AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256800 MtrunA17_Chr4g0055391 91.437 327 17 1 1 316 1 327 0.0 580
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256800 AT5G47090.1 56.436 303 121 2 14 316 19 310 1.08e-107 316
Msa1256800 AT5G47090.2 56.436 303 121 2 14 316 19 310 1.08e-107 316

Find 124 sgRNAs with CRISPR-Local

Find 424 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGGAGGAGGGCTTATT+TGG 0.186213 8_2:+57061219 Msa1256800:CDS
GCCATTACAAGCAAAATAAA+TGG 0.217003 8_2:+57065816 Msa1256800:three_prime_UTR
TGAGTATGTTGGGAAGTTTC+AGG 0.226641 8_2:+57061312 Msa1256800:CDS
CACTCGATCTCTTGTTGATT+TGG 0.253650 8_2:+57065640 Msa1256800:three_prime_UTR
AAAATAAATGGATGTTGTTT+TGG 0.276543 8_2:+57065828 Msa1256800:three_prime_UTR
ATTACCAATCCACTCGCTTC+TGG 0.278878 8_2:-57061455 None:intergenic
GTCCCCAGTTCTCCCCAATT+TGG 0.281149 8_2:-57065616 None:intergenic
TTTCCCAAGTTTCCCAAATT+GGG 0.312227 8_2:+57065603 Msa1256800:three_prime_UTR
CTATACTGTACTTAAATTAA+CGG 0.317299 8_2:+57065532 Msa1256800:three_prime_UTR
AGAGGAAGAGGAGGAGGAGG+AGG 0.325244 8_2:+57061501 Msa1256800:CDS
ATGCAGCAGAAGTTTCTATT+AGG 0.331657 8_2:+57065318 Msa1256800:CDS
TGGATAAGTTGATGGTTGGT+GGG 0.338567 8_2:+57061239 Msa1256800:CDS
TTTCCCAAATTGGGGAGAAC+TGG 0.339198 8_2:+57065612 Msa1256800:three_prime_UTR
TCCCCAGTTCTCCCCAATTT+GGG 0.345044 8_2:-57065615 None:intergenic
TCTCTCTTCTGCATCAATAT+TGG 0.350041 8_2:-57065415 None:intergenic
CTCCAACTCTTCTGAAGTTA+AGG 0.352124 8_2:-57065268 None:intergenic
GGCTTATTTGGATAAGTTGA+TGG 0.354956 8_2:+57061231 Msa1256800:CDS
TACAGTATAGATTTGAAGAT+TGG 0.356169 8_2:-57065519 None:intergenic
GGAAGAAGAGGAAGAGGAGG+AGG 0.356366 8_2:+57061495 Msa1256800:CDS
AGAAGAGGAAGAGGAGGAGG+AGG 0.356540 8_2:+57061498 Msa1256800:CDS
TATCAAATCTAGAGAATCTA+TGG 0.357891 8_2:+57060954 Msa1256800:CDS
AAGATGATTACGAGATTAAC+TGG 0.368205 8_2:+57061125 Msa1256800:CDS
TTGGATAAGTTGATGGTTGG+TGG 0.372670 8_2:+57061238 Msa1256800:CDS
TCTCCCCAATTTGGGAAACT+TGG 0.374237 8_2:-57065607 None:intergenic
GGAGGAGGATGGCTAGGCCG+GGG 0.377867 8_2:+57061344 Msa1256800:CDS
GATTGGAACCGTAGCGTTCT+AGG 0.381445 8_2:-57061066 None:intergenic
GGGAAGTTTCAGGATAGGTT+TGG 0.382606 8_2:+57061322 Msa1256800:CDS
GGTTTCAAATTCAGTTAATT+CGG 0.382830 8_2:-57061098 None:intergenic
TGGGAGGAGGATGGCTAGGC+CGG 0.384998 8_2:+57061342 Msa1256800:CDS
TTACCAATCCACTCGCTTCT+GGG 0.400810 8_2:-57061454 None:intergenic
TAATTCGGTGGAAGTGAGAT+TGG 0.404173 8_2:-57061083 None:intergenic
GGAAGTTTCAGGATAGGTTT+GGG 0.406087 8_2:+57061323 Msa1256800:CDS
TTCAGGATAGGTTTGGGAGG+AGG 0.415738 8_2:+57061329 Msa1256800:CDS
CCCTCTGCCAATGGTCGTCA+AGG 0.418155 8_2:-57065389 None:intergenic
GAGATTGTGGCTAAGATTAG+AGG 0.429365 8_2:+57061409 Msa1256800:CDS
AGAGGAGGAAGAAGAGGAAG+AGG 0.429775 8_2:+57061489 Msa1256800:CDS
GTGGAAGATGGATTTGCGTT+GGG 0.431930 8_2:-57061014 None:intergenic
GGGAGGAGGATGGCTAGGCC+GGG 0.441186 8_2:+57061343 Msa1256800:CDS
TTGGGAAGGGAGTGTGGCGG+TGG 0.442489 8_2:-57060996 None:intergenic
AGAGATGATGTAACTGATAA+TGG 0.444063 8_2:+57065210 Msa1256800:CDS
AGAGGGGAGCAGGAGAGGAT+TGG 0.449394 8_2:+57061427 Msa1256800:CDS
CTCCCCAATTTGGGAAACTT+GGG 0.451058 8_2:-57065606 None:intergenic
GGTTGGATCCTGCCTCGCTC+TGG 0.454781 8_2:-57065247 None:intergenic
TGATTCAGCCAGAGCGAGGC+AGG 0.455817 8_2:+57065239 Msa1256800:CDS
ATTTGCATTATGAGTATGTT+GGG 0.456022 8_2:+57061302 Msa1256800:CDS
AGTGGAAGATGGATTTGCGT+TGG 0.459799 8_2:-57061015 None:intergenic
CCTCCCATGTCAATATTAAG+AGG 0.462218 8_2:+57065673 Msa1256800:three_prime_UTR
GAGGAGGATGGCTAGGCCGG+GGG 0.464868 8_2:+57061345 Msa1256800:CDS
GGAGGAAGAAGAGGAAGAGG+AGG 0.467961 8_2:+57061492 Msa1256800:CDS
AACCTTAACTTCAGAAGAGT+TGG 0.468520 8_2:+57065266 Msa1256800:CDS
TATTTGGATAAGTTGATGGT+TGG 0.469239 8_2:+57061235 Msa1256800:CDS
GGCTAAGATTAGAGGGGAGC+AGG 0.469678 8_2:+57061417 Msa1256800:CDS
AGATGGATTTGCGTTGGGAA+GGG 0.470800 8_2:-57061009 None:intergenic
AACTCTTCTGAAGTTAAGGT+TGG 0.471512 8_2:-57065264 None:intergenic
CGAAGTGAGCGAAGAAGCGA+AGG 0.474089 8_2:+57060913 Msa1256800:CDS
TTTGAGGAGGTGTGAGGAGG+CGG 0.475716 8_2:+57061387 Msa1256800:CDS
TTCCCAAATTGGGGAGAACT+GGG 0.475949 8_2:+57065613 Msa1256800:three_prime_UTR
CTCCTCAACTCCTCCGTCGT+CGG 0.476973 8_2:-57061178 None:intergenic
GGATAAGTTGATGGTTGGTG+GGG 0.480000 8_2:+57061240 Msa1256800:CDS
AGGCTGTGGTTGCGAAGAAT+AGG 0.481727 8_2:+57061203 Msa1256800:CDS
GTGCCATTGTCACTTACATC+AGG 0.495094 8_2:-57065168 None:intergenic
TATTTGCATTATGAGTATGT+TGG 0.495284 8_2:+57061301 Msa1256800:CDS
AGTGAGAAGAGAGTGGAAGA+TGG 0.496332 8_2:-57061026 None:intergenic
AAGATGGATTTGCGTTGGGA+AGG 0.513028 8_2:-57061010 None:intergenic
AACCGTAGCGTTCTAGGAAG+AGG 0.515964 8_2:-57061060 None:intergenic
GTGTGAGGAGGCGGAGATTG+TGG 0.522176 8_2:+57061396 Msa1256800:CDS
ATGAGACCCTTGACGACCAT+TGG 0.525545 8_2:+57065382 Msa1256800:CDS
TTTGCGTTGGGAAGGGAGTG+TGG 0.530414 8_2:-57061002 None:intergenic
ACATCATCTCTCACTCGAGC+TGG 0.535245 8_2:-57065198 None:intergenic
AGATTAGAGGGGAGCAGGAG+AGG 0.536513 8_2:+57061422 Msa1256800:CDS
TAGATTTGAAGATTGGCAAA+CGG 0.539449 8_2:-57065512 None:intergenic
ATGTTGGGAAGTTTCAGGAT+AGG 0.539526 8_2:+57061317 Msa1256800:CDS
CTTAACTTCAGAAGAGTTGG+AGG 0.541692 8_2:+57065269 Msa1256800:CDS
TTCCCAAGTTTCCCAAATTG+GGG 0.545554 8_2:+57065604 Msa1256800:three_prime_UTR
TTCAAATTCAGTTAATTCGG+TGG 0.545769 8_2:-57061095 None:intergenic
TGTAAGTGAATTGATTCATC+CGG 0.545854 8_2:-57065293 None:intergenic
TTGTCACTTACATCAGGTTG+AGG 0.546551 8_2:-57065162 None:intergenic
TATTGGCCTCCCTCTGCCAA+TGG 0.551435 8_2:-57065398 None:intergenic
GGATAGGTTTGGGAGGAGGA+TGG 0.552430 8_2:+57061333 Msa1256800:CDS
CTTCAGAAGAGTTGGAGGAC+CGG 0.555990 8_2:+57065274 Msa1256800:CDS
AGCGAGTGGATTGGTAATGA+AGG 0.556176 8_2:+57061460 Msa1256800:CDS
GATCTCTTGTTGATTTGGTG+AGG 0.563439 8_2:+57065645 Msa1256800:three_prime_UTR
GGTTTGGGAGGAGGATGGCT+AGG 0.565996 8_2:+57061338 Msa1256800:CDS
TGGTAATGAAGGACTTCAAG+AGG 0.567722 8_2:+57061471 Msa1256800:CDS
CCTCTGCCAATGGTCGTCAA+GGG 0.570477 8_2:-57065388 None:intergenic
GTCCGACGACGGAGGAGTTG+AGG 0.571986 8_2:+57061176 Msa1256800:CDS
GGAGTTGAGGAGGAAGGCTG+TGG 0.573275 8_2:+57061189 Msa1256800:CDS
AAATTTGCATGTGCTATAGC+TGG 0.577477 8_2:-57065884 None:intergenic
AGATTGTGGCTAAGATTAGA+GGG 0.578298 8_2:+57061410 Msa1256800:CDS
CTGTGGTTGCGAAGAATAGG+AGG 0.579748 8_2:+57061206 Msa1256800:CDS
CCCTTGACGACCATTGGCAG+AGG 0.580251 8_2:+57065388 Msa1256800:CDS
ACTTCAAGAGGAGGAAGAAG+AGG 0.587570 8_2:+57061483 Msa1256800:CDS
ACCGTAGCGTTCTAGGAAGA+GGG 0.588216 8_2:-57061059 None:intergenic
TGCACCTCTTAATATTGACA+TGG 0.588716 8_2:-57065677 None:intergenic
CGACGACGGAGGAGTTGAGG+AGG 0.594340 8_2:+57061179 Msa1256800:CDS
TAGCGTTCTAGGAAGAGGGA+TGG 0.596251 8_2:-57061055 None:intergenic
GGAGGCGATGAGAGAACGAG+AGG 0.599544 8_2:+57061276 Msa1256800:CDS
CAAATCAACAAGAGATCGAG+TGG 0.600743 8_2:-57065639 None:intergenic
GTATCAGACCACCTCTCCCC+CGG 0.601397 8_2:-57061361 None:intergenic
TCCCTCTTCCTAGAACGCTA+CGG 0.601725 8_2:+57061058 Msa1256800:CDS
ACTCAGTAGTAACTTGCTGT+TGG 0.603963 8_2:+57065569 Msa1256800:three_prime_UTR
TGGTTGCGAAGAATAGGAGG+AGG 0.610374 8_2:+57061209 Msa1256800:CDS
TGACGACCATTGGCAGAGGG+AGG 0.614328 8_2:+57065392 Msa1256800:CDS
AGATTAACTGGCATGTGACG+CGG 0.622675 8_2:+57061137 Msa1256800:CDS
CAACCTGATGTAAGTGACAA+TGG 0.623013 8_2:+57065165 Msa1256800:CDS
AGCGTTCTAGGAAGAGGGAT+GGG 0.626163 8_2:-57061054 None:intergenic
GGTCGCGAGTGAGAAGAGAG+TGG 0.633188 8_2:-57061033 None:intergenic
GCGGTGGATTGTTGTGCGCG+TGG 0.634112 8_2:-57060980 None:intergenic
CCTTGACGACCATTGGCAGA+GGG 0.641904 8_2:+57065389 Msa1256800:CDS
GTGCCCAGAAGCGAGTGGAT+TGG 0.643717 8_2:+57061451 Msa1256800:CDS
GACGGAGGAGTTGAGGAGGA+AGG 0.645151 8_2:+57061183 Msa1256800:CDS
GCGTTGGGAAGGGAGTGTGG+CGG 0.647521 8_2:-57060999 None:intergenic
GCACCTCTTAATATTGACAT+GGG 0.647641 8_2:-57065676 None:intergenic
AGTTTCAGGATAGGTTTGGG+AGG 0.649952 8_2:+57061326 Msa1256800:CDS
CATCTGATTCAGCCAGAGCG+AGG 0.656335 8_2:+57065235 Msa1256800:CDS
CCTCTTAATATTGACATGGG+AGG 0.662291 8_2:-57065673 None:intergenic
CTTGTTGAGTCCGACGACGG+AGG 0.670780 8_2:+57061168 Msa1256800:CDS
AAGCTTGTTGAGTCCGACGA+CGG 0.671431 8_2:+57061165 Msa1256800:CDS
TTGGTGTGCCCAGAAGCGAG+TGG 0.671616 8_2:+57061446 Msa1256800:CDS
TCCCAAATTGGGGAGAACTG+GGG 0.679752 8_2:+57065614 Msa1256800:three_prime_UTR
TAATGAAGGACTTCAAGAGG+AGG 0.688131 8_2:+57061474 Msa1256800:CDS
GGTTGCGAAGAATAGGAGGA+GGG 0.704365 8_2:+57061210 Msa1256800:CDS
AAATCAACAAGAGATCGAGT+GGG 0.712006 8_2:-57065638 None:intergenic
GATTGTGGCTAAGATTAGAG+GGG 0.720646 8_2:+57061411 Msa1256800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATTTGATTAAAAAAAT+AGG + chr8_2:57063633-57063652 Msa1256800:intron 10.0%
!!! CAGAATTTATATAATTTGTT+AGG + chr8_2:57062294-57062313 Msa1256800:intron 15.0%
!!! AATTTATATAATTTGTTAGG+TGG + chr8_2:57062297-57062316 Msa1256800:intron 15.0%
!! ATTAAAAAAATAGGAAAGAT+AGG + chr8_2:57063642-57063661 Msa1256800:intron 15.0%
!! TTGAATGTAATCAAATGTAT+AGG + chr8_2:57061692-57061711 Msa1256800:intron 20.0%
!!! AAGATTTTATTTTTCATGCT+AGG + chr8_2:57061795-57061814 Msa1256800:intron 20.0%
!!! TCTTATTTTGTTGCAAATAA+GGG - chr8_2:57062186-57062205 None:intergenic 20.0%
!!! TTCTTATTTTGTTGCAAATA+AGG - chr8_2:57062187-57062206 None:intergenic 20.0%
!! TTATTTGCAACAAAATAAGA+AGG + chr8_2:57062186-57062205 Msa1256800:intron 20.0%
!! AGATTCATATATGTTAATCT+GGG + chr8_2:57062381-57062400 Msa1256800:intron 20.0%
!! ATAAGAACGAATAAAACTAA+TGG - chr8_2:57062555-57062574 None:intergenic 20.0%
!! ATAACAAGTTCAAAATTGAT+AGG - chr8_2:57063319-57063338 None:intergenic 20.0%
!!! AACTTGTTATGTTCTATTTT+CGG + chr8_2:57063329-57063348 Msa1256800:intron 20.0%
!! TACTATACTCTTGATATAAA+AGG - chr8_2:57064306-57064325 None:intergenic 20.0%
!!! TTTTAATCTTGTATCATACA+AGG + chr8_2:57064929-57064948 Msa1256800:intron 20.0%
!! CTATACTGTACTTAAATTAA+CGG + chr8_2:57065532-57065551 Msa1256800:three_prime_UTR 20.0%
!!! AAAATAAATGGATGTTGTTT+TGG + chr8_2:57065828-57065847 Msa1256800:three_prime_UTR 20.0%
!!! GTTGTTTTGGATTAAATTAA+TGG + chr8_2:57065841-57065860 Msa1256800:three_prime_UTR 20.0%
! TATCAAATCTAGAGAATCTA+TGG + chr8_2:57060954-57060973 Msa1256800:CDS 25.0%
! GGTTTCAAATTCAGTTAATT+CGG - chr8_2:57061101-57061120 None:intergenic 25.0%
!! AATCTCGTAATCATCTTTTA+GGG - chr8_2:57061122-57061141 None:intergenic 25.0%
!! TAATCTCGTAATCATCTTTT+AGG - chr8_2:57061123-57061142 None:intergenic 25.0%
! TATTTGCATTATGAGTATGT+TGG + chr8_2:57061301-57061320 Msa1256800:CDS 25.0%
! ATTTGCATTATGAGTATGTT+GGG + chr8_2:57061302-57061321 Msa1256800:CDS 25.0%
! GTAACACAAATACATATCAA+AGG - chr8_2:57061747-57061766 None:intergenic 25.0%
!!! TAGCCATATTTTAACGTATA+GGG + chr8_2:57061853-57061872 Msa1256800:intron 25.0%
!! TACCTATAAGATGTTTTCAT+AGG + chr8_2:57062041-57062060 Msa1256800:intron 25.0%
! GAGATTCATATATGTTAATC+TGG + chr8_2:57062380-57062399 Msa1256800:intron 25.0%
! TAATGGAAGATAGAAAGTAA+AGG - chr8_2:57062538-57062557 None:intergenic 25.0%
!! TTTACGCAAACAATTTTGTA+AGG - chr8_2:57062776-57062795 None:intergenic 25.0%
! CATTAATCAATATTGTTGAC+CGG - chr8_2:57062843-57062862 None:intergenic 25.0%
!!! TCAGCTATTTTCATTTTTGT+GGG - chr8_2:57063492-57063511 None:intergenic 25.0%
! TTCTATTCTACTCAATTCTT+GGG - chr8_2:57063611-57063630 None:intergenic 25.0%
! TTTCTATTCTACTCAATTCT+TGG - chr8_2:57063612-57063631 None:intergenic 25.0%
!! ATGTATAGATAGGAAGATTT+TGG - chr8_2:57063762-57063781 None:intergenic 25.0%
! ATCTTCCTATCTATACATAA+TGG + chr8_2:57063764-57063783 Msa1256800:intron 25.0%
! TAGGGAAGTTATTAGTTAAT+GGG - chr8_2:57063801-57063820 None:intergenic 25.0%
! TTAGGGAAGTTATTAGTTAA+TGG - chr8_2:57063802-57063821 None:intergenic 25.0%
! TAGAGTAGTTAAAGTTGTTA+AGG - chr8_2:57063831-57063850 None:intergenic 25.0%
! TTATTCTATAGAGAAATGCT+AGG + chr8_2:57063857-57063876 Msa1256800:intron 25.0%
! ATTTCGACTAATAAAAGAGT+GGG + chr8_2:57063989-57064008 Msa1256800:intron 25.0%
! AGTGTTAGGATATAGAATAA+GGG - chr8_2:57064051-57064070 None:intergenic 25.0%
! TAGTGTTAGGATATAGAATA+AGG - chr8_2:57064052-57064071 None:intergenic 25.0%
! TATTCTATATCCTAACACTA+TGG + chr8_2:57064052-57064071 Msa1256800:intron 25.0%
! TATACTCTTGATATAAAAGG+TGG - chr8_2:57064303-57064322 None:intergenic 25.0%
! AGTATAGTAAATGACAAGAA+GGG + chr8_2:57064317-57064336 Msa1256800:intron 25.0%
! GTTTGATTAAATAGTAGAAG+AGG + chr8_2:57064657-57064676 Msa1256800:intron 25.0%
! ATCATGCAGTATATTCTAAA+TGG - chr8_2:57064872-57064891 None:intergenic 25.0%
! ATGACATGGTAAGAATAATA+TGG + chr8_2:57064960-57064979 Msa1256800:intron 25.0%
! TACAGTATAGATTTGAAGAT+TGG - chr8_2:57065522-57065541 None:intergenic 25.0%
!! AAACGTAAGTTTACAGTTTT+TGG - chr8_2:57065748-57065767 None:intergenic 25.0%
!!! TCCATTTATTTTGCTTGTAA+TGG - chr8_2:57065820-57065839 None:intergenic 25.0%
TTCAAATTCAGTTAATTCGG+TGG - chr8_2:57061098-57061117 None:intergenic 30.0%
AAGATGATTACGAGATTAAC+TGG + chr8_2:57061125-57061144 Msa1256800:CDS 30.0%
!! TATTTGGATAAGTTGATGGT+TGG + chr8_2:57061235-57061254 Msa1256800:CDS 30.0%
! CAAATGTATAGGTGTTATGT+TGG + chr8_2:57061703-57061722 Msa1256800:intron 30.0%
GCTAGGTCAATTATTCATTT+AGG + chr8_2:57061812-57061831 Msa1256800:intron 30.0%
!!! GTAGCCATATTTTAACGTAT+AGG + chr8_2:57061852-57061871 Msa1256800:intron 30.0%
TCTCCCTATACGTTAAAATA+TGG - chr8_2:57061859-57061878 None:intergenic 30.0%
ACTAAGTTGTTTATCCAAAC+AGG - chr8_2:57061937-57061956 None:intergenic 30.0%
AGCCTATGAAAACATCTTAT+AGG - chr8_2:57062046-57062065 None:intergenic 30.0%
TTATCTACTGCATAAACACT+TGG - chr8_2:57062139-57062158 None:intergenic 30.0%
ACCAATAATCTTTATGCCTA+TGG + chr8_2:57062219-57062238 Msa1256800:intron 30.0%
GCTTAGCTTAAATAGTTGAA+GGG + chr8_2:57062339-57062358 Msa1256800:intron 30.0%
TGAATATTGCAAAACATGAG+CGG - chr8_2:57062501-57062520 None:intergenic 30.0%
AAACAAAAAATTCAGAAGGC+CGG - chr8_2:57062598-57062617 None:intergenic 30.0%
!!! GCCTTCTGAATTTTTTGTTT+GGG + chr8_2:57062598-57062617 Msa1256800:intron 30.0%
!!! CCTTCTGAATTTTTTGTTTG+GGG + chr8_2:57062599-57062618 Msa1256800:intron 30.0%
!!! GAATTTTTTGTTTGGGGATA+TGG + chr8_2:57062605-57062624 Msa1256800:intron 30.0%
AGTTGAACTCATGTAGAAAA+TGG + chr8_2:57062653-57062672 Msa1256800:intron 30.0%
! AAGTTGGTCAATTCTATAAG+TGG - chr8_2:57062721-57062740 None:intergenic 30.0%
ATTGACCAACTTTACTATTC+TGG + chr8_2:57062729-57062748 Msa1256800:intron 30.0%
CAAAATTGTTTGCGTAAACT+CGG + chr8_2:57062778-57062797 Msa1256800:intron 30.0%
AAAATTGTTTGCGTAAACTC+GGG + chr8_2:57062779-57062798 Msa1256800:intron 30.0%
! ATCACTCAATTGCTGTATTT+TGG - chr8_2:57062905-57062924 None:intergenic 30.0%
TTTCTTGTTGCAAATTGCAA+TGG + chr8_2:57062938-57062957 Msa1256800:intron 30.0%
! TTTTACTAAAGAGTGAAGGA+TGG - chr8_2:57063061-57063080 None:intergenic 30.0%
! CAAGTTTTACTAAAGAGTGA+AGG - chr8_2:57063065-57063084 None:intergenic 30.0%
TTGAATTTACCATAGAGTGA+AGG - chr8_2:57063274-57063293 None:intergenic 30.0%
GGAATATGTGCAAGAATTTA+AGG + chr8_2:57063370-57063389 Msa1256800:intron 30.0%
TAAACAGAATGTGAAGAGTA+GGG + chr8_2:57063452-57063471 Msa1256800:intron 30.0%
!! TTTCATTTTTGTGGGATTAC+AGG - chr8_2:57063484-57063503 None:intergenic 30.0%
!! CTCAGCTATTTTCATTTTTG+TGG - chr8_2:57063493-57063512 None:intergenic 30.0%
CACAAAAATGAAAATAGCTG+AGG + chr8_2:57063491-57063510 Msa1256800:intron 30.0%
AATTTCATGCACTATGTGTT+AGG + chr8_2:57063583-57063602 Msa1256800:intron 30.0%
GTAGTGATTCTATTGGAAAA+GGG - chr8_2:57063695-57063714 None:intergenic 30.0%
AGTAGTGATTCTATTGGAAA+AGG - chr8_2:57063696-57063715 None:intergenic 30.0%
GAATAGAGTAGTGATTCTAT+TGG - chr8_2:57063702-57063721 None:intergenic 30.0%
TAGGACCATTATGTATAGAT+AGG - chr8_2:57063772-57063791 None:intergenic 30.0%
AGGGAAGTTATTAGTTAATG+GGG - chr8_2:57063800-57063819 None:intergenic 30.0%
GATTTCGACTAATAAAAGAG+TGG + chr8_2:57063988-57064007 Msa1256800:intron 30.0%
GTGTTAGGATATAGAATAAG+GGG - chr8_2:57064050-57064069 None:intergenic 30.0%
GAGTATAGTAAATGACAAGA+AGG + chr8_2:57064316-57064335 Msa1256800:intron 30.0%
GTATAGTAAATGACAAGAAG+GGG + chr8_2:57064318-57064337 Msa1256800:intron 30.0%
TATAGTAAATGACAAGAAGG+GGG + chr8_2:57064319-57064338 Msa1256800:intron 30.0%
GTTATAGATTTAGATGTCAC+TGG + chr8_2:57064592-57064611 Msa1256800:intron 30.0%
TTGGAAACAAAGAAAACCAT+CGG + chr8_2:57064715-57064734 Msa1256800:intron 30.0%
TGTAAACAATGAACAGTTTG+AGG + chr8_2:57064987-57065006 Msa1256800:intron 30.0%
GTAAACAATGAACAGTTTGA+GGG + chr8_2:57064988-57065007 Msa1256800:intron 30.0%
! AGTTTCTATCTTTTGAGCTT+TGG + chr8_2:57065046-57065065 Msa1256800:intron 30.0%
! GTTTCTATCTTTTGAGCTTT+GGG + chr8_2:57065047-57065066 Msa1256800:intron 30.0%
! TTTCTATCTTTTGAGCTTTG+GGG + chr8_2:57065048-57065067 Msa1256800:intron 30.0%
! GGGATTTCAAGTATAATGAA+TGG + chr8_2:57065068-57065087 Msa1256800:intron 30.0%
TGGTATAACCATATGATTTG+TGG + chr8_2:57065088-57065107 Msa1256800:intron 30.0%
AGAGATGATGTAACTGATAA+TGG + chr8_2:57065210-57065229 Msa1256800:CDS 30.0%
! TGTAAGTGAATTGATTCATC+CGG - chr8_2:57065296-57065315 None:intergenic 30.0%
TAGATTTGAAGATTGGCAAA+CGG - chr8_2:57065515-57065534 None:intergenic 30.0%
GCCATTACAAGCAAAATAAA+TGG + chr8_2:57065816-57065835 Msa1256800:three_prime_UTR 30.0%
! GGCTTATTTGGATAAGTTGA+TGG + chr8_2:57061231-57061250 Msa1256800:CDS 35.0%
AGATTGTGGCTAAGATTAGA+GGG + chr8_2:57061410-57061429 Msa1256800:CDS 35.0%
CATGCACTAAACACATTCAT+CGG + chr8_2:57061625-57061644 Msa1256800:intron 35.0%
TTAACGTATAGGGAGAAAAC+AGG + chr8_2:57061863-57061882 Msa1256800:intron 35.0%
ACAGGAAGAGAACAATTCAA+TGG + chr8_2:57061881-57061900 Msa1256800:intron 35.0%
GTTGATCAATTGCTAGACTT+AGG + chr8_2:57061910-57061929 Msa1256800:intron 35.0%
GCCATAGGCATAAAGATTAT+TGG - chr8_2:57062223-57062242 None:intergenic 35.0%
AAATAATTGCTGCAAGCCAT+AGG - chr8_2:57062238-57062257 None:intergenic 35.0%
! ATTTGTTAGGTGGTTGTAGT+TGG + chr8_2:57062307-57062326 Msa1256800:intron 35.0%
GGCTTAGCTTAAATAGTTGA+AGG + chr8_2:57062338-57062357 Msa1256800:intron 35.0%
TTGAAGGGATAGAACTAGAA+GGG + chr8_2:57062354-57062373 Msa1256800:intron 35.0%
GAATATTGCAAAACATGAGC+GGG - chr8_2:57062500-57062519 None:intergenic 35.0%
TGCTTCTATGTGATAAAGTC+CGG + chr8_2:57062576-57062595 Msa1256800:intron 35.0%
!!! GGCCTTCTGAATTTTTTGTT+TGG + chr8_2:57062597-57062616 Msa1256800:intron 35.0%
CCCCAAACAAAAAATTCAGA+AGG - chr8_2:57062602-57062621 None:intergenic 35.0%
!! TTTTTGTTTGGGGATATGGA+CGG + chr8_2:57062609-57062628 Msa1256800:intron 35.0%
TAGAAAATGGCCTTTGATCA+TGG + chr8_2:57062666-57062685 Msa1256800:intron 35.0%
AGAAAATGGCCTTTGATCAT+GGG + chr8_2:57062667-57062686 Msa1256800:intron 35.0%
GATAGCCAGAATAGTAAAGT+TGG - chr8_2:57062737-57062756 None:intergenic 35.0%
TGCATAGAATTGTGAGTTTG+AGG + chr8_2:57062808-57062827 Msa1256800:intron 35.0%
GATTAATGATTATTCACCCC+AGG + chr8_2:57062855-57062874 Msa1256800:intron 35.0%
AGATAGGTTTCAGCTAATCA+TGG - chr8_2:57062995-57063014 None:intergenic 35.0%
GAAAAGATTTGCAGATCACA+AGG - chr8_2:57063090-57063109 None:intergenic 35.0%
TTTACCATAGAGTGAAGGAT+GGG - chr8_2:57063269-57063288 None:intergenic 35.0%
ATTTACCATAGAGTGAAGGA+TGG - chr8_2:57063270-57063289 None:intergenic 35.0%
GTAAACAGAATGTGAAGAGT+AGG + chr8_2:57063451-57063470 Msa1256800:intron 35.0%
AGGTACTAGATTTAGAAGAG+CGG + chr8_2:57063511-57063530 Msa1256800:intron 35.0%
!!! GAAGATTTTGGAGTTAGAGA+GGG - chr8_2:57063750-57063769 None:intergenic 35.0%
ATTAGTTAATGGGGGTAGTT+AGG - chr8_2:57063791-57063810 None:intergenic 35.0%
GGGAAGTTATTAGTTAATGG+GGG - chr8_2:57063799-57063818 None:intergenic 35.0%
AGTTGTTAAGGAGCTAGTTA+GGG - chr8_2:57063819-57063838 None:intergenic 35.0%
AAGTTGTTAAGGAGCTAGTT+AGG - chr8_2:57063820-57063839 None:intergenic 35.0%
GAAATGAGTACCACATAAAG+TGG - chr8_2:57063948-57063967 None:intergenic 35.0%
TGGTACTCATTTCAAAAGTG+TGG + chr8_2:57063955-57063974 Msa1256800:intron 35.0%
TATTAGTCGAAATCCATGTG+AGG - chr8_2:57063982-57064001 None:intergenic 35.0%
TATATCCTAACACTATGGAG+TGG + chr8_2:57064057-57064076 Msa1256800:intron 35.0%
AGATACAGAGTAGTATCTGA+AGG + chr8_2:57064103-57064122 Msa1256800:intron 35.0%
GATACAGAGTAGTATCTGAA+GGG + chr8_2:57064104-57064123 Msa1256800:intron 35.0%
ATACAGAGTAGTATCTGAAG+GGG + chr8_2:57064105-57064124 Msa1256800:intron 35.0%
! AGAATGCGAGGCTTTATATT+GGG - chr8_2:57064163-57064182 None:intergenic 35.0%
! AAGAATGCGAGGCTTTATAT+TGG - chr8_2:57064164-57064183 None:intergenic 35.0%
AATATAAAGCCTCGCATTCT+TGG + chr8_2:57064163-57064182 Msa1256800:intron 35.0%
AGAAGATCTACAAGTGAATG+AGG + chr8_2:57064436-57064455 Msa1256800:intron 35.0%
AGAAGAGGTTGAACTTAGAA+TGG + chr8_2:57064672-57064691 Msa1256800:intron 35.0%
AAACAAAGAAAACCATCGGA+AGG + chr8_2:57064719-57064738 Msa1256800:intron 35.0%
AGTTGAGAATATCTAGAGAC+AGG - chr8_2:57064841-57064860 None:intergenic 35.0%
AGCTCAAAAGATAGAAACTG+TGG - chr8_2:57065045-57065064 None:intergenic 35.0%
TGATCAGTCCACAAATCATA+TGG - chr8_2:57065099-57065118 None:intergenic 35.0%
!!! TTTCCTTTTTTTTCCGCTAC+TGG + chr8_2:57065127-57065146 Msa1256800:intron 35.0%
!! AACTCTTCTGAAGTTAAGGT+TGG - chr8_2:57065267-57065286 None:intergenic 35.0%
AACCTTAACTTCAGAAGAGT+TGG + chr8_2:57065266-57065285 Msa1256800:CDS 35.0%
ATGCAGCAGAAGTTTCTATT+AGG + chr8_2:57065318-57065337 Msa1256800:CDS 35.0%
TCTCTCTTCTGCATCAATAT+TGG - chr8_2:57065418-57065437 None:intergenic 35.0%
! TTTTCCCAAGTTTCCCAAAT+TGG + chr8_2:57065602-57065621 Msa1256800:three_prime_UTR 35.0%
TTTCCCAAGTTTCCCAAATT+GGG + chr8_2:57065603-57065622 Msa1256800:three_prime_UTR 35.0%
AAATCAACAAGAGATCGAGT+GGG - chr8_2:57065641-57065660 None:intergenic 35.0%
GCACCTCTTAATATTGACAT+GGG - chr8_2:57065679-57065698 None:intergenic 35.0%
TGCACCTCTTAATATTGACA+TGG - chr8_2:57065680-57065699 None:intergenic 35.0%
! TAATTCGGTGGAAGTGAGAT+TGG - chr8_2:57061086-57061105 None:intergenic 40.0%
!! TTGGATAAGTTGATGGTTGG+TGG + chr8_2:57061238-57061257 Msa1256800:CDS 40.0%
!! TGGATAAGTTGATGGTTGGT+GGG + chr8_2:57061239-57061258 Msa1256800:CDS 40.0%
!!! GGTTGGTGGGGTTTATTTTT+CGG + chr8_2:57061252-57061271 Msa1256800:CDS 40.0%
TGAGTATGTTGGGAAGTTTC+AGG + chr8_2:57061312-57061331 Msa1256800:CDS 40.0%
ATGTTGGGAAGTTTCAGGAT+AGG + chr8_2:57061317-57061336 Msa1256800:CDS 40.0%
GGAAGTTTCAGGATAGGTTT+GGG + chr8_2:57061323-57061342 Msa1256800:CDS 40.0%
GAGATTGTGGCTAAGATTAG+AGG + chr8_2:57061409-57061428 Msa1256800:CDS 40.0%
GATTGTGGCTAAGATTAGAG+GGG + chr8_2:57061411-57061430 Msa1256800:CDS 40.0%
! TGGTAATGAAGGACTTCAAG+AGG + chr8_2:57061471-57061490 Msa1256800:CDS 40.0%
TAATGAAGGACTTCAAGAGG+AGG + chr8_2:57061474-57061493 Msa1256800:CDS 40.0%
TGTTGAAAAAGACGAGACTG+TGG + chr8_2:57061537-57061556 Msa1256800:intron 40.0%
! GTTGCAAATAAGGGCTTGTT+TGG - chr8_2:57062177-57062196 None:intergenic 40.0%
GTTGAAGGGATAGAACTAGA+AGG + chr8_2:57062353-57062372 Msa1256800:intron 40.0%
TTGTGAACAGAGAAACCCTT+TGG + chr8_2:57062432-57062451 Msa1256800:intron 40.0%
AACATGAGCGGGAAAAAAAG+AGG - chr8_2:57062489-57062508 None:intergenic 40.0%
TATGGACGGAGTTAAAACCT+TGG + chr8_2:57062623-57062642 Msa1256800:intron 40.0%
ATGGACGGAGTTAAAACCTT+GGG + chr8_2:57062624-57062643 Msa1256800:intron 40.0%
CAATGGTATCCCATGATCAA+AGG - chr8_2:57062679-57062698 None:intergenic 40.0%
TCACTCTTGATCTTAGGCAA+TGG - chr8_2:57062696-57062715 None:intergenic 40.0%
GAGTTTGAGGACAATTGAAC+CGG + chr8_2:57062821-57062840 Msa1256800:intron 40.0%
TAATGATTATTCACCCCAGG+AGG + chr8_2:57062858-57062877 Msa1256800:intron 40.0%
!! TAGAAAGCGTTAAACCTCCT+GGG - chr8_2:57062875-57062894 None:intergenic 40.0%
!! TTAGAAAGCGTTAAACCTCC+TGG - chr8_2:57062876-57062895 None:intergenic 40.0%
GTTGGGTTCAATCAACACAT+TGG - chr8_2:57062973-57062992 None:intergenic 40.0%
GGTTTCAGCTAATCATGGTT+GGG - chr8_2:57062990-57063009 None:intergenic 40.0%
AGGTTTCAGCTAATCATGGT+TGG - chr8_2:57062991-57063010 None:intergenic 40.0%
ACTAAAGAGTGAAGGATGGT+GGG - chr8_2:57063057-57063076 None:intergenic 40.0%
TACTAAAGAGTGAAGGATGG+TGG - chr8_2:57063058-57063077 None:intergenic 40.0%
TTCTCGTTGCAAGTTTGCAA+TGG + chr8_2:57063146-57063165 Msa1256800:intron 40.0%
GAATGAACCCAACCAAGATT+AGG + chr8_2:57063189-57063208 Msa1256800:intron 40.0%
GGTTTCACCTAATCTTGGTT+GGG - chr8_2:57063199-57063218 None:intergenic 40.0%
AGGTTTCACCTAATCTTGGT+TGG - chr8_2:57063200-57063219 None:intergenic 40.0%
ACCAAGATTAGGTGAAACCT+AGG + chr8_2:57063200-57063219 Msa1256800:intron 40.0%
ACCTAGGTTTCACCTAATCT+TGG - chr8_2:57063204-57063223 None:intergenic 40.0%
TTACCATAGAGTGAAGGATG+GGG - chr8_2:57063268-57063287 None:intergenic 40.0%
TATTCCTCCACTGTAGTTGA+TGG - chr8_2:57063356-57063375 None:intergenic 40.0%
! GCAAGAATTTAAGGTCCAAG+TGG + chr8_2:57063379-57063398 Msa1256800:intron 40.0%
GTGACTAGGAGTAAGTTACT+GGG + chr8_2:57063413-57063432 Msa1256800:intron 40.0%
TGACTAGGAGTAAGTTACTG+GGG + chr8_2:57063414-57063433 Msa1256800:intron 40.0%
! TAAGTTACTGGGGTATTTCC+TGG + chr8_2:57063424-57063443 Msa1256800:intron 40.0%
! AAGTTACTGGGGTATTTCCT+GGG + chr8_2:57063425-57063444 Msa1256800:intron 40.0%
TACTAGATTTAGAAGAGCGG+TGG + chr8_2:57063514-57063533 Msa1256800:intron 40.0%
AAAGAGAACTCTCCTCCAAA+GGG + chr8_2:57063665-57063684 Msa1256800:intron 40.0%
!!! GGAAGATTTTGGAGTTAGAG+AGG - chr8_2:57063751-57063770 None:intergenic 40.0%
!! ATAGAATAAGGGGAGTGTTC+TGG - chr8_2:57064040-57064059 None:intergenic 40.0%
CTGAATAATGCTTGAAACCC+AGG - chr8_2:57064085-57064104 None:intergenic 40.0%
AAACCACGAAACAGATCCAA+TGG - chr8_2:57064133-57064152 None:intergenic 40.0%
ATCTGTCTTAGTAGTAGGGT+AGG - chr8_2:57064211-57064230 None:intergenic 40.0%
GTGCATCTGTCTTAGTAGTA+GGG - chr8_2:57064215-57064234 None:intergenic 40.0%
TGTGCATCTGTCTTAGTAGT+AGG - chr8_2:57064216-57064235 None:intergenic 40.0%
ACTACTAAGACAGATGCACA+AGG + chr8_2:57064216-57064235 Msa1256800:intron 40.0%
! CTCTCTTTTCTAGACAACAG+TGG - chr8_2:57064395-57064414 None:intergenic 40.0%
GTTGTCTAGAAAAGAGAGCA+TGG + chr8_2:57064397-57064416 Msa1256800:intron 40.0%
AGTACAGATTCTAATGCCGA+GGG + chr8_2:57064512-57064531 Msa1256800:intron 40.0%
TTGGCAATTGAGAAATCCCT+CGG - chr8_2:57064531-57064550 None:intergenic 40.0%
ATTGCCAAGCTGGAATTTCT+AGG + chr8_2:57064543-57064562 Msa1256800:intron 40.0%
TTGCCAAGCTGGAATTTCTA+GGG + chr8_2:57064544-57064563 Msa1256800:intron 40.0%
AGAGGTTGAACTTAGAATGG+AGG + chr8_2:57064675-57064694 Msa1256800:intron 40.0%
GAGGTTGAACTTAGAATGGA+GGG + chr8_2:57064676-57064695 Msa1256800:intron 40.0%
AGGTTGAACTTAGAATGGAG+GGG + chr8_2:57064677-57064696 Msa1256800:intron 40.0%
AGAATATCTAGAGACAGGAC+TGG - chr8_2:57064836-57064855 None:intergenic 40.0%
ACAAGGAGCAATCAATGACA+TGG + chr8_2:57064946-57064965 Msa1256800:intron 40.0%
! TTGTCACTTACATCAGGTTG+AGG - chr8_2:57065165-57065184 None:intergenic 40.0%
CAACCTGATGTAAGTGACAA+TGG + chr8_2:57065165-57065184 Msa1256800:CDS 40.0%
!! CTCCAACTCTTCTGAAGTTA+AGG - chr8_2:57065271-57065290 None:intergenic 40.0%
CTTAACTTCAGAAGAGTTGG+AGG + chr8_2:57065269-57065288 Msa1256800:CDS 40.0%
!! ACTCAGTAGTAACTTGCTGT+TGG + chr8_2:57065569-57065588 Msa1256800:three_prime_UTR 40.0%
TTCCCAAGTTTCCCAAATTG+GGG + chr8_2:57065604-57065623 Msa1256800:three_prime_UTR 40.0%
CAAATCAACAAGAGATCGAG+TGG - chr8_2:57065642-57065661 None:intergenic 40.0%
! CACTCGATCTCTTGTTGATT+TGG + chr8_2:57065640-57065659 Msa1256800:three_prime_UTR 40.0%
!! GATCTCTTGTTGATTTGGTG+AGG + chr8_2:57065645-57065664 Msa1256800:three_prime_UTR 40.0%
CCTCTTAATATTGACATGGG+AGG - chr8_2:57065676-57065695 None:intergenic 40.0%
CCTCCCATGTCAATATTAAG+AGG + chr8_2:57065673-57065692 Msa1256800:three_prime_UTR 40.0%
! AGATGGATTTGCGTTGGGAA+GGG - chr8_2:57061012-57061031 None:intergenic 45.0%
! AAGATGGATTTGCGTTGGGA+AGG - chr8_2:57061013-57061032 None:intergenic 45.0%
! GTGGAAGATGGATTTGCGTT+GGG - chr8_2:57061017-57061036 None:intergenic 45.0%
! AGTGGAAGATGGATTTGCGT+TGG - chr8_2:57061018-57061037 None:intergenic 45.0%
AGTGAGAAGAGAGTGGAAGA+TGG - chr8_2:57061029-57061048 None:intergenic 45.0%
AGATTAACTGGCATGTGACG+CGG + chr8_2:57061137-57061156 Msa1256800:CDS 45.0%
GAATAGGAGGAGGGCTTATT+TGG + chr8_2:57061219-57061238 Msa1256800:CDS 45.0%
!! GGATAAGTTGATGGTTGGTG+GGG + chr8_2:57061240-57061259 Msa1256800:CDS 45.0%
!! TGGTGGGGTTTATTTTTCGG+AGG + chr8_2:57061255-57061274 Msa1256800:CDS 45.0%
!! TGGGGTTTATTTTTCGGAGG+AGG + chr8_2:57061258-57061277 Msa1256800:CDS 45.0%
GGGAAGTTTCAGGATAGGTT+TGG + chr8_2:57061322-57061341 Msa1256800:CDS 45.0%
AGTTTCAGGATAGGTTTGGG+AGG + chr8_2:57061326-57061345 Msa1256800:CDS 45.0%
! GGTGGTCTGATACACTTTTG+AGG + chr8_2:57061371-57061390 Msa1256800:CDS 45.0%
!! GGTCTGATACACTTTTGAGG+AGG + chr8_2:57061374-57061393 Msa1256800:CDS 45.0%
!! TACACTTTTGAGGAGGTGTG+AGG + chr8_2:57061381-57061400 Msa1256800:CDS 45.0%
TTACCAATCCACTCGCTTCT+GGG - chr8_2:57061457-57061476 None:intergenic 45.0%
ATTACCAATCCACTCGCTTC+TGG - chr8_2:57061458-57061477 None:intergenic 45.0%
!! AGCGAGTGGATTGGTAATGA+AGG + chr8_2:57061460-57061479 Msa1256800:CDS 45.0%
ACTTCAAGAGGAGGAAGAAG+AGG + chr8_2:57061483-57061502 Msa1256800:CDS 45.0%
TGAAAAAGACGAGACTGTGG+AGG + chr8_2:57061540-57061559 Msa1256800:intron 45.0%
TTTAGTGCATGTGTCGTGTC+TGG - chr8_2:57061616-57061635 None:intergenic 45.0%
TGCTAGACTTAGGTCCTGTT+TGG + chr8_2:57061920-57061939 Msa1256800:intron 45.0%
TAGGTGGTTGTAGTTGGAAC+AGG + chr8_2:57062313-57062332 Msa1256800:intron 45.0%
TGGTTGTAGTTGGAACAGGA+GGG + chr8_2:57062317-57062336 Msa1256800:intron 45.0%
AAGGGATAGAACTAGAAGGG+AGG + chr8_2:57062357-57062376 Msa1256800:intron 45.0%
AGGGATAGAACTAGAAGGGA+GGG + chr8_2:57062358-57062377 Msa1256800:intron 45.0%
CAGAGAAACCCTTTGGTGAA+AGG + chr8_2:57062439-57062458 Msa1256800:intron 45.0%
TTCCAAGGCCTTTCACCAAA+GGG - chr8_2:57062450-57062469 None:intergenic 45.0%
TGAGCGGGAAAAAAAGAGGA+GGG - chr8_2:57062485-57062504 None:intergenic 45.0%
ATGAGCGGGAAAAAAAGAGG+AGG - chr8_2:57062486-57062505 None:intergenic 45.0%
TGGACGGAGTTAAAACCTTG+GGG + chr8_2:57062625-57062644 Msa1256800:intron 45.0%
GTGGCATCACTCTTGATCTT+AGG - chr8_2:57062702-57062721 None:intergenic 45.0%
!! AGAAAGCGTTAAACCTCCTG+GGG - chr8_2:57062874-57062893 None:intergenic 45.0%
GCAAATTGCAATGGACCAAC+AGG + chr8_2:57062947-57062966 Msa1256800:intron 45.0%
! CAATCAACACATTGGCCTGT+TGG - chr8_2:57062965-57062984 None:intergenic 45.0%
!! GGATTTAGCTTGGTGGAGAT+AGG - chr8_2:57063011-57063030 None:intergenic 45.0%
TAAATTACCCTCGTTGGAGC+TGG - chr8_2:57063032-57063051 None:intergenic 45.0%
TGGGACTAAATTACCCTCGT+TGG - chr8_2:57063038-57063057 None:intergenic 45.0%
AAGTTTGCAATGGACCCATC+AGG + chr8_2:57063156-57063175 Msa1256800:intron 45.0%
! ATTCACCTCATTGGCCTGAT+GGG - chr8_2:57063173-57063192 None:intergenic 45.0%
GTTGGGTTCATTCACCTCAT+TGG - chr8_2:57063182-57063201 None:intergenic 45.0%
AGCTGAATCCAGTACCAATG+AGG + chr8_2:57063230-57063249 Msa1256800:intron 45.0%
GCTGAATCCAGTACCAATGA+GGG + chr8_2:57063231-57063250 Msa1256800:intron 45.0%
TAAGTTGCCCTCATTGGTAC+TGG - chr8_2:57063241-57063260 None:intergenic 45.0%
TTTCGGACCATCAACTACAG+TGG + chr8_2:57063346-57063365 Msa1256800:intron 45.0%
GGTGACTAGGAGTAAGTTAC+TGG + chr8_2:57063412-57063431 Msa1256800:intron 45.0%
GAAAGAGAACTCTCCTCCAA+AGG + chr8_2:57063664-57063683 Msa1256800:intron 45.0%
TTGGAAAAGGGAGAACCCTT+TGG - chr8_2:57063683-57063702 None:intergenic 45.0%
TCAAACACCCACTCTCCTAT+TGG + chr8_2:57063901-57063920 Msa1256800:intron 45.0%
CAAACACCCACTCTCCTATT+GGG + chr8_2:57063902-57063921 Msa1256800:intron 45.0%
GTTTCACCCAATAGGAGAGT+GGG - chr8_2:57063911-57063930 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+CGG - chr8_2:57063934-57063953 None:intergenic 45.0%
! TCAAAAGTGTGGTCCTCACA+TGG + chr8_2:57063966-57063985 Msa1256800:intron 45.0%
AGGTACCACTCCATAGTGTT+AGG - chr8_2:57064065-57064084 None:intergenic 45.0%
TAACACTATGGAGTGGTACC+TGG + chr8_2:57064064-57064083 Msa1256800:intron 45.0%
AACACTATGGAGTGGTACCT+GGG + chr8_2:57064065-57064084 Msa1256800:intron 45.0%
AGTATCTGAAGGGGAACCAT+TGG + chr8_2:57064114-57064133 Msa1256800:intron 45.0%
GAACCATTGGATCTGTTTCG+TGG + chr8_2:57064127-57064146 Msa1256800:intron 45.0%
GGCAAGAACTACTTCAAGCA+GGG - chr8_2:57064190-57064209 None:intergenic 45.0%
AGGCAAGAACTACTTCAAGC+AGG - chr8_2:57064191-57064210 None:intergenic 45.0%
ACTAAGACAGATGCACAAGG+AGG + chr8_2:57064219-57064238 Msa1256800:intron 45.0%
TTCTAGACAACAGTGGTCTC+AGG - chr8_2:57064388-57064407 None:intergenic 45.0%
CAGTACAGATTCTAATGCCG+AGG + chr8_2:57064511-57064530 Msa1256800:intron 45.0%
GGATTTCTCAATTGCCAAGC+TGG + chr8_2:57064533-57064552 Msa1256800:intron 45.0%
! TGCCAAGCTGGAATTTCTAG+GGG + chr8_2:57064545-57064564 Msa1256800:intron 45.0%
! AAGCTGGAATTTCTAGGGGA+CGG + chr8_2:57064549-57064568 Msa1256800:intron 45.0%
GGTTGAACTTAGAATGGAGG+GGG + chr8_2:57064678-57064697 Msa1256800:intron 45.0%
! GGGGGATTCAGATGTAGTTT+TGG + chr8_2:57064696-57064715 Msa1256800:intron 45.0%
TGTGAGAATTCTCCTTCCGA+TGG - chr8_2:57064734-57064753 None:intergenic 45.0%
! CTGCCAGTAGCGGAAAAAAA+AGG - chr8_2:57065133-57065152 None:intergenic 45.0%
! GTGCCATTGTCACTTACATC+AGG - chr8_2:57065171-57065190 None:intergenic 45.0%
CTCCCCAATTTGGGAAACTT+GGG - chr8_2:57065609-57065628 None:intergenic 45.0%
TCTCCCCAATTTGGGAAACT+TGG - chr8_2:57065610-57065629 None:intergenic 45.0%
TTTCCCAAATTGGGGAGAAC+TGG + chr8_2:57065612-57065631 Msa1256800:three_prime_UTR 45.0%
TTCCCAAATTGGGGAGAACT+GGG + chr8_2:57065613-57065632 Msa1256800:three_prime_UTR 45.0%
!! AGCGTTCTAGGAAGAGGGAT+GGG - chr8_2:57061057-57061076 None:intergenic 50.0%
!! TAGCGTTCTAGGAAGAGGGA+TGG - chr8_2:57061058-57061077 None:intergenic 50.0%
TCCCTCTTCCTAGAACGCTA+CGG + chr8_2:57061058-57061077 Msa1256800:CDS 50.0%
!! ACCGTAGCGTTCTAGGAAGA+GGG - chr8_2:57061062-57061081 None:intergenic 50.0%
!! AACCGTAGCGTTCTAGGAAG+AGG - chr8_2:57061063-57061082 None:intergenic 50.0%
GATTGGAACCGTAGCGTTCT+AGG - chr8_2:57061069-57061088 None:intergenic 50.0%
!! AAGCTTGTTGAGTCCGACGA+CGG + chr8_2:57061165-57061184 Msa1256800:CDS 50.0%
AGGCTGTGGTTGCGAAGAAT+AGG + chr8_2:57061203-57061222 Msa1256800:CDS 50.0%
CTGTGGTTGCGAAGAATAGG+AGG + chr8_2:57061206-57061225 Msa1256800:CDS 50.0%
TGGTTGCGAAGAATAGGAGG+AGG + chr8_2:57061209-57061228 Msa1256800:CDS 50.0%
GGTTGCGAAGAATAGGAGGA+GGG + chr8_2:57061210-57061229 Msa1256800:CDS 50.0%
TTCAGGATAGGTTTGGGAGG+AGG + chr8_2:57061329-57061348 Msa1256800:CDS 50.0%
!! ACTTTTGAGGAGGTGTGAGG+AGG + chr8_2:57061384-57061403 Msa1256800:CDS 50.0%
AGAGGAGGAAGAAGAGGAAG+AGG + chr8_2:57061489-57061508 Msa1256800:CDS 50.0%
GTGGTTGTAGTTGGAACAGG+AGG + chr8_2:57062316-57062335 Msa1256800:intron 50.0%
AACCCTTTGGTGAAAGGCCT+TGG + chr8_2:57062445-57062464 Msa1256800:intron 50.0%
CTTCCAAGGCCTTTCACCAA+AGG - chr8_2:57062451-57062470 None:intergenic 50.0%
GGGAGAGAATTCTGCTTCCA+AGG - chr8_2:57062465-57062484 None:intergenic 50.0%
GGACGGAGTTAAAACCTTGG+GGG + chr8_2:57062626-57062645 Msa1256800:intron 50.0%
GAGTTCAACTGAATCCCCCA+AGG - chr8_2:57062643-57062662 None:intergenic 50.0%
!! TGGAGCTGGATTTAGCTTGG+TGG - chr8_2:57063018-57063037 None:intergenic 50.0%
CGTTGGAGCTGGATTTAGCT+TGG - chr8_2:57063021-57063040 None:intergenic 50.0%
AGCTAAATCCAGCTCCAACG+AGG + chr8_2:57063021-57063040 Msa1256800:intron 50.0%
GCTAAATCCAGCTCCAACGA+GGG + chr8_2:57063022-57063041 Msa1256800:intron 50.0%
! CATTCACCTCATTGGCCTGA+TGG - chr8_2:57063174-57063193 None:intergenic 50.0%
! TGGTACTGGATTCAGCTCAG+TGG - chr8_2:57063227-57063246 None:intergenic 50.0%
TCACCAATGCTTGAGCCACT+TGG - chr8_2:57063397-57063416 None:intergenic 50.0%
!! TGGCTCAAGCATTGGTGACT+AGG + chr8_2:57063399-57063418 Msa1256800:intron 50.0%
! TTACTGGGGTATTTCCTGGG+AGG + chr8_2:57063428-57063447 Msa1256800:intron 50.0%
! TACTGGGGTATTTCCTGGGA+GGG + chr8_2:57063429-57063448 Msa1256800:intron 50.0%
CACATTCTGTTTACCCTCCC+AGG - chr8_2:57063445-57063464 None:intergenic 50.0%
GAAAAGGGAGAACCCTTTGG+AGG - chr8_2:57063680-57063699 None:intergenic 50.0%
GGTTTCACCCAATAGGAGAG+TGG - chr8_2:57063912-57063931 None:intergenic 50.0%
CTATTGGGTGAAACCCGTGT+GGG + chr8_2:57063917-57063936 Msa1256800:intron 50.0%
TAAAGTGGTGAGACCCACAC+GGG - chr8_2:57063933-57063952 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG + chr8_2:57063935-57063954 Msa1256800:intron 50.0%
! GCGAGGCTTTATATTGGGCT+GGG - chr8_2:57064158-57064177 None:intergenic 50.0%
! TGCGAGGCTTTATATTGGGC+TGG - chr8_2:57064159-57064178 None:intergenic 50.0%
CTCTGTTGGCCACAATGGAA+CGG - chr8_2:57064350-57064369 None:intergenic 50.0%
TCCATTGTGGCCAACAGAGT+TGG + chr8_2:57064351-57064370 Msa1256800:intron 50.0%
TCCAACTCTGTTGGCCACAA+TGG - chr8_2:57064355-57064374 None:intergenic 50.0%
TGCATCAGCTCCAACTCTGT+TGG - chr8_2:57064364-57064383 None:intergenic 50.0%
GTAATGCTTCTTCTGCCCCT+CGG - chr8_2:57064480-57064499 None:intergenic 50.0%
!! GAGGGGCAGAAGAAGCATTA+CGG + chr8_2:57064479-57064498 Msa1256800:intron 50.0%
!! AGGGGCAGAAGAAGCATTAC+GGG + chr8_2:57064480-57064499 Msa1256800:intron 50.0%
GTCCCCTAGAAATTCCAGCT+TGG - chr8_2:57064550-57064569 None:intergenic 50.0%
ACATCATCTCTCACTCGAGC+TGG - chr8_2:57065201-57065220 None:intergenic 50.0%
CTTCAGAAGAGTTGGAGGAC+CGG + chr8_2:57065274-57065293 Msa1256800:CDS 50.0%
TCCCAAATTGGGGAGAACTG+GGG + chr8_2:57065614-57065633 Msa1256800:three_prime_UTR 50.0%
TCCCCAGTTCTCCCCAATTT+GGG - chr8_2:57065618-57065637 None:intergenic 50.0%
CGAAGTGAGCGAAGAAGCGA+AGG + chr8_2:57060913-57060932 Msa1256800:CDS 55.0%
TTTGCGTTGGGAAGGGAGTG+TGG - chr8_2:57061005-57061024 None:intergenic 55.0%
GGATAGGTTTGGGAGGAGGA+TGG + chr8_2:57061333-57061352 Msa1256800:CDS 55.0%
! TTTGAGGAGGTGTGAGGAGG+CGG + chr8_2:57061387-57061406 Msa1256800:CDS 55.0%
GGCTAAGATTAGAGGGGAGC+AGG + chr8_2:57061417-57061436 Msa1256800:CDS 55.0%
AGATTAGAGGGGAGCAGGAG+AGG + chr8_2:57061422-57061441 Msa1256800:CDS 55.0%
GGAGGAAGAAGAGGAAGAGG+AGG + chr8_2:57061492-57061511 Msa1256800:CDS 55.0%
GGAAGAAGAGGAAGAGGAGG+AGG + chr8_2:57061495-57061514 Msa1256800:CDS 55.0%
AGAAGAGGAAGAGGAGGAGG+AGG + chr8_2:57061498-57061517 Msa1256800:CDS 55.0%
ATGGACCCATCAGGCCAATG+AGG + chr8_2:57063165-57063184 Msa1256800:intron 55.0%
GGATTCAGCTCAGTGGACCT+AGG - chr8_2:57063220-57063239 None:intergenic 55.0%
GGCGACTAAGTTGCCCTCAT+TGG - chr8_2:57063247-57063266 None:intergenic 55.0%
TCGCCCCATCCTTCACTCTA+TGG + chr8_2:57063262-57063281 Msa1256800:intron 55.0%
CGGACCATCAACTACAGTGG+AGG + chr8_2:57063349-57063368 Msa1256800:intron 55.0%
GGTCCAAGTGGCTCAAGCAT+TGG + chr8_2:57063391-57063410 Msa1256800:intron 55.0%
GGAGAGTGGGTGTTTGAGAG+TGG - chr8_2:57063898-57063917 None:intergenic 55.0%
CCACACGGGTTTCACCCAAT+AGG - chr8_2:57063919-57063938 None:intergenic 55.0%
CCTATTGGGTGAAACCCGTG+TGG + chr8_2:57063916-57063935 Msa1256800:intron 55.0%
AAGCAGGGTCCAAGAATGCG+AGG - chr8_2:57064175-57064194 None:intergenic 55.0%
! GGGGTACTTCCGTTCCATTG+TGG + chr8_2:57064338-57064357 Msa1256800:intron 55.0%
ACAGAGAGACTGTCCAACCG+AGG + chr8_2:57064460-57064479 Msa1256800:intron 55.0%
CAGAGAGACTGTCCAACCGA+GGG + chr8_2:57064461-57064480 Msa1256800:intron 55.0%
AGAGAGACTGTCCAACCGAG+GGG + chr8_2:57064462-57064481 Msa1256800:intron 55.0%
GTGCATGTCTCTGCCAGTAG+CGG - chr8_2:57065143-57065162 None:intergenic 55.0%
CATCTGATTCAGCCAGAGCG+AGG + chr8_2:57065235-57065254 Msa1256800:CDS 55.0%
! TATTGGCCTCCCTCTGCCAA+TGG - chr8_2:57065401-57065420 None:intergenic 55.0%
GTCCCCAGTTCTCCCCAATT+TGG - chr8_2:57065619-57065638 None:intergenic 55.0%
GGTCGCGAGTGAGAAGAGAG+TGG - chr8_2:57061036-57061055 None:intergenic 60.0%
CTTGTTGAGTCCGACGACGG+AGG + chr8_2:57061168-57061187 Msa1256800:CDS 60.0%
CTCCTCAACTCCTCCGTCGT+CGG - chr8_2:57061181-57061200 None:intergenic 60.0%
GACGGAGGAGTTGAGGAGGA+AGG + chr8_2:57061183-57061202 Msa1256800:CDS 60.0%
GGAGTTGAGGAGGAAGGCTG+TGG + chr8_2:57061189-57061208 Msa1256800:CDS 60.0%
GGAGGCGATGAGAGAACGAG+AGG + chr8_2:57061276-57061295 Msa1256800:CDS 60.0%
GGTTTGGGAGGAGGATGGCT+AGG + chr8_2:57061338-57061357 Msa1256800:CDS 60.0%
GTATCAGACCACCTCTCCCC+CGG - chr8_2:57061364-57061383 None:intergenic 60.0%
GTGTGAGGAGGCGGAGATTG+TGG + chr8_2:57061396-57061415 Msa1256800:CDS 60.0%
AGAGGGGAGCAGGAGAGGAT+TGG + chr8_2:57061427-57061446 Msa1256800:CDS 60.0%
TTGGTGTGCCCAGAAGCGAG+TGG + chr8_2:57061446-57061465 Msa1256800:CDS 60.0%
GTGCCCAGAAGCGAGTGGAT+TGG + chr8_2:57061451-57061470 Msa1256800:CDS 60.0%
AGAGGAAGAGGAGGAGGAGG+AGG + chr8_2:57061501-57061520 Msa1256800:CDS 60.0%
GCTGCACCACTGTGGAACAG+AGG + chr8_2:57064273-57064292 Msa1256800:intron 60.0%
GGCACTCCTCTGTTCCACAG+TGG - chr8_2:57064282-57064301 None:intergenic 60.0%
TGCTTCTTCTGCCCCTCGGT+TGG - chr8_2:57064476-57064495 None:intergenic 60.0%
TGATTCAGCCAGAGCGAGGC+AGG + chr8_2:57065239-57065258 Msa1256800:CDS 60.0%
TGACGACCATTGGCAGAGGG+AGG + chr8_2:57065392-57065411 Msa1256800:CDS 60.0%
!! GCGGTGGATTGTTGTGCGCG+TGG - chr8_2:57060983-57061002 None:intergenic 65.0%
! TTGGGAAGGGAGTGTGGCGG+TGG - chr8_2:57060999-57061018 None:intergenic 65.0%
! GCGTTGGGAAGGGAGTGTGG+CGG - chr8_2:57061002-57061021 None:intergenic 65.0%
GTCCGACGACGGAGGAGTTG+AGG + chr8_2:57061176-57061195 Msa1256800:CDS 65.0%
CGACGACGGAGGAGTTGAGG+AGG + chr8_2:57061179-57061198 Msa1256800:CDS 65.0%
TGGGAGGAGGATGGCTAGGC+CGG + chr8_2:57061342-57061361 Msa1256800:CDS 65.0%
GGAAGAGGAGGAGGAGGAGG+AGG + chr8_2:57061504-57061523 Msa1256800:CDS 65.0%
AGCTCGCAGCTGCACCACTG+TGG + chr8_2:57064265-57064284 Msa1256800:intron 65.0%
GGTTGGATCCTGCCTCGCTC+TGG - chr8_2:57065250-57065269 None:intergenic 65.0%
GGGAGGAGGATGGCTAGGCC+GGG + chr8_2:57061343-57061362 Msa1256800:CDS 70.0%
GGAGGAGGATGGCTAGGCCG+GGG + chr8_2:57061344-57061363 Msa1256800:CDS 70.0%
GAGGAGGATGGCTAGGCCGG+GGG + chr8_2:57061345-57061364 Msa1256800:CDS 70.0%
GGATGGCTAGGCCGGGGGAG+AGG + chr8_2:57061350-57061369 Msa1256800:CDS 75.0%
TGGCTAGGCCGGGGGAGAGG+TGG + chr8_2:57061353-57061372 Msa1256800:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 57060890 57065904 57060890 ID=Msa1256800;Name=Msa1256800
chr8_2 mRNA 57060890 57065904 57060890 ID=Msa1256800-mRNA-1;Parent=Msa1256800;Name=Msa1256800-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0.5|1|1|1|2|449|316
chr8_2 exon 57060890 57061537 57060890 ID=Msa1256800-mRNA-1:exon:17547;Parent=Msa1256800-mRNA-1
chr8_2 exon 57065153 57065904 57065153 ID=Msa1256800-mRNA-1:exon:17548;Parent=Msa1256800-mRNA-1
chr8_2 CDS 57060890 57061537 57060890 ID=Msa1256800-mRNA-1:cds;Parent=Msa1256800-mRNA-1
chr8_2 CDS 57065153 57065455 57065153 ID=Msa1256800-mRNA-1:cds;Parent=Msa1256800-mRNA-1
chr8_2 three_prime_UTR 57065456 57065904 57065456 ID=Msa1256800-mRNA-1:three_prime_utr;Parent=Msa1256800-mRNA-1
Gene Sequence

>Msa1256800

ATGGAAGTGAAGCAGAAGAAAAACGAAGTGAGCGAAGAAGCGAAGGAGAAAATCTCAGAAAGACTATCAAATCTAGAGAATCTATGGTTTCCACGCGCACAACAATCCACCGCCACACTCCCTTCCCAACGCAAATCCATCTTCCACTCTCTTCTCACTCGCGACCCATCCCTCTTCCTAGAACGCTACGGTTCCAATCTCACTTCCACCGAATTAACTGAATTTGAAACCCTAAAAGATGATTACGAGATTAACTGGCATGTGACGCGGTTGCAAAGCTTGTTGAGTCCGACGACGGAGGAGTTGAGGAGGAAGGCTGTGGTTGCGAAGAATAGGAGGAGGGCTTATTTGGATAAGTTGATGGTTGGTGGGGTTTATTTTTCGGAGGAGGCGATGAGAGAACGAGAGGCGTATTTGCATTATGAGTATGTTGGGAAGTTTCAGGATAGGTTTGGGAGGAGGATGGCTAGGCCGGGGGAGAGGTGGTCTGATACACTTTTGAGGAGGTGTGAGGAGGCGGAGATTGTGGCTAAGATTAGAGGGGAGCAGGAGAGGATTGGTGTGCCCAGAAGCGAGTGGATTGGTAATGAAGGACTTCAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGATAGACATGCACCTCAACCTGATGTAAGTGACAATGGCACATCTGATCCAGCTCGAGTGAGAGATGATGTAACTGATAATGGCACATCTGATTCAGCCAGAGCGAGGCAGGATCCAACCTTAACTTCAGAAGAGTTGGAGGACCGGATGAATCAATTCACTTACATCATGCAGCAGAAGTTTCTATTAGGAGAAGATCACGAACATGTAGATTATGCTAAAATAGATAATGATGAGACCCTTGACGACCATTGGCAGAGGGAGGCCAATATTGATGCAGAAGAGAGATATTTTGCTGATGATTAA
Protein sequence

>Msa1256800

MEVKQKKNEVSEEAKEKISERLSNLENLWFPRAQQSTATLPSQRKSIFHSLLTRDPSLFLERYGSNLTSTELTEFETLKDDYEINWHVTRLQSLLSPTTEELRRKAVVAKNRRRAYLDKLMVGGVYFSEEAMREREAYLHYEYVGKFQDRFGRRMARPGERWSDTLLRRCEEAEIVAKIRGEQERIGVPRSEWIGNEGLQEEEEEEEEEEEEEEEDRHAPQPDVSDNGTSDPARVRDDVTDNGTSDSARARQDPTLTSEELEDRMNQFTYIMQQKFLLGEDHEHVDYAKIDNDETLDDHWQREANIDAEERYFADD*