Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257270 | XP_003616150.2 | 91.803 | 488 | 29 | 1 | 1 | 477 | 1 | 488 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257270 | sp|Q6NQJ8|SDG40_ARATH | 56.584 | 486 | 197 | 6 | 1 | 476 | 1 | 482 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257270 | G7KFS1 | 91.803 | 488 | 29 | 1 | 1 | 477 | 1 | 488 | 0.0 | 910 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1257270 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257270 | Msa1281900 | 0.865990 | 3.954369e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257270 | MtrunA17_Chr5g0433621 | 91.803 | 488 | 29 | 1 | 1 | 477 | 1 | 488 | 0.0 | 910 |
| Msa1257270 | MtrunA17_Chr3g0120751 | 25.564 | 266 | 155 | 11 | 51 | 303 | 92 | 327 | 1.37e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257270 | AT5G17240.1 | 56.584 | 486 | 197 | 6 | 1 | 476 | 1 | 482 | 0.0 | 562 |
| Msa1257270 | AT5G17240.2 | 57.178 | 411 | 166 | 5 | 76 | 476 | 1 | 411 | 1.99e-169 | 484 |
| Msa1257270 | AT3G55080.1 | 24.252 | 301 | 171 | 11 | 11 | 304 | 46 | 296 | 4.22e-11 | 65.5 |
Find 98 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGTCATTAAAGCAGATTT+TGG | 0.219025 | 8_2:-57865392 | None:intergenic |
| CTCTTCTCTCTCCTCTGTTC+AGG | 0.231576 | 8_2:+57865466 | Msa1257270:CDS |
| CAACACTCTCTTTCCTCTCT+TGG | 0.235733 | 8_2:+57865103 | Msa1257270:CDS |
| TAATTGTTGTAATGCAAATA+AGG | 0.241006 | 8_2:+57869448 | Msa1257270:three_prime_UTR |
| GTCGGACGTCTTGCATATTC+TGG | 0.242969 | 8_2:+57869043 | Msa1257270:CDS |
| TTGTTAAACTTATGTCATTC+AGG | 0.257944 | 8_2:+57869221 | Msa1257270:CDS |
| AACATTTAAGGCATGGCTTT+GGG | 0.315162 | 8_2:+57867572 | Msa1257270:CDS |
| CTCTTATTGCAATGTAATAC+TGG | 0.321869 | 8_2:+57869399 | Msa1257270:CDS |
| CACTTCTACTTCATGGTCTA+AGG | 0.325752 | 8_2:+57868928 | Msa1257270:CDS |
| TTGTAGGGGATATGATTTAC+TGG | 0.351981 | 8_2:+57869484 | Msa1257270:three_prime_UTR |
| GGGCAACCCCTCATAATAAA+AGG | 0.358661 | 8_2:+57869014 | Msa1257270:CDS |
| CTATGTACACTTCTACTTCA+TGG | 0.363522 | 8_2:+57868921 | Msa1257270:CDS |
| GACTACACTCCAATGCATTC+AGG | 0.375734 | 8_2:-57869174 | None:intergenic |
| TAACATTTAAGGCATGGCTT+TGG | 0.385694 | 8_2:+57867571 | Msa1257270:CDS |
| AATAAGAGATACAATCAATA+AGG | 0.390425 | 8_2:-57869384 | None:intergenic |
| TAATTAAACAAGTCACCAAC+AGG | 0.396024 | 8_2:-57868312 | None:intergenic |
| GAAAGAAGCTCATGCCTTGA+TGG | 0.398662 | 8_2:+57867521 | Msa1257270:CDS |
| CGAGAAGGTCAATGGATAGA+TGG | 0.399385 | 8_2:+57869323 | Msa1257270:CDS |
| AGTCATAACTTTGCGGCAAA+TGG | 0.404610 | 8_2:-57867273 | None:intergenic |
| GCACCTGGAGAGGACCTATC+TGG | 0.423204 | 8_2:+57868339 | Msa1257270:CDS |
| ATGAAATCATCGTTATGAAA+TGG | 0.434118 | 8_2:+57869086 | Msa1257270:CDS |
| AGAATGTTGCAGTAGAGGTT+TGG | 0.444175 | 8_2:+57865325 | Msa1257270:intron |
| CAATCAAATGGAGACAAGAA+TGG | 0.446355 | 8_2:+57868384 | Msa1257270:CDS |
| GAATGTTGCAGTAGAGGTTT+GGG | 0.448690 | 8_2:+57865326 | Msa1257270:intron |
| AGGAAAGAGAGTGTTGAGAA+TGG | 0.462418 | 8_2:-57865096 | None:intergenic |
| TATGACTTGCTAGCCATGTT+TGG | 0.465171 | 8_2:+57867289 | Msa1257270:CDS |
| ATGGCTTTGGGCTGCTGCAA+CGG | 0.467154 | 8_2:+57867584 | Msa1257270:CDS |
| CTACCTTTCCTCACTCTGGC+GGG | 0.467292 | 8_2:+57865143 | Msa1257270:CDS |
| GTGCTGTGAGAGATCTTAAG+AGG | 0.468743 | 8_2:+57865348 | Msa1257270:CDS |
| GTTTGCTTGTTATACGAAGT+TGG | 0.470769 | 8_2:+57867214 | Msa1257270:CDS |
| CACCAGGTTCTATTATGCTA+TGG | 0.472726 | 8_2:+57868809 | Msa1257270:intron |
| CTCCAATGCATTCAGGAGTA+AGG | 0.484839 | 8_2:-57869167 | None:intergenic |
| TGTTAAACTTATGTCATTCA+GGG | 0.485910 | 8_2:+57869222 | Msa1257270:CDS |
| TATGAAAACGAGAAGGTCAA+TGG | 0.486866 | 8_2:+57869315 | Msa1257270:CDS |
| TAGCCGTCTCATGGAGGCTC+AGG | 0.491464 | 8_2:+57869350 | Msa1257270:CDS |
| TGCGGCAAATGGACGAGGTA+AGG | 0.498856 | 8_2:-57867262 | None:intergenic |
| GCTAGGACAAATTACAAGAA+AGG | 0.501930 | 8_2:+57868495 | Msa1257270:CDS |
| AAATTACAAGAAAGGCGATC+AGG | 0.502432 | 8_2:+57868503 | Msa1257270:CDS |
| AAACATCAGTTCTTCCATCA+AGG | 0.504879 | 8_2:-57867535 | None:intergenic |
| AGCTATGTCTTGCTGTGAAT+AGG | 0.511400 | 8_2:+57865441 | Msa1257270:CDS |
| GTTTCTACCTTTCCTCACTC+TGG | 0.514945 | 8_2:+57865139 | Msa1257270:CDS |
| TACATTATGAGCTTCTAAGA+AGG | 0.520589 | 8_2:-57869257 | None:intergenic |
| TTGGCAAGGGAAAGACTTCA+AGG | 0.520668 | 8_2:+57867233 | Msa1257270:CDS |
| TTGTTAAATCTGATATTCCA+AGG | 0.526387 | 8_2:-57865060 | Msa1257260:intron |
| AAGAGAGTGTTGAGAATGGT+CGG | 0.528406 | 8_2:-57865092 | None:intergenic |
| GATGGAAATTAGCCGTCTCA+TGG | 0.528999 | 8_2:+57869341 | Msa1257270:CDS |
| GTACGAGTTCTGAAAGAGCT+AGG | 0.531868 | 8_2:+57864980 | Msa1257270:five_prime_UTR |
| GAAAGAGCTAGGTTAGAAGA+TGG | 0.535954 | 8_2:+57864991 | Msa1257270:exon |
| GCTGGTTGTTTATGCCCTGT+TGG | 0.537691 | 8_2:+57868297 | Msa1257270:CDS |
| AACTTTGCGGCAAATGGACG+AGG | 0.537904 | 8_2:-57867267 | None:intergenic |
| GCTAGCAAGTCATAACTTTG+CGG | 0.538816 | 8_2:-57867280 | None:intergenic |
| AAGAACATGGAAGGTTTGAA+AGG | 0.542145 | 8_2:+57865017 | Msa1257270:CDS |
| TACTAGCTGCGTTACGACTG+TGG | 0.542432 | 8_2:+57868993 | Msa1257270:CDS |
| TTTCTCAAATTCACCAAACA+TGG | 0.542605 | 8_2:-57867302 | None:intergenic |
| TACCTTACTCCTGAATGCAT+TGG | 0.549106 | 8_2:+57869165 | Msa1257270:CDS |
| GAAGTAGAAGTGTACATAGC+AGG | 0.549201 | 8_2:-57868917 | None:intergenic |
| AAGAACTGATGTTTAAGCCT+CGG | 0.551132 | 8_2:+57867544 | Msa1257270:CDS |
| CTCAGAGACTAACTGATGGT+GGG | 0.556902 | 8_2:+57868439 | Msa1257270:intron |
| TTGTTTAATTACGATGCACC+TGG | 0.559289 | 8_2:+57868324 | Msa1257270:CDS |
| ATACCAGATAGGTCCTCTCC+AGG | 0.561435 | 8_2:-57868342 | None:intergenic |
| ATCAGGTGGATGAAGCTATG+TGG | 0.568564 | 8_2:+57867460 | Msa1257270:intron |
| TTTGAGCTTCTTGAACACTA+CGG | 0.569876 | 8_2:+57868845 | Msa1257270:CDS |
| GTGTACATAGCAGGTTCCAA+AGG | 0.569923 | 8_2:-57868908 | None:intergenic |
| TCTACCTTTCCTCACTCTGG+CGG | 0.572108 | 8_2:+57865142 | Msa1257270:CDS |
| TTGTTATACGAAGTTGGCAA+GGG | 0.572713 | 8_2:+57867220 | Msa1257270:CDS |
| CTCGGACATTGCATATACCA+TGG | 0.573706 | 8_2:+57868268 | Msa1257270:CDS |
| CTACGTCGTCAATACCAGAT+AGG | 0.574667 | 8_2:-57868353 | None:intergenic |
| CTTGTTATACGAAGTTGGCA+AGG | 0.575123 | 8_2:+57867219 | Msa1257270:CDS |
| TCAGGTGGATGAAGCTATGT+GGG | 0.588137 | 8_2:+57867461 | Msa1257270:intron |
| TCGGACATTGCATATACCAT+GGG | 0.588653 | 8_2:+57868269 | Msa1257270:CDS |
| GGTTTGAAAGGTTCTTAACA+TGG | 0.589973 | 8_2:+57865029 | Msa1257270:CDS |
| TCTCAGAGACTAACTGATGG+TGG | 0.592968 | 8_2:+57868438 | Msa1257270:intron |
| GCCAGTTACCCGCCAGAGTG+AGG | 0.593667 | 8_2:-57865151 | None:intergenic |
| GTATCGTCTTCAATAGATGT+TGG | 0.593968 | 8_2:-57869145 | None:intergenic |
| TAGAAGATGGAACAAGAACA+TGG | 0.594815 | 8_2:+57865004 | Msa1257270:exon |
| TAATTACGATGCACCTGGAG+AGG | 0.595408 | 8_2:+57868329 | Msa1257270:CDS |
| TGCTGTGAGAGATCTTAAGA+GGG | 0.596123 | 8_2:+57865349 | Msa1257270:CDS |
| TGTACATAGCAGGTTCCAAA+GGG | 0.596868 | 8_2:-57868907 | None:intergenic |
| TAACAGAGACTGAACTTGCA+GGG | 0.598802 | 8_2:-57867329 | None:intergenic |
| CATTCTCAGAGACTAACTGA+TGG | 0.601638 | 8_2:+57868435 | Msa1257270:intron |
| CATATACCATGGGATGAAGC+TGG | 0.602506 | 8_2:+57868279 | Msa1257270:CDS |
| AGATGGAACAAGAACATGGA+AGG | 0.604086 | 8_2:+57865008 | Msa1257270:exon |
| CATAATAAAAGGAGGTCTGT+CGG | 0.606789 | 8_2:+57869025 | Msa1257270:CDS |
| AAATGGAGACAAGAATGGAA+TGG | 0.608545 | 8_2:+57868389 | Msa1257270:CDS |
| ATACCTGAGCCTCCATGAGA+CGG | 0.619857 | 8_2:-57869353 | None:intergenic |
| GCAGAGAGAATGACCAAGAG+AGG | 0.631070 | 8_2:-57865116 | None:intergenic |
| AAACAACCAGCTTCATCCCA+TGG | 0.633574 | 8_2:-57868285 | None:intergenic |
| TTTCATCTATGAAAACGAGA+AGG | 0.633735 | 8_2:+57869308 | Msa1257270:CDS |
| ACTAGCTGCGTTACGACTGT+GGG | 0.639311 | 8_2:+57868994 | Msa1257270:CDS |
| TTAACATGGACATCACACCT+TGG | 0.645130 | 8_2:+57865043 | Msa1257270:CDS |
| TCACTCTATATCCATCCCAA+CGG | 0.653728 | 8_2:+57868953 | Msa1257270:CDS |
| TTACCCGCCAGAGTGAGGAA+AGG | 0.662573 | 8_2:-57865146 | None:intergenic |
| CAACCCCTCATAATAAAAGG+AGG | 0.668522 | 8_2:+57869017 | Msa1257270:CDS |
| GCAGCTAGTAGCGCAAACGA+AGG | 0.670133 | 8_2:-57868980 | None:intergenic |
| GGAAATTAGCCGTCTCATGG+AGG | 0.680251 | 8_2:+57869344 | Msa1257270:CDS |
| GCTGTGAGAGATCTTAAGAG+GGG | 0.713261 | 8_2:+57865350 | Msa1257270:CDS |
| AATTAAACAAGTCACCAACA+GGG | 0.716642 | 8_2:-57868311 | None:intergenic |
| GCAAGGGAAAGACTTCAAGG+TGG | 0.782847 | 8_2:+57867236 | Msa1257270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATACAAAAAACTAT+TGG | - | chr8_2:57865832-57865851 | None:intergenic | 10.0% |
| !! | AATAATTCTAACAAAAAAAT+TGG | - | chr8_2:57867057-57867076 | None:intergenic | 10.0% |
| !! | TTTATGATAAAATTTATTCA+GGG | - | chr8_2:57868599-57868618 | None:intergenic | 10.0% |
| !! | ATTTATGATAAAATTTATTC+AGG | - | chr8_2:57868600-57868619 | None:intergenic | 10.0% |
| !! | ATTTAATTCTTGAAATTGTA+AGG | + | chr8_2:57865844-57865863 | Msa1257270:intron | 15.0% |
| !!! | ATTTTTTAGTTTATCTCATT+AGG | + | chr8_2:57867354-57867373 | Msa1257270:intron | 15.0% |
| !! | AAACCAAAACAAAAATAAAA+GGG | - | chr8_2:57867625-57867644 | None:intergenic | 15.0% |
| !! | TAAACCAAAACAAAAATAAA+AGG | - | chr8_2:57867626-57867645 | None:intergenic | 15.0% |
| !! | CGAATTAGAAAATATTTATA+CGG | - | chr8_2:57868710-57868729 | None:intergenic | 15.0% |
| !! | ATCTTTATGACTAAATTAAC+CGG | - | chr8_2:57865955-57865974 | None:intergenic | 20.0% |
| !! | TGATGTATGATTTCAATTTA+GGG | + | chr8_2:57865994-57866013 | Msa1257270:intron | 20.0% |
| !!! | TAAGTTATTTCTATAGCAAA+AGG | - | chr8_2:57866907-57866926 | None:intergenic | 20.0% |
| !!! | TAATTTTAATTACCTTCCAT+TGG | + | chr8_2:57867018-57867037 | Msa1257270:intron | 20.0% |
| !! | TTCTAACAAAAAAATTGGAT+TGG | - | chr8_2:57867052-57867071 | None:intergenic | 20.0% |
| !! | AGCATAAAGTAAAAAACTAA+CGG | - | chr8_2:57867159-57867178 | None:intergenic | 20.0% |
| !!! | TATCCTCTATTTTATGTTAT+CGG | + | chr8_2:57867962-57867981 | Msa1257270:intron | 20.0% |
| !!! | GTAGATAATTTTCAATCAAA+TGG | + | chr8_2:57868372-57868391 | Msa1257270:CDS | 20.0% |
| !!! | GAAATTTTAACATAACCATT+AGG | + | chr8_2:57868542-57868561 | Msa1257270:intron | 20.0% |
| !! | AATTGAATATGTAAACCTAA+TGG | - | chr8_2:57868560-57868579 | None:intergenic | 20.0% |
| !! | AATAAGAGATACAATCAATA+AGG | - | chr8_2:57869387-57869406 | None:intergenic | 20.0% |
| !! | TAATTGTTGTAATGCAAATA+AGG | + | chr8_2:57869448-57869467 | Msa1257270:three_prime_UTR | 20.0% |
| ! | TTGTTAAATCTGATATTCCA+AGG | - | chr8_2:57865063-57865082 | Msa1257260:intron | 25.0% |
| !!! | AAACTTTGCATTTGTTTTCT+TGG | + | chr8_2:57865214-57865233 | Msa1257270:intron | 25.0% |
| !!! | AACTTTGCATTTGTTTTCTT+GGG | + | chr8_2:57865215-57865234 | Msa1257270:intron | 25.0% |
| ! | CCAAAACAATACAACAAAAA+TGG | - | chr8_2:57865305-57865324 | None:intergenic | 25.0% |
| !!! | CCATTTTTGTTGTATTGTTT+TGG | + | chr8_2:57865302-57865321 | Msa1257270:intron | 25.0% |
| !!! | TGTTCTGTTCATGTTTTTTT+AGG | + | chr8_2:57865522-57865541 | Msa1257270:intron | 25.0% |
| ! | AATTTGATCCATGAAATAGT+AGG | + | chr8_2:57865580-57865599 | Msa1257270:intron | 25.0% |
| ! | TTGTAATTTCATTAACAGCA+GGG | - | chr8_2:57865885-57865904 | None:intergenic | 25.0% |
| ! | TTTGTAATTTCATTAACAGC