AlfalfaGEDB | Msa0049450

M. sativa cultivar zhongmu-4 / Msa0049450

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0049450	XP_039688861.1	97.281	331	8	1	1	330	1	331	0.0	668

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0049450	A0A396IJ55	97.281	331	8	1	1	330	1	331	0.0	668

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006840	Msa0049450	0.836004	1.206159e-56	-8.615850e-47
Msa0018920	Msa0049450	0.802066	6.690953e-49	-8.615850e-47
Msa0040640	Msa0049450	0.809831	1.557437e-50	-8.615850e-47
Msa0045620	Msa0049450	0.800400	1.466967e-48	-8.615850e-47
Msa0049450	Msa0050530	0.828366	9.356750e-55	-8.615850e-47
Msa0049450	Msa0091350	0.832062	1.171336e-55	-8.615850e-47
Msa0049450	Msa0094180	0.812102	5.018871e-51	-8.615850e-47
Msa0049450	Msa0100600	0.821801	3.327636e-53	-8.615850e-47
Msa0049450	Msa0100890	0.833075	6.565846e-56	-8.615850e-47
Msa0049450	Msa0106630	0.802096	6.598233e-49	-8.615850e-47
Msa0049450	Msa0109730	0.805412	1.351699e-49	-8.615850e-47
Msa0049450	Msa0125590	0.814977	1.170287e-51	-8.615850e-47
Msa0049450	Msa0127340	0.825413	4.751579e-54	-8.615850e-47
Msa0049450	Msa0168380	0.800571	1.353939e-48	-8.615850e-47
Msa0049450	Msa0184700	0.818701	1.708160e-52	-8.615850e-47
Msa0049450	Msa0186560	0.806693	7.266383e-50	-8.615850e-47
Msa0049450	Msa0204970	0.828985	6.630064e-55	-8.615850e-47
Msa0049450	Msa0225800	0.802453	5.570967e-49	-8.615850e-47
Msa0049450	Msa0249870	0.828309	9.658376e-55	-8.615850e-47
Msa0049450	Msa0260570	0.800742	1.249452e-48	-8.615850e-47
Msa0049450	Msa0260630	0.828941	6.793003e-55	-8.615850e-47
Msa0049450	Msa0276730	0.800188	1.620169e-48	-8.615850e-47
Msa0049450	Msa0281540	0.824617	7.326102e-54	-8.615850e-47
Msa0049450	Msa0320580	0.824526	7.693696e-54	-8.615850e-47
Msa0049450	Msa0336520	0.805687	1.183335e-49	-8.615850e-47
Msa0049450	Msa0341680	0.803786	2.952381e-49	-8.615850e-47
Msa0049450	Msa0344110	0.826871	2.138488e-54	-8.615850e-47
Msa0049450	Msa0373170	0.818295	2.111892e-52	-8.615850e-47
Msa0049450	Msa0385730	0.805876	1.080344e-49	-8.615850e-47
Msa0049450	Msa0415820	0.805800	1.120637e-49	-8.615850e-47
Msa0049450	Msa0420430	0.838667	2.510192e-57	-8.615850e-47
Msa0049450	Msa0421750	0.826393	2.780684e-54	-8.615850e-47
Msa0049450	Msa0461550	0.804689	1.914405e-49	-8.615850e-47
Msa0049450	Msa0467690	0.819272	1.267401e-52	-8.615850e-47
Msa0049450	Msa0507810	0.800462	1.425057e-48	-8.615850e-47
Msa0049450	Msa0514020	0.822915	1.835110e-53	-8.615850e-47
Msa0049450	Msa0524430	0.805962	1.036203e-49	-8.615850e-47
Msa0049450	Msa0527850	0.815420	9.328279e-52	-8.615850e-47
Msa0049450	Msa0541740	0.801061	1.075471e-48	-8.615850e-47
Msa0049450	Msa0544410	0.820360	7.147460e-53	-8.615850e-47
Msa0049450	Msa0554300	0.827212	1.772262e-54	-8.615850e-47
Msa0049450	Msa0557850	0.800415	1.456581e-48	-8.615850e-47
Msa0049450	Msa0560570	0.842842	2.020228e-58	-8.615850e-47
Msa0049450	Msa0571350	0.806698	7.250797e-50	-8.615850e-47
Msa0049450	Msa0572830	0.835031	2.126111e-56	-8.615850e-47
Msa0049450	Msa0576330	0.821386	4.150496e-53	-8.615850e-47
Msa0049450	Msa0582460	0.806948	6.419678e-50	-8.615850e-47
Msa0049450	Msa0586200	0.809673	1.684228e-50	-8.615850e-47
Msa0049450	Msa0605520	0.811392	7.163294e-51	-8.615850e-47
Msa0049450	Msa0607330	0.813930	1.995058e-51	-8.615850e-47
Msa0049450	Msa0608350	0.808153	3.561327e-50	-8.615850e-47
Msa0049450	Msa0620500	0.817892	2.605653e-52	-8.615850e-47
Msa0049450	Msa0639190	0.818134	2.297263e-52	-8.615850e-47
Msa0049450	Msa0647440	0.820461	6.777425e-53	-8.615850e-47
Msa0049450	Msa0648760	0.812470	4.172527e-51	-8.615850e-47
Msa0049450	Msa0653160	0.807455	5.013738e-50	-8.615850e-47
Msa0049450	Msa0663290	0.804307	2.299920e-49	-8.615850e-47
Msa0049450	Msa0664070	0.810788	9.681634e-51	-8.615850e-47
Msa0049450	Msa0684750	0.840295	9.477174e-58	-8.615850e-47
Msa0049450	Msa0688620	0.817734	2.828602e-52	-8.615850e-47
Msa0049450	Msa0690320	0.830218	3.323432e-55	-8.615850e-47
Msa0049450	Msa0691270	0.809604	1.743441e-50	-8.615850e-47
Msa0049450	Msa0720280	0.825285	5.095185e-54	-8.615850e-47
Msa0049450	Msa0749190	0.813520	2.455778e-51	-8.615850e-47
Msa0049450	Msa0750520	0.816210	6.219047e-52	-8.615850e-47
Msa0049450	Msa0751720	0.815289	9.977437e-52	-8.615850e-47
Msa0049450	Msa0764770	0.815250	1.017699e-51	-8.615850e-47
Msa0049450	Msa0790330	0.808594	2.868317e-50	-8.615850e-47
Msa0049450	Msa0803140	0.833912	4.059615e-56	-8.615850e-47
Msa0049450	Msa0816080	0.803115	4.067119e-49	-8.615850e-47
Msa0049450	Msa0831820	0.815282	1.001346e-51	-8.615850e-47
Msa0049450	Msa0837680	0.803994	2.672063e-49	-8.615850e-47
Msa0049450	Msa0841500	0.835369	1.746791e-56	-8.615850e-47
Msa0049450	Msa0846900	0.818713	1.698150e-52	-8.615850e-47
Msa0049450	Msa0856610	0.809357	1.969439e-50	-8.615850e-47
