Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254520 | AFK37964.1 | 93.333 | 105 | 7 | 0 | 1 | 105 | 1 | 105 | 4.89e-60 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254520 | sp|P42653|1433A_VICFA | 72.535 | 142 | 31 | 2 | 1 | 135 | 1 | 141 | 2.58e-61 | 195 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254520 | I3SCH2 | 93.333 | 105 | 7 | 0 | 1 | 105 | 1 | 105 | 2.33e-60 | 199 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1201550 | Msa1254520 | 0.800201 | 1.610551e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254520 | MtrunA17_Chr5g0426551 | 93.333 | 105 | 7 | 0 | 1 | 105 | 1 | 105 | 4.59e-64 | 199 |
| Msa1254520 | MtrunA17_Chr3g0132301 | 60.241 | 166 | 50 | 3 | 1 | 159 | 1 | 157 | 3.51e-54 | 174 |
| Msa1254520 | MtrunA17_Chr3g0133161 | 65.657 | 99 | 33 | 1 | 8 | 105 | 11 | 109 | 3.48e-41 | 140 |
| Msa1254520 | MtrunA17_Chr2g0325591 | 67.290 | 107 | 32 | 2 | 1 | 107 | 1 | 104 | 5.14e-39 | 135 |
| Msa1254520 | MtrunA17_Chr2g0283791 | 64.423 | 104 | 35 | 1 | 6 | 109 | 3 | 104 | 1.12e-37 | 132 |
| Msa1254520 | MtrunA17_Chr2g0316011 | 61.468 | 109 | 40 | 1 | 1 | 109 | 1 | 107 | 1.64e-37 | 131 |
| Msa1254520 | MtrunA17_Chr8g0379011 | 69.072 | 97 | 28 | 1 | 8 | 104 | 7 | 101 | 4.42e-36 | 127 |
| Msa1254520 | MtrunA17_Chr5g0418971 | 65.347 | 101 | 33 | 1 | 3 | 103 | 2 | 100 | 3.92e-34 | 122 |
| Msa1254520 | MtrunA17_Chr4g0043141 | 71.429 | 63 | 18 | 0 | 42 | 104 | 14 | 76 | 5.06e-23 | 93.2 |
| Msa1254520 | MtrunA17_Chr3g0082111 | 42.222 | 135 | 69 | 5 | 8 | 135 | 41 | 173 | 8.54e-23 | 93.6 |
| Msa1254520 | MtrunA17_Chr1g0164601 | 42.222 | 135 | 69 | 5 | 8 | 135 | 11 | 143 | 1.63e-22 | 92.0 |
| Msa1254520 | MtrunA17_Chr2g0286641 | 86.047 | 43 | 6 | 0 | 162 | 204 | 569 | 611 | 5.96e-17 | 79.3 |
| Msa1254520 | MtrunA17_Chr3g0124971 | 50.633 | 79 | 37 | 2 | 129 | 206 | 104 | 181 | 2.04e-15 | 74.7 |
| Msa1254520 | MtrunA17_Chr4g0066611 | 72.093 | 43 | 12 | 0 | 162 | 204 | 571 | 613 | 2.38e-14 | 71.6 |
| Msa1254520 | MtrunA17_Chr3g0124991 | 68.421 | 38 | 12 | 0 | 129 | 166 | 97 | 134 | 4.71e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1254520 | AT4G09000.1 | 79.439 | 107 | 20 | 1 | 1 | 105 | 1 | 107 | 1.73e-52 | 170 |
| Msa1254520 | AT1G78300.1 | 82.000 | 100 | 18 | 0 | 6 | 105 | 3 | 102 | 1.02e-51 | 168 |
| Msa1254520 | AT4G09000.2 | 79.439 | 107 | 20 | 1 | 1 | 105 | 1 | 107 | 1.36e-51 | 169 |
| Msa1254520 | AT1G35160.1 | 78.505 | 107 | 20 | 1 | 1 | 104 | 1 | 107 | 1.62e-51 | 168 |
| Msa1254520 | AT1G35160.2 | 78.505 | 107 | 20 | 1 | 1 | 104 | 1 | 107 | 3.56e-51 | 168 |
| Msa1254520 | AT3G02520.1 | 76.190 | 105 | 23 | 1 | 6 | 110 | 3 | 105 | 1.32e-48 | 160 |
| Msa1254520 | AT3G02520.2 | 76.190 | 105 | 23 | 1 | 6 | 110 | 3 | 105 | 1.32e-48 | 160 |
| Msa1254520 | AT5G38480.1 | 76.190 | 105 | 23 | 1 | 6 | 110 | 2 | 104 | 3.55e-48 | 159 |
| Msa1254520 | AT5G38480.3 | 76.190 | 105 | 23 | 1 | 6 | 110 | 2 | 104 | 3.76e-48 | 159 |
| Msa1254520 | AT5G38480.2 | 76.190 | 105 | 23 | 1 | 6 | 110 | 2 | 104 | 3.76e-48 | 159 |
| Msa1254520 | AT5G10450.1 | 74.490 | 98 | 24 | 1 | 8 | 104 | 7 | 104 | 1.19e-45 | 152 |
| Msa1254520 | AT5G10450.2 | 74.490 | 98 | 24 | 1 | 8 | 104 | 7 | 104 | 1.37e-45 | 152 |
| Msa1254520 | AT5G10450.3 | 74.490 | 98 | 24 | 1 | 8 | 104 | 7 | 104 | 1.48e-45 | 152 |
| Msa1254520 | AT5G10450.4 | 74.490 | 98 | 24 | 1 | 8 | 104 | 7 | 104 | 3.09e-45 | 152 |
| Msa1254520 | AT5G65430.2 | 71.429 | 105 | 28 | 2 | 1 | 104 | 1 | 104 | 6.03e-44 | 148 |
| Msa1254520 | AT5G65430.1 | 71.429 | 105 | 28 | 2 | 1 | 104 | 1 | 104 | 7.17e-44 | 147 |
| Msa1254520 | AT5G65430.3 | 71.429 | 105 | 28 | 2 | 1 | 104 | 1 | 104 | 9.99e-44 | 147 |
| Msa1254520 | AT5G16050.1 | 74.074 | 108 | 26 | 1 | 3 | 110 | 2 | 107 | 1.31e-40 | 140 |
| Msa1254520 | AT5G16050.2 | 74.074 | 108 | 26 | 1 | 3 | 110 | 2 | 107 | 1.31e-40 | 140 |
| Msa1254520 | AT1G26480.1 | 71.875 | 96 | 25 | 2 | 8 | 103 | 10 | 103 | 1.47e-37 | 132 |
| Msa1254520 | AT1G34760.2 | 64.286 | 98 | 33 | 1 | 6 | 103 | 3 | 98 | 9.55e-35 | 124 |
| Msa1254520 | AT1G34760.1 | 64.286 | 98 | 33 | 1 | 6 | 103 | 3 | 98 | 1.14e-34 | 124 |
| Msa1254520 | AT1G22300.2 | 63.918 | 97 | 33 | 1 | 8 | 104 | 5 | 99 | 1.23e-34 | 124 |
| Msa1254520 | AT1G22300.1 | 63.918 | 97 | 33 | 1 | 8 | 104 | 5 | 99 | 1.25e-34 | 124 |
