AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256120 MtrunA17_Chr4g0053001 97.583 331 7 1 1 330 1 331 0.0 669
Msa1256120 MtrunA17_Chr6g0483441 50.307 326 122 8 12 329 1 294 4.34e-96 286
Msa1256120 MtrunA17_Chr8g0392551 51.572 318 132 5 12 329 1 296 4.46e-92 276
Msa1256120 MtrunA17_Chr2g0331671 42.320 319 168 11 14 329 4 309 5.56e-70 220
Msa1256120 MtrunA17_Chr4g0038691 44.377 329 160 10 10 329 4 318 4.22e-69 218
Msa1256120 MtrunA17_Chr6g0486001 40.615 325 169 9 12 330 1 307 4.02e-58 189
Msa1256120 MtrunA17_Chr3g0091821 56.688 157 62 3 171 326 39 190 5.95e-49 162
Msa1256120 MtrunA17_Chr3g0090061 26.471 306 187 11 39 311 29 329 6.20e-19 86.3
Msa1256120 MtrunA17_Chr8g0379281 47.253 91 39 1 146 236 105 186 2.01e-18 82.4
Msa1256120 MtrunA17_Chr8g0379271 34.375 96 59 2 236 329 1 94 3.99e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256120 AT1G45688.1 52.464 345 128 8 12 327 1 338 2.74e-99 296
Msa1256120 AT5G42860.1 49.258 337 129 7 12 327 1 316 2.28e-94 283
Msa1256120 AT1G45688.2 50.598 251 93 7 12 244 1 238 5.18e-74 229
Msa1256120 AT2G41990.1 38.801 317 170 7 12 326 1 295 8.53e-51 171
Msa1256120 AT4G35170.1 36.364 308 174 7 25 327 7 297 1.02e-50 171
Msa1256120 AT3G24600.1 32.500 320 188 7 12 325 2 299 2.00e-36 133
Msa1256120 AT3G24605.1 30.921 304 185 8 10 311 1 281 3.59e-36 132
Msa1256120 AT3G08490.1 23.585 212 155 4 121 326 57 267 4.19e-17 80.5

Find 99 sgRNAs with CRISPR-Local

Find 308 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAAGTGGGCTTGAGTTAA+AGG 0.197154 8_2:+55880685 None:intergenic
AGAGTTATTGTTAGTGTAAT+TGG 0.210630 8_2:+55880919 None:intergenic
CAAAATCTAAATTACACTTT+TGG 0.222927 8_2:+55878973 None:intergenic
GATTATGGATCCGAAGAAAA+TGG 0.228318 8_2:-55879237 Msa1256120:CDS
ACCATTGACATTGAATATTA+TGG 0.231681 8_2:-55879330 Msa1256120:CDS
GCCAATTACCTTTCCTGTTA+TGG 0.240601 8_2:+55880552 None:intergenic
AGGTCAAAAGCTTATGTATT+AGG 0.241379 8_2:-55879305 Msa1256120:CDS
TAATTTATGTAGTAATTTAA+AGG 0.265793 8_2:-55879121 Msa1256120:three_prime_UTR
GTTCTATTTCAACTTCAAAT+AGG 0.289456 8_2:-55878944 Msa1256120:three_prime_UTR
CCAATTACCTTTCCTGTTAT+GGG 0.301565 8_2:+55880553 None:intergenic
AATTTATGTAGTAATTTAAA+GGG 0.302845 8_2:-55879120 Msa1256120:three_prime_UTR
AATTGAGTGTGCATTGATTA+TGG 0.311781 8_2:-55879252 Msa1256120:CDS
TGTAGTAATTTAAAGGGGTT+TGG 0.318283 8_2:-55879114 Msa1256120:three_prime_UTR
GGAAGTCATATTCCACTATA+TGG 0.335033 8_2:-55879401 Msa1256120:CDS
CCCATAACAGGAAAGGTAAT+TGG 0.338006 8_2:-55880553 Msa1256120:CDS
GTAGTAATTTAAAGGGGTTT+GGG 0.346739 8_2:-55879113 Msa1256120:three_prime_UTR
GGTCAAAAGCTTATGTATTA+GGG 0.353077 8_2:-55879304 Msa1256120:CDS
GCAGTCAAGCTTCCCATAAC+AGG 0.360744 8_2:-55880565 Msa1256120:CDS
ATCTGCATAGCGTAAGTGTT+GGG 0.373743 8_2:+55880983 None:intergenic
TATTGTTACATGAAATTTGA+AGG 0.377989 8_2:-55879003 Msa1256120:three_prime_UTR
TGGTAATAATTGAGATCTAA+TGG 0.385611 8_2:+55879589 None:intergenic
GGCTAACATTGTAATGTTGT+TGG 0.400142 8_2:+55880838 None:intergenic
TTGTTGATGAAGTTTGAGTT+TGG 0.400789 8_2:+55880879 None:intergenic
TACCAACTTACACTAGCAAC+TGG 0.405417 8_2:-55879571 Msa1256120:CDS
GTCAATGGTACCGGTTCAAC+CGG 0.412848 8_2:+55879344 None:intergenic
AAGAAGTCCTTCTTCTTCAA+TGG 0.413272 8_2:+55880505 None:intergenic
CACTTGTTGGTAAGTCGAAT+AGG 0.431111 8_2:+55879209 None:intergenic
TCTCATTCCAACTCATCGTT+GGG 0.432926 8_2:-55880638 Msa1256120:CDS
AGCTTATGTATTAGGGGCAT+TGG 0.433647 8_2:-55879297 Msa1256120:CDS
GGAAAGGTAATTGGCGTCCT+TGG 0.434224 8_2:-55880544 Msa1256120:CDS
CAATGGTTCACCGGTTGAAC+CGG 0.434589 8_2:-55879354 Msa1256120:CDS
TTTCTTGATTGATAAAACTT+AGG 0.441416 8_2:+55879455 None:intergenic
GCAGGAAAATAGCATCTCCT+AGG 0.445069 8_2:+55880452 None:intergenic
CAAGCGGGTGCGGATTTGTC+AGG 0.445363 8_2:-55879703 Msa1256120:CDS
TTCTCATTCCAACTCATCGT+TGG 0.452096 8_2:-55880639 Msa1256120:CDS
TAACTCATACGTACACTTGT+TGG 0.455029 8_2:+55879196 None:intergenic
TTTAATGCCATTGAAGAAGA+AGG 0.460904 8_2:-55880512 Msa1256120:CDS
TTGTCGGTGAGGATTGTGTT+AGG 0.463501 8_2:+55880792 None:intergenic
TCATTTATTACTTCCACGTA+TGG 0.474436 8_2:+55879159 None:intergenic
GCTTACCTCGGAGTCTGTCT+TGG 0.474995 8_2:+55880817 None:intergenic
AGCCCACTTCAAAGCCCGTT+GGG 0.480036 8_2:-55880674 Msa1256120:CDS
AAGAAACAAACAACAAAAGC+AGG 0.480722 8_2:+55880434 None:intergenic