Msa0049450	Msa0861440	0.816258	6.068054e-52	-8.615850e-47
Msa0049450	Msa0900090	0.800891	1.165174e-48	-8.615850e-47
Msa0049450	Msa0926760	0.813687	2.256792e-51	-8.615850e-47
Msa0049450	Msa0929900	0.809153	2.178049e-50	-8.615850e-47
Msa0049450	Msa0965470	0.817204	3.722988e-52	-8.615850e-47
Msa0049450	Msa1008850	0.813199	2.888078e-51	-8.615850e-47
Msa0049450	Msa1021560	0.801295	9.633575e-49	-8.615850e-47
Msa0049450	Msa1060300	0.805402	1.358096e-49	-8.615850e-47
Msa0049450	Msa1071410	0.818375	2.025471e-52	-8.615850e-47
Msa0049450	Msa1085680	0.813296	2.749760e-51	-8.615850e-47
Msa0049450	Msa1105540	0.808449	3.080402e-50	-8.615850e-47
Msa0049450	Msa1106220	0.838385	2.966887e-57	-8.615850e-47
Msa0049450	Msa1144990	0.823808	1.134797e-53	-8.615850e-47
Msa0049450	Msa1163180	0.806533	7.856177e-50	-8.615850e-47
Msa0049450	Msa1169170	0.802465	5.537635e-49	-8.615850e-47
Msa0049450	Msa1206040	0.809915	1.494142e-50	-8.615850e-47
Msa0049450	Msa1215980	0.819905	9.083079e-53	-8.615850e-47
Msa0049450	Msa1240940	0.814592	1.424274e-51	-8.615850e-47
Msa0049450	Msa1244690	0.816727	4.765069e-52	-8.615850e-47
Msa0049450	Msa1254420	0.810548	1.091376e-50	-8.615850e-47
Msa0049450	Msa1256120	0.825503	4.524204e-54	-8.615850e-47
Msa0049450	Msa1278030	0.800368	1.489176e-48	-8.615850e-47
Msa0049450	Msa1282300	0.819217	1.303921e-52	-8.615850e-47
Msa0049450	Msa1294790	0.825452	4.651925e-54	-8.615850e-47
Msa0049450	Msa1296330	0.806021	1.007154e-49	-8.615850e-47
Msa0049450	Msa1297070	0.805288	1.434764e-49	-8.615850e-47
Msa0049450	Msa1301820	0.813198	2.889920e-51	-8.615850e-47
Msa0049450	Msa1328870	0.805876	1.080294e-49	-8.615850e-47
Msa0049450	Msa1331650	0.807824	4.184661e-50	-8.615850e-47
Msa0049450	Msa1371800	0.801972	6.996241e-49	-8.615850e-47
Msa0049450	Msa1372030	0.822060	2.898174e-53	-8.615850e-47
Msa0049450	Msa1376310	0.800718	1.263983e-48	-8.615850e-47
Msa0049450	Msa1381800	0.817630	2.984752e-52	-8.615850e-47
Msa0049450	Msa1389820	0.800061	1.719305e-48	-8.615850e-47
Msa0049450	Msa1390210	0.828156	1.051220e-54	-8.615850e-47
Msa0049450	Msa1424590	0.815675	8.186301e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0049450	MtrunA17_Chr4g0053001	97.281	331	8	1	1	330	1	331	0.0	668
Msa0049450	MtrunA17_Chr6g0483441	49.693	326	124	8	12	329	1	294	7.93e-95	283
Msa0049450	MtrunA17_Chr8g0392551	50.943	318	134	5	12	329	1	296	6.91e-91	273
Msa0049450	MtrunA17_Chr2g0331671	42.320	319	168	11	14	329	4	309	3.94e-70	221
Msa0049450	MtrunA17_Chr4g0038691	43.465	329	163	10	10	329	4	318	2.06e-66	211
Msa0049450	MtrunA17_Chr6g0486001	40.248	323	173	8	12	330	1	307	1.22e-58	191
Msa0049450	MtrunA17_Chr3g0091821	54.321	162	58	3	171	326	39	190	7.79e-49	162
Msa0049450	MtrunA17_Chr3g0090061	26.471	306	187	11	39	311	29	329	2.49e-19	87.4
Msa0049450	MtrunA17_Chr8g0379281	45.055	91	41	1	146	236	105	186	1.63e-17	79.7
Msa0049450	MtrunA17_Chr8g0379271	33.333	96	60	2	236	329	1	94	4.76e-11	58.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0049450	AT1G45688.1	51.594	345	131	8	12	327	1	338	1.35e-97	292
Msa0049450	AT5G42860.1	48.665	337	131	6	12	327	1	316	3.35e-93	280
Msa0049450	AT1G45688.2	49.801	251	95	7	12	244	1	238	5.62e-73	226
Msa0049450	AT4G35170.1	36.364	308	174	7	25	327	7	297	1.36e-51	173
Msa0049450	AT2G41990.1	38.801	317	170	7	12	326	1	295	8.44e-51	171
Msa0049450	AT3G24600.1	32.500	320	188	7	12	325	2	299	2.29e-36	133
Msa0049450	AT3G24605.1	29.934	304	188	7	10	311	1	281	1.29e-35	131
Msa0049450	AT3G08490.1	23.585	212	155	4	121	326	57	267	2.47e-17	80.9

Find 97 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGAAGTGGGCTTGAGTTAA+AGG	0.197154	1_2:+2816542	None:intergenic
AGAGTTATTGTTAGTGTAAT+TGG	0.210630	1_2:+2816778	None:intergenic
GATTATGGATCCGAAGAAAA+TGG	0.228318	1_2:-2815182	Msa0049450:CDS
ACCATTGACATTGAATATTA+TGG	0.231681	1_2:-2815275	Msa0049450:CDS
GCCAATTACCTTTCCTGTTA+TGG	0.240601	1_2:+2816409	None:intergenic
AGGTCAAAAGCTTATGTATT+AGG	0.241379	1_2:-2815250	Msa0049450:CDS
TAATTTATGTAGAAATTTAA+AGG	0.265793	1_2:-2815066	Msa0049450:three_prime_UTR
GTAGAAATTTAAAGGGGTTT+GGG	0.267563	1_2:-2815058	Msa0049450:three_prime_UTR
GTTCTATTTCAACTTCAAAT+AGG	0.289456	1_2:-2814889	Msa0049450:three_prime_UTR
TGTAGAAATTTAAAGGGGTT+TGG	0.295823	1_2:-2815059	Msa0049450:three_prime_UTR
CCAATTACCTTTCCTGTTAT+GGG	0.301565	1_2:+2816410	None:intergenic
AATTGAGTGTGCATTGATTA+TGG	0.311781	1_2:-2815197	Msa0049450:CDS
AATTTATGTAGAAATTTAAA+GGG	0.332577	1_2:-2815065	Msa0049450:three_prime_UTR
GGAAGTCATATTCCACTATA+TGG	0.335033	1_2:-2815346	Msa0049450:CDS
CCCATAACAGGAAAGGTAAT+TGG	0.338006	1_2:-2816410	Msa0049450:CDS
GGTCAAAAGCTTATGTATTA+GGG	0.353077	1_2:-2815249	Msa0049450:CDS
GCAGTCAAGCTTCCCATAAC+AGG	0.360744	1_2:-2816422	Msa0049450:CDS
ATCTGCATAGCGTAAGTGTT+GGG	0.373743	1_2:+2816842	None:intergenic
TATTGTTACATGAAATTTGA+AGG	0.377989	1_2:-2814948	Msa0049450:three_prime_UTR
TGGTAATAATTGAGATCTAA+TGG	0.385611	1_2:+2815531	None:intergenic
CATTGTTGATGTGAAGTTTG+AGG	0.388470	1_2:+2816734	None:intergenic
TACCAACTTACACTAGCAAC+TGG	0.405417	1_2:-2815513	Msa0049450:CDS
TCTCATTCCAACTCGTCGTT+GGG	0.408279	1_2:-2816495	Msa0049450:CDS
AAGAAGTCCTTCTTCTTCAA+TGG	0.413272	1_2:+2816362	None:intergenic
GTCAATGGTACCGGTTCATC+CGG	0.432543	1_2:+2815289	None:intergenic
AGCTTATGTATTAGGGGCAT+TGG	0.433647	1_2:-2815242	Msa0049450:CDS
CACTTGTTGGCAAGTCGAAT+AGG	0.433990	1_2:+2815154	None:intergenic
GGAAAGGTAATTGGCGTCCT+TGG	0.434224	1_2:-2816401	Msa0049450:CDS
TAACTCATACGTACACTTGT+TGG	0.434875	1_2:+2815141	None:intergenic
CAATGGTTCACCGGATGAAC+CGG	0.436557	1_2:-2815299	Msa0049450:CDS
TTTCTTGATTGATAAAACTT+AGG	0.441416	1_2:+2815400	None:intergenic
TTCTCATTCCAACTCGTCGT+TGG	0.441548	1_2:-2816496	Msa0049450:CDS
GCAGGAAAATAGCATCTCCT+AGG	0.445069	1_2:+2816309	None:intergenic
CAAGCGGGTGCGGATTTGTC+AGG	0.445363	1_2:-2815645	Msa0049450:CDS
TTTAATGCCATTGAAGAAGA+AGG	0.460904	1_2:-2816369	Msa0049450:CDS
TTGTCGGTGAGGATTGTGTT+AGG	0.463501	1_2:+2816649	None:intergenic
TCATTTATTACTTCCACGTA+TGG	0.474436	1_2:+2815104	None:intergenic
GCTTACCTCGGAGTCTGTCT+TGG	0.474995	1_2:+2816674	None:intergenic
AGCCCACTTCAAAGCCCGTT+GGG	0.480036	1_2:-2816531	Msa0049450:CDS
AAGAAACAAACAACAAAAGC+AGG	0.480722	1_2:+2816291	None:intergenic
ATTATGGATCCGAAGAAAAT+GGG	0.484777	1_2:-2815181	Msa0049450:CDS
AATGAGGAGGAGATCCCAAC+GGG	0.512593	1_2:+2816517	None:intergenic
TTCCAGTTGCTAGTGTAAGT+TGG	0.513143	1_2:+2815511	None:intergenic
ACCATAATATTCAATGTCAA+TGG	0.513438	1_2:+2815274	None:intergenic
GAGGAAGATTCACGTGAATG+TGG	0.516881	1_2:+2816471	None:intergenic
ATTTATCATTCAAGCGGGTG+CGG	0.517433	1_2:-2815655	Msa0049450:CDS
CGTAAGTGTTGGGGCATGCA+AGG	0.518852	1_2:+2816852	None:intergenic
GTTGATGTGAAGTTTGAGGT+TGG	0.520087	1_2:+2816738	None:intergenic
AGGTAATTGGCGTCCTTGGA+AGG	0.521480	1_2:-2816397	Msa0049450:CDS
TAGAAATTTAAAGGGGTTTG+GGG	0.528479	1_2:-2815057	Msa0049450:three_prime_UTR
TCTATTAAAGTGATGGTGAA+AGG	0.536712	1_2:-2815367	Msa0049450:CDS
GCAAGATTGAACACTATCAA+TGG	0.537446	1_2:-2815316	Msa0049450:CDS
ATATTCAATGTCAATGGTAC+CGG	0.541625	1_2:+2815280	None:intergenic
TCAAAGATCTATTAAAGTGA+TGG	0.545202	1_2:-2815374	Msa0049450:CDS
GAACACTATCAATGGTTCAC+CGG	0.546434	1_2:-2815308	Msa0049450:CDS
ATGCAGATCGTGGATTCCCT+AGG	0.552676	1_2:-2816326	Msa0049450:CDS
GTCAGGAGTTGCCACTAGCA+TGG	0.553632	1_2:-2815628	Msa0049450:CDS
ATCCCAACGGGCTTTGAAGT+GGG	0.555397	1_2:+2816529	None:intergenic
GATCCCAACGGGCTTTGAAG+TGG	0.558461	1_2:+2816528	None:intergenic
AGCCCATCACGTGATCTTGT+CGG	0.561235	1_2:+2816633	None:intergenic
GTCATATTCCACTATATGGA+GGG	0.565203	1_2:-2815342	Msa0049450:CDS
TTGTGTTAGGCTGCTTACCT+CGG	0.565391	1_2:+2816662	None:intergenic
AAGCCCACTTCAAAGCCCGT+TGG	0.565440	1_2:-2816532	Msa0049450:CDS
GATAGATTTATCATTCAAGC+GGG	0.565737	1_2:-2815660	Msa0049450:CDS
GACGAGTTGGAATGAGAATG+AGG	0.572775	1_2:+2816501	None:intergenic
AATCTGCATAGCGTAAGTGT+TGG	0.579164	1_2:+2816841	None:intergenic
CAGGAAAATAGCATCTCCTA+GGG	0.584033	1_2:+2816310	None:intergenic
CGTTGGAAGAGTCACGTGAT+GGG	0.586920	1_2:+2816586	None:intergenic
TCGTTGGAAGAGTCACGTGA+TGG	0.590631	1_2:+2816585	None:intergenic
TGATAGATTTATCATTCAAG+CGG	0.599846	1_2:-2815661	Msa0049450:CDS
CACCGACAAGATCACGTGAT+GGG	0.601025	1_2:-2816635	Msa0049450:CDS
ATTTATGTAGAAATTTAAAG+GGG	0.601772	1_2:-2815064	Msa0049450:three_prime_UTR
TCATATTCCACTATATGGAG+GGG	0.602380	1_2:-2815341	Msa0049450:CDS
CAAGCTTCCCATAACAGGAA+AGG	0.602700	1_2:-2816417	Msa0049450:CDS
CATATTCCACTATATGGAGG+GGG	0.611721	1_2:-2815340	Msa0049450:CDS
GCATTAAACTGATCCTTCCA+AGG	0.614580	1_2:+2816384	None:intergenic
TCTGCATAGCGTAAGTGTTG+GGG	0.616021	1_2:+2816843	None:intergenic
AGTCATATTCCACTATATGG+AGG	0.618199	1_2:-2815343	Msa0049450:CDS
ATTCATGGACACCATGCTAG+TGG	0.619012	1_2:+2815617	None:intergenic
ATGTGGGCCCAACGACGAGT+TGG	0.620193	1_2:+2816488	None:intergenic
TGACATTGAATATTATGGTG+AGG	0.620220	1_2:-2815270	Msa0049450:CDS
CTAATGGAGATGATGCAACA+TGG	0.632609	1_2:+2815547	None:intergenic
ATCACGTGATCTTGTCGGTG+AGG	0.634015	1_2:+2816638	None:intergenic
AGGAAGATTCACGTGAATGT+GGG	0.636052	1_2:+2816472	None:intergenic
GTCAAAAGCTTATGTATTAG+GGG	0.642134	1_2:-2815248	Msa0049450:CDS
GATGATGATGATGCAGATCG+TGG	0.642710	1_2:-2816336	Msa0049450:CDS
AGCTTGACTGCTCTTACGTG+AGG	0.648575	1_2:+2816434	None:intergenic
TCACCGACAAGATCACGTGA+TGG	0.649203	1_2:-2816636	Msa0049450:CDS
TATCATGTTTGATGAGTGAG+TGG	0.654886	1_2:+2816809	None:intergenic
GAATGAGGAGGAGATCCCAA+CGG	0.666085	1_2:+2816516	None:intergenic
GGGCATGCAAGGACAGCTAG+TGG	0.666634	1_2:+2816863	None:intergenic
TCACGTGACTCTTCCAACGA+CGG	0.683036	1_2:-2816582	Msa0049450:CDS
AGACTCGATCATACCATACG+TGG	0.703910	1_2:-2815117	Msa0049450:three_prime_UTR
ACGTGAGGCAGAGTATCTCG+TGG	0.711321	1_2:+2816449	None:intergenic
TGAGGCAGAGTATCTCGTGG+AGG	0.725109	1_2:+2816452	None:intergenic
GTTAGCCAAGACAGACTCCG+AGG	0.733209	1_2:-2816679	Msa0049450:CDS
GAGTTGGAATGAGAATGAGG+AGG	0.746577	1_2:+2816504	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATCATGTATTATATTATA+TGG	-	chr1_2:2816326-2816345	Msa0049450:CDS	10.0%
!!	TAATTTATGTAGAAATTTAA+AGG	-	chr1_2:2816703-2816722	Msa0049450:CDS	10.0%
!!	AATTTATGTAGAAATTTAAA+GGG	-	chr1_2:2816704-2816723	Msa0049450:CDS	10.0%
!!	TAATCATGTATTATATTATA+TGG	-	chr1_2:2816326-2816345	Msa0049450:CDS	10.0%
!!	TAATTTATGTAGAAATTTAA+AGG	-	chr1_2:2816703-2816722	Msa0049450:CDS	10.0%
!!	AATTTATGTAGAAATTTAAA+GGG	-	chr1_2:2816704-2816723	Msa0049450:CDS	10.0%
!!	ATTGAAAAATCAACATTATA+TGG	+	chr1_2:2816009-2816028	None:intergenic	15.0%
!!	ATTTATGTAGAAATTTAAAG+GGG	-	chr1_2:2816705-2816724	Msa0049450:CDS	15.0%
!!!	AAAATCTAAATTACACTTTT+AGG	+	chr1_2:2816853-2816872	None:intergenic	15.0%
!!	ATTGAAAAATCAACATTATA+TGG	+	chr1_2:2816009-2816028	None:intergenic	15.0%
!!	ATTTATGTAGAAATTTAAAG+GGG	-	chr1_2:2816705-2816724	Msa0049450:CDS	15.0%
!!!	AAAATCTAAATTACACTTTT+AGG	+	chr1_2:2816853-2816872	None:intergenic	15.0%
!!	TACATTGAAATTAGAAATGA+TGG	+	chr1_2:2815585-2815604	None:intergenic	20.0%
!!	ATCATTTCTAATTTCAATGT+AGG	-	chr1_2:2815584-2815603	Msa0049450:CDS	20.0%
!!!	CTTTTATTTGAATGCATATT+TGG	+	chr1_2:2815848-2815867	None:intergenic	20.0%
!!!	TTTTAATTATAGTCACAATG+TGG	+	chr1_2:2815925-2815944	None:intergenic	20.0%
!!	TTTCTTGATTGATAAAACTT+AGG	+	chr1_2:2816372-2816391	None:intergenic	20.0%
!!	TATTGTTACATGAAATTTGA+AGG	-	chr1_2:2816821-2816840	Msa0049450:five_prime_UTR	20.0%
!!!	AAGTGTAATTTAGATTTTGT+CGG	-	chr1_2:2816855-2816874	Msa0049450:five_prime_UTR	20.0%
!!	TACATTGAAATTAGAAATGA+TGG	+	chr1_2:2815585-2815604	None:intergenic	20.0%
!!	ATCATTTCTAATTTCAATGT+AGG	-	chr1_2:2815584-2815603	Msa0049450:CDS	20.0%
!!!	CTTTTATTTGAATGCATATT+TGG	+	chr1_2:2815848-2815867	None:intergenic	20.0%
!!!	TTTTAATTATAGTCACAATG+TGG	+	chr1_2:2815925-2815944	None:intergenic	20.0%
!!	TTTCTTGATTGATAAAACTT+AGG	+	chr1_2:2816372-2816391	None:intergenic	20.0%
!!	TATTGTTACATGAAATTTGA+AGG	-	chr1_2:2816821-2816840	Msa0049450:five_prime_UTR	20.0%
!!!	AAGTGTAATTTAGATTTTGT+CGG	-	chr1_2:2816855-2816874	Msa0049450:five_prime_UTR	20.0%
!	AGAGTTATTGTTAGTGTAAT+TGG	+	chr1_2:2814994-2815013	None:intergenic	25.0%
!	TTTAGATTCACAGAATGATA+TGG	-	chr1_2:2815619-2815638	Msa0049450:CDS	25.0%
!	CTTCTGATTACATTGAATTA+TGG	-	chr1_2:2815750-2815769	Msa0049450:intron	25.0%
!	AGATAAATCTGTATTTGAAG+TGG	-	chr1_2:2815944-2815963	Msa0049450:intron	25.0%
!!	GATAAATCTGTATTTGAAGT+GGG	-	chr1_2:2815945-2815964	Msa0049450:intron	25.0%
!!!	TTGTTTTGTGTATGTATGTT+TGG	-	chr1_2:2816071-2816090	Msa0049450:intron	25.0%
!	TGATAGATTTATCATTCAAG+CGG	-	chr1_2:2816108-2816127	Msa0049450:intron	25.0%
!	TGGTAATAATTGAGATCTAA+TGG	+	chr1_2:2816241-2816260	None:intergenic	25.0%
!	TCAAAGATCTATTAAAGTGA+TGG	-	chr1_2:2816395-2816414	Msa0049450:CDS	25.0%
!	ACCATTGACATTGAATATTA+TGG	-	chr1_2:2816494-2816513	Msa0049450:CDS	25.0%
!	ACCATAATATTCAATGTCAA+TGG	+	chr1_2:2816498-2816517	None:intergenic	25.0%
!!	TCAATTTTCTTGTTGAATCT+TGG	+	chr1_2:2816558-2816577	None:intergenic	25.0%
!	GTTCTATTTCAACTTCAAAT+AGG	-	chr1_2:2816880-2816899	Msa0049450:five_prime_UTR	25.0%
!	AGAGTTATTGTTAGTGTAAT+TGG	+	chr1_2:2814994-2815013	None:intergenic	25.0%
!	TTTAGATTCACAGAATGATA+TGG	-	chr1_2:2815619-2815638	Msa0049450:CDS	25.0%
!	CTTCTGATTACATTGAATTA+TGG	-	chr1_2:2815750-2815769	Msa0049450:intron	25.0%
!	AGATAAATCTGTATTTGAAG+TGG	-	chr1_2:2815944-2815963	Msa0049450:intron	25.0%
!!	GATAAATCTGTATTTGAAGT+GGG	-	chr1_2:2815945-2815964	Msa0049450:intron	25.0%
!!!	TTGTTTTGTGTATGTATGTT+TGG	-	chr1_2:2816071-2816090	Msa0049450:intron	25.0%
!	TGATAGATTTATCATTCAAG+CGG	-	chr1_2:2816108-2816127	Msa0049450:intron	25.0%
!	TGGTAATAATTGAGATCTAA+TGG	+	chr1_2:2816241-2816260	None:intergenic	25.0%
!	TCAAAGATCTATTAAAGTGA+TGG	-	chr1_2:2816395-2816414	Msa0049450:CDS	25.0%
!	ACCATTGACATTGAATATTA+TGG	-	chr1_2:2816494-2816513	Msa0049450:CDS	25.0%
!	ACCATAATATTCAATGTCAA+TGG	+	chr1_2:2816498-2816517	None:intergenic	25.0%
!!	TCAATTTTCTTGTTGAATCT+TGG	+	chr1_2:2816558-2816577	None:intergenic	25.0%
!	GTTCTATTTCAACTTCAAAT+AGG	-	chr1_2:2816880-2816899	Msa0049450:five_prime_UTR	25.0%
!!!	ATGTTGTTGTTGTTGTTTTC+TGG	+	chr1_2:2815064-2815083	None:intergenic	30.0%
	TTTAATGCCATTGAAGAAGA+AGG	-	chr1_2:2815400-2815419	Msa0049450:CDS	30.0%
	AAGAAACAAACAACAAAAGC+AGG	+	chr1_2:2815481-2815500	None:intergenic	30.0%
!	TGTTTTCTCTCTCATTCTTT+GGG	-	chr1_2:2815513-2815532	Msa0049450:CDS	30.0%
	AAGTTGTCACAATTGTTCTT+TGG	-	chr1_2:2815865-2815884	Msa0049450:intron	30.0%
	CAACATTATATGGAAAACCA+CGG	+	chr1_2:2815999-2816018	None:intergenic	30.0%
	GATAGATTTATCATTCAAGC+GGG	-	chr1_2:2816109-2816128	Msa0049450:intron	30.0%
!!!	TCTAAATGTCATTTTCACAG+TGG	+	chr1_2:2816179-2816198	None:intergenic	30.0%
!!!	AGAAACACTGCAACATTTTT+TGG	-	chr1_2:2816196-2816215	Msa0049450:intron	30.0%
!!!	GAAACACTGCAACATTTTTT+GGG	-	chr1_2:2816197-2816216	Msa0049450:intron	30.0%
!!!	AAACACTGCAACATTTTTTG+GGG	-	chr1_2:2816198-2816217	Msa0049450:intron	30.0%
!	TCTATTAAAGTGATGGTGAA+AGG	-	chr1_2:2816402-2816421	Msa0049450:CDS	30.0%
	ATATTCAATGTCAATGGTAC+CGG	+	chr1_2:2816492-2816511	None:intergenic	30.0%
	TGACATTGAATATTATGGTG+AGG	-	chr1_2:2816499-2816518	Msa0049450:CDS	30.0%
	AGGTCAAAAGCTTATGTATT+AGG	-	chr1_2:2816519-2816538	Msa0049450:CDS	30.0%
	GGTCAAAAGCTTATGTATTA+GGG	-	chr1_2:2816520-2816539	Msa0049450:CDS	30.0%
	GTCAAAAGCTTATGTATTAG+GGG	-	chr1_2:2816521-2816540	Msa0049450:CDS	30.0%
!!	AATTGAGTGTGCATTGATTA+TGG	-	chr1_2:2816572-2816591	Msa0049450:CDS	30.0%
	ATTATGGATCCGAAGAAAAT+GGG	-	chr1_2:2816588-2816607	Msa0049450:CDS	30.0%
	TCATTTATTACTTCCACGTA+TGG	+	chr1_2:2816668-2816687	None:intergenic	30.0%
	TGTAGAAATTTAAAGGGGTT+TGG	-	chr1_2:2816710-2816729	Msa0049450:CDS	30.0%
	GTAGAAATTTAAAGGGGTTT+GGG	-	chr1_2:2816711-2816730	Msa0049450:CDS	30.0%
	TAGAAATTTAAAGGGGTTTG+GGG	-	chr1_2:2816712-2816731	Msa0049450:CDS	30.0%
!	ATTAGCACATGAGTTTTCTT+TGG	-	chr1_2:2816760-2816779	Msa0049450:five_prime_UTR	30.0%
!	TGTAATTTAGATTTTGTCGG+TGG	-	chr1_2:2816858-2816877	Msa0049450:five_prime_UTR	30.0%
!!!	ATGTTGTTGTTGTTGTTTTC+TGG	+	chr1_2:2815064-2815083	None:intergenic	30.0%
	TTTAATGCCATTGAAGAAGA+AGG	-	chr1_2:2815400-2815419	Msa0049450:CDS	30.0%
	AAGAAACAAACAACAAAAGC+AGG	+	chr1_2:2815481-2815500	None:intergenic	30.0%
!	TGTTTTCTCTCTCATTCTTT+GGG	-	chr1_2:2815513-2815532	Msa0049450:CDS	30.0%
	AAGTTGTCACAATTGTTCTT+TGG	-	chr1_2:2815865-2815884	Msa0049450:intron	30.0%
	CAACATTATATGGAAAACCA+CGG	+	chr1_2:2815999-2816018	None:intergenic	30.0%
	GATAGATTTATCATTCAAGC+GGG	-	chr1_2:2816109-2816128	Msa0049450:intron	30.0%
!!!	TCTAAATGTCATTTTCACAG+TGG	+	chr1_2:2816179-2816198	None:intergenic	30.0%
!!!	AGAAACACTGCAACATTTTT+TGG	-	chr1_2:2816196-2816215	Msa0049450:intron	30.0%
!!!	GAAACACTGCAACATTTTTT+GGG	-	chr1_2:2816197-2816216	Msa0049450:intron	30.0%
!!!	AAACACTGCAACATTTTTTG+GGG	-	chr1_2:2816198-2816217	Msa0049450:intron	30.0%
!	TCTATTAAAGTGATGGTGAA+AGG	-	chr1_2:2816402-2816421	Msa0049450:CDS	30.0%
	ATATTCAATGTCAATGGTAC+CGG	+	chr1_2:2816492-2816511	None:intergenic	30.0%
	TGACATTGAATATTATGGTG+AGG	-	chr1_2:2816499-2816518	Msa0049450:CDS	30.0%
	AGGTCAAAAGCTTATGTATT+AGG	-	chr1_2:2816519-2816538	Msa0049450:CDS	30.0%
	GGTCAAAAGCTTATGTATTA+GGG	-	chr1_2:2816520-2816539	Msa0049450:CDS	30.0%
	GTCAAAAGCTTATGTATTAG+GGG	-	chr1_2:2816521-2816540	Msa0049450:CDS	30.0%
!!	AATTGAGTGTGCATTGATTA+TGG	-	chr1_2:2816572-2816591	Msa0049450:CDS	30.0%
	ATTATGGATCCGAAGAAAAT+GGG	-	chr1_2:2816588-2816607	Msa0049450:CDS	30.0%
	TCATTTATTACTTCCACGTA+TGG	+	chr1_2:2816668-2816687	None:intergenic	30.0%
	TGTAGAAATTTAAAGGGGTT+TGG	-	chr1_2:2816710-2816729	Msa0049450:CDS	30.0%
	GTAGAAATTTAAAGGGGTTT+GGG	-	chr1_2:2816711-2816730	Msa0049450:CDS	30.0%
	TAGAAATTTAAAGGGGTTTG+GGG	-	chr1_2:2816712-2816731	Msa0049450:CDS	30.0%
!	ATTAGCACATGAGTTTTCTT+TGG	-	chr1_2:2816760-2816779	Msa0049450:five_prime_UTR	30.0%
!	TGTAATTTAGATTTTGTCGG+TGG	-	chr1_2:2816858-2816877	Msa0049450:five_prime_UTR	30.0%
	TATCATGTTTGATGAGTGAG+TGG	+	chr1_2:2814963-2814982	None:intergenic	35.0%
	CATTGTTGATGTGAAGTTTG+AGG	+	chr1_2:2815038-2815057	None:intergenic	35.0%
	CCAATTACCTTTCCTGTTAT+GGG	+	chr1_2:2815362-2815381	None:intergenic	35.0%
	AAGAAGTCCTTCTTCTTCAA+TGG	+	chr1_2:2815410-2815429	None:intergenic	35.0%
!	CTGTTTTCTCTCTCATTCTT+TGG	-	chr1_2:2815512-2815531	Msa0049450:CDS	35.0%
!	GAAAAATGGCAGGTTTTTGA+GGG	+	chr1_2:2815549-2815568	None:intergenic	35.0%
!	AGAAAAATGGCAGGTTTTTG+AGG	+	chr1_2:2815550-2815569	None:intergenic	35.0%
!!!	AAAACCTGCCATTTTTCTCA+AGG	-	chr1_2:2815552-2815571	Msa0049450:CDS	35.0%
!!	GAGAAGTACCTTGAGAAAAA+TGG	+	chr1_2:2815563-2815582	None:intergenic	35.0%
!!	GTAATCAGAAGTGTCGATAT+CGG	+	chr1_2:2815741-2815760	None:intergenic	35.0%
	GTATTTCCCATTTAATACCG+TGG	-	chr1_2:2815979-2815998	Msa0049450:intron	35.0%
	GGAAAACCACGGTATTAAAT+GGG	+	chr1_2:2815988-2816007	None:intergenic	35.0%
	TGGAAAACCACGGTATTAAA+TGG	+	chr1_2:2815989-2816008	None:intergenic	35.0%
!	CATTTTCACAGTGGAATTCA+TGG	+	chr1_2:2816170-2816189	None:intergenic	35.0%
	GGAAGTCATATTCCACTATA+TGG	-	chr1_2:2816423-2816442	Msa0049450:CDS	35.0%
	AGTCATATTCCACTATATGG+AGG	-	chr1_2:2816426-2816445	Msa0049450:CDS	35.0%
	GTCATATTCCACTATATGGA+GGG	-	chr1_2:2816427-2816446	Msa0049450:CDS	35.0%
	TCATATTCCACTATATGGAG+GGG	-	chr1_2:2816428-2816447	Msa0049450:CDS	35.0%
	GCAAGATTGAACACTATCAA+TGG	-	chr1_2:2816453-2816472	Msa0049450:CDS	35.0%
	GATTATGGATCCGAAGAAAA+TGG	-	chr1_2:2816587-2816606	Msa0049450:CDS	35.0%
!	ATAGGCTTACCCATTTTCTT+CGG	+	chr1_2:2816600-2816619	None:intergenic	35.0%
	TAACTCATACGTACACTTGT+TGG	+	chr1_2:2816631-2816650	None:intergenic	35.0%
	TATCATGTTTGATGAGTGAG+TGG	+	chr1_2:2814963-2814982	None:intergenic	35.0%
	CATTGTTGATGTGAAGTTTG+AGG	+	chr1_2:2815038-2815057	None:intergenic	35.0%
	CCAATTACCTTTCCTGTTAT+GGG	+	chr1_2:2815362-2815381	None:intergenic	35.0%
	AAGAAGTCCTTCTTCTTCAA+TGG	+	chr1_2:2815410-2815429	None:intergenic	35.0%
!	CTGTTTTCTCTCTCATTCTT+TGG	-	chr1_2:2815512-2815531	Msa0049450:CDS	35.0%
!	GAAAAATGGCAGGTTTTTGA+GGG	+	chr1_2:2815549-2815568	None:intergenic	35.0%
!	AGAAAAATGGCAGGTTTTTG+AGG	+	chr1_2:2815550-2815569	None:intergenic	35.0%
!!!	AAAACCTGCCATTTTTCTCA+AGG	-	chr1_2:2815552-2815571	Msa0049450:CDS	35.0%
!!	GAGAAGTACCTTGAGAAAAA+TGG	+	chr1_2:2815563-2815582	None:intergenic	35.0%
!!	GTAATCAGAAGTGTCGATAT+CGG	+	chr1_2:2815741-2815760	None:intergenic	35.0%
	GTATTTCCCATTTAATACCG+TGG	-	chr1_2:2815979-2815998	Msa0049450:intron	35.0%
	GGAAAACCACGGTATTAAAT+GGG	+	chr1_2:2815988-2816007	None:intergenic	35.0%
	TGGAAAACCACGGTATTAAA+TGG	+	chr1_2:2815989-2816008	None:intergenic	35.0%
!	CATTTTCACAGTGGAATTCA+TGG	+	chr1_2:2816170-2816189	None:intergenic	35.0%
	GGAAGTCATATTCCACTATA+TGG	-	chr1_2:2816423-2816442	Msa0049450:CDS	35.0%
	AGTCATATTCCACTATATGG+AGG	-	chr1_2:2816426-2816445	Msa0049450:CDS	35.0%
	GTCATATTCCACTATATGGA+GGG	-	chr1_2:2816427-2816446	Msa0049450:CDS	35.0%
	TCATATTCCACTATATGGAG+GGG	-	chr1_2:2816428-2816447	Msa0049450:CDS	35.0%
	GCAAGATTGAACACTATCAA+TGG	-	chr1_2:2816453-2816472	Msa0049450:CDS	35.0%
	GATTATGGATCCGAAGAAAA+TGG	-	chr1_2:2816587-2816606	Msa0049450:CDS	35.0%
!	ATAGGCTTACCCATTTTCTT+CGG	+	chr1_2:2816600-2816619	None:intergenic	35.0%
	TAACTCATACGTACACTTGT+TGG	+	chr1_2:2816631-2816650	None:intergenic	35.0%
	ATCTGCATAGCGTAAGTGTT+GGG	+	chr1_2:2814930-2814949	None:intergenic	40.0%
	AATCTGCATAGCGTAAGTGT+TGG	+	chr1_2:2814931-2814950	None:intergenic	40.0%
!	GTTGATGTGAAGTTTGAGGT+TGG	+	chr1_2:2815034-2815053	None:intergenic	40.0%
!	TTGAAGTGGGCTTGAGTTAA+AGG	+	chr1_2:2815230-2815249	None:intergenic	40.0%
	AGGAAGATTCACGTGAATGT+GGG	+	chr1_2:2815300-2815319	None:intergenic	40.0%
	CCCATAACAGGAAAGGTAAT+TGG	-	chr1_2:2815359-2815378	Msa0049450:CDS	40.0%
	GCCAATTACCTTTCCTGTTA+TGG	+	chr1_2:2815363-2815382	None:intergenic	40.0%
	GCATTAAACTGATCCTTCCA+AGG	+	chr1_2:2815388-2815407	None:intergenic	40.0%
	CAGGAAAATAGCATCTCCTA+GGG	+	chr1_2:2815462-2815481	None:intergenic	40.0%
	AGTACCTTGAGAAAAATGGC+AGG	+	chr1_2:2815559-2815578	None:intergenic	40.0%
	TCGATATCGGACATAGACAT+CGG	+	chr1_2:2815728-2815747	None:intergenic	40.0%
!!	CAGTAATGAAGCACTGACAT+CGG	+	chr1_2:2815820-2815839	None:intergenic	40.0%
	ATTTATCATTCAAGCGGGTG+CGG	-	chr1_2:2816114-2816133	Msa0049450:intron	40.0%
	CTAATGGAGATGATGCAACA+TGG	+	chr1_2:2816225-2816244	None:intergenic	40.0%
	TACCAACTTACACTAGCAAC+TGG	-	chr1_2:2816256-2816275	Msa0049450:CDS	40.0%
	TTCCAGTTGCTAGTGTAAGT+TGG	+	chr1_2:2816261-2816280	None:intergenic	40.0%
	CATATTCCACTATATGGAGG+GGG	-	chr1_2:2816429-2816448	Msa0049450:CDS	40.0%
	GAACACTATCAATGGTTCAC+CGG	-	chr1_2:2816461-2816480	Msa0049450:CDS	40.0%
!	AGCTTATGTATTAGGGGCAT+TGG	-	chr1_2:2816527-2816546	Msa0049450:CDS	40.0%
	ATCTGCATAGCGTAAGTGTT+GGG	+	chr1_2:2814930-2814949	None:intergenic	40.0%
	AATCTGCATAGCGTAAGTGT+TGG	+	chr1_2:2814931-2814950	None:intergenic	40.0%
!	GTTGATGTGAAGTTTGAGGT+TGG	+	chr1_2:2815034-2815053	None:intergenic	40.0%
!	TTGAAGTGGGCTTGAGTTAA+AGG	+	chr1_2:2815230-2815249	None:intergenic	40.0%
	AGGAAGATTCACGTGAATGT+GGG	+	chr1_2:2815300-2815319	None:intergenic	40.0%
	CCCATAACAGGAAAGGTAAT+TGG	-	chr1_2:2815359-2815378	Msa0049450:CDS	40.0%
	GCCAATTACCTTTCCTGTTA+TGG	+	chr1_2:2815363-2815382	None:intergenic	40.0%
	GCATTAAACTGATCCTTCCA+AGG	+	chr1_2:2815388-2815407	None:intergenic	40.0%
	CAGGAAAATAGCATCTCCTA+GGG	+	chr1_2:2815462-2815481	None:intergenic	40.0%
	AGTACCTTGAGAAAAATGGC+AGG	+	chr1_2:2815559-2815578	None:intergenic	40.0%
	TCGATATCGGACATAGACAT+CGG	+	chr1_2:2815728-2815747	None:intergenic	40.0%
!!	CAGTAATGAAGCACTGACAT+CGG	+	chr1_2:2815820-2815839	None:intergenic	40.0%
	ATTTATCATTCAAGCGGGTG+CGG	-	chr1_2:2816114-2816133	Msa0049450:intron	40.0%
	CTAATGGAGATGATGCAACA+TGG	+	chr1_2:2816225-2816244	None:intergenic	40.0%
	TACCAACTTACACTAGCAAC+TGG	-	chr1_2:2816256-2816275	Msa0049450:CDS	40.0%
	TTCCAGTTGCTAGTGTAAGT+TGG	+	chr1_2:2816261-2816280	None:intergenic	40.0%
	CATATTCCACTATATGGAGG+GGG	-	chr1_2:2816429-2816448	Msa0049450:CDS	40.0%
	GAACACTATCAATGGTTCAC+CGG	-	chr1_2:2816461-2816480	Msa0049450:CDS	40.0%
!	AGCTTATGTATTAGGGGCAT+TGG	-	chr1_2:2816527-2816546	Msa0049450:CDS	40.0%
!	TCTGCATAGCGTAAGTGTTG+GGG	+	chr1_2:2814929-2814948	None:intergenic	45.0%
	TTGTGTTAGGCTGCTTACCT+CGG	+	chr1_2:2815110-2815129	None:intergenic	45.0%
	TTGTCGGTGAGGATTGTGTT+AGG	+	chr1_2:2815123-2815142	None:intergenic	45.0%
	GAGTTGGAATGAGAATGAGG+AGG	+	chr1_2:2815268-2815287	None:intergenic	45.0%
!	GACGAGTTGGAATGAGAATG+AGG	+	chr1_2:2815271-2815290	None:intergenic	45.0%
	TTCTCATTCCAACTCGTCGT+TGG	-	chr1_2:2815273-2815292	Msa0049450:CDS	45.0%
	TCTCATTCCAACTCGTCGTT+GGG	-	chr1_2:2815274-2815293	Msa0049450:CDS	45.0%
	GAGGAAGATTCACGTGAATG+TGG	+	chr1_2:2815301-2815320	None:intergenic	45.0%
	CAAGCTTCCCATAACAGGAA+AGG	-	chr1_2:2815352-2815371	Msa0049450:CDS	45.0%
!	GATGATGATGATGCAGATCG+TGG	-	chr1_2:2815433-2815452	Msa0049450:intron	45.0%
	GCAGGAAAATAGCATCTCCT+AGG	+	chr1_2:2815463-2815482	None:intergenic	45.0%
	CATCGGGACAAAGAGATTGA+CGG	+	chr1_2:2815711-2815730	None:intergenic	45.0%
	CGATATCGGACATAGACATC+GGG	+	chr1_2:2815727-2815746	None:intergenic	45.0%
	ATTCATGGACACCATGCTAG+TGG	+	chr1_2:2816155-2816174	None:intergenic	45.0%
!	CACTTGTTGGCAAGTCGAAT+AGG	+	chr1_2:2816618-2816637	None:intergenic	45.0%
	AGACTCGATCATACCATACG+TGG	-	chr1_2:2816652-2816671	Msa0049450:CDS	45.0%
!	TCTGCATAGCGTAAGTGTTG+GGG	+	chr1_2:2814929-2814948	None:intergenic	45.0%
	TTGTGTTAGGCTGCTTACCT+CGG	+	chr1_2:2815110-2815129	None:intergenic	45.0%
	TTGTCGGTGAGGATTGTGTT+AGG	+	chr1_2:2815123-2815142	None:intergenic	45.0%
	GAGTTGGAATGAGAATGAGG+AGG	+	chr1_2:2815268-2815287	None:intergenic	45.0%
!	GACGAGTTGGAATGAGAATG+AGG	+	chr1_2:2815271-2815290	None:intergenic	45.0%
	TTCTCATTCCAACTCGTCGT+TGG	-	chr1_2:2815273-2815292	Msa0049450:CDS	45.0%
	TCTCATTCCAACTCGTCGTT+GGG	-	chr1_2:2815274-2815293	Msa0049450:CDS	45.0%
	GAGGAAGATTCACGTGAATG+TGG	+	chr1_2:2815301-2815320	None:intergenic	45.0%
	CAAGCTTCCCATAACAGGAA+AGG	-	chr1_2:2815352-2815371	Msa0049450:CDS	45.0%
!	GATGATGATGATGCAGATCG+TGG	-	chr1_2:2815433-2815452	Msa0049450:intron	45.0%
	GCAGGAAAATAGCATCTCCT+AGG	+	chr1_2:2815463-2815482	None:intergenic	45.0%
	CATCGGGACAAAGAGATTGA+CGG	+	chr1_2:2815711-2815730	None:intergenic	45.0%
	CGATATCGGACATAGACATC+GGG	+	chr1_2:2815727-2815746	None:intergenic	45.0%
	ATTCATGGACACCATGCTAG+TGG	+	chr1_2:2816155-2816174	None:intergenic	45.0%
!	CACTTGTTGGCAAGTCGAAT+AGG	+	chr1_2:2816618-2816637	None:intergenic	45.0%
	AGACTCGATCATACCATACG+TGG	-	chr1_2:2816652-2816671	Msa0049450:CDS	45.0%
	ATCACGTGATCTTGTCGGTG+AGG	+	chr1_2:2815134-2815153	None:intergenic	50.0%
	TCACCGACAAGATCACGTGA+TGG	-	chr1_2:2815133-2815152	Msa0049450:exon	50.0%
	CACCGACAAGATCACGTGAT+GGG	-	chr1_2:2815134-2815153	Msa0049450:exon	50.0%
	AGCCCATCACGTGATCTTGT+CGG	+	chr1_2:2815139-2815158	None:intergenic	50.0%
	CGTTGGAAGAGTCACGTGAT+GGG	+	chr1_2:2815186-2815205	None:intergenic	50.0%
	TCGTTGGAAGAGTCACGTGA+TGG	+	chr1_2:2815187-2815206	None:intergenic	50.0%
	TCACGTGACTCTTCCAACGA+CGG	-	chr1_2:2815187-2815206	Msa0049450:CDS	50.0%
!!	CGTTGTTTTCTCACCGTCGT+TGG	+	chr1_2:2815203-2815222	None:intergenic	50.0%
!!	ATCCCAACGGGCTTTGAAGT+GGG	+	chr1_2:2815243-2815262	None:intergenic	50.0%
	AATGAGGAGGAGATCCCAAC+GGG	+	chr1_2:2815255-2815274	None:intergenic	50.0%
	GAATGAGGAGGAGATCCCAA+CGG	+	chr1_2:2815256-2815275	None:intergenic	50.0%
	AGCTTGACTGCTCTTACGTG+AGG	+	chr1_2:2815338-2815357	None:intergenic	50.0%
	GCAGTCAAGCTTCCCATAAC+AGG	-	chr1_2:2815347-2815366	Msa0049450:CDS	50.0%
	GGAAAGGTAATTGGCGTCCT+TGG	-	chr1_2:2815368-2815387	Msa0049450:CDS	50.0%
	AGGTAATTGGCGTCCTTGGA+AGG	-	chr1_2:2815372-2815391	Msa0049450:CDS	50.0%
	ATGCAGATCGTGGATTCCCT+AGG	-	chr1_2:2815443-2815462	Msa0049450:intron	50.0%
	CAATGGTTCACCGGATGAAC+CGG	-	chr1_2:2816470-2816489	Msa0049450:CDS	50.0%
!!	GTCAATGGTACCGGTTCATC+CGG	+	chr1_2:2816483-2816502	None:intergenic	50.0%
	ATCACGTGATCTTGTCGGTG+AGG	+	chr1_2:2815134-2815153	None:intergenic	50.0%
	TCACCGACAAGATCACGTGA+TGG	-	chr1_2:2815133-2815152	Msa0049450:exon	50.0%
	CACCGACAAGATCACGTGAT+GGG	-	chr1_2:2815134-2815153	Msa0049450:exon	50.0%
	AGCCCATCACGTGATCTTGT+CGG	+	chr1_2:2815139-2815158	None:intergenic	50.0%
	CGTTGGAAGAGTCACGTGAT+GGG	+	chr1_2:2815186-2815205	None:intergenic	50.0%
	TCGTTGGAAGAGTCACGTGA+TGG	+	chr1_2:2815187-2815206	None:intergenic	50.0%
	TCACGTGACTCTTCCAACGA+CGG	-	chr1_2:2815187-2815206	Msa0049450:CDS	50.0%
!!	CGTTGTTTTCTCACCGTCGT+TGG	+	chr1_2:2815203-2815222	None:intergenic	50.0%
!!	ATCCCAACGGGCTTTGAAGT+GGG	+	chr1_2:2815243-2815262	None:intergenic	50.0%
	AATGAGGAGGAGATCCCAAC+GGG	+	chr1_2:2815255-2815274	None:intergenic	50.0%
	GAATGAGGAGGAGATCCCAA+CGG	+	chr1_2:2815256-2815275	None:intergenic	50.0%
	AGCTTGACTGCTCTTACGTG+AGG	+	chr1_2:2815338-2815357	None:intergenic	50.0%
	GCAGTCAAGCTTCCCATAAC+AGG	-	chr1_2:2815347-2815366	Msa0049450:CDS	50.0%
	GGAAAGGTAATTGGCGTCCT+TGG	-	chr1_2:2815368-2815387	Msa0049450:CDS	50.0%
	AGGTAATTGGCGTCCTTGGA+AGG	-	chr1_2:2815372-2815391	Msa0049450:CDS	50.0%
	ATGCAGATCGTGGATTCCCT+AGG	-	chr1_2:2815443-2815462	Msa0049450:intron	50.0%
	CAATGGTTCACCGGATGAAC+CGG	-	chr1_2:2816470-2816489	Msa0049450:CDS	50.0%
!!	GTCAATGGTACCGGTTCATC+CGG	+	chr1_2:2816483-2816502	None:intergenic	50.0%
!!	CGTAAGTGTTGGGGCATGCA+AGG	+	chr1_2:2814920-2814939	None:intergenic	55.0%
	GTTAGCCAAGACAGACTCCG+AGG	-	chr1_2:2815090-2815109	Msa0049450:three_prime_UTR	55.0%
	GCTTACCTCGGAGTCTGTCT+TGG	+	chr1_2:2815098-2815117	None:intergenic	55.0%
	AAGCCCACTTCAAAGCCCGT+TGG	-	chr1_2:2815237-2815256	Msa0049450:CDS	55.0%
	AGCCCACTTCAAAGCCCGTT+GGG	-	chr1_2:2815238-2815257	Msa0049450:CDS	55.0%
!!	GATCCCAACGGGCTTTGAAG+TGG	+	chr1_2:2815244-2815263	None:intergenic	55.0%
!	TGAGGCAGAGTATCTCGTGG+AGG	+	chr1_2:2815320-2815339	None:intergenic	55.0%
!	ACGTGAGGCAGAGTATCTCG+TGG	+	chr1_2:2815323-2815342	None:intergenic	55.0%
	GTCAGGAGTTGCCACTAGCA+TGG	-	chr1_2:2816141-2816160	Msa0049450:intron	55.0%
	CTTGCTCCCCCTCCATATAG+TGG	+	chr1_2:2816438-2816457	None:intergenic	55.0%
!!	CGTAAGTGTTGGGGCATGCA+AGG	+	chr1_2:2814920-2814939	None:intergenic	55.0%
	GTTAGCCAAGACAGACTCCG+AGG	-	chr1_2:2815090-2815109	Msa0049450:three_prime_UTR	55.0%
	GCTTACCTCGGAGTCTGTCT+TGG	+	chr1_2:2815098-2815117	None:intergenic	55.0%
	AAGCCCACTTCAAAGCCCGT+TGG	-	chr1_2:2815237-2815256	Msa0049450:CDS	55.0%
	AGCCCACTTCAAAGCCCGTT+GGG	-	chr1_2:2815238-2815257	Msa0049450:CDS	55.0%
!!	GATCCCAACGGGCTTTGAAG+TGG	+	chr1_2:2815244-2815263	None:intergenic	55.0%
!	TGAGGCAGAGTATCTCGTGG+AGG	+	chr1_2:2815320-2815339	None:intergenic	55.0%
!	ACGTGAGGCAGAGTATCTCG+TGG	+	chr1_2:2815323-2815342	None:intergenic	55.0%
	GTCAGGAGTTGCCACTAGCA+TGG	-	chr1_2:2816141-2816160	Msa0049450:intron	55.0%
	CTTGCTCCCCCTCCATATAG+TGG	+	chr1_2:2816438-2816457	None:intergenic	55.0%
	GGGCATGCAAGGACAGCTAG+TGG	+	chr1_2:2814909-2814928	None:intergenic	60.0%
	ATGTGGGCCCAACGACGAGT+TGG	+	chr1_2:2815284-2815303	None:intergenic	60.0%
	CAAGCGGGTGCGGATTTGTC+AGG	-	chr1_2:2816124-2816143	Msa0049450:intron	60.0%
	GGGCATGCAAGGACAGCTAG+TGG	+	chr1_2:2814909-2814928	None:intergenic	60.0%
	ATGTGGGCCCAACGACGAGT+TGG	+	chr1_2:2815284-2815303	None:intergenic	60.0%
	CAAGCGGGTGCGGATTTGTC+AGG	-	chr1_2:2816124-2816143	Msa0049450:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	2814880	2816911	2814880	ID=Msa0049450;Name=Msa0049450
chr1_2	mRNA	2814880	2816911	2814880	ID=Msa0049450-mRNA-1;Parent=Msa0049450;Name=Msa0049450-mRNA-1;_AED=0.04;_eAED=0.04;_QI=175\|1\|1\|1\|1\|1\|3\|258\|330
chr1_2	exon	2814880	2815425	2814880	ID=Msa0049450-mRNA-1:exon:593;Parent=Msa0049450-mRNA-1
chr1_2	exon	2815509	2815694	2815509	ID=Msa0049450-mRNA-1:exon:592;Parent=Msa0049450-mRNA-1
chr1_2	exon	2816218	2816911	2816218	ID=Msa0049450-mRNA-1:exon:591;Parent=Msa0049450-mRNA-1
chr1_2	five_prime_UTR	2816737	2816911	2816737	ID=Msa0049450-mRNA-1:five_prime_utr;Parent=Msa0049450-mRNA-1
chr1_2	CDS	2816218	2816736	2816218	ID=Msa0049450-mRNA-1:cds;Parent=Msa0049450-mRNA-1
chr1_2	CDS	2815509	2815694	2815509	ID=Msa0049450-mRNA-1:cds;Parent=Msa0049450-mRNA-1
chr1_2	CDS	2815138	2815425	2815138	ID=Msa0049450-mRNA-1:cds;Parent=Msa0049450-mRNA-1
chr1_2	three_prime_UTR	2814880	2815137	2814880	ID=Msa0049450-mRNA-1:three_prime_utr;Parent=Msa0049450-mRNA-1

Gene Sequence

>Msa0049450

ATGAAACCAGAAAACAACAACAACAACATTACAATGTTAGCCAAGACAGACTCCGAGGTAAGCAGCCTAACACAATCCTCACCGACAAGATCACGTGATGGGCTTCGTGCAGTTTACTACGTACAAAGCCCATCACGTGACTCTTCCAACGACGGTGAGAAAACAACGAACTCCTTTAACTCAAGCCCACTTCAAAGCCCGTTGGGATCTCCTCCTCATTCTCATTCCAACTCGTCGTTGGGCCCACATTCACGTGAATCTTCCTCCACGAGATACTCTGCCTCACGTAAGAGCAGTCAAGCTTCCCATAACAGGAAAGGTAATTGGCGTCCTTGGAAGGATCAGTTTAATGCCATTGAAGAAGAAGGACTTCTTGATGATGATGATGATGCAGATCGTGGATTCCCTAGGAGATGCTATTTTCCTGCTTTTGTTGTTTGTTTCTTTGTTCTCTTCACTGTTTTCTCTCTCATTCTTTGGGCTGCAAGTCGCCCTCAAAAACCTGCCATTTTTCTCAAGAGTATAACATTTGATAGATTTATCATTCAAGCGGGTGCGGATTTGTCAGGAGTTGCCACTAGCATGGTGTCCATGAATTCCACTGTGAAAATGACATTTAGAAACACTGCAACATTTTTTGGGGTCCATGTTGCATCATCTCCATTAGATCTCAATTATTACCAACTTACACTAGCAACTGGAAATATGCCTAAGTTTTATCAATCAAGAAAAAGTCAAAGATCTATTAAAGTGATGGTGAAAGGAAGTCATATTCCACTATATGGAGGGGGAGCAAGATTGAACACTATCAATGGTTCACCGGATGAACCGGTACCATTGACATTGAATATTATGGTGAGGTCAAAAGCTTATGTATTAGGGGCATTGGTGAAGCCAAGATTCAACAAGAAAATTGAGTGTGCATTGATTATGGATCCGAAGAAAATGGGTAAGCCTATTCGACTTGCCAACAAGTGTACGTATGAGTTATAG

Protein sequence

>Msa0049450

MKPENNNNNITMLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSPPHSHSNSSLGPHSRESSSTRYSASRKSSQASHNRKGNWRPWKDQFNAIEEEGLLDDDDDADRGFPRRCYFPAFVVCFFVLFTVFSLILWAASRPQKPAIFLKSITFDRFIIQAGADLSGVATSMVSMNSTVKMTFRNTATFFGVHVASSPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVKGSHIPLYGGGARLNTINGSPDEPVPLTLNIMVRSKAYVLGALVKPRFNKKIECALIMDPKKMGKPIRLANKCTYEL*