| Msa1254520 | AT1G22300.3 | 63.918 | 97 | 33 | 1 | 8 | 104 | 5 | 99 | 1.66e-34 | 124 |
| Msa1254520 | AT2G42590.1 | 65.625 | 96 | 31 | 1 | 8 | 103 | 7 | 100 | 3.55e-33 | 120 |
| Msa1254520 | AT2G42590.2 | 65.625 | 96 | 31 | 1 | 8 | 103 | 7 | 100 | 3.86e-33 | 120 |
| Msa1254520 | AT2G42590.3 | 65.625 | 96 | 31 | 1 | 8 | 103 | 7 | 100 | 4.24e-33 | 120 |
| Msa1254520 | AT1G22290.1 | 47.959 | 98 | 43 | 2 | 12 | 104 | 9 | 103 | 3.63e-21 | 87.4 |
| Msa1254520 | AT1G22290.2 | 47.959 | 98 | 43 | 2 | 12 | 104 | 9 | 103 | 5.04e-21 | 87.8 |
| Msa1254520 | AT1G78220.1 | 43.434 | 99 | 54 | 1 | 6 | 104 | 3 | 99 | 1.82e-19 | 84.3 |
Find 57 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTCAGCGTTACAGATAT+TGG | 0.238011 | 8_2:+52632135 | None:intergenic |
| CTAGCTATGCAAATACTTAC+AGG | 0.294928 | 8_2:+52627948 | None:intergenic |
| TTCGTAACGTTTGGCTTGTT+CGG | 0.304173 | 8_2:+52632381 | None:intergenic |
| CGAAGAGATGGTCGATTTCA+TGG | 0.318079 | 8_2:-52632362 | Msa1254520:CDS |
| GACCATCTCTTCGTAACGTT+TGG | 0.371137 | 8_2:+52632372 | None:intergenic |
| AATAACAACTGATGAAGTTT+CGG | 0.382968 | 8_2:+52628193 | None:intergenic |
| TAGAGAAATAACATGGAGTT+TGG | 0.390945 | 8_2:-52627928 | Msa1254520:three_prime_UTR |
| TTTAGCATGAGATTACTTCT+TGG | 0.392715 | 8_2:-52628076 | Msa1254520:three_prime_UTR |
| AAAGAAATCAGTACCTCTTC+CGG | 0.396980 | 8_2:+52629717 | None:intergenic |
| ATGGATATTAGCAGAGCTTT+CGG | 0.425234 | 8_2:-52629757 | Msa1254520:CDS |
| GGTTTGTGACCGGATGTCTA+TGG | 0.448159 | 8_2:-52629776 | Msa1254520:CDS |
| AGCTTTGACATCTATATTGT+GGG | 0.448584 | 8_2:-52630089 | Msa1254520:CDS |
| ATACTCCGCTTTGCAGAGTT+CGG | 0.457488 | 8_2:+52629803 | None:intergenic |
| TTGATCTTAGCACAAATCAA+TGG | 0.462328 | 8_2:-52628107 | Msa1254520:three_prime_UTR |
| CAGCTGTTCCAAAACCGAAA+AGG | 0.470322 | 8_2:+52628721 | None:intergenic |
| TAGCTTTGACATCTATATTG+TGG | 0.480121 | 8_2:-52630090 | Msa1254520:CDS |
| ACATATAGTATGTAGCTTGA+AGG | 0.481685 | 8_2:+52628147 | None:intergenic |
| AAATGTTAACAGATAGGAAA+AGG | 0.484236 | 8_2:-52628774 | Msa1254520:intron |
| TGCTAATATCCATAGACATC+CGG | 0.487696 | 8_2:+52629767 | None:intergenic |
| TCGGAGCACAACGTGCTTCG+TGG | 0.488256 | 8_2:-52632258 | Msa1254520:CDS |
| GGATATAATATTGATCCCTA+TGG | 0.491243 | 8_2:-52630068 | Msa1254520:intron |
| ACGTGAAGAGTTCGTCTACA+TGG | 0.496790 | 8_2:-52632413 | Msa1254520:CDS |
| GCAGGATCCTCAATTATGCT+TGG | 0.498328 | 8_2:-52630115 | Msa1254520:intron |
| AGCTGTTCCAAAACCGAAAA+GGG | 0.506622 | 8_2:+52628722 | None:intergenic |
| GGTGAGTTCTTCGCTTTCGA+CGG | 0.507397 | 8_2:+52632324 | None:intergenic |
| ACTTTCTTCCTTCTGTTCGA+TGG | 0.507731 | 8_2:+52632222 | None:intergenic |
| GCCTCCATGTTGCAGCATCA+TGG | 0.508520 | 8_2:-52628678 | Msa1254520:CDS |
| AAGTTTAAGTATTAAAGTAT+CGG | 0.523951 | 8_2:-52627843 | None:intergenic |
| TGGTGATGGTGCGGTTGCCA+TGG | 0.531049 | 8_2:+52632435 | None:intergenic |
| AGTTTCTCAAGGTTTATCTA+CGG | 0.536455 | 8_2:+52628217 | None:intergenic |
| AAAGGGCTACTCTTTCCCCT+TGG | 0.539127 | 8_2:+52628739 | None:intergenic |
| AGCTGCAGATACACCGGAAG+AGG | 0.539823 | 8_2:-52629730 | Msa1254520:intron |
| CATCTCTTCCATCGAACAGA+AGG | 0.549390 | 8_2:-52632230 | Msa1254520:CDS |
| AGCTATGCCAAGCATAATTG+AGG | 0.553176 | 8_2:+52630108 | None:intergenic |
| TTAAAAGAAGCACATGACAT+TGG | 0.559760 | 8_2:-52628247 | Msa1254520:CDS |
| TCTGCAAAGCGGAGTATCCA+TGG | 0.565751 | 8_2:-52629797 | Msa1254520:CDS |
| GAGTATCCATGGTTTGTGAC+CGG | 0.565764 | 8_2:-52629786 | Msa1254520:CDS |
| AAGGAAGAATACTGATCCAA+GGG | 0.567645 | 8_2:-52628755 | Msa1254520:CDS |
| GAAGTTTCGGAAGTTTCTCA+AGG | 0.575667 | 8_2:+52628206 | None:intergenic |
| CAAGCCATGATGCTGCAACA+TGG | 0.577794 | 8_2:+52628674 | None:intergenic |
| ACGAACTCTTCACGTGGTGA+TGG | 0.582232 | 8_2:+52632421 | None:intergenic |
| AAAGGAAGAATACTGATCCA+AGG | 0.584135 | 8_2:-52628756 | Msa1254520:CDS |
| AGACATCCGGTCACAAACCA+TGG | 0.592177 | 8_2:+52629780 | None:intergenic |
| AGCCAAACGTTACGAAGAGA+TGG | 0.598787 | 8_2:-52632374 | Msa1254520:CDS |
| CTCTTCACGTGGTGATGGTG+CGG | 0.600571 | 8_2:+52632426 | None:intergenic |
| GAGTTCTTCGCTTTCGACGG+CGG | 0.614836 | 8_2:+52632327 | None:intergenic |
| GAACAGAAGGAAGAAAGTTG+TGG | 0.616160 | 8_2:-52632217 | Msa1254520:CDS |
| CCGCTTTGCAGAGTTCGGCA+AGG | 0.624173 | 8_2:+52629808 | None:intergenic |
| GGTCATAGCTGCAGATACAC+CGG | 0.626864 | 8_2:-52629736 | Msa1254520:CDS |
| AGTATGTAGCTTGAAGGCAA+AGG | 0.638885 | 8_2:+52628153 | None:intergenic |
| TTAGCACAAATCAATGGACA+TGG | 0.656205 | 8_2:-52628101 | Msa1254520:three_prime_UTR |
| GAGGAGGTTACGTTCTTCGA+CGG | 0.656962 | 8_2:+52632303 | None:intergenic |
| AGGAAGAATACTGATCCAAG+GGG | 0.672511 | 8_2:-52628754 | Msa1254520:CDS |
| CCTTGCCGAACTCTGCAAAG+CGG | 0.678058 | 8_2:-52629808 | Msa1254520:CDS |
| GCATAGCTAGAGAAATAACA+TGG | 0.684263 | 8_2:-52627935 | Msa1254520:three_prime_UTR |
| ATGTAGACGAACTCTTCACG+TGG | 0.740530 | 8_2:+52632415 | None:intergenic |
| GCCATGATGCTGCAACATGG+AGG | 0.751883 | 8_2:+52628677 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTATATTAATAGAAAAATA+CGG | + | chr8_2:52628394-52628413 | None:intergenic | 10.0% |
| !!! | TTTTTAATATTAAAAAAGTG+TGG | + | chr8_2:52628662-52628681 | None:intergenic | 10.0% |
| !!! | TTTAGATCTTTTAATTTTAT+GGG | + | chr8_2:52629149-52629168 | None:intergenic | 10.0% |
| !!! | ATTTAGATCTTTTAATTTTA+TGG | + | chr8_2:52629150-52629169 | None:intergenic | 10.0% |
| !!! | TATATGAAATATTTATTTTC+AGG | - | chr8_2:52629996-52630015 | Msa1254520:intron | 10.0% |
| !!! | AATTTTTTATTTTTTTTTGC+AGG | - | chr8_2:52630144-52630163 | Msa1254520:intron | 10.0% |
| !!! | TATTGTTTAACTTAATTTAA+AGG | + | chr8_2:52630627-52630646 | None:intergenic | 10.0% |
| !!! | AATAACTTTTTATTGATAAA+TGG | - | chr8_2:52631146-52631165 | Msa1254520:intron | 10.0% |
| !!! | AAAATTGCATATTTTCAAAT+GGG | + | chr8_2:52628354-52628373 | None:intergenic | 15.0% |
| !! | TAGTATAGTAGTATATAATA+GGG | + | chr8_2:52628789-52628808 | None:intergenic | 15.0% |
| !! | ATAGTATAGTAGTATATAAT+AGG | + | chr8_2:52628790-52628809 | None:intergenic | 15.0% |
| !!! | AATTGATGACTTTAAAAAAA+AGG | - | chr8_2:52628966-52628985 | Msa1254520:intron | 15.0% |
| !! | CAATTATTTGACAAAAAAAA+TGG | + | chr8_2:52629272-52629291 | None:intergenic | 15.0% |
| !!! | TTTTTTGTCAAATAATTGAT+TGG | - | chr8_2:52629274-52629293 | Msa1254520:intron | 15.0% |
| !! | TATTATAAATGTAAGTTTGA+GGG | + | chr8_2:52629347-52629366 | None:intergenic | 15.0% |
| !!! | AAATATTTATTTTCAGGTAA+AGG | - | chr8_2:52630002-52630021 | Msa1254520:intron | 15.0% |
| !!! | TTTTAATATTACAAAAAGTG+AGG | - | chr8_2:52630026-52630045 | Msa1254520:intron | 15.0% |
| !! | TGAATATAAAGATAAAAGTA+AGG | + | chr8_2:52630601-52630620 | None:intergenic | 15.0% |
| !!! | AAATACAATTCACTTTTATA+TGG | - | chr8_2:52630647-52630666 | Msa1254520:intron | 15.0% |
| !!! | ATTTCATGGATAAATTTTTT+TGG | - | chr8_2:52631642-52631661 | Msa1254520:intron | 15.0% |
| !! | TAAAATATTTCTTAGATTTC+TGG | + | chr8_2:52631673-52631692 | None:intergenic | 15.0% |
| !!! | AAATCTAAGAAATATTTTAG+AGG | - | chr8_2:52631674-52631693 | Msa1254520:intron | 15.0% |
| !!! | AATCTAAGAAATATTTTAGA+GGG | - | chr8_2:52631675-52631694 | Msa1254520:intron | 15.0% |
| !! | AATCAAATATTGGTATATTT+AGG | - | chr8_2:52631703-52631722 | Msa1254520:intron | 15.0% |
| !! | ATCAAATATTGGTATATTTA+GGG | - | chr8_2:52631704-52631723 | Msa1254520:intron | 15.0% |
| !!! | ATTTTAAACCAGATTAAAAC+GGG | + | chr8_2:52628217-52628236 | None:intergenic | 20.0% |
| !!! | CATTTTAAACCAGATTAAAA+CGG | + | chr8_2:52628218-52628237 | None:intergenic | 20.0% |
| !!! | CAAAATTGCATATTTTCAAA+TGG | + | chr8_2:52628355-52628374 | None:intergenic | 20.0% |
| !! | TTAAGCTCAAAATTATACAT+TGG | - | chr8_2:52628515-52628534 | Msa1254520:intron | 20.0% |
| !! | AGTATAGTAGTATATAATAG+GGG | + | chr8_2:52628788-52628807 | None:intergenic | 20.0% |
| !! | GTATTATAAATGTAAGTTTG+AGG | + | chr8_2:52629348-52629367 | None:intergenic | 20.0% |
| !!! | ACCAATTTTGATATAGAATA+AGG | - | chr8_2:52629868-52629887 | Msa1254520:intron | 20.0% |
| !!! | CCAATTTTGATATAGAATAA+GGG | - | chr8_2:52629869-52629888 | Msa1254520:intron | 20.0% |
| !! | CATAAAATATCAAATTCTGA+TGG | - | chr8_2:52630307-52630326 | Msa1254520:intron | 20.0% |
| !!! | ATGTTTTAAACAAAAGGTTT+AGG | + | chr8_2:52630351-52630370 | None:intergenic | 20.0% |
| !!! | AAACCTTTTGTTTAAAACAT+TGG | - | chr8_2:52630351-52630370 | Msa1254520:intron | 20.0% |
| !! | CTGATCATGTATATATAAAT+TGG | - | chr8_2:52630764-52630783 | Msa1254520:intron | 20.0% |
| !! | ATTTGCGCTAAAAAATATTT+GGG | - | chr8_2:52630941-52630960 | Msa1254520:intron | 20.0% |
| !!! | GTTTTATAATATTGTTACCA+TGG | + | chr8_2:52631024-52631043 | None:intergenic | 20.0% |
| !! | TCATATTACAAAAATACTGT+TGG | - | chr8_2:52631200-52631219 | Msa1254520:intron | 20.0% |
| !! | AAACAATTATCAAATTACAC+TGG | - | chr8_2:52631279-52631298 | Msa1254520:intron | 20.0% |
| !!! | TGAAGTATTTGTGTTAAAAA+TGG | + | chr8_2:52631428-52631447 | None:intergenic | 20.0% |
| !! | ACATTAAATGTTAATTTCGT+GGG | + | chr8_2:52631479-52631498 | None:intergenic | 20.0% |
| !! | AACATTAAATGTTAATTTCG+TGG | + | chr8_2:52631480-52631499 | None:intergenic | 20.0% |
| !! | ACTTACAATTATTTGTACTT+TGG | - | chr8_2:52631810-52631829 | Msa1254520:intron | 20.0% |
| !! | CTTACAATTATTTGTACTTT+GGG | - | chr8_2:52631811-52631830 | Msa1254520:intron | 20.0% |
| !! | TAATCTGGTTTAAAATGAAC+TGG | - | chr8_2:52628221-52628240 | Msa1254520:exon | 25.0% |
| !! | AGACATAACTTTATTTCAAG+TGG | - | chr8_2:52628732-52628751 | Msa1254520:CDS | 25.0% |
| !! | GACATAACTTTATTTCAAGT+GGG | - | chr8_2:52628733-52628752 | Msa1254520:CDS | 25.0% |
| !! | ACATAACTTTATTTCAAGTG+GGG | - | chr8_2:52628734-52628753 | Msa1254520:CDS | 25.0% |
| ! | GAAAGTTCAAAATTAATGCA+TGG | - | chr8_2:52629032-52629051 | Msa1254520:intron | 25.0% |
| ! | TAATATGTTACATGTGAAGA+AGG | - | chr8_2:52629067-52629086 | Msa1254520:intron | 25.0% |
| !!! | TCATTATCAAAAGTGTTAAG+TGG | + | chr8_2:52629102-52629121 | None:intergenic | 25.0% |
| ! | TAATGATGCAACTAAAGTAA+AGG | - | chr8_2:52629116-52629135 | Msa1254520:intron | 25.0% |
| ! | TACCTATTTATTCAGCTTAA+AGG | + | chr8_2:52629311-52629330 | None:intergenic | 25.0% |
| ! | TAATGTGTTCATACATTAGA+GGG | - | chr8_2:52629815-52629834 | Msa1254520:CDS | 25.0% |
| ! | CCCTTATTCTATATCAAAAT+TGG | + | chr8_2:52629872-52629891 | None:intergenic | 25.0% |
| ! | TTACTTATTTCACGTTAATG+TGG | + | chr8_2:52629896-52629915 | None:intergenic | 25.0% |
| ! | TCATGCATAGTAAAATCTTA+TGG | + | chr8_2:52629926-52629945 | None:intergenic | 25.0% |
| !!! | TCACCAATGTTTTAAACAAA+AGG | + | chr8_2:52630357-52630376 | None:intergenic | 25.0% |
| !!! | AAAAAAAAGTATCACACTGA+TGG | + | chr8_2:52630402-52630421 | None:intergenic | 25.0% |
| !!! | ATTTGTTGTTTGAATTTTGC+AGG | - | chr8_2:52630440-52630459 | Msa1254520:intron | 25.0% |
| ! | ATGTTACCTAAAATTGATTG+TGG | - | chr8_2:52630902-52630921 | Msa1254520:intron | 25.0% |
| !! | TAACTACCACAATCAATTTT+AGG | + | chr8_2:52630911-52630930 | None:intergenic | 25.0% |
| ! | AAATTGATTGTGGTAGTTAT+TGG | - | chr8_2:52630912-52630931 | Msa1254520:intron | 25.0% |
| ! | AATTGATTGTGGTAGTTATT+GGG | - | chr8_2:52630913-52630932 | Msa1254520:intron | 25.0% |
| ! | CATTTGCGCTAAAAAATATT+TGG | - | chr8_2:52630940-52630959 | Msa1254520:intron | 25.0% |
| ! | TTTGCGCTAAAAAATATTTG+GGG | - | chr8_2:52630942-52630961 | Msa1254520:intron | 25.0% |
| ! | ATGGATACAAAACTTATCAT+TGG | - | chr8_2:52631165-52631184 | Msa1254520:intron | 25.0% |
| ! | TTGTTTAATTAAAGTGCGTA+AGG | + | chr8_2:52631265-52631284 | None:intergenic | 25.0% |
| ! | GTTATGAAATGTTAACAGAT+AGG | - | chr8_2:52631497-52631516 | Msa1254520:intron | 25.0% |
| ! | AAATGTTAACAGATAGGAAA+AGG | - | chr8_2:52631503-52631522 | Msa1254520:intron | 25.0% |
| !!! | TCATGGATAAATTTTTTTGG+AGG | - | chr8_2:52631645-52631664 | Msa1254520:intron | 25.0% |
| !!! | CATGGATAAATTTTTTTGGA+GGG | - | chr8_2:52631646-52631665 | Msa1254520:intron | 25.0% |
| !!! | ATCAATTTTAGTGTTCGTAA+TGG | - | chr8_2:52631864-52631883 | Msa1254520:intron | 25.0% |
| !!! | TCAATTTTAGTGTTCGTAAT+GGG | - | chr8_2:52631865-52631884 | Msa1254520:intron | 25.0% |
| ! | AATAACAACTGATGAAGTTT+CGG | + | chr8_2:52632087-52632106 | None:intergenic | 25.0% |
| ! | ATGTGTTTTCAGATCTGAAA+TGG | - | chr8_2:52628162-52628181 | Msa1254520:three_prime_UTR | 30.0% |
| !! | TGTGTTTTCAGATCTGAAAT+GGG | - | chr8_2:52628163-52628182 | Msa1254520:three_prime_UTR | 30.0% |
| ! | GTTCACCATATTTTCAGTTT+GGG | - | chr8_2:52628283-52628302 | Msa1254520:CDS | 30.0% |
| AAATACGGTCAAAGTAAGTT+AGG | + | chr8_2:52628379-52628398 | None:intergenic | 30.0% | |
| TGTGGTCTAACTTAAAATTG+AGG | + | chr8_2:52628644-52628663 | None:intergenic | 30.0% | |
| TCCAAACAAAACAAGTGAAT+TGG | - | chr8_2:52629175-52629194 | Msa1254520:intron | 30.0% | |
| CCAAACAAAACAAGTGAATT+GGG | - | chr8_2:52629176-52629195 | Msa1254520:intron | 30.0% | |
| !!! | AGTTTTTTGTCAAACGAGTT+GGG | + | chr8_2:52629242-52629261 | None:intergenic | 30.0% |
| CACCTTTAAGCTGAATAAAT+AGG | - | chr8_2:52629306-52629325 | Msa1254520:intron | 30.0% | |
| TGATGATAAAAATCCACAAG+AGG | + | chr8_2:52629702-52629721 | None:intergenic | 30.0% | |
| AGAATTAGAGACTATGATGT+TGG | + | chr8_2:52629769-52629788 | None:intergenic | 30.0% | |
| ! | TCTTTTTCTCTTCTCTTTTC+TGG | - | chr8_2:52629786-52629805 | Msa1254520:CDS | 30.0% |
| CTAATGTGTTCATACATTAG+AGG | - | chr8_2:52629814-52629833 | Msa1254520:CDS | 30.0% | |
| TTAGAGGGAATTAATGAATG+AGG | - | chr8_2:52629830-52629849 | Msa1254520:intron | 30.0% | |
| ! | AGATTTTACTATGCATGATC+TGG | - | chr8_2:52629928-52629947 | Msa1254520:intron | 30.0% |
| TAGTAGAAGACATCAAAGAA+GGG | + | chr8_2:52630104-52630123 | None:intergenic | 30.0% | |
| !! | TAGCTTTGACATCTATATTG+TGG | - | chr8_2:52630187-52630206 | Msa1254520:intron | 30.0% |
| ! | AGCTTTGACATCTATATTGT+GGG | - | chr8_2:52630188-52630207 | Msa1254520:intron | 30.0% |
| GGATATAATATTGATCCCTA+TGG | - | chr8_2:52630209-52630228 | Msa1254520:intron | 30.0% | |
| AATATCAAATTCTGATGGCA+TGG | - | chr8_2:52630312-52630331 | Msa1254520:intron | 30.0% | |
| !!! | TGTTATTTTCTCTTTCACCA+TGG | - | chr8_2:52631004-52631023 | Msa1254520:intron | 30.0% |
| ! | TGTAACATGGACTAATTTCA+TGG | - | chr8_2:52631628-52631647 | Msa1254520:intron | 30.0% |
| GAGGGACTAAAATCAAATAT+TGG | - | chr8_2:52631693-52631712 | Msa1254520:intron | 30.0% | |
| TATGTAAAACCCCCAATAAA+AGG | - | chr8_2:52631913-52631932 | Msa1254520:intron | 30.0% | |
| ! | TCAGTTTAGCACCTTTTATT+GGG | + | chr8_2:52631927-52631946 | None:intergenic | 30.0% |
| ! | TTCAGTTTAGCACCTTTTAT+TGG | + | chr8_2:52631928-52631947 | None:intergenic | 30.0% |
| !! | TAAAAGGTGCTAAACTGAAA+TGG | - | chr8_2:52631929-52631948 | Msa1254520:intron | 30.0% |
| ! | ATGTCATGTGCTTCTTTTAA+GGG | + | chr8_2:52632030-52632049 | None:intergenic | 30.0% |
| ! | AATGTCATGTGCTTCTTTTA+AGG | + | chr8_2:52632031-52632050 | None:intergenic | 30.0% |
| ! | TTAAAAGAAGCACATGACAT+TGG | - | chr8_2:52632030-52632049 | Msa1254520:intron | 30.0% |
| AGTTTCTCAAGGTTTATCTA+CGG | + | chr8_2:52632063-52632082 | None:intergenic | 30.0% | |
| ACATATAGTATGTAGCTTGA+AGG | + | chr8_2:52632133-52632152 | None:intergenic | 30.0% | |
| TTGATCTTAGCACAAATCAA+TGG | - | chr8_2:52632170-52632189 | Msa1254520:CDS | 30.0% | |
| TTTAGCATGAGATTACTTCT+TGG | - | chr8_2:52632201-52632220 | Msa1254520:CDS | 30.0% | |
| TAGAGAAATAACATGGAGTT+TGG | - | chr8_2:52632349-52632368 | Msa1254520:CDS | 30.0% | |
| CATTTCAGCGTTACAGATAT+TGG | + | chr8_2:52628145-52628164 | None:intergenic | 35.0% | |
| TAAACCAGATTAAAACGGGT+CGG | + | chr8_2:52628213-52628232 | None:intergenic | 35.0% | |
| ! | GGTTTAAAATGAACTGGATC+AGG | - | chr8_2:52628227-52628246 | Msa1254520:exon | 35.0% |
| AGGTCAAATGAAAGTGGTTT+GGG | - | chr8_2:52628247-52628266 | Msa1254520:CDS | 35.0% | |
| ! | GGTTCACCATATTTTCAGTT+TGG | - | chr8_2:52628282-52628301 | Msa1254520:CDS | 35.0% |
| TTCAAATGGGTCATCTATTG+CGG | + | chr8_2:52628341-52628360 | None:intergenic | 35.0% | |
| TATCGTTAGATTCATCTCGA+TGG | - | chr8_2:52628437-52628456 | Msa1254520:intron | 35.0% | |
| TCAGCTGTGTCAAGTATTAT+GGG | - | chr8_2:52628552-52628571 | Msa1254520:intron | 35.0% | |
| ! | TGAGAAATTCTAGCTATGTG+TGG | - | chr8_2:52628709-52628728 | Msa1254520:CDS | 35.0% |
| GGGTCAAAACTTAAGGATTA+GGG | - | chr8_2:52628754-52628773 | Msa1254520:CDS | 35.0% | |
| GACATGTGAATACTATGCTT+AGG | - | chr8_2:52628879-52628898 | Msa1254520:intron | 35.0% | |
| TGACATGAAAAATACCACGA+AGG | - | chr8_2:52629002-52629021 | Msa1254520:intron | 35.0% | |
| AAAATACCACGAAGGAAAGT+AGG | - | chr8_2:52629010-52629029 | Msa1254520:intron | 35.0% | |
| !!! | CCCAATTCACTTGTTTTGTT+TGG | + | chr8_2:52629179-52629198 | None:intergenic | 35.0% |
| GAATTGGGATTTCAGTATCT+CGG | - | chr8_2:52629191-52629210 | Msa1254520:intron | 35.0% | |
| !!! | CAGTTTTTTGTCAAACGAGT+TGG | + | chr8_2:52629243-52629262 | None:intergenic | 35.0% |
| TAAGTTTGAGGGTTGAATCT+CGG | + | chr8_2:52629336-52629355 | None:intergenic | 35.0% | |
| AATCACAAACTAGAGATGAG+AGG | - | chr8_2:52629472-52629491 | Msa1254520:intron | 35.0% | |
| TGAGAGGACAATAATGCATT+TGG | - | chr8_2:52629488-52629507 | Msa1254520:intron | 35.0% | |
| GAGAGGACAATAATGCATTT+GGG | - | chr8_2:52629489-52629508 | Msa1254520:intron | 35.0% | |
| AGAGGACAATAATGCATTTG+GGG | - | chr8_2:52629490-52629509 | Msa1254520:intron | 35.0% | |
| !! | TAGAAACTTGCTGAAACACA+TGG | + | chr8_2:52629531-52629550 | None:intergenic | 35.0% |
| TCCAACTGGCTATAAAACAA+AGG | - | chr8_2:52629675-52629694 | Msa1254520:intron | 35.0% | |
| CCAACTGGCTATAAAACAAA+GGG | - | chr8_2:52629676-52629695 | Msa1254520:intron | 35.0% | |
| GTAGTAGAAGACATCAAAGA+AGG | + | chr8_2:52630105-52630124 | None:intergenic | 35.0% | |
| AAGACCAAACAATGTGTTGA+GGG | + | chr8_2:52630237-52630256 | None:intergenic | 35.0% | |
| TAAGACCAAACAATGTGTTG+AGG | + | chr8_2:52630238-52630257 | None:intergenic | 35.0% | |
| TTGTAACACAACCTCAATTG+AGG | + | chr8_2:52630284-52630303 | None:intergenic | 35.0% | |
| TGCTAATATCCATAGACATC+CGG | + | chr8_2:52630513-52630532 | None:intergenic | 35.0% | |
| ATGGATATTAGCAGAGCTTT+CGG | - | chr8_2:52630520-52630539 | Msa1254520:intron | 35.0% | |
| AAAGAAATCAGTACCTCTTC+CGG | + | chr8_2:52630563-52630582 | None:intergenic | 35.0% | |
| AAAGGAAGAATACTGATCCA+AGG | - | chr8_2:52631521-52631540 | Msa1254520:intron | 35.0% | |
| AAGGAAGAATACTGATCCAA+GGG | - | chr8_2:52631522-52631541 | Msa1254520:intron | 35.0% | |
| ! | AGTTTAGCACCTTTTATTGG+GGG | + | chr8_2:52631925-52631944 | None:intergenic | 35.0% |
| ! | CAGTTTAGCACCTTTTATTG+GGG | + | chr8_2:52631926-52631945 | None:intergenic | 35.0% |
| !! | TCTTTTAAGGGCATATCTTC+TGG | + | chr8_2:52632018-52632037 | None:intergenic | 35.0% |
| TTAGCACAAATCAATGGACA+TGG | - | chr8_2:52632176-52632195 | Msa1254520:CDS | 35.0% | |
| CTAGCTATGCAAATACTTAC+AGG | + | chr8_2:52632332-52632351 | None:intergenic | 35.0% | |
| GCATAGCTAGAGAAATAACA+TGG | - | chr8_2:52632342-52632361 | Msa1254520:CDS | 35.0% | |
| !! | TTCGTAACGTTTGGCTTGTT+CGG | + | chr8_2:52627899-52627918 | None:intergenic | 40.0% |
| ! | GATGACGTTTTTGTAAGCGA+CGG | + | chr8_2:52628001-52628020 | None:intergenic | 40.0% |
| GTCGCTTACAAAAACGTCAT+CGG | - | chr8_2:52628000-52628019 | Msa1254520:three_prime_UTR | 40.0% | |
| ACTTTCTTCCTTCTGTTCGA+TGG | + | chr8_2:52628058-52628077 | None:intergenic | 40.0% | |
| GAACAGAAGGAAGAAAGTTG+TGG | - | chr8_2:52628060-52628079 | Msa1254520:three_prime_UTR | 40.0% | |
| TGGATCAGGTCAAATGAAAG+TGG | - | chr8_2:52628241-52628260 | Msa1254520:CDS | 40.0% | |
| CAGGTCAAATGAAAGTGGTT+TGG | - | chr8_2:52628246-52628265 | Msa1254520:CDS | 40.0% | |
| !!! | TGGTTTGGGCTTTTCTAGTT+TGG | - | chr8_2:52628261-52628280 | Msa1254520:CDS | 40.0% |
| GCTGACCCAAACTGAAAATA+TGG | + | chr8_2:52628291-52628310 | None:intergenic | 40.0% | |
| TCAAATGGGTCATCTATTGC+GGG | + | chr8_2:52628340-52628359 | None:intergenic | 40.0% | |
| GTCAGCTGTGTCAAGTATTA+TGG | - | chr8_2:52628551-52628570 | Msa1254520:intron | 40.0% | |
| CTGTGTCAAGTATTATGGGA+CGG | - | chr8_2:52628556-52628575 | Msa1254520:intron | 40.0% | |
| TGTGTCAAGTATTATGGGAC+GGG | - | chr8_2:52628557-52628576 | Msa1254520:intron | 40.0% | |
| TCAAGTGGGGTCAAAACTTA+AGG | - | chr8_2:52628747-52628766 | Msa1254520:CDS | 40.0% | |
| GGGGTCAAAACTTAAGGATT+AGG | - | chr8_2:52628753-52628772 | Msa1254520:CDS | 40.0% | |
| AACTTTCCTACTTTCCTTCG+TGG | + | chr8_2:52629019-52629038 | None:intergenic | 40.0% | |
| AAGTTTGAGGGTTGAATCTC+GGG | + | chr8_2:52629335-52629354 | None:intergenic | 40.0% | |
| !!! | CCCTTTGTTTTATAGCCAGT+TGG | + | chr8_2:52629679-52629698 | None:intergenic | 40.0% |
| ATAAAACAAAGGGCCTCTTG+TGG | - | chr8_2:52629686-52629705 | Msa1254520:intron | 40.0% | |
| ! | TGACAGAAGAAAGGTTTTGC+AGG | + | chr8_2:52629739-52629758 | None:intergenic | 40.0% |
| ! | GAGACTATGATGTTGGTGAA+TGG | + | chr8_2:52629762-52629781 | None:intergenic | 40.0% |
| ! | AAGTGCCTATGCTGATTATG+TGG | - | chr8_2:52630056-52630075 | Msa1254520:intron | 40.0% |
| ! | AGTGCCTATGCTGATTATGT+GGG | - | chr8_2:52630057-52630076 | Msa1254520:intron | 40.0% |
| CTTACCCACATAATCAGCAT+AGG | + | chr8_2:52630064-52630083 | None:intergenic | 40.0% | |
| AGCTATGCCAAGCATAATTG+AGG | + | chr8_2:52630172-52630191 | None:intergenic | 40.0% | |
| !! | AATGTGTTGAGGGTACCATA+GGG | + | chr8_2:52630227-52630246 | None:intergenic | 40.0% |
| AACCTCAATTGAGGTCTTAC+CGG | + | chr8_2:52630275-52630294 | None:intergenic | 40.0% | |
| AGGAAGAATACTGATCCAAG+GGG | - | chr8_2:52631523-52631542 | Msa1254520:intron | 40.0% | |
| AGCTGTTCCAAAACCGAAAA+GGG | + | chr8_2:52631558-52631577 | None:intergenic | 40.0% | |
| AATGGGTGCATGTTTCTTTG+CGG | - | chr8_2:52631882-52631901 | Msa1254520:intron | 40.0% | |
| ! | AGCTGATGTTATTCCCCTTT+TGG | - | chr8_2:52631958-52631977 | Msa1254520:intron | 40.0% |
| ! | GCTGATGTTATTCCCCTTTT+GGG | - | chr8_2:52631959-52631978 | Msa1254520:intron | 40.0% |
| CTCAAAATCAGACCCAAAAG+GGG | + | chr8_2:52631974-52631993 | None:intergenic | 40.0% | |
| GCTCAAAATCAGACCCAAAA+GGG | + | chr8_2:52631975-52631994 | None:intergenic | 40.0% | |
| TGCTCAAAATCAGACCCAAA+AGG | + | chr8_2:52631976-52631995 | None:intergenic | 40.0% | |
| !! | TTTTGGGTCTGATTTTGAGC+AGG | - | chr8_2:52631975-52631994 | Msa1254520:intron | 40.0% |
| GAAGTTTCGGAAGTTTCTCA+AGG | + | chr8_2:52632074-52632093 | None:intergenic | 40.0% | |
| AGTATGTAGCTTGAAGGCAA+AGG | + | chr8_2:52632127-52632146 | None:intergenic | 40.0% | |
| ATGTAGACGAACTCTTCACG+TGG | + | chr8_2:52627865-52627884 | None:intergenic | 45.0% | |
| ACGTGAAGAGTTCGTCTACA+TGG | - | chr8_2:52627864-52627883 | Msa1254520:three_prime_UTR | 45.0% | |
| AGCCAAACGTTACGAAGAGA+TGG | - | chr8_2:52627903-52627922 | Msa1254520:three_prime_UTR | 45.0% | |
| GACCATCTCTTCGTAACGTT+TGG | + | chr8_2:52627908-52627927 | None:intergenic | 45.0% | |
| ! | CGAAGAGATGGTCGATTTCA+TGG | - | chr8_2:52627915-52627934 | Msa1254520:three_prime_UTR | 45.0% |
| CATCTCTTCCATCGAACAGA+AGG | - | chr8_2:52628047-52628066 | Msa1254520:three_prime_UTR | 45.0% | |
| !! | GGTAACCGACCCGTTTTAAT+GGG | - | chr8_2:52628184-52628203 | Msa1254520:three_prime_UTR | 45.0% |
| GGTTACCCATTAAAACGGGT+CGG | + | chr8_2:52628192-52628211 | None:intergenic | 45.0% | |
| GGTCGGTTACCCATTAAAAC+GGG | + | chr8_2:52628196-52628215 | None:intergenic | 45.0% | |
| GGGTCGGTTACCCATTAAAA+CGG | + | chr8_2:52628197-52628216 | None:intergenic | 45.0% | |
| !! | GTAACCGACCCGTTTTAATC+TGG | - | chr8_2:52628206-52628225 | Msa1254520:three_prime_UTR | 45.0% |
| ATAGCATCATCCCTAACGCA+TGG | - | chr8_2:52628815-52628834 | Msa1254520:intron | 45.0% | |
| ACCATGCATTCCATGCGTTA+GGG | + | chr8_2:52628828-52628847 | None:intergenic | 45.0% | |
| AACCATGCATTCCATGCGTT+AGG | + | chr8_2:52628829-52628848 | None:intergenic | 45.0% | |
| TACATGATACATGCGCATGG+TGG | + | chr8_2:52629618-52629637 | None:intergenic | 45.0% | |
| GCATACATGATACATGCGCA+TGG | + | chr8_2:52629621-52629640 | None:intergenic | 45.0% | |
| ! | AACCAAAGCATCACTCCAAC+TGG | - | chr8_2:52629661-52629680 | Msa1254520:intron | 45.0% |
| ! | GAAGAAAGGTTTTGCAGGTG+AGG | + | chr8_2:52629734-52629753 | None:intergenic | 45.0% |
| GGTGAATGGTGACAGAAGAA+AGG | + | chr8_2:52629748-52629767 | None:intergenic | 45.0% | |
| GCAGGATCCTCAATTATGCT+TGG | - | chr8_2:52630162-52630181 | Msa1254520:intron | 45.0% | |
| !! | CAATGTGTTGAGGGTACCAT+AGG | + | chr8_2:52630228-52630247 | None:intergenic | 45.0% |
| GGTACCCTCAACACATTGTT+TGG | - | chr8_2:52630230-52630249 | Msa1254520:intron | 45.0% | |
| TCTTAGCACAAATCCAGTCC+CGG | - | chr8_2:52630253-52630272 | Msa1254520:intron | 45.0% | |
| ACCTCAATTGAGGTCTTACC+GGG | + | chr8_2:52630274-52630293 | None:intergenic | 45.0% | |
| ATACTCCGCTTTGCAGAGTT+CGG | + | chr8_2:52630477-52630496 | None:intergenic | 45.0% | |
| ! | GAGTATCCATGGTTTGTGAC+CGG | - | chr8_2:52630491-52630510 | Msa1254520:intron | 45.0% |
| ! | AGAGTAGCCCTTTTCGGTTT+TGG | - | chr8_2:52631548-52631567 | Msa1254520:intron | 45.0% |
| CAGCTGTTCCAAAACCGAAA+AGG | + | chr8_2:52631559-52631578 | None:intergenic | 45.0% | |
| ! | ATCATGGCTTGCGTGTAACA+TGG | - | chr8_2:52631615-52631634 | Msa1254520:intron | 45.0% |
| GTACTTTGGGCATGCAGATA+AGG | - | chr8_2:52631824-52631843 | Msa1254520:intron | 45.0% | |
| !! | ATTATATATTAGTATAAAAT+AGG | + | chr8_2:52630127-52630146 | None:intergenic | 5.0% |
| !!! | TATATATATAACATTATTTT+TGG | + | chr8_2:52630810-52630829 | None:intergenic | 5.0% |
| ACGAACTCTTCACGTGGTGA+TGG | + | chr8_2:52627859-52627878 | None:intergenic | 50.0% | |
| GGTGAGTTCTTCGCTTTCGA+CGG | + | chr8_2:52627956-52627975 | None:intergenic | 50.0% | |
| GAGGAGGTTACGTTCTTCGA+CGG | + | chr8_2:52627977-52627996 | None:intergenic | 50.0% | |
| ! | TTTTGTAAGCGACGGAGAGG+AGG | + | chr8_2:52627993-52628012 | None:intergenic | 50.0% |
| ! | CGTTTTTGTAAGCGACGGAG+AGG | + | chr8_2:52627996-52628015 | None:intergenic | 50.0% |
| ! | GGGTAACCGACCCGTTTTAA+TGG | - | chr8_2:52628183-52628202 | Msa1254520:three_prime_UTR | 50.0% |
| ! | GTAGGGGTGTGCATAGAAAC+TGG | + | chr8_2:52628318-52628337 | None:intergenic | 50.0% |
| TGGGTCATCTATTGCGGGTA+GGG | + | chr8_2:52628335-52628354 | None:intergenic | 50.0% | |
| ATGGGTCATCTATTGCGGGT+AGG | + | chr8_2:52628336-52628355 | None:intergenic | 50.0% | |
| TCCCTAACGCATGGAATGCA+TGG | - | chr8_2:52628824-52628843 | Msa1254520:intron | 50.0% | |
| ! | ACGAGTTGGGAAGAGCAAGA+GGG | + | chr8_2:52629229-52629248 | None:intergenic | 50.0% |
| ! | AACGAGTTGGGAAGAGCAAG+AGG | + | chr8_2:52629230-52629249 | None:intergenic | 50.0% |
| AGCCAGTTGGAGTGATGCTT+TGG | + | chr8_2:52629666-52629685 | None:intergenic | 50.0% | |
| AATTGAGGTCTTACCGGGAC+TGG | + | chr8_2:52630269-52630288 | None:intergenic | 50.0% | |
| TCCCGGTAAGACCTCAATTG+AGG | - | chr8_2:52630270-52630289 | Msa1254520:intron | 50.0% | |
| ! | TCTGCAAAGCGGAGTATCCA+TGG | - | chr8_2:52630480-52630499 | Msa1254520:intron | 50.0% |
| AGACATCCGGTCACAAACCA+TGG | + | chr8_2:52630500-52630519 | None:intergenic | 50.0% | |
| GGTTTGTGACCGGATGTCTA+TGG | - | chr8_2:52630501-52630520 | Msa1254520:intron | 50.0% | |
| GGTCATAGCTGCAGATACAC+CGG | - | chr8_2:52630541-52630560 | Msa1254520:intron | 50.0% | |
| AAAGGGCTACTCTTTCCCCT+TGG | + | chr8_2:52631541-52631560 | None:intergenic | 50.0% | |
| ! | GGGGAAAGAGTAGCCCTTTT+CGG | - | chr8_2:52631542-52631561 | Msa1254520:intron | 50.0% |
| CAAGCCATGATGCTGCAACA+TGG | + | chr8_2:52631606-52631625 | None:intergenic | 50.0% | |
| !! | CTCTTCACGTGGTGATGGTG+CGG | + | chr8_2:52627854-52627873 | None:intergenic | 55.0% |
| GAGTTCTTCGCTTTCGACGG+CGG | + | chr8_2:52627953-52627972 | None:intergenic | 55.0% | |
| GGGTCATCTATTGCGGGTAG+GGG | + | chr8_2:52628334-52628353 | None:intergenic | 55.0% | |
| !! | CATGCGCATGGTGGACATGT+GGG | + | chr8_2:52629609-52629628 | None:intergenic | 55.0% |
| !! | ACATGCGCATGGTGGACATG+TGG | + | chr8_2:52629610-52629629 | None:intergenic | 55.0% |
| CCTTGCCGAACTCTGCAAAG+CGG | - | chr8_2:52630469-52630488 | Msa1254520:intron | 55.0% | |
| AGCTGCAGATACACCGGAAG+AGG | - | chr8_2:52630547-52630566 | Msa1254520:intron | 55.0% | |
| GCCTCCATGTTGCAGCATCA+TGG | - | chr8_2:52631599-52631618 | Msa1254520:intron | 55.0% | |
| GCCATGATGCTGCAACATGG+AGG | + | chr8_2:52631603-52631622 | None:intergenic | 55.0% | |
| TCGGAGCACAACGTGCTTCG+TGG | - | chr8_2:52628019-52628038 | Msa1254520:three_prime_UTR | 60.0% | |
| CCGCTTTGCAGAGTTCGGCA+AGG | + | chr8_2:52630472-52630491 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 52627844 | 52632455 | 52627844 | ID=Msa1254520;Name=Msa1254520 |
| chr8_2 | mRNA | 52627844 | 52632455 | 52627844 | ID=Msa1254520-mRNA-1;Parent=Msa1254520;Name=Msa1254520-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0.25|0.4|1|1|1|5|390|224 |
| chr8_2 | exon | 52627844 | 52628302 | 52627844 | ID=Msa1254520-mRNA-1:exon:16236;Parent=Msa1254520-mRNA-1 |
| chr8_2 | exon | 52628671 | 52628784 | 52628671 | ID=Msa1254520-mRNA-1:exon:16235;Parent=Msa1254520-mRNA-1 |
| chr8_2 | exon | 52629731 | 52629837 | 52629731 | ID=Msa1254520-mRNA-1:exon:16234;Parent=Msa1254520-mRNA-1 |
| chr8_2 | exon | 52630069 | 52630133 | 52630069 | ID=Msa1254520-mRNA-1:exon:16233;Parent=Msa1254520-mRNA-1 |
| chr8_2 | exon | 52632136 | 52632455 | 52632136 | ID=Msa1254520-mRNA-1:exon:16232;Parent=Msa1254520-mRNA-1 |
| chr8_2 | CDS | 52632136 | 52632455 | 52632136 | ID=Msa1254520-mRNA-1:cds;Parent=Msa1254520-mRNA-1 |
| chr8_2 | CDS | 52630069 | 52630133 | 52630069 | ID=Msa1254520-mRNA-1:cds;Parent=Msa1254520-mRNA-1 |
| chr8_2 | CDS | 52629731 | 52629837 | 52629731 | ID=Msa1254520-mRNA-1:cds;Parent=Msa1254520-mRNA-1 |
| chr8_2 | CDS | 52628671 | 52628784 | 52628671 | ID=Msa1254520-mRNA-1:cds;Parent=Msa1254520-mRNA-1 |
| chr8_2 | CDS | 52628234 | 52628302 | 52628234 | ID=Msa1254520-mRNA-1:cds;Parent=Msa1254520-mRNA-1 |
| chr8_2 | three_prime_UTR | 52627844 | 52628233 | 52627844 | ID=Msa1254520-mRNA-1:three_prime_utr;Parent=Msa1254520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