ATTATGGATCCGAAGAAAAT+GGG 0.484777 8_2:-55879236 Msa1256120:CDS
GCAAGATTGAACACTGTCAA+TGG 0.507281 8_2:-55879371 Msa1256120:CDS
CGTTGGAAGAGTCGCGTGAT+GGG 0.507373 8_2:+55880729 None:intergenic
AATGAGGAGGAGATCCCAAC+GGG 0.512593 8_2:+55880660 None:intergenic
TTCCAGTTGCTAGTGTAAGT+TGG 0.513143 8_2:+55879569 None:intergenic
ACCATAATATTCAATGTCAA+TGG 0.513438 8_2:+55879329 None:intergenic
GAGGAAGATTCACGTGAATG+TGG 0.516881 8_2:+55880614 None:intergenic
ATTTATCATTCAAGCGGGTG+CGG 0.517433 8_2:-55879713 Msa1256120:CDS
CGTAAGTGTTGGGGCATGCA+AGG 0.518852 8_2:+55880993 None:intergenic
AGGTAATTGGCGTCCTTGGA+AGG 0.521480 8_2:-55880540 Msa1256120:CDS
TCGTTGGAAGAGTCGCGTGA+TGG 0.526058 8_2:+55880728 None:intergenic
TCTATTAAAGTGATGGTGAA+AGG 0.536712 8_2:-55879422 Msa1256120:CDS
ATATTCAATGTCAATGGTAC+CGG 0.541625 8_2:+55879335 None:intergenic
TAACATTGTAATGTTGTTGG+TGG 0.542071 8_2:+55880841 None:intergenic
GAACACTGTCAATGGTTCAC+CGG 0.544355 8_2:-55879363 Msa1256120:CDS
TCAAAGATCTATTAAAGTGA+TGG 0.545202 8_2:-55879429 Msa1256120:CDS
ATGCAGATCGTGGATTCCCT+AGG 0.552676 8_2:-55880469 Msa1256120:CDS
GTCAGGAGTTGCCACTAGCA+TGG 0.553632 8_2:-55879686 Msa1256120:CDS
ATCCCAACGGGCTTTGAAGT+GGG 0.555397 8_2:+55880672 None:intergenic
TAGTAATTTAAAGGGGTTTG+GGG 0.558099 8_2:-55879112 Msa1256120:three_prime_UTR
GATCCCAACGGGCTTTGAAG+TGG 0.558461 8_2:+55880671 None:intergenic
AGCCCATCACGTGATCTTGT+CGG 0.561235 8_2:+55880776 None:intergenic
GTCATATTCCACTATATGGA+GGG 0.565203 8_2:-55879397 Msa1256120:CDS
TTGTGTTAGGCTGCTTACCT+CGG 0.565391 8_2:+55880805 None:intergenic
AAGCCCACTTCAAAGCCCGT+TGG 0.565440 8_2:-55880675 Msa1256120:CDS
GATAGATTTATCATTCAAGC+GGG 0.565737 8_2:-55879718 Msa1256120:CDS
GATGAGTTGGAATGAGAATG+AGG 0.578944 8_2:+55880644 None:intergenic
AATCTGCATAGCGTAAGTGT+TGG 0.579164 8_2:+55880982 None:intergenic
CAGGAAAATAGCATCTCCTA+GGG 0.584033 8_2:+55880453 None:intergenic
CTAATGGAGTTGATGCAACA+TGG 0.586151 8_2:+55879605 None:intergenic
ATTTATGTAGTAATTTAAAG+GGG 0.587629 8_2:-55879119 Msa1256120:three_prime_UTR
TGATAGATTTATCATTCAAG+CGG 0.599846 8_2:-55879719 Msa1256120:CDS
CACCGACAAGATCACGTGAT+GGG 0.601025 8_2:-55880778 Msa1256120:CDS
TCATATTCCACTATATGGAG+GGG 0.602380 8_2:-55879396 Msa1256120:CDS
CAAGCTTCCCATAACAGGAA+AGG 0.602700 8_2:-55880560 Msa1256120:CDS
ATGTGGGCCCAACGATGAGT+TGG 0.610898 8_2:+55880631 None:intergenic
CATATTCCACTATATGGAGG+GGG 0.611721 8_2:-55879395 Msa1256120:CDS
GCATTAAACTGATCCTTCCA+AGG 0.614580 8_2:+55880527 None:intergenic
TCTGCATAGCGTAAGTGTTG+GGG 0.616021 8_2:+55880984 None:intergenic
AGTCATATTCCACTATATGG+AGG 0.618199 8_2:-55879398 Msa1256120:CDS
ATTCATGGACACCATGCTAG+TGG 0.619012 8_2:+55879675 None:intergenic
TGACATTGAATATTATGGTG+AGG 0.620220 8_2:-55879325 Msa1256120:CDS
ATCACGTGATCTTGTCGGTG+AGG 0.634015 8_2:+55880781 None:intergenic
AGGAAGATTCACGTGAATGT+GGG 0.636052 8_2:+55880615 None:intergenic
GTCAAAAGCTTATGTATTAG+GGG 0.642134 8_2:-55879303 Msa1256120:CDS
GATGATGATGATGCAGATCG+TGG 0.642710 8_2:-55880479 Msa1256120:CDS
AGCTTGACTGCTCTTACGTG+AGG 0.648575 8_2:+55880577 None:intergenic
TCACCGACAAGATCACGTGA+TGG 0.649203 8_2:-55880779 Msa1256120:CDS
TATCATGTTTGATGAGTGAG+TGG 0.654886 8_2:+55880950 None:intergenic
GAATGAGGAGGAGATCCCAA+CGG 0.666085 8_2:+55880659 None:intergenic
GGGCATGCAAGGACAGCTAG+TGG 0.666634 8_2:+55881004 None:intergenic
GAGTTGGAATGAGAATGAGG+AGG 0.698188 8_2:+55880647 None:intergenic
AGACTCGATCATACCATACG+TGG 0.703910 8_2:-55879172 Msa1256120:three_prime_UTR
ACGTGAGGCAGAGTATCTCG+TGG 0.711321 8_2:+55880592 None:intergenic
TCACGCGACTCTTCCAACGA+CGG 0.716008 8_2:-55880725 Msa1256120:CDS
TGAGGCAGAGTATCTCGTGG+AGG 0.725109 8_2:+55880595 None:intergenic
GTTAGCCAAGACAGACTCCG+AGG 0.733209 8_2:-55880822 Msa1256120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAAAAAGAAATTTA+TGG + chr8_2:55880057-55880076 None:intergenic 10.0%
!! TACTATATGATTAATTAATT+TGG + chr8_2:55880457-55880476 None:intergenic 10.0%
!! TAATTTATGTAGTAATTTAA+AGG - chr8_2:55880844-55880863 Msa1256120:CDS 10.0%
!! AATTTATGTAGTAATTTAAA+GGG - chr8_2:55880845-55880864 Msa1256120:CDS 10.0%
!! AATAACTAAAAAGAAATTTA+TGG + chr8_2:55880057-55880076 None:intergenic 10.0%
!! TACTATATGATTAATTAATT+TGG + chr8_2:55880457-55880476 None:intergenic 10.0%
!! TAATTTATGTAGTAATTTAA+AGG - chr8_2:55880844-55880863 Msa1256120:CDS 10.0%
!! AATTTATGTAGTAATTTAAA+GGG - chr8_2:55880845-55880864 Msa1256120:CDS 10.0%
!! TCATATAGTATTACATTATA+TGG - chr8_2:55880467-55880486 Msa1256120:CDS 15.0%
!! ATTTATGTAGTAATTTAAAG+GGG - chr8_2:55880846-55880865 Msa1256120:CDS 15.0%
!!! AAAATCTAAATTACACTTTT+GGG + chr8_2:55880994-55881013 None:intergenic 15.0%
!! TCATATAGTATTACATTATA+TGG - chr8_2:55880467-55880486 Msa1256120:CDS 15.0%
!! ATTTATGTAGTAATTTAAAG+GGG - chr8_2:55880846-55880865 Msa1256120:CDS 15.0%
!!! AAAATCTAAATTACACTTTT+GGG + chr8_2:55880994-55881013 None:intergenic 15.0%
!! TACATTGAAATTAGAAATGA+TGG + chr8_2:55879638-55879657 None:intergenic 20.0%
!! ATCATTTCTAATTTCAATGT+AGG - chr8_2:55879637-55879656 Msa1256120:CDS 20.0%
!!! TTTTATTTGAATTGACAGTT+AGG + chr8_2:55879888-55879907 None:intergenic 20.0%
!! TTTCTTGATTGATAAAACTT+AGG + chr8_2:55880513-55880532 None:intergenic 20.0%
!! TATTGTTACATGAAATTTGA+AGG - chr8_2:55880962-55880981 Msa1256120:five_prime_UTR 20.0%
!!! CAAAATCTAAATTACACTTT+TGG + chr8_2:55880995-55881014 None:intergenic 20.0%
!!! AAGTGTAATTTAGATTTTGT+CGG - chr8_2:55880996-55881015 Msa1256120:five_prime_UTR 20.0%
!! TACATTGAAATTAGAAATGA+TGG + chr8_2:55879638-55879657 None:intergenic 20.0%
!! ATCATTTCTAATTTCAATGT+AGG - chr8_2:55879637-55879656 Msa1256120:CDS 20.0%
!!! TTTTATTTGAATTGACAGTT+AGG + chr8_2:55879888-55879907 None:intergenic 20.0%
!! TTTCTTGATTGATAAAACTT+AGG + chr8_2:55880513-55880532 None:intergenic 20.0%
!! TATTGTTACATGAAATTTGA+AGG - chr8_2:55880962-55880981 Msa1256120:five_prime_UTR 20.0%
!!! CAAAATCTAAATTACACTTT+TGG + chr8_2:55880995-55881014 None:intergenic 20.0%
!!! AAGTGTAATTTAGATTTTGT+CGG - chr8_2:55880996-55881015 Msa1256120:five_prime_UTR 20.0%
! AGAGTTATTGTTAGTGTAAT+TGG + chr8_2:55879049-55879068 None:intergenic 25.0%
! ACATCATTCAATGAAATCAT+AGG + chr8_2:55879806-55879825 None:intergenic 25.0%
! CAGATTTAGTATCATTAATG+TGG + chr8_2:55879967-55879986 None:intergenic 25.0%
! TACTAAATCTGTATTTGAAG+TGG - chr8_2:55879976-55879995 Msa1256120:intron 25.0%
!! ACTAAATCTGTATTTGAAGT+GGG - chr8_2:55879977-55879996 Msa1256120:intron 25.0%
! CTAAAAAGAAATTTATGGTG+TGG + chr8_2:55880052-55880071 None:intergenic 25.0%
! ATGCATTACTATCTTAAAAG+CGG + chr8_2:55880094-55880113 None:intergenic 25.0%
! TAGTAATGCATTTAATACCA+TGG - chr8_2:55880103-55880122 Msa1256120:intron 25.0%
!! TTTTTCTGTGTATCTATGTT+TGG - chr8_2:55880209-55880228 Msa1256120:intron 25.0%
! TGATAGATTTATCATTCAAG+CGG - chr8_2:55880246-55880265 Msa1256120:intron 25.0%
! TGGTAATAATTGAGATCTAA+TGG + chr8_2:55880379-55880398 None:intergenic 25.0%
! TCAAAGATCTATTAAAGTGA+TGG - chr8_2:55880536-55880555 Msa1256120:CDS 25.0%
! ACCATTGACATTGAATATTA+TGG - chr8_2:55880635-55880654 Msa1256120:CDS 25.0%
! ACCATAATATTCAATGTCAA+TGG + chr8_2:55880639-55880658 None:intergenic 25.0%
!! TCAATTTTCTTGTTGAATCT+TGG + chr8_2:55880699-55880718 None:intergenic 25.0%
! GTTCTATTTCAACTTCAAAT+AGG - chr8_2:55881021-55881040 Msa1256120:five_prime_UTR 25.0%
! AGAGTTATTGTTAGTGTAAT+TGG + chr8_2:55879049-55879068 None:intergenic 25.0%
! ACATCATTCAATGAAATCAT+AGG + chr8_2:55879806-55879825 None:intergenic 25.0%
! CAGATTTAGTATCATTAATG+TGG + chr8_2:55879967-55879986 None:intergenic 25.0%
! TACTAAATCTGTATTTGAAG+TGG - chr8_2:55879976-55879995 Msa1256120:intron 25.0%
!! ACTAAATCTGTATTTGAAGT+GGG - chr8_2:55879977-55879996 Msa1256120:intron 25.0%
! CTAAAAAGAAATTTATGGTG+TGG + chr8_2:55880052-55880071 None:intergenic 25.0%
! ATGCATTACTATCTTAAAAG+CGG + chr8_2:55880094-55880113 None:intergenic 25.0%
! TAGTAATGCATTTAATACCA+TGG - chr8_2:55880103-55880122 Msa1256120:intron 25.0%
!! TTTTTCTGTGTATCTATGTT+TGG - chr8_2:55880209-55880228 Msa1256120:intron 25.0%
! TGATAGATTTATCATTCAAG+CGG - chr8_2:55880246-55880265 Msa1256120:intron 25.0%
! TGGTAATAATTGAGATCTAA+TGG + chr8_2:55880379-55880398 None:intergenic 25.0%
! TCAAAGATCTATTAAAGTGA+TGG - chr8_2:55880536-55880555 Msa1256120:CDS 25.0%
! ACCATTGACATTGAATATTA+TGG - chr8_2:55880635-55880654 Msa1256120:CDS 25.0%
! ACCATAATATTCAATGTCAA+TGG + chr8_2:55880639-55880658 None:intergenic 25.0%
!! TCAATTTTCTTGTTGAATCT+TGG + chr8_2:55880699-55880718 None:intergenic 25.0%
! GTTCTATTTCAACTTCAAAT+AGG - chr8_2:55881021-55881040 Msa1256120:five_prime_UTR 25.0%
! TTGTTGATGAAGTTTGAGTT+TGG + chr8_2:55879089-55879108 None:intergenic 30.0%
TAACATTGTAATGTTGTTGG+TGG + chr8_2:55879127-55879146 None:intergenic 30.0%
TTTAATGCCATTGAAGAAGA+AGG - chr8_2:55879453-55879472 Msa1256120:CDS 30.0%
AAGAAACAAACAACAAAAGC+AGG + chr8_2:55879534-55879553 None:intergenic 30.0%
! TGTTTTCTCTCTCATTCTTT+GGG - chr8_2:55879566-55879585 Msa1256120:intron 30.0%
GAGAAATACCTTGAGAAAAA+TGG + chr8_2:55879616-55879635 None:intergenic 30.0%
TTTAGATTCACAGAATGACA+CGG - chr8_2:55879672-55879691 Msa1256120:CDS 30.0%
TTCAATGAAATCATAGGTGT+CGG + chr8_2:55879800-55879819 None:intergenic 30.0%
AAAGTTGTCACAATTGTCTT+TGG - chr8_2:55879905-55879924 Msa1256120:intron 30.0%
TGCATTACTATCTTAAAAGC+GGG + chr8_2:55880093-55880112 None:intergenic 30.0%
!!! AATACCATGGTTTTTAAAGC+AGG - chr8_2:55880116-55880135 Msa1256120:intron 30.0%
!! TATACCTGCTTTAAAAACCA+TGG + chr8_2:55880123-55880142 None:intergenic 30.0%
GATAGATTTATCATTCAAGC+GGG - chr8_2:55880247-55880266 Msa1256120:intron 30.0%
!!! TCTATATGTCATTTTCACAG+TGG + chr8_2:55880317-55880336 None:intergenic 30.0%
!!! AGAAACACTGCAACATTTTT+TGG - chr8_2:55880334-55880353 Msa1256120:intron 30.0%
!!! GAAACACTGCAACATTTTTT+GGG - chr8_2:55880335-55880354 Msa1256120:intron 30.0%
!!! AAACACTGCAACATTTTTTG+GGG - chr8_2:55880336-55880355 Msa1256120:intron 30.0%
! TCTATTAAAGTGATGGTGAA+AGG - chr8_2:55880543-55880562 Msa1256120:CDS 30.0%
ATATTCAATGTCAATGGTAC+CGG + chr8_2:55880633-55880652 None:intergenic 30.0%
TGACATTGAATATTATGGTG+AGG - chr8_2:55880640-55880659 Msa1256120:CDS 30.0%
AGGTCAAAAGCTTATGTATT+AGG - chr8_2:55880660-55880679 Msa1256120:CDS 30.0%
GGTCAAAAGCTTATGTATTA+GGG - chr8_2:55880661-55880680 Msa1256120:CDS 30.0%
GTCAAAAGCTTATGTATTAG+GGG - chr8_2:55880662-55880681 Msa1256120:CDS 30.0%
!! AATTGAGTGTGCATTGATTA+TGG - chr8_2:55880713-55880732 Msa1256120:CDS 30.0%
ATTATGGATCCGAAGAAAAT+GGG - chr8_2:55880729-55880748 Msa1256120:CDS 30.0%
TCATTTATTACTTCCACGTA+TGG + chr8_2:55880809-55880828 None:intergenic 30.0%
TGTAGTAATTTAAAGGGGTT+TGG - chr8_2:55880851-55880870 Msa1256120:CDS 30.0%
GTAGTAATTTAAAGGGGTTT+GGG - chr8_2:55880852-55880871 Msa1256120:CDS 30.0%
TAGTAATTTAAAGGGGTTTG+GGG - chr8_2:55880853-55880872 Msa1256120:CDS 30.0%
! ATTAGCACATGAGTTTTCTT+TGG - chr8_2:55880901-55880920 Msa1256120:five_prime_UTR 30.0%
! TGTAATTTAGATTTTGTCGG+TGG - chr8_2:55880999-55881018 Msa1256120:five_prime_UTR 30.0%
! TTGTTGATGAAGTTTGAGTT+TGG + chr8_2:55879089-55879108 None:intergenic 30.0%
TAACATTGTAATGTTGTTGG+TGG + chr8_2:55879127-55879146 None:intergenic 30.0%
TTTAATGCCATTGAAGAAGA+AGG - chr8_2:55879453-55879472 Msa1256120:CDS 30.0%
AAGAAACAAACAACAAAAGC+AGG + chr8_2:55879534-55879553 None:intergenic 30.0%
! TGTTTTCTCTCTCATTCTTT+GGG - chr8_2:55879566-55879585 Msa1256120:intron 30.0%
GAGAAATACCTTGAGAAAAA+TGG + chr8_2:55879616-55879635 None:intergenic 30.0%
TTTAGATTCACAGAATGACA+CGG - chr8_2:55879672-55879691 Msa1256120:CDS 30.0%
TTCAATGAAATCATAGGTGT+CGG + chr8_2:55879800-55879819 None:intergenic 30.0%
AAAGTTGTCACAATTGTCTT+TGG - chr8_2:55879905-55879924 Msa1256120:intron 30.0%
TGCATTACTATCTTAAAAGC+GGG + chr8_2:55880093-55880112 None:intergenic 30.0%
!!! AATACCATGGTTTTTAAAGC+AGG - chr8_2:55880116-55880135 Msa1256120:intron 30.0%
!! TATACCTGCTTTAAAAACCA+TGG + chr8_2:55880123-55880142 None:intergenic 30.0%
GATAGATTTATCATTCAAGC+GGG - chr8_2:55880247-55880266 Msa1256120:intron 30.0%
!!! TCTATATGTCATTTTCACAG+TGG + chr8_2:55880317-55880336 None:intergenic 30.0%
!!! AGAAACACTGCAACATTTTT+TGG - chr8_2:55880334-55880353 Msa1256120:intron 30.0%
!!! GAAACACTGCAACATTTTTT+GGG - chr8_2:55880335-55880354 Msa1256120:intron 30.0%
!!! AAACACTGCAACATTTTTTG+GGG - chr8_2:55880336-55880355 Msa1256120:intron 30.0%
! TCTATTAAAGTGATGGTGAA+AGG - chr8_2:55880543-55880562 Msa1256120:CDS 30.0%
ATATTCAATGTCAATGGTAC+CGG + chr8_2:55880633-55880652 None:intergenic 30.0%
TGACATTGAATATTATGGTG+AGG - chr8_2:55880640-55880659 Msa1256120:CDS 30.0%
AGGTCAAAAGCTTATGTATT+AGG - chr8_2:55880660-55880679 Msa1256120:CDS 30.0%
GGTCAAAAGCTTATGTATTA+GGG - chr8_2:55880661-55880680 Msa1256120:CDS 30.0%
GTCAAAAGCTTATGTATTAG+GGG - chr8_2:55880662-55880681 Msa1256120:CDS 30.0%
!! AATTGAGTGTGCATTGATTA+TGG - chr8_2:55880713-55880732 Msa1256120:CDS 30.0%
ATTATGGATCCGAAGAAAAT+GGG - chr8_2:55880729-55880748 Msa1256120:CDS 30.0%
TCATTTATTACTTCCACGTA+TGG + chr8_2:55880809-55880828 None:intergenic 30.0%
TGTAGTAATTTAAAGGGGTT+TGG - chr8_2:55880851-55880870 Msa1256120:CDS 30.0%
GTAGTAATTTAAAGGGGTTT+GGG - chr8_2:55880852-55880871 Msa1256120:CDS 30.0%
TAGTAATTTAAAGGGGTTTG+GGG - chr8_2:55880853-55880872 Msa1256120:CDS 30.0%
! ATTAGCACATGAGTTTTCTT+TGG - chr8_2:55880901-55880920 Msa1256120:five_prime_UTR 30.0%
! TGTAATTTAGATTTTGTCGG+TGG - chr8_2:55880999-55881018 Msa1256120:five_prime_UTR 30.0%
TATCATGTTTGATGAGTGAG+TGG + chr8_2:55879018-55879037 None:intergenic 35.0%
GGCTAACATTGTAATGTTGT+TGG + chr8_2:55879130-55879149 None:intergenic 35.0%
CCAATTACCTTTCCTGTTAT+GGG + chr8_2:55879415-55879434 None:intergenic 35.0%
AAGAAGTCCTTCTTCTTCAA+TGG + chr8_2:55879463-55879482 None:intergenic 35.0%
! CTGTTTTCTCTCTCATTCTT+TGG - chr8_2:55879565-55879584 Msa1256120:intron 35.0%
! GAAAAATGGCAGGTTTTTGA+GGG + chr8_2:55879602-55879621 None:intergenic 35.0%
! AGAAAAATGGCAGGTTTTTG+AGG + chr8_2:55879603-55879622 None:intergenic 35.0%
!!! AAAACCTGCCATTTTTCTCA+AGG - chr8_2:55879605-55879624 Msa1256120:CDS 35.0%
AATACCTTGAGAAAAATGGC+AGG + chr8_2:55879612-55879631 None:intergenic 35.0%
GAATTGACAGTTAGGAAACA+CGG + chr8_2:55879880-55879899 None:intergenic 35.0%
! CATTTTCACAGTGGAATTCA+TGG + chr8_2:55880308-55880327 None:intergenic 35.0%
GGAAGTCATATTCCACTATA+TGG - chr8_2:55880564-55880583 Msa1256120:CDS 35.0%
AGTCATATTCCACTATATGG+AGG - chr8_2:55880567-55880586 Msa1256120:CDS 35.0%
GTCATATTCCACTATATGGA+GGG - chr8_2:55880568-55880587 Msa1256120:CDS 35.0%
TCATATTCCACTATATGGAG+GGG - chr8_2:55880569-55880588 Msa1256120:CDS 35.0%
GATTATGGATCCGAAGAAAA+TGG - chr8_2:55880728-55880747 Msa1256120:CDS 35.0%
! ATAGGCTTACCCATTTTCTT+CGG + chr8_2:55880741-55880760 None:intergenic 35.0%
TAACTCATACGTACACTTGT+TGG + chr8_2:55880772-55880791 None:intergenic 35.0%
TATCATGTTTGATGAGTGAG+TGG + chr8_2:55879018-55879037 None:intergenic 35.0%
GGCTAACATTGTAATGTTGT+TGG + chr8_2:55879130-55879149 None:intergenic 35.0%
CCAATTACCTTTCCTGTTAT+GGG + chr8_2:55879415-55879434 None:intergenic 35.0%
AAGAAGTCCTTCTTCTTCAA+TGG + chr8_2:55879463-55879482 None:intergenic 35.0%
! CTGTTTTCTCTCTCATTCTT+TGG - chr8_2:55879565-55879584 Msa1256120:intron 35.0%
! GAAAAATGGCAGGTTTTTGA+GGG + chr8_2:55879602-55879621 None:intergenic 35.0%
! AGAAAAATGGCAGGTTTTTG+AGG + chr8_2:55879603-55879622 None:intergenic 35.0%
!!! AAAACCTGCCATTTTTCTCA+AGG - chr8_2:55879605-55879624 Msa1256120:CDS 35.0%
AATACCTTGAGAAAAATGGC+AGG + chr8_2:55879612-55879631 None:intergenic 35.0%
GAATTGACAGTTAGGAAACA+CGG + chr8_2:55879880-55879899 None:intergenic 35.0%
! CATTTTCACAGTGGAATTCA+TGG + chr8_2:55880308-55880327 None:intergenic 35.0%
GGAAGTCATATTCCACTATA+TGG - chr8_2:55880564-55880583 Msa1256120:CDS 35.0%
AGTCATATTCCACTATATGG+AGG - chr8_2:55880567-55880586 Msa1256120:CDS 35.0%
GTCATATTCCACTATATGGA+GGG - chr8_2:55880568-55880587 Msa1256120:CDS 35.0%
TCATATTCCACTATATGGAG+GGG - chr8_2:55880569-55880588 Msa1256120:CDS 35.0%
GATTATGGATCCGAAGAAAA+TGG - chr8_2:55880728-55880747 Msa1256120:CDS 35.0%
! ATAGGCTTACCCATTTTCTT+CGG + chr8_2:55880741-55880760 None:intergenic 35.0%
TAACTCATACGTACACTTGT+TGG + chr8_2:55880772-55880791 None:intergenic 35.0%
ATCTGCATAGCGTAAGTGTT+GGG + chr8_2:55878985-55879004 None:intergenic 40.0%
AATCTGCATAGCGTAAGTGT+TGG + chr8_2:55878986-55879005 None:intergenic 40.0%
!!! ATGTTGTTGGTGGTGTTTTC+TGG + chr8_2:55879117-55879136 None:intergenic 40.0%
! TTGAAGTGGGCTTGAGTTAA+AGG + chr8_2:55879283-55879302 None:intergenic 40.0%
! GATGAGTTGGAATGAGAATG+AGG + chr8_2:55879324-55879343 None:intergenic 40.0%
TTCTCATTCCAACTCATCGT+TGG - chr8_2:55879326-55879345 Msa1256120:CDS 40.0%
TCTCATTCCAACTCATCGTT+GGG - chr8_2:55879327-55879346 Msa1256120:CDS 40.0%
AGGAAGATTCACGTGAATGT+GGG + chr8_2:55879353-55879372 None:intergenic 40.0%
CCCATAACAGGAAAGGTAAT+TGG - chr8_2:55879412-55879431 Msa1256120:CDS 40.0%
GCCAATTACCTTTCCTGTTA+TGG + chr8_2:55879416-55879435 None:intergenic 40.0%
GCATTAAACTGATCCTTCCA+AGG + chr8_2:55879441-55879460 None:intergenic 40.0%
CAGGAAAATAGCATCTCCTA+GGG + chr8_2:55879515-55879534 None:intergenic 40.0%
!! GAAATCATAGGTGTCGGTAT+CGG + chr8_2:55879794-55879813 None:intergenic 40.0%
! ATCTGTATTTGAAGTGGGCA+TGG - chr8_2:55879982-55880001 Msa1256120:intron 40.0%
! CTCTCATGTGAAGTTTTCAC+CGG - chr8_2:55880008-55880027 Msa1256120:intron 40.0%
ATTTATCATTCAAGCGGGTG+CGG - chr8_2:55880252-55880271 Msa1256120:intron 40.0%
!! CTAATGGAGTTGATGCAACA+TGG + chr8_2:55880363-55880382 None:intergenic 40.0%
TACCAACTTACACTAGCAAC+TGG - chr8_2:55880394-55880413 Msa1256120:CDS 40.0%
TTCCAGTTGCTAGTGTAAGT+TGG + chr8_2:55880399-55880418 None:intergenic 40.0%
CATATTCCACTATATGGAGG+GGG - chr8_2:55880570-55880589 Msa1256120:CDS 40.0%
GCAAGATTGAACACTGTCAA+TGG - chr8_2:55880594-55880613 Msa1256120:CDS 40.0%
! AGCTTATGTATTAGGGGCAT+TGG - chr8_2:55880668-55880687 Msa1256120:CDS 40.0%
! CACTTGTTGGTAAGTCGAAT+AGG + chr8_2:55880759-55880778 None:intergenic 40.0%
ATCTGCATAGCGTAAGTGTT+GGG + chr8_2:55878985-55879004 None:intergenic 40.0%
AATCTGCATAGCGTAAGTGT+TGG + chr8_2:55878986-55879005 None:intergenic 40.0%
!!! ATGTTGTTGGTGGTGTTTTC+TGG + chr8_2:55879117-55879136 None:intergenic 40.0%
! TTGAAGTGGGCTTGAGTTAA+AGG + chr8_2:55879283-55879302 None:intergenic 40.0%
! GATGAGTTGGAATGAGAATG+AGG + chr8_2:55879324-55879343 None:intergenic 40.0%
TTCTCATTCCAACTCATCGT+TGG - chr8_2:55879326-55879345 Msa1256120:CDS 40.0%
TCTCATTCCAACTCATCGTT+GGG - chr8_2:55879327-55879346 Msa1256120:CDS 40.0%
AGGAAGATTCACGTGAATGT+GGG + chr8_2:55879353-55879372 None:intergenic 40.0%
CCCATAACAGGAAAGGTAAT+TGG - chr8_2:55879412-55879431 Msa1256120:CDS 40.0%
GCCAATTACCTTTCCTGTTA+TGG + chr8_2:55879416-55879435 None:intergenic 40.0%
GCATTAAACTGATCCTTCCA+AGG + chr8_2:55879441-55879460 None:intergenic 40.0%
CAGGAAAATAGCATCTCCTA+GGG + chr8_2:55879515-55879534 None:intergenic 40.0%
!! GAAATCATAGGTGTCGGTAT+CGG + chr8_2:55879794-55879813 None:intergenic 40.0%
! ATCTGTATTTGAAGTGGGCA+TGG - chr8_2:55879982-55880001 Msa1256120:intron 40.0%
! CTCTCATGTGAAGTTTTCAC+CGG - chr8_2:55880008-55880027 Msa1256120:intron 40.0%
ATTTATCATTCAAGCGGGTG+CGG - chr8_2:55880252-55880271 Msa1256120:intron 40.0%
!! CTAATGGAGTTGATGCAACA+TGG + chr8_2:55880363-55880382 None:intergenic 40.0%
TACCAACTTACACTAGCAAC+TGG - chr8_2:55880394-55880413 Msa1256120:CDS 40.0%
TTCCAGTTGCTAGTGTAAGT+TGG + chr8_2:55880399-55880418 None:intergenic 40.0%
CATATTCCACTATATGGAGG+GGG - chr8_2:55880570-55880589 Msa1256120:CDS 40.0%
GCAAGATTGAACACTGTCAA+TGG - chr8_2:55880594-55880613 Msa1256120:CDS 40.0%
! AGCTTATGTATTAGGGGCAT+TGG - chr8_2:55880668-55880687 Msa1256120:CDS 40.0%
! CACTTGTTGGTAAGTCGAAT+AGG + chr8_2:55880759-55880778 None:intergenic 40.0%
! TCTGCATAGCGTAAGTGTTG+GGG + chr8_2:55878984-55879003 None:intergenic 45.0%
TTGTGTTAGGCTGCTTACCT+CGG + chr8_2:55879163-55879182 None:intergenic 45.0%
TTGTCGGTGAGGATTGTGTT+AGG + chr8_2:55879176-55879195 None:intergenic 45.0%
!!! TGTTGTTTTCTCACCGTCGT+TGG + chr8_2:55879256-55879275 None:intergenic 45.0%
GAGTTGGAATGAGAATGAGG+AGG + chr8_2:55879321-55879340 None:intergenic 45.0%
GAGGAAGATTCACGTGAATG+TGG + chr8_2:55879354-55879373 None:intergenic 45.0%
CAAGCTTCCCATAACAGGAA+AGG - chr8_2:55879405-55879424 Msa1256120:CDS 45.0%
! GATGATGATGATGCAGATCG+TGG - chr8_2:55879486-55879505 Msa1256120:intron 45.0%
GCAGGAAAATAGCATCTCCT+AGG + chr8_2:55879516-55879535 None:intergenic 45.0%
! TCATGTGAAGTTTTCACCGG+AGG - chr8_2:55880011-55880030 Msa1256120:intron 45.0%
TTTATGGTGTGGATGTGCAC+TGG + chr8_2:55880041-55880060 None:intergenic 45.0%
ACTATCTTAAAAGCGGGCAG+AGG + chr8_2:55880087-55880106 None:intergenic 45.0%
ATTCATGGACACCATGCTAG+TGG + chr8_2:55880293-55880312 None:intergenic 45.0%
GAACACTGTCAATGGTTCAC+CGG - chr8_2:55880602-55880621 Msa1256120:CDS 45.0%
AGACTCGATCATACCATACG+TGG - chr8_2:55880793-55880812 Msa1256120:CDS 45.0%
! TCTGCATAGCGTAAGTGTTG+GGG + chr8_2:55878984-55879003 None:intergenic 45.0%
TTGTGTTAGGCTGCTTACCT+CGG + chr8_2:55879163-55879182 None:intergenic 45.0%
TTGTCGGTGAGGATTGTGTT+AGG + chr8_2:55879176-55879195 None:intergenic 45.0%
!!! TGTTGTTTTCTCACCGTCGT+TGG + chr8_2:55879256-55879275 None:intergenic 45.0%
GAGTTGGAATGAGAATGAGG+AGG + chr8_2:55879321-55879340 None:intergenic 45.0%
GAGGAAGATTCACGTGAATG+TGG + chr8_2:55879354-55879373 None:intergenic 45.0%
CAAGCTTCCCATAACAGGAA+AGG - chr8_2:55879405-55879424 Msa1256120:CDS 45.0%
! GATGATGATGATGCAGATCG+TGG - chr8_2:55879486-55879505 Msa1256120:intron 45.0%
GCAGGAAAATAGCATCTCCT+AGG + chr8_2:55879516-55879535 None:intergenic 45.0%
! TCATGTGAAGTTTTCACCGG+AGG - chr8_2:55880011-55880030 Msa1256120:intron 45.0%
TTTATGGTGTGGATGTGCAC+TGG + chr8_2:55880041-55880060 None:intergenic 45.0%
ACTATCTTAAAAGCGGGCAG+AGG + chr8_2:55880087-55880106 None:intergenic 45.0%
ATTCATGGACACCATGCTAG+TGG + chr8_2:55880293-55880312 None:intergenic 45.0%
GAACACTGTCAATGGTTCAC+CGG - chr8_2:55880602-55880621 Msa1256120:CDS 45.0%
AGACTCGATCATACCATACG+TGG - chr8_2:55880793-55880812 Msa1256120:CDS 45.0%
!! AAAAAGAAAAATTAAATAAA+AGG + chr8_2:55880194-55880213 None:intergenic 5.0%
!! AAAAAGAAAAATTAAATAAA+AGG + chr8_2:55880194-55880213 None:intergenic 5.0%
ATCACGTGATCTTGTCGGTG+AGG + chr8_2:55879187-55879206 None:intergenic 50.0%
TCACCGACAAGATCACGTGA+TGG - chr8_2:55879186-55879205 Msa1256120:exon 50.0%
CACCGACAAGATCACGTGAT+GGG - chr8_2:55879187-55879206 Msa1256120:exon 50.0%
AGCCCATCACGTGATCTTGT+CGG + chr8_2:55879192-55879211 None:intergenic 50.0%
!! ATCCCAACGGGCTTTGAAGT+GGG + chr8_2:55879296-55879315 None:intergenic 50.0%
AATGAGGAGGAGATCCCAAC+GGG + chr8_2:55879308-55879327 None:intergenic 50.0%
GAATGAGGAGGAGATCCCAA+CGG + chr8_2:55879309-55879328 None:intergenic 50.0%
AGCTTGACTGCTCTTACGTG+AGG + chr8_2:55879391-55879410 None:intergenic 50.0%
GCAGTCAAGCTTCCCATAAC+AGG - chr8_2:55879400-55879419 Msa1256120:CDS 50.0%
GGAAAGGTAATTGGCGTCCT+TGG - chr8_2:55879421-55879440 Msa1256120:CDS 50.0%
AGGTAATTGGCGTCCTTGGA+AGG - chr8_2:55879425-55879444 Msa1256120:CDS 50.0%
ATGCAGATCGTGGATTCCCT+AGG - chr8_2:55879496-55879515 Msa1256120:intron 50.0%
CACCGTCACTCTATTTGTCC+CGG - chr8_2:55879759-55879778 Msa1256120:intron 50.0%
CACCGGGACAAATAGAGTGA+CGG + chr8_2:55879764-55879783 None:intergenic 50.0%
! TGTGAAGTTTTCACCGGAGG+AGG - chr8_2:55880014-55880033 Msa1256120:intron 50.0%
! CAATGGTTCACCGGTTGAAC+CGG - chr8_2:55880611-55880630 Msa1256120:CDS 50.0%
!! GTCAATGGTACCGGTTCAAC+CGG + chr8_2:55880624-55880643 None:intergenic 50.0%
ATCACGTGATCTTGTCGGTG+AGG + chr8_2:55879187-55879206 None:intergenic 50.0%
TCACCGACAAGATCACGTGA+TGG - chr8_2:55879186-55879205 Msa1256120:exon 50.0%
CACCGACAAGATCACGTGAT+GGG - chr8_2:55879187-55879206 Msa1256120:exon 50.0%
AGCCCATCACGTGATCTTGT+CGG + chr8_2:55879192-55879211 None:intergenic 50.0%
!! ATCCCAACGGGCTTTGAAGT+GGG + chr8_2:55879296-55879315 None:intergenic 50.0%
AATGAGGAGGAGATCCCAAC+GGG + chr8_2:55879308-55879327 None:intergenic 50.0%
GAATGAGGAGGAGATCCCAA+CGG + chr8_2:55879309-55879328 None:intergenic 50.0%
AGCTTGACTGCTCTTACGTG+AGG + chr8_2:55879391-55879410 None:intergenic 50.0%
GCAGTCAAGCTTCCCATAAC+AGG - chr8_2:55879400-55879419 Msa1256120:CDS 50.0%
GGAAAGGTAATTGGCGTCCT+TGG - chr8_2:55879421-55879440 Msa1256120:CDS 50.0%
AGGTAATTGGCGTCCTTGGA+AGG - chr8_2:55879425-55879444 Msa1256120:CDS 50.0%
ATGCAGATCGTGGATTCCCT+AGG - chr8_2:55879496-55879515 Msa1256120:intron 50.0%
CACCGTCACTCTATTTGTCC+CGG - chr8_2:55879759-55879778 Msa1256120:intron 50.0%
CACCGGGACAAATAGAGTGA+CGG + chr8_2:55879764-55879783 None:intergenic 50.0%
! TGTGAAGTTTTCACCGGAGG+AGG - chr8_2:55880014-55880033 Msa1256120:intron 50.0%
! CAATGGTTCACCGGTTGAAC+CGG - chr8_2:55880611-55880630 Msa1256120:CDS 50.0%
!! GTCAATGGTACCGGTTCAAC+CGG + chr8_2:55880624-55880643 None:intergenic 50.0%
!! CGTAAGTGTTGGGGCATGCA+AGG + chr8_2:55878975-55878994 None:intergenic 55.0%
GTTAGCCAAGACAGACTCCG+AGG - chr8_2:55879143-55879162 Msa1256120:three_prime_UTR 55.0%
GCTTACCTCGGAGTCTGTCT+TGG + chr8_2:55879151-55879170 None:intergenic 55.0%
CGTTGGAAGAGTCGCGTGAT+GGG + chr8_2:55879239-55879258 None:intergenic 55.0%
TCGTTGGAAGAGTCGCGTGA+TGG + chr8_2:55879240-55879259 None:intergenic 55.0%
TCACGCGACTCTTCCAACGA+CGG - chr8_2:55879240-55879259 Msa1256120:CDS 55.0%
AAGCCCACTTCAAAGCCCGT+TGG - chr8_2:55879290-55879309 Msa1256120:CDS 55.0%
AGCCCACTTCAAAGCCCGTT+GGG - chr8_2:55879291-55879310 Msa1256120:CDS 55.0%
!! GATCCCAACGGGCTTTGAAG+TGG + chr8_2:55879297-55879316 None:intergenic 55.0%
ATGTGGGCCCAACGATGAGT+TGG + chr8_2:55879337-55879356 None:intergenic 55.0%
! TGAGGCAGAGTATCTCGTGG+AGG + chr8_2:55879373-55879392 None:intergenic 55.0%
! ACGTGAGGCAGAGTATCTCG+TGG + chr8_2:55879376-55879395 None:intergenic 55.0%
! TCGGTATCGGACACAGACAC+CGG + chr8_2:55879781-55879800 None:intergenic 55.0%
GTCAGGAGTTGCCACTAGCA+TGG - chr8_2:55880279-55880298 Msa1256120:intron 55.0%
CTTGCTCCCCCTCCATATAG+TGG + chr8_2:55880579-55880598 None:intergenic 55.0%
!! CGTAAGTGTTGGGGCATGCA+AGG + chr8_2:55878975-55878994 None:intergenic 55.0%
GTTAGCCAAGACAGACTCCG+AGG - chr8_2:55879143-55879162 Msa1256120:three_prime_UTR 55.0%
GCTTACCTCGGAGTCTGTCT+TGG + chr8_2:55879151-55879170 None:intergenic 55.0%
CGTTGGAAGAGTCGCGTGAT+GGG + chr8_2:55879239-55879258 None:intergenic 55.0%
TCGTTGGAAGAGTCGCGTGA+TGG + chr8_2:55879240-55879259 None:intergenic 55.0%
TCACGCGACTCTTCCAACGA+CGG - chr8_2:55879240-55879259 Msa1256120:CDS 55.0%
AAGCCCACTTCAAAGCCCGT+TGG - chr8_2:55879290-55879309 Msa1256120:CDS 55.0%
AGCCCACTTCAAAGCCCGTT+GGG - chr8_2:55879291-55879310 Msa1256120:CDS 55.0%
!! GATCCCAACGGGCTTTGAAG+TGG + chr8_2:55879297-55879316 None:intergenic 55.0%
ATGTGGGCCCAACGATGAGT+TGG + chr8_2:55879337-55879356 None:intergenic 55.0%
! TGAGGCAGAGTATCTCGTGG+AGG + chr8_2:55879373-55879392 None:intergenic 55.0%
! ACGTGAGGCAGAGTATCTCG+TGG + chr8_2:55879376-55879395 None:intergenic 55.0%
! TCGGTATCGGACACAGACAC+CGG + chr8_2:55879781-55879800 None:intergenic 55.0%
GTCAGGAGTTGCCACTAGCA+TGG - chr8_2:55880279-55880298 Msa1256120:intron 55.0%
CTTGCTCCCCCTCCATATAG+TGG + chr8_2:55880579-55880598 None:intergenic 55.0%
GGGCATGCAAGGACAGCTAG+TGG + chr8_2:55878964-55878983 None:intergenic 60.0%
! CGGTATCGGACACAGACACC+GGG + chr8_2:55879780-55879799 None:intergenic 60.0%
GATGTGCACTGGACCTCCTC+CGG + chr8_2:55880030-55880049 None:intergenic 60.0%
CAAGCGGGTGCGGATTTGTC+AGG - chr8_2:55880262-55880281 Msa1256120:intron 60.0%
GGGCATGCAAGGACAGCTAG+TGG + chr8_2:55878964-55878983 None:intergenic 60.0%
! CGGTATCGGACACAGACACC+GGG + chr8_2:55879780-55879799 None:intergenic 60.0%
GATGTGCACTGGACCTCCTC+CGG + chr8_2:55880030-55880049 None:intergenic 60.0%
CAAGCGGGTGCGGATTTGTC+AGG - chr8_2:55880262-55880281 Msa1256120:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 55878935 55881052 55878935 ID=Msa1256120;Name=Msa1256120
chr8_2 mRNA 55878935 55881052 55878935 ID=Msa1256120-mRNA-1;Parent=Msa1256120;Name=Msa1256120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=173|1|1|1|1|1|3|258|330
chr8_2 exon 55878935 55879480 55878935 ID=Msa1256120-mRNA-1:exon:17218;Parent=Msa1256120-mRNA-1
chr8_2 exon 55879567 55879752 55879567 ID=Msa1256120-mRNA-1:exon:17217;Parent=Msa1256120-mRNA-1
chr8_2 exon 55880361 55881052 55880361 ID=Msa1256120-mRNA-1:exon:17216;Parent=Msa1256120-mRNA-1
chr8_2 five_prime_UTR 55880880 55881052 55880880 ID=Msa1256120-mRNA-1:five_prime_utr;Parent=Msa1256120-mRNA-1
chr8_2 CDS 55880361 55880879 55880361 ID=Msa1256120-mRNA-1:cds;Parent=Msa1256120-mRNA-1
chr8_2 CDS 55879567 55879752 55879567 ID=Msa1256120-mRNA-1:cds;Parent=Msa1256120-mRNA-1
chr8_2 CDS 55879193 55879480 55879193 ID=Msa1256120-mRNA-1:cds;Parent=Msa1256120-mRNA-1
chr8_2 three_prime_UTR 55878935 55879192 55878935 ID=Msa1256120-mRNA-1:three_prime_utr;Parent=Msa1256120-mRNA-1
Gene Sequence

>Msa1256120

ATGAAACCAGAAAACACCACCAACAACATTACAATGTTAGCCAAGACAGACTCCGAGGTAAGCAGCCTAACACAATCCTCACCGACAAGATCACGTGATGGGCTTCGTGCAGTTTACTACGTACAAAGCCCATCACGCGACTCTTCCAACGACGGTGAGAAAACAACAAACTCCTTTAACTCAAGCCCACTTCAAAGCCCGTTGGGATCTCCTCCTCATTCTCATTCCAACTCATCGTTGGGCCCACATTCACGTGAATCTTCCTCCACGAGATACTCTGCCTCACGTAAGAGCAGTCAAGCTTCCCATAACAGGAAAGGTAATTGGCGTCCTTGGAAGGATCAGTTTAATGCCATTGAAGAAGAAGGACTTCTTGATGATGATGATGATGCAGATCGTGGATTCCCTAGGAGATGCTATTTTCCTGCTTTTGTTGTTTGTTTCTTTGTTCTCTTCACTGTTTTCTCTCTCATTCTTTGGGCTGCAAGTCGCCCTCAAAAACCTGCCATTTTTCTCAAGAGTATAACATTTGATAGATTTATCATTCAAGCGGGTGCGGATTTGTCAGGAGTTGCCACTAGCATGGTGTCCATGAATTCCACTGTGAAAATGACATATAGAAACACTGCAACATTTTTTGGGGTCCATGTTGCATCAACTCCATTAGATCTCAATTATTACCAACTTACACTAGCAACTGGAAATATGCCTAAGTTTTATCAATCAAGAAAAAGTCAAAGATCTATTAAAGTGATGGTGAAAGGAAGTCATATTCCACTATATGGAGGGGGAGCAAGATTGAACACTGTCAATGGTTCACCGGTTGAACCGGTACCATTGACATTGAATATTATGGTGAGGTCAAAAGCTTATGTATTAGGGGCATTGGTGAAGCCAAGATTCAACAAGAAAATTGAGTGTGCATTGATTATGGATCCGAAGAAAATGGGTAAGCCTATTCGACTTACCAACAAGTGTACGTATGAGTTATAG
Protein sequence

>Msa1256120

MKPENTTNNITMLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSPPHSHSNSSLGPHSRESSSTRYSASRKSSQASHNRKGNWRPWKDQFNAIEEEGLLDDDDDADRGFPRRCYFPAFVVCFFVLFTVFSLILWAASRPQKPAIFLKSITFDRFIIQAGADLSGVATSMVSMNSTVKMTYRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVKGSHIPLYGGGARLNTVNGSPVEPVPLTLNIMVRSKAYVLGALVKPRFNKKIECALIMDPKKMGKPIRLTNKCTYEL*