAAGGT+AGG 0.508065 8_2:+52008290 None:intergenic
AAAGTTCCTGTATTTGCAGT+TGG 0.513811 8_2:-52007866 Msa1254080:CDS
GATTTGAGATTCTGCTTGTG+AGG 0.515177 8_2:+52008432 None:intergenic
TTTGTTTCACACTGTGGATG+GGG 0.517829 8_2:-52007453 Msa1254080:CDS
GTCGAACCGGTTTACAACCT+GGG 0.518383 8_2:+52008065 None:intergenic
GGCGGATTTGATGGAAGGTA+GGG 0.518837 8_2:+52008291 None:intergenic
TATTGCTTGGCCGCTTTACG+CGG 0.521293 8_2:-52007394 Msa1254080:CDS
AAGTCGTTTCGGTTCAGCAT+GGG 0.521324 8_2:+52008025 None:intergenic
TGATAGCAGGACCACGTTTG+CGG 0.521874 8_2:+52008555 None:intergenic
GGAAGCAGTGGTGACGCGTT+TGG 0.522891 8_2:-52007612 Msa1254080:CDS
AGAGAGGCGGGTGGAGTCGG+TGG 0.522929 8_2:+52008330 None:intergenic
CGAGGAAGAATCAGCTGGTA+GGG 0.523411 8_2:-52007305 Msa1254080:CDS
GTGAGGGCGGATTTGATGGA+AGG 0.523477 8_2:+52008286 None:intergenic
CTCTCACTCTCTCCCTCACA+TGG 0.524401 8_2:+52007220 None:intergenic
TAGCTTACCTATTTCTGACT+CGG 0.524925 8_2:+52007826 None:intergenic
CATCGAACTCGCCAAACGCT+TGG 0.526303 8_2:-52008503 Msa1254080:CDS
AAAGCACTTAATGATGAAGA+TGG 0.528111 8_2:-52007908 Msa1254080:CDS
ACGGTGTGCCTATTATTGCT+TGG 0.528160 8_2:-52007407 Msa1254080:CDS
GGCCGCTTTACGCGGAGCAG+AGG 0.528291 8_2:-52007386 Msa1254080:CDS
GAATGCGGCGTTGCTGGTGG+AGG 0.529060 8_2:-52007361 Msa1254080:CDS
ATGGGATCAACTAAATCTAC+TGG 0.529129 8_2:+52008043 None:intergenic
GGTGTAGAGGGAGGAATTTG+TGG 0.530650 8_2:+52008399 None:intergenic
GACTCGGTTTGTCTAACCAA+AGG 0.532401 8_2:+52007842 None:intergenic
ATATCAACAATGAGTGCTGA+AGG 0.534043 8_2:+52008247 None:intergenic
GAGGGGTAAGTTTGTGAGGG+CGG 0.535780 8_2:+52008273 None:intergenic
GAAGAATCAGCTGGTAGGGA+GGG 0.537487 8_2:-52007301 Msa1254080:CDS
GCTGGTGGAGGAGCTTGGCA+TGG 0.542555 8_2:-52007349 Msa1254080:CDS
CTAGGCCTGGACTTGATAGC+AGG 0.544024 8_2:+52008542 None:intergenic
CAAGTCGTTTCGGTTCAGCA+TGG 0.544281 8_2:+52008024 None:intergenic
TGCTATCAAGTCCAGGCCTA+GGG 0.545009 8_2:-52008540 Msa1254080:CDS
GGGTTTGTTAGTTCATGAAT+GGG 0.547473 8_2:-52007517 Msa1254080:CDS
GGTGGCGGAGACGGGGAGGA+GGG 0.550922 8_2:+52008348 None:intergenic
CGTTTGGCGAGTTCGATGAT+GGG 0.551073 8_2:+52008508 None:intergenic
AGGAGGGAGGAAATTTGTGA+TGG 0.551238 8_2:+52008364 None:intergenic
GCGTTGCTGGTGGAGGAGCT+TGG 0.552578 8_2:-52007354 Msa1254080:CDS
ATTCTCTCTACAAACCCCTC+AGG 0.555674 8_2:+52007555 None:intergenic
GGAGGAGGGGTAAGTTTGTG+AGG 0.566040 8_2:+52008269 None:intergenic
ACTCGGTTTGTCTAACCAAA+GGG 0.566531 8_2:+52007843 None:intergenic
GATGAACTTGATGATCAGAT+AGG 0.566730 8_2:-52007588 Msa1254080:CDS
GTGGTCCTGCTATCAAGTCC+AGG 0.567104 8_2:-52008547 Msa1254080:CDS
GCAGAGAAAGCTTTGTGCCA+GGG 0.567426 8_2:-52007183 Msa1254080:CDS
AATGAGTGCTGAAGGGAGGA+GGG 0.567528 8_2:+52008255 None:intergenic
CCGAGGAAGAATCAGCTGGT+AGG 0.568180 8_2:-52007306 Msa1254080:CDS
GGAGGGAGGAAATTTGTGAT+GGG 0.569758 8_2:+52008365 None:intergenic
AAAGATCCGTTGAAAATCCC+AGG 0.570491 8_2:-52008082 Msa1254080:CDS
ACGTGCGTCCACAGAAGCTG+TGG 0.573578 8_2:-52007655 Msa1254080:intron
TTGGATGATGGTGTAGAGGG+AGG 0.583893 8_2:+52008390 None:intergenic
GGATTTGGATGATGGTGTAG+AGG 0.586736 8_2:+52008386 None:intergenic
CCTACCAGCTGATTCTTCCT+CGG 0.588248 8_2:+52007306 None:intergenic
ATAGGTAAGCATTTACCTGA+GGG 0.590644 8_2:-52007570 Msa1254080:CDS
GATTTGGATGATGGTGTAGA+GGG 0.591504 8_2:+52008387 None:intergenic
TGGCATGGCGGTGAAGACTA+CGG 0.591696 8_2:-52007334 Msa1254080:CDS
ACACATTGTGACAGAGAGGC+GGG 0.591744 8_2:+52008318 None:intergenic
GATGAATGCGGCGTTGCTGG+TGG 0.592792 8_2:-52007364 Msa1254080:CDS
TTGTGAGTTTGAAATTGTGG+TGG 0.595619 8_2:+52008476 None:intergenic
GAGGAGGGGTAAGTTTGTGA+GGG 0.597381 8_2:+52008270 None:intergenic
GTCTCCGAGGAAGAATCAGC+TGG 0.600905 8_2:-52007310 Msa1254080:CDS
AGCAATAATAGGCACACCGT+TGG 0.602836 8_2:+52007410 None:intergenic
TGATGGGGATGAGATGCCCT+AGG 0.604446 8_2:+52008524 None:intergenic
TGTGAGGGAGAGAGTGAGAG+AGG 0.607051 8_2:-52007217 Msa1254080:CDS
CGCGTCACCACTGCTTCCAG+TGG 0.611295 8_2:+52007617 None:intergenic
ATCCTCTGCTCCGCGTAAAG+CGG 0.615497 8_2:+52007384 None:intergenic
GATAGGTAAGCATTTACCTG+AGG 0.623860 8_2:-52007571 Msa1254080:CDS
ATGGGAAGAGTAACCATGTG+AGG 0.624236 8_2:-52007233 Msa1254080:CDS
GACACATTGTGACAGAGAGG+CGG 0.624442 8_2:+52008317 None:intergenic
GGAAGAATCAGCTGGTAGGG+AGG 0.626703 8_2:-52007302 Msa1254080:CDS
GTTTGGCGAGTTCGATGATG+GGG 0.627924 8_2:+52008509 None:intergenic
TTGTGAGGTTTGGGAAGTGA+CGG 0.630306 8_2:+52008447 None:intergenic
TATCAACAATGAGTGCTGAA+GGG 0.634792 8_2:+52008248 None:intergenic
GAGAAAGCTTTGTGCCAGGG+TGG 0.639350 8_2:-52007180 Msa1254080:CDS
CATTATAAGACGAACCACCC+TGG 0.641308 8_2:+52007166 None:intergenic
GAAACAAAACCACCAATCGA+AGG 0.646233 8_2:+52007468 None:intergenic
TGGGAAGAGTAACCATGTGA+GGG 0.654871 8_2:-52007232 Msa1254080:CDS
AAGAGGAGAATACACGAACA+GGG 0.655044 8_2:+52008141 None:intergenic
CAACAATGAGTGCTGAAGGG+AGG 0.656927 8_2:+52008251 None:intergenic
TGTTTCAAAACAGTTACTTG+TGG 0.658118 8_2:+52007492 None:intergenic
TAGGTAAGCATTTACCTGAG+GGG 0.664120 8_2:-52007569 Msa1254080:CDS
GGTGGAGGAGCTTGGCATGG+CGG 0.666532 8_2:-52007346 Msa1254080:CDS
ATGAGTGCTGAAGGGAGGAG+GGG 0.678409 8_2:+52008256 None:intergenic
GCACAAGACTACCGCAAACG+TGG 0.678881 8_2:-52008566 Msa1254080:CDS
AGGTTTGGGAAGTGACGGCG+AGG 0.691492 8_2:+52008452 None:intergenic
CATTGTGACAGAGAGGCGGG+TGG 0.692790 8_2:+52008321 None:intergenic
CGCGGAGCAGAGGATGAATG+CGG 0.693313 8_2:-52007376 Msa1254080:CDS
TGAAGACTACGGTGTCTCCG+AGG 0.698802 8_2:-52007323 Msa1254080:CDS
GTGCTTGAGAGTATAACCAA+CGG 0.703393 8_2:-52007426 Msa1254080:CDS
AGTGACACATTGTGACAGAG+AGG 0.733291 8_2:+52008314 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAAAGAATAAGAATGT+GGG - chr8_2:52008150-52008169 Msa1254080:CDS 20.0%
!! AGAATAAAGAATAAGAATGT+GGG - chr8_2:52008150-52008169 Msa1254080:CDS 20.0%
! TTTATCAAGCCATTGAATTA+CGG + chr8_2:52007893-52007912 None:intergenic 25.0%
!! TAAGTGAACAAAGATTTGTT+TGG - chr8_2:52008004-52008023 Msa1254080:CDS 25.0%
!! AAGTGAACAAAGATTTGTTT+GGG - chr8_2:52008005-52008024 Msa1254080:CDS 25.0%
! GAGAATAAAGAATAAGAATG+TGG - chr8_2:52008149-52008168 Msa1254080:CDS 25.0%
! TTTATCAAGCCATTGAATTA+CGG + chr8_2:52007893-52007912 None:intergenic 25.0%
!! TAAGTGAACAAAGATTTGTT+TGG - chr8_2:52008004-52008023 Msa1254080:CDS 25.0%
!! AAGTGAACAAAGATTTGTTT+GGG - chr8_2:52008005-52008024 Msa1254080:CDS 25.0%
! GAGAATAAAGAATAAGAATG+TGG - chr8_2:52008149-52008168 Msa1254080:CDS 25.0%
GCACTCATTGTTGATATATT+CGG - chr8_2:52007446-52007465 Msa1254080:CDS 30.0%
TGTTGATATATTCGGAATAG+AGG - chr8_2:52007454-52007473 Msa1254080:CDS 30.0%
CTTTATACTTCAAGTCGTTT+CGG + chr8_2:52007676-52007695 None:intergenic 30.0%
! TACTAAAATGGCATCACTTT+TGG + chr8_2:52007726-52007745 None:intergenic 30.0%
! AAAGCACTTAATGATGAAGA+TGG - chr8_2:52007779-52007798 Msa1254080:intron 30.0%
! CAAATGAAGGAAATAGCTTT+TGG - chr8_2:52007973-52007992 Msa1254080:CDS 30.0%
TGTTTCAAAACAGTTACTTG+TGG + chr8_2:52008198-52008217 None:intergenic 30.0%
! TTTGGTGAGAAAGGTTATTT+TGG - chr8_2:52008422-52008441 Msa1254080:CDS 30.0%
!!! TTATTTTGGTGGACCAAAAT+GGG - chr8_2:52008436-52008455 Msa1254080:CDS 30.0%
GCACTCATTGTTGATATATT+CGG - chr8_2:52007446-52007465 Msa1254080:CDS 30.0%
TGTTGATATATTCGGAATAG+AGG - chr8_2:52007454-52007473 Msa1254080:CDS 30.0%
CTTTATACTTCAAGTCGTTT+CGG + chr8_2:52007676-52007695 None:intergenic 30.0%
! TACTAAAATGGCATCACTTT+TGG + chr8_2:52007726-52007745 None:intergenic 30.0%
! AAAGCACTTAATGATGAAGA+TGG - chr8_2:52007779-52007798 Msa1254080:intron 30.0%
! CAAATGAAGGAAATAGCTTT+TGG - chr8_2:52007973-52007992 Msa1254080:CDS 30.0%
TGTTTCAAAACAGTTACTTG+TGG + chr8_2:52008198-52008217 None:intergenic 30.0%
! TTTGGTGAGAAAGGTTATTT+TGG - chr8_2:52008422-52008441 Msa1254080:CDS 30.0%
!!! TTATTTTGGTGGACCAAAAT+GGG - chr8_2:52008436-52008455 Msa1254080:CDS 30.0%
! TTGTGAGTTTGAAATTGTGG+TGG + chr8_2:52007214-52007233 None:intergenic 35.0%
! GGATTGTGAGTTTGAAATTG+TGG + chr8_2:52007217-52007236 None:intergenic 35.0%
! AGGAAATTTGTGATGGGATT+TGG + chr8_2:52007319-52007338 None:intergenic 35.0%
!! TATCAACAATGAGTGCTGAA+GGG + chr8_2:52007442-52007461 None:intergenic 35.0%
!! ATATCAACAATGAGTGCTGA+AGG + chr8_2:52007443-52007462 None:intergenic 35.0%
! GAAGCTACATAGACGAATTT+TGG + chr8_2:52007509-52007528 None:intergenic 35.0%
! TGGATTTGTTTGTCCAAAAG+AGG + chr8_2:52007566-52007585 None:intergenic 35.0%
! CTTTTGGACAAACAAATCCA+AGG - chr8_2:52007566-52007585 Msa1254080:CDS 35.0%
! TTACAACCTGGGATTTTCAA+CGG + chr8_2:52007614-52007633 None:intergenic 35.0%
ATGGGATCAACTAAATCTAC+TGG + chr8_2:52007647-52007666 None:intergenic 35.0%
!! ATCACTTTTGGAGAGGTTAT+TGG + chr8_2:52007714-52007733 None:intergenic 35.0%
!!! ATGCCATTTTAGTAAACACG+TGG - chr8_2:52007732-52007751 Msa1254080:intron 35.0%
!!! TGCCATTTTAGTAAACACGT+GGG - chr8_2:52007733-52007752 Msa1254080:intron 35.0%
ATCCCACGTGTTTACTAAAA+TGG + chr8_2:52007738-52007757 None:intergenic 35.0%
AAAGTTCCTGTATTTGCAGT+TGG - chr8_2:52007821-52007840 Msa1254080:intron 35.0%
!! TAGCTTACCTATTTCTGACT+CGG + chr8_2:52007864-52007883 None:intergenic 35.0%
ATGGCTTGATAAACAACCAA+AGG - chr8_2:52007900-52007919 Msa1254080:CDS 35.0%
TAAACAACCAAAGGAATCAG+TGG - chr8_2:52007909-52007928 Msa1254080:CDS 35.0%
!! ACATAAACCACTGATTCCTT+TGG + chr8_2:52007919-52007938 None:intergenic 35.0%
TCAGTGGTTTATGTTTCGTT+TGG - chr8_2:52007925-52007944 Msa1254080:CDS 35.0%
CAGTGGTTTATGTTTCGTTT+GGG - chr8_2:52007926-52007945 Msa1254080:CDS 35.0%
! TGAACAAAGATTTGTTTGGG+TGG - chr8_2:52008008-52008027 Msa1254080:CDS 35.0%
! GATGAACTTGATGATCAGAT+AGG - chr8_2:52008099-52008118 Msa1254080:CDS 35.0%
ATAGGTAAGCATTTACCTGA+GGG - chr8_2:52008117-52008136 Msa1254080:CDS 35.0%
!! TGGGTTTGTTAGTTCATGAA+TGG - chr8_2:52008169-52008188 Msa1254080:CDS 35.0%
!! GGGTTTGTTAGTTCATGAAT+GGG - chr8_2:52008170-52008189 Msa1254080:CDS 35.0%
!!! GTTTTGAAACATCCTTCGAT+TGG - chr8_2:52008207-52008226 Msa1254080:CDS 35.0%
!! TTTTGTTTCACACTGTGGAT+GGG - chr8_2:52008233-52008252 Msa1254080:CDS 35.0%
!!! GTTATTTTGGTGGACCAAAA+TGG - chr8_2:52008435-52008454 Msa1254080:CDS 35.0%
! TTGTGAGTTTGAAATTGTGG+TGG + chr8_2:52007214-52007233 None:intergenic 35.0%
! GGATTGTGAGTTTGAAATTG+TGG + chr8_2:52007217-52007236 None:intergenic 35.0%
! AGGAAATTTGTGATGGGATT+TGG + chr8_2:52007319-52007338 None:intergenic 35.0%
!! TATCAACAATGAGTGCTGAA+GGG + chr8_2:52007442-52007461 None:intergenic 35.0%
!! ATATCAACAATGAGTGCTGA+AGG + chr8_2:52007443-52007462 None:intergenic 35.0%
! GAAGCTACATAGACGAATTT+TGG + chr8_2:52007509-52007528 None:intergenic 35.0%
! TGGATTTGTTTGTCCAAAAG+AGG + chr8_2:52007566-52007585 None:intergenic 35.0%
! CTTTTGGACAAACAAATCCA+AGG - chr8_2:52007566-52007585 Msa1254080:CDS 35.0%
! TTACAACCTGGGATTTTCAA+CGG + chr8_2:52007614-52007633 None:intergenic 35.0%
ATGGGATCAACTAAATCTAC+TGG + chr8_2:52007647-52007666 None:intergenic 35.0%
!! ATCACTTTTGGAGAGGTTAT+TGG + chr8_2:52007714-52007733 None:intergenic 35.0%
!!! ATGCCATTTTAGTAAACACG+TGG - chr8_2:52007732-52007751 Msa1254080:intron 35.0%
!!! TGCCATTTTAGTAAACACGT+GGG - chr8_2:52007733-52007752 Msa1254080:intron 35.0%
ATCCCACGTGTTTACTAAAA+TGG + chr8_2:52007738-52007757 None:intergenic 35.0%
AAAGTTCCTGTATTTGCAGT+TGG - chr8_2:52007821-52007840 Msa1254080:intron 35.0%
!! TAGCTTACCTATTTCTGACT+CGG + chr8_2:52007864-52007883 None:intergenic 35.0%
ATGGCTTGATAAACAACCAA+AGG - chr8_2:52007900-52007919 Msa1254080:CDS 35.0%
TAAACAACCAAAGGAATCAG+TGG - chr8_2:52007909-52007928 Msa1254080:CDS 35.0%
!! ACATAAACCACTGATTCCTT+TGG + chr8_2:52007919-52007938 None:intergenic 35.0%
TCAGTGGTTTATGTTTCGTT+TGG - chr8_2:52007925-52007944 Msa1254080:CDS 35.0%
CAGTGGTTTATGTTTCGTTT+GGG - chr8_2:52007926-52007945 Msa1254080:CDS 35.0%
! TGAACAAAGATTTGTTTGGG+TGG - chr8_2:52008008-52008027 Msa1254080:CDS 35.0%
! GATGAACTTGATGATCAGAT+AGG - chr8_2:52008099-52008118 Msa1254080:CDS 35.0%
ATAGGTAAGCATTTACCTGA+GGG - chr8_2:52008117-52008136 Msa1254080:CDS 35.0%
!! TGGGTTTGTTAGTTCATGAA+TGG - chr8_2:52008169-52008188 Msa1254080:CDS 35.0%
!! GGGTTTGTTAGTTCATGAAT+GGG - chr8_2:52008170-52008189 Msa1254080:CDS 35.0%
!!! GTTTTGAAACATCCTTCGAT+TGG - chr8_2:52008207-52008226 Msa1254080:CDS 35.0%
!! TTTTGTTTCACACTGTGGAT+GGG - chr8_2:52008233-52008252 Msa1254080:CDS 35.0%
!!! GTTATTTTGGTGGACCAAAA+TGG - chr8_2:52008435-52008454 Msa1254080:CDS 35.0%
AGATTCTGCTTGTGAGGTTT+GGG + chr8_2:52007252-52007271 None:intergenic 40.0%
! GATTTGAGATTCTGCTTGTG+AGG + chr8_2:52007258-52007277 None:intergenic 40.0%
! AGGAATTTGTGGCTGATTTC+AGG + chr8_2:52007280-52007299 None:intergenic 40.0%
! GATTTGGATGATGGTGTAGA+GGG + chr8_2:52007303-52007322 None:intergenic 40.0%
! TTGTGATGGGATTTGGATGA+TGG + chr8_2:52007312-52007331 None:intergenic 40.0%
TCTATGTAGCTTCACAAGCT+TGG - chr8_2:52007516-52007535 Msa1254080:CDS 40.0%
AAGAGGAGAATACACGAACA+GGG + chr8_2:52007549-52007568 None:intergenic 40.0%
AAAGAGGAGAATACACGAAC+AGG + chr8_2:52007550-52007569 None:intergenic 40.0%
! GTTCGTGTATTCTCCTCTTT+TGG - chr8_2:52007550-52007569 Msa1254080:CDS 40.0%
TTTGCTCAACGTATTGTCCT+TGG + chr8_2:52007586-52007605 None:intergenic 40.0%
AAAGATCCGTTGAAAATCCC+AGG - chr8_2:52007605-52007624 Msa1254080:CDS 40.0%
GAAAATCCCAGGTTGTAAAC+CGG - chr8_2:52007616-52007635 Msa1254080:CDS 40.0%
ACTAAATCTACTGGTCGAAC+CGG + chr8_2:52007638-52007657 None:intergenic 40.0%
!! AAATGGCATCACTTTTGGAG+AGG + chr8_2:52007721-52007740 None:intergenic 40.0%
! ACTCGGTTTGTCTAACCAAA+GGG + chr8_2:52007847-52007866 None:intergenic 40.0%
AGACAAACCGAGTCAGAAAT+AGG - chr8_2:52007854-52007873 Msa1254080:CDS 40.0%
AAGCCATTGAATTACGGACT+CGG + chr8_2:52007887-52007906 None:intergenic 40.0%
GTTTATGTTTCGTTTGGGAG+CGG - chr8_2:52007931-52007950 Msa1254080:CDS 40.0%
TTTGTCGTGTGAGCAAATGA+AGG - chr8_2:52007960-52007979 Msa1254080:CDS 40.0%
GATAGGTAAGCATTTACCTG+AGG - chr8_2:52008116-52008135 Msa1254080:CDS 40.0%
TAGGTAAGCATTTACCTGAG+GGG - chr8_2:52008118-52008137 Msa1254080:CDS 40.0%
TTGAAACATCCTTCGATTGG+TGG - chr8_2:52008210-52008229 Msa1254080:CDS 40.0%
GAAACAAAACCACCAATCGA+AGG + chr8_2:52008222-52008241 None:intergenic 40.0%
!!! GTTTTGTTTCACACTGTGGA+TGG - chr8_2:52008232-52008251 Msa1254080:CDS 40.0%
TTTGTTTCACACTGTGGATG+GGG - chr8_2:52008234-52008253 Msa1254080:CDS 40.0%
! GTGCTTGAGAGTATAACCAA+CGG - chr8_2:52008261-52008280 Msa1254080:CDS 40.0%
TAAAGCGGCCAAGCAATAAT+AGG + chr8_2:52008291-52008310 None:intergenic 40.0%
! GATAGCAAGTTTGGTGAGAA+AGG - chr8_2:52008413-52008432 Msa1254080:CDS 40.0%
!!! GGTGAGAAAGGTTATTTTGG+TGG - chr8_2:52008425-52008444 Msa1254080:CDS 40.0%
! CATGGTTACTCTTCCCATTT+TGG + chr8_2:52008452-52008471 None:intergenic 40.0%
AGATTCTGCTTGTGAGGTTT+GGG + chr8_2:52007252-52007271 None:intergenic 40.0%
! GATTTGAGATTCTGCTTGTG+AGG + chr8_2:52007258-52007277 None:intergenic 40.0%
! AGGAATTTGTGGCTGATTTC+AGG + chr8_2:52007280-52007299 None:intergenic 40.0%
! GATTTGGATGATGGTGTAGA+GGG + chr8_2:52007303-52007322 None:intergenic 40.0%
! TTGTGATGGGATTTGGATGA+TGG + chr8_2:52007312-52007331 None:intergenic 40.0%
TCTATGTAGCTTCACAAGCT+TGG - chr8_2:52007516-52007535 Msa1254080:CDS 40.0%
AAGAGGAGAATACACGAACA+GGG + chr8_2:52007549-52007568 None:intergenic 40.0%
AAAGAGGAGAATACACGAAC+AGG + chr8_2:52007550-52007569 None:intergenic 40.0%
! GTTCGTGTATTCTCCTCTTT+TGG - chr8_2:52007550-52007569 Msa1254080:CDS 40.0%
TTTGCTCAACGTATTGTCCT+TGG + chr8_2:52007586-52007605 None:intergenic 40.0%
AAAGATCCGTTGAAAATCCC+AGG - chr8_2:52007605-52007624 Msa1254080:CDS 40.0%
GAAAATCCCAGGTTGTAAAC+CGG - chr8_2:52007616-52007635 Msa1254080:CDS 40.0%
ACTAAATCTACTGGTCGAAC+CGG + chr8_2:52007638-52007657 None:intergenic 40.0%
!! AAATGGCATCACTTTTGGAG+AGG + chr8_2:52007721-52007740 None:intergenic 40.0%
! ACTCGGTTTGTCTAACCAAA+GGG + chr8_2:52007847-52007866 None:intergenic 40.0%
AGACAAACCGAGTCAGAAAT+AGG - chr8_2:52007854-52007873 Msa1254080:CDS 40.0%
AAGCCATTGAATTACGGACT+CGG + chr8_2:52007887-52007906 None:intergenic 40.0%
GTTTATGTTTCGTTTGGGAG+CGG - chr8_2:52007931-52007950 Msa1254080:CDS 40.0%
TTTGTCGTGTGAGCAAATGA+AGG - chr8_2:52007960-52007979 Msa1254080:CDS 40.0%
GATAGGTAAGCATTTACCTG+AGG - chr8_2:52008116-52008135 Msa1254080:CDS 40.0%
TAGGTAAGCATTTACCTGAG+GGG - chr8_2:52008118-52008137 Msa1254080:CDS 40.0%
TTGAAACATCCTTCGATTGG+TGG - chr8_2:52008210-52008229 Msa1254080:CDS 40.0%
GAAACAAAACCACCAATCGA+AGG + chr8_2:52008222-52008241 None:intergenic 40.0%
!!! GTTTTGTTTCACACTGTGGA+TGG - chr8_2:52008232-52008251 Msa1254080:CDS 40.0%
TTTGTTTCACACTGTGGATG+GGG - chr8_2:52008234-52008253 Msa1254080:CDS 40.0%
! GTGCTTGAGAGTATAACCAA+CGG - chr8_2:52008261-52008280 Msa1254080:CDS 40.0%
TAAAGCGGCCAAGCAATAAT+AGG + chr8_2:52008291-52008310 None:intergenic 40.0%
! GATAGCAAGTTTGGTGAGAA+AGG - chr8_2:52008413-52008432 Msa1254080:CDS 40.0%
!!! GGTGAGAAAGGTTATTTTGG+TGG - chr8_2:52008425-52008444 Msa1254080:CDS 40.0%
! CATGGTTACTCTTCCCATTT+TGG + chr8_2:52008452-52008471 None:intergenic 40.0%
TTGTGAGGTTTGGGAAGTGA+CGG + chr8_2:52007243-52007262 None:intergenic 45.0%
GAGATTCTGCTTGTGAGGTT+TGG + chr8_2:52007253-52007272 None:intergenic 45.0%
! GGATTTGGATGATGGTGTAG+AGG + chr8_2:52007304-52007323 None:intergenic 45.0%
GGAGGGAGGAAATTTGTGAT+GGG + chr8_2:52007325-52007344 None:intergenic 45.0%
AGGAGGGAGGAAATTTGTGA+TGG + chr8_2:52007326-52007345 None:intergenic 45.0%
AGTGACACATTGTGACAGAG+AGG + chr8_2:52007376-52007395 None:intergenic 45.0%
AAGTCGTTTCGGTTCAGCAT+GGG + chr8_2:52007665-52007684 None:intergenic 45.0%
AAAGGGCCAACTGCAAATAC+AGG + chr8_2:52007830-52007849 None:intergenic 45.0%
TGTATTTGCAGTTGGCCCTT+TGG - chr8_2:52007829-52007848 Msa1254080:intron 45.0%
! GACTCGGTTTGTCTAACCAA+AGG + chr8_2:52007848-52007867 None:intergenic 45.0%
CTACCGAGTCCGTAATTCAA+TGG - chr8_2:52007881-52007900 Msa1254080:CDS 45.0%
! TTTTTCACCACTGGAAGCAG+TGG - chr8_2:52008063-52008082 Msa1254080:CDS 45.0%
ATTCTCTCTACAAACCCCTC+AGG + chr8_2:52008135-52008154 None:intergenic 45.0%
!!! GGTGGTTTTGTTTCACACTG+TGG - chr8_2:52008228-52008247 Msa1254080:CDS 45.0%
AGCAATAATAGGCACACCGT+TGG + chr8_2:52008280-52008299 None:intergenic 45.0%
ACGGTGTGCCTATTATTGCT+TGG - chr8_2:52008280-52008299 Msa1254080:CDS 45.0%
GAGGGAAGAGATAGCAAGTT+TGG - chr8_2:52008404-52008423 Msa1254080:CDS 45.0%
ATGGGAAGAGTAACCATGTG+AGG - chr8_2:52008454-52008473 Msa1254080:CDS 45.0%
TGGGAAGAGTAACCATGTGA+GGG - chr8_2:52008455-52008474 Msa1254080:CDS 45.0%
CATTATAAGACGAACCACCC+TGG + chr8_2:52008524-52008543 None:intergenic 45.0%
TTGTGAGGTTTGGGAAGTGA+CGG + chr8_2:52007243-52007262 None:intergenic 45.0%
GAGATTCTGCTTGTGAGGTT+TGG + chr8_2:52007253-52007272 None:intergenic 45.0%
! GGATTTGGATGATGGTGTAG+AGG + chr8_2:52007304-52007323 None:intergenic 45.0%
GGAGGGAGGAAATTTGTGAT+GGG + chr8_2:52007325-52007344 None:intergenic 45.0%
AGGAGGGAGGAAATTTGTGA+TGG + chr8_2:52007326-52007345 None:intergenic 45.0%
AGTGACACATTGTGACAGAG+AGG + chr8_2:52007376-52007395 None:intergenic 45.0%
AAGTCGTTTCGGTTCAGCAT+GGG + chr8_2:52007665-52007684 None:intergenic 45.0%
AAAGGGCCAACTGCAAATAC+AGG + chr8_2:52007830-52007849 None:intergenic 45.0%
TGTATTTGCAGTTGGCCCTT+TGG - chr8_2:52007829-52007848 Msa1254080:intron 45.0%
! GACTCGGTTTGTCTAACCAA+AGG + chr8_2:52007848-52007867 None:intergenic 45.0%
CTACCGAGTCCGTAATTCAA+TGG - chr8_2:52007881-52007900 Msa1254080:CDS 45.0%
! TTTTTCACCACTGGAAGCAG+TGG - chr8_2:52008063-52008082 Msa1254080:CDS 45.0%
ATTCTCTCTACAAACCCCTC+AGG + chr8_2:52008135-52008154 None:intergenic 45.0%
!!! GGTGGTTTTGTTTCACACTG+TGG - chr8_2:52008228-52008247 Msa1254080:CDS 45.0%
AGCAATAATAGGCACACCGT+TGG + chr8_2:52008280-52008299 None:intergenic 45.0%
ACGGTGTGCCTATTATTGCT+TGG - chr8_2:52008280-52008299 Msa1254080:CDS 45.0%
GAGGGAAGAGATAGCAAGTT+TGG - chr8_2:52008404-52008423 Msa1254080:CDS 45.0%
ATGGGAAGAGTAACCATGTG+AGG - chr8_2:52008454-52008473 Msa1254080:CDS 45.0%
TGGGAAGAGTAACCATGTGA+GGG - chr8_2:52008455-52008474 Msa1254080:CDS 45.0%
CATTATAAGACGAACCACCC+TGG + chr8_2:52008524-52008543 None:intergenic 45.0%
TGATAGCAGGACCACGTTTG+CGG + chr8_2:52007135-52007154 None:intergenic 50.0%
TGCTATCAAGTCCAGGCCTA+GGG - chr8_2:52007147-52007166 Msa1254080:CDS 50.0%
GTTTGGCGAGTTCGATGATG+GGG + chr8_2:52007181-52007200 None:intergenic 50.0%
CGTTTGGCGAGTTCGATGAT+GGG + chr8_2:52007182-52007201 None:intergenic 50.0%
GGTGTAGAGGGAGGAATTTG+TGG + chr8_2:52007291-52007310 None:intergenic 50.0%
! TTGGATGATGGTGTAGAGGG+AGG + chr8_2:52007300-52007319 None:intergenic 50.0%
ACACATTGTGACAGAGAGGC+GGG + chr8_2:52007372-52007391 None:intergenic 50.0%
GACACATTGTGACAGAGAGG+CGG + chr8_2:52007373-52007392 None:intergenic 50.0%
! GGCGGATTTGATGGAAGGTA+GGG + chr8_2:52007399-52007418 None:intergenic 50.0%
! GTTTGTGAGGGCGGATTTGA+TGG + chr8_2:52007408-52007427 None:intergenic 50.0%
GAGGAGGGGTAAGTTTGTGA+GGG + chr8_2:52007420-52007439 None:intergenic 50.0%
!! AATGAGTGCTGAAGGGAGGA+GGG + chr8_2:52007435-52007454 None:intergenic 50.0%
!! CAACAATGAGTGCTGAAGGG+AGG + chr8_2:52007439-52007458 None:intergenic 50.0%
! GTCGAACCGGTTTACAACCT+GGG + chr8_2:52007625-52007644 None:intergenic 50.0%
CAAGTCGTTTCGGTTCAGCA+TGG + chr8_2:52007666-52007685 None:intergenic 50.0%
TATGTTTCGTTTGGGAGCGG+TGG - chr8_2:52007934-52007953 Msa1254080:CDS 50.0%
! TATTGCTTGGCCGCTTTACG+CGG - chr8_2:52008293-52008312 Msa1254080:CDS 50.0%
! CCTACCAGCTGATTCTTCCT+CGG + chr8_2:52008384-52008403 None:intergenic 50.0%
CGAGGAAGAATCAGCTGGTA+GGG - chr8_2:52008382-52008401 Msa1254080:CDS 50.0%
GAAGAATCAGCTGGTAGGGA+GGG - chr8_2:52008386-52008405 Msa1254080:CDS 50.0%
GGAGAGAGTGAGAGAGGTTA+AGG - chr8_2:52008476-52008495 Msa1254080:CDS 50.0%
! TGCAGAGAAAGCTTTGTGCC+AGG - chr8_2:52008503-52008522 Msa1254080:CDS 50.0%
! GCAGAGAAAGCTTTGTGCCA+GGG - chr8_2:52008504-52008523 Msa1254080:CDS 50.0%
TGATAGCAGGACCACGTTTG+CGG + chr8_2:52007135-52007154 None:intergenic 50.0%
TGCTATCAAGTCCAGGCCTA+GGG - chr8_2:52007147-52007166 Msa1254080:CDS 50.0%
GTTTGGCGAGTTCGATGATG+GGG + chr8_2:52007181-52007200 None:intergenic 50.0%
CGTTTGGCGAGTTCGATGAT+GGG + chr8_2:52007182-52007201 None:intergenic 50.0%
GGTGTAGAGGGAGGAATTTG+TGG + chr8_2:52007291-52007310 None:intergenic 50.0%
! TTGGATGATGGTGTAGAGGG+AGG + chr8_2:52007300-52007319 None:intergenic 50.0%
ACACATTGTGACAGAGAGGC+GGG + chr8_2:52007372-52007391 None:intergenic 50.0%
GACACATTGTGACAGAGAGG+CGG + chr8_2:52007373-52007392 None:intergenic 50.0%
! GGCGGATTTGATGGAAGGTA+GGG + chr8_2:52007399-52007418 None:intergenic 50.0%
! GTTTGTGAGGGCGGATTTGA+TGG + chr8_2:52007408-52007427 None:intergenic 50.0%
GAGGAGGGGTAAGTTTGTGA+GGG + chr8_2:52007420-52007439 None:intergenic 50.0%
!! AATGAGTGCTGAAGGGAGGA+GGG + chr8_2:52007435-52007454 None:intergenic 50.0%
!! CAACAATGAGTGCTGAAGGG+AGG + chr8_2:52007439-52007458 None:intergenic 50.0%
! GTCGAACCGGTTTACAACCT+GGG + chr8_2:52007625-52007644 None:intergenic 50.0%
CAAGTCGTTTCGGTTCAGCA+TGG + chr8_2:52007666-52007685 None:intergenic 50.0%
TATGTTTCGTTTGGGAGCGG+TGG - chr8_2:52007934-52007953 Msa1254080:CDS 50.0%
! TATTGCTTGGCCGCTTTACG+CGG - chr8_2:52008293-52008312 Msa1254080:CDS 50.0%
! CCTACCAGCTGATTCTTCCT+CGG + chr8_2:52008384-52008403 None:intergenic 50.0%
CGAGGAAGAATCAGCTGGTA+GGG - chr8_2:52008382-52008401 Msa1254080:CDS 50.0%
GAAGAATCAGCTGGTAGGGA+GGG - chr8_2:52008386-52008405 Msa1254080:CDS 50.0%
GGAGAGAGTGAGAGAGGTTA+AGG - chr8_2:52008476-52008495 Msa1254080:CDS 50.0%
! TGCAGAGAAAGCTTTGTGCC+AGG - chr8_2:52008503-52008522 Msa1254080:CDS 50.0%
! GCAGAGAAAGCTTTGTGCCA+GGG - chr8_2:52008504-52008523 Msa1254080:CDS 50.0%
GCACAAGACTACCGCAAACG+TGG - chr8_2:52007121-52007140 Msa1254080:CDS 55.0%
GTGGTCCTGCTATCAAGTCC+AGG - chr8_2:52007140-52007159 Msa1254080:CDS 55.0%
! CTAGGCCTGGACTTGATAGC+AGG + chr8_2:52007148-52007167 None:intergenic 55.0%
CTGCTATCAAGTCCAGGCCT+AGG - chr8_2:52007146-52007165 Msa1254080:CDS 55.0%
TGATGGGGATGAGATGCCCT+AGG + chr8_2:52007166-52007185 None:intergenic 55.0%
GCGTTTGGCGAGTTCGATGA+TGG + chr8_2:52007183-52007202 None:intergenic 55.0%
CATCGAACTCGCCAAACGCT+TGG - chr8_2:52007184-52007203 Msa1254080:CDS 55.0%
!! GTGGTGGATCACCAAGCGTT+TGG + chr8_2:52007198-52007217 None:intergenic 55.0%
! GGGCGGATTTGATGGAAGGT+AGG + chr8_2:52007400-52007419 None:intergenic 55.0%
! GTGAGGGCGGATTTGATGGA+AGG + chr8_2:52007404-52007423 None:intergenic 55.0%
GAGGGGTAAGTTTGTGAGGG+CGG + chr8_2:52007417-52007436 None:intergenic 55.0%
GGAGGAGGGGTAAGTTTGTG+AGG + chr8_2:52007421-52007440 None:intergenic 55.0%
!! ATGAGTGCTGAAGGGAGGAG+GGG + chr8_2:52007434-52007453 None:intergenic 55.0%
!! CAATGAGTGCTGAAGGGAGG+AGG + chr8_2:52007436-52007455 None:intergenic 55.0%
! GGTCGAACCGGTTTACAACC+TGG + chr8_2:52007626-52007645 None:intergenic 55.0%
! GACGCTGCGTTTTTCACCAC+TGG - chr8_2:52008054-52008073 Msa1254080:CDS 55.0%
ATCCTCTGCTCCGCGTAAAG+CGG + chr8_2:52008306-52008325 None:intergenic 55.0%
TGGCATGGCGGTGAAGACTA+CGG - chr8_2:52008353-52008372 Msa1254080:CDS 55.0%
TGAAGACTACGGTGTCTCCG+AGG - chr8_2:52008364-52008383 Msa1254080:CDS 55.0%
GTCTCCGAGGAAGAATCAGC+TGG - chr8_2:52008377-52008396 Msa1254080:CDS 55.0%
CCGAGGAAGAATCAGCTGGT+AGG - chr8_2:52008381-52008400 Msa1254080:CDS 55.0%
GGAAGAATCAGCTGGTAGGG+AGG - chr8_2:52008385-52008404 Msa1254080:CDS 55.0%
CTCTCACTCTCTCCCTCACA+TGG + chr8_2:52008470-52008489 None:intergenic 55.0%
TGTGAGGGAGAGAGTGAGAG+AGG - chr8_2:52008470-52008489 Msa1254080:CDS 55.0%
! GAGAAAGCTTTGTGCCAGGG+TGG - chr8_2:52008507-52008526 Msa1254080:CDS 55.0%
GCACAAGACTACCGCAAACG+TGG - chr8_2:52007121-52007140 Msa1254080:CDS 55.0%
GTGGTCCTGCTATCAAGTCC+AGG - chr8_2:52007140-52007159 Msa1254080:CDS 55.0%
! CTAGGCCTGGACTTGATAGC+AGG + chr8_2:52007148-52007167 None:intergenic 55.0%
CTGCTATCAAGTCCAGGCCT+AGG - chr8_2:52007146-52007165 Msa1254080:CDS 55.0%
TGATGGGGATGAGATGCCCT+AGG + chr8_2:52007166-52007185 None:intergenic 55.0%
GCGTTTGGCGAGTTCGATGA+TGG + chr8_2:52007183-52007202 None:intergenic 55.0%
CATCGAACTCGCCAAACGCT+TGG - chr8_2:52007184-52007203 Msa1254080:CDS 55.0%
!! GTGGTGGATCACCAAGCGTT+TGG + chr8_2:52007198-52007217 None:intergenic 55.0%
! GGGCGGATTTGATGGAAGGT+AGG + chr8_2:52007400-52007419 None:intergenic 55.0%
! GTGAGGGCGGATTTGATGGA+AGG + chr8_2:52007404-52007423 None:intergenic 55.0%
GAGGGGTAAGTTTGTGAGGG+CGG + chr8_2:52007417-52007436 None:intergenic 55.0%
GGAGGAGGGGTAAGTTTGTG+AGG + chr8_2:52007421-52007440 None:intergenic 55.0%
!! ATGAGTGCTGAAGGGAGGAG+GGG + chr8_2:52007434-52007453 None:intergenic 55.0%
!! CAATGAGTGCTGAAGGGAGG+AGG + chr8_2:52007436-52007455 None:intergenic 55.0%
! GGTCGAACCGGTTTACAACC+TGG + chr8_2:52007626-52007645 None:intergenic 55.0%
! GACGCTGCGTTTTTCACCAC+TGG - chr8_2:52008054-52008073 Msa1254080:CDS 55.0%
ATCCTCTGCTCCGCGTAAAG+CGG + chr8_2:52008306-52008325 None:intergenic 55.0%
TGGCATGGCGGTGAAGACTA+CGG - chr8_2:52008353-52008372 Msa1254080:CDS 55.0%
TGAAGACTACGGTGTCTCCG+AGG - chr8_2:52008364-52008383 Msa1254080:CDS 55.0%
GTCTCCGAGGAAGAATCAGC+TGG - chr8_2:52008377-52008396 Msa1254080:CDS 55.0%
CCGAGGAAGAATCAGCTGGT+AGG - chr8_2:52008381-52008400 Msa1254080:CDS 55.0%
GGAAGAATCAGCTGGTAGGG+AGG - chr8_2:52008385-52008404 Msa1254080:CDS 55.0%
CTCTCACTCTCTCCCTCACA+TGG + chr8_2:52008470-52008489 None:intergenic 55.0%
TGTGAGGGAGAGAGTGAGAG+AGG - chr8_2:52008470-52008489 Msa1254080:CDS 55.0%
! GAGAAAGCTTTGTGCCAGGG+TGG - chr8_2:52008507-52008526 Msa1254080:CDS 55.0%
AGGTTTGGGAAGTGACGGCG+AGG + chr8_2:52007238-52007257 None:intergenic 60.0%
CATTGTGACAGAGAGGCGGG+TGG + chr8_2:52007369-52007388 None:intergenic 60.0%
ACGTGCGTCCACAGAAGCTG+TGG - chr8_2:52008032-52008051 Msa1254080:CDS 60.0%
! GGAAGCAGTGGTGACGCGTT+TGG - chr8_2:52008075-52008094 Msa1254080:CDS 60.0%
CGCGGAGCAGAGGATGAATG+CGG - chr8_2:52008311-52008330 Msa1254080:CDS 60.0%
GAGGATGAATGCGGCGTTGC+TGG - chr8_2:52008320-52008339 Msa1254080:CDS 60.0%
GATGAATGCGGCGTTGCTGG+TGG - chr8_2:52008323-52008342 Msa1254080:CDS 60.0%
AGGTTTGGGAAGTGACGGCG+AGG + chr8_2:52007238-52007257 None:intergenic 60.0%
CATTGTGACAGAGAGGCGGG+TGG + chr8_2:52007369-52007388 None:intergenic 60.0%
ACGTGCGTCCACAGAAGCTG+TGG - chr8_2:52008032-52008051 Msa1254080:CDS 60.0%
! GGAAGCAGTGGTGACGCGTT+TGG - chr8_2:52008075-52008094 Msa1254080:CDS 60.0%
CGCGGAGCAGAGGATGAATG+CGG - chr8_2:52008311-52008330 Msa1254080:CDS 60.0%
GAGGATGAATGCGGCGTTGC+TGG - chr8_2:52008320-52008339 Msa1254080:CDS 60.0%
GATGAATGCGGCGTTGCTGG+TGG - chr8_2:52008323-52008342 Msa1254080:CDS 60.0%
GGGATGAGATGCCCTAGGCC+TGG + chr8_2:52007161-52007180 None:intergenic 65.0%
GACAGAGAGGCGGGTGGAGT+CGG + chr8_2:52007363-52007382 None:intergenic 65.0%
CGCAGCGTCCACAGCTTCTG+TGG + chr8_2:52008043-52008062 None:intergenic 65.0%
CGCGTCACCACTGCTTCCAG+TGG + chr8_2:52008073-52008092 None:intergenic 65.0%
GAATGCGGCGTTGCTGGTGG+AGG - chr8_2:52008326-52008345 Msa1254080:CDS 65.0%
GCGTTGCTGGTGGAGGAGCT+TGG - chr8_2:52008333-52008352 Msa1254080:CDS 65.0%
GCTGGTGGAGGAGCTTGGCA+TGG - chr8_2:52008338-52008357 Msa1254080:CDS 65.0%
GGTGGAGGAGCTTGGCATGG+CGG - chr8_2:52008341-52008360 Msa1254080:CDS 65.0%
GGGATGAGATGCCCTAGGCC+TGG + chr8_2:52007161-52007180 None:intergenic 65.0%
GACAGAGAGGCGGGTGGAGT+CGG + chr8_2:52007363-52007382 None:intergenic 65.0%
CGCAGCGTCCACAGCTTCTG+TGG + chr8_2:52008043-52008062 None:intergenic 65.0%
CGCGTCACCACTGCTTCCAG+TGG + chr8_2:52008073-52008092 None:intergenic 65.0%
GAATGCGGCGTTGCTGGTGG+AGG - chr8_2:52008326-52008345 Msa1254080:CDS 65.0%
GCGTTGCTGGTGGAGGAGCT+TGG - chr8_2:52008333-52008352 Msa1254080:CDS 65.0%
GCTGGTGGAGGAGCTTGGCA+TGG - chr8_2:52008338-52008357 Msa1254080:CDS 65.0%
GGTGGAGGAGCTTGGCATGG+CGG - chr8_2:52008341-52008360 Msa1254080:CDS 65.0%
!! TGGAGTCGGTGGCGGAGACG+GGG + chr8_2:52007349-52007368 None:intergenic 70.0%
!! GTGGAGTCGGTGGCGGAGAC+GGG + chr8_2:52007350-52007369 None:intergenic 70.0%
!! GGTGGAGTCGGTGGCGGAGA+CGG + chr8_2:52007351-52007370 None:intergenic 70.0%
AGAGAGGCGGGTGGAGTCGG+TGG + chr8_2:52007360-52007379 None:intergenic 70.0%
! GGCCGCTTTACGCGGAGCAG+AGG - chr8_2:52008301-52008320 Msa1254080:CDS 70.0%
!! TGGAGTCGGTGGCGGAGACG+GGG + chr8_2:52007349-52007368 None:intergenic 70.0%
!! GTGGAGTCGGTGGCGGAGAC+GGG + chr8_2:52007350-52007369 None:intergenic 70.0%
!! GGTGGAGTCGGTGGCGGAGA+CGG + chr8_2:52007351-52007370 None:intergenic 70.0%
AGAGAGGCGGGTGGAGTCGG+TGG + chr8_2:52007360-52007379 None:intergenic 70.0%
! GGCCGCTTTACGCGGAGCAG+AGG - chr8_2:52008301-52008320 Msa1254080:CDS 70.0%
!! GGTGGCGGAGACGGGGAGGA+GGG + chr8_2:52007342-52007361 None:intergenic 75.0%
!! AGTCGGTGGCGGAGACGGGG+AGG + chr8_2:52007346-52007365 None:intergenic 75.0%
GAGGCGGGTGGAGTCGGTGG+CGG + chr8_2:52007357-52007376 None:intergenic 75.0%
!! GGTGGCGGAGACGGGGAGGA+GGG + chr8_2:52007342-52007361 None:intergenic 75.0%
!! AGTCGGTGGCGGAGACGGGG+AGG + chr8_2:52007346-52007365 None:intergenic 75.0%
GAGGCGGGTGGAGTCGGTGG+CGG + chr8_2:52007357-52007376 None:intergenic 75.0%
! GGCGGAGACGGGGAGGAGGG+AGG + chr8_2:52007339-52007358 None:intergenic 80.0%
!!! CGGTGGCGGAGACGGGGAGG+AGG + chr8_2:52007343-52007362 None:intergenic 80.0%
! GGCGGAGACGGGGAGGAGGG+AGG + chr8_2:52007339-52007358 None:intergenic 80.0%
!!! CGGTGGCGGAGACGGGGAGG+AGG + chr8_2:52007343-52007362 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 52007113 52008596 52007113 ID=Msa1254080;Name=Msa1254080
chr8_2 mRNA 52007113 52008596 52007113 ID=Msa1254080-mRNA-1;Parent=Msa1254080;Name=Msa1254080-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|1|1|2|0|437
chr8_2 exon 52007834 52008596 52007834 ID=Msa1254080-mRNA-1:exon:15954;Parent=Msa1254080-mRNA-1
chr8_2 exon 52007113 52007663 52007113 ID=Msa1254080-mRNA-1:exon:15953;Parent=Msa1254080-mRNA-1
chr8_2 CDS 52007834 52008596 52007834 ID=Msa1254080-mRNA-1:cds;Parent=Msa1254080-mRNA-1
chr8_2 CDS 52007113 52007663 52007113 ID=Msa1254080-mRNA-1:cds;Parent=Msa1254080-mRNA-1
Gene Sequence

>Msa1254080

ATGAATTCGCACAAGACTACCGCAAACGTGGTCCTGCTATCAAGTCCAGGCCTAGGGCATCTCATCCCCATCATCGAACTCGCCAAACGCTTGGTGATCCACCACAATTTCAAACTCACAATCCTCGCCGTCACTTCCCAAACCTCACAAGCAGAATCTCAAATCCTGAAATCAGCCACAAATTCCTCCCTCTACACCATCATCCAAATCCCATCACAAATTTCCTCCCTCCTCCCCGTCTCCGCCACCGACTCCACCCGCCTCTCTGTCACAATGTGTCACTCCCTACCTTCCATCAAATCCGCCCTCACAAACTTACCCCTCCTCCCTTCAGCACTCATTGTTGATATATTCGGAATAGAGGCTTTAACTTTAGCACAAGAGCTCAACATTCCAAAATTCGTCTATGTAGCTTCACAAGCTTGGTTTTTTTCCCTGTTCGTGTATTCTCCTCTTTTGGACAAACAAATCCAAGGACAATACGTTGAGCAAAAAGATCCGTTGAAAATCCCAGGTTGTAAACCGGTTCGACCAGTAGATTTAGTTGATCCCATGCTGAACCGAAACGACTTGAAGTATAAAGAGTATCTAAACAGAGCCAATAACCTCTCCAAAAGTGATGCCATTTTAGTAAACACGTGGGATGAAGTTCAACATAGAGAGCTTAAAGCACTTAATGATGAAGATGGAGAATTATCAAGTTTATTGAAAGTTCCTGTATTTGCAGTTGGCCCTTTGGTTAGACAAACCGAGTCAGAAATAGAAGCTGTGGACGCTGCGTTTTTCACCACTGGAAGCAGTGGTGACGCGTTTGGTGATGAACTTGATGATCAGATAGGTAAGCATTTACCTGAGGGGTTTGTAGAGAGAATAAAGAATAAGAATGTGGGTTTGTTAGTTCATGAATGGGCACCACAAGTAACTGTTTTGAAACATCCTTCGATTGGTGGTTTTGTTTCACACTGTGGATGGGGTTCTGTGCTTGAGAGTATAACCAACGGTGTGCCTATTATTGCTTGGCCGCTTTACGCGGAGCAGAGGATGAATGCGGCGTTGCTGGTGGAGGAGCTTGGCATGGCGGTGAAGACTACGGTGTCTCCGAGGAAGAATCAGCTGGTAGGGAGGGAAGAGATAGCAAGTTTGGTGAGAAAGGTTATTTTGGTGGACCAAAATGGGAAGAGTAACCATGTGAGGGAGAGAGTGAGAGAGGTTAAGGTTAGTGCAGAGAAAGCTTTGTGCCAGGGTGGTTCGTCTTATAATGCATTGTCTCATGTTGCAAGAATAATAAACAAACAAGATTTTGTTTGTGTTTAA
Protein sequence

>Msa1254080

MNSHKTTANVVLLSSPGLGHLIPIIELAKRLVIHHNFKLTILAVTSQTSQAESQILKSATNSSLYTIIQIPSQISSLLPVSATDSTRLSVTMCHSLPSIKSALTNLPLLPSALIVDIFGIEALTLAQELNIPKFVYVASQAWFFSLFVYSPLLDKQIQGQYVEQKDPLKIPGCKPVRPVDLVDPMLNRNDLKYKEYLNRANNLSKSDAILVNTWDEVQHRELKALNDEDGELSSLLKVPVFAVGPLVRQTESEIEAVDAAFFTTGSSGDAFGDELDDQIGKHLPEGFVERIKNKNVGLLVHEWAPQVTVLKHPSIGGFVSHCGWGSVLESITNGVPIIAWPLYAEQRMNAALLVEELGMAVKTTVSPRKNQLVGREEIASLVRKVILVDQNGKSNHVRERVREVKVSAEKALCQGGSSYNALSHVARIINKQDFVCV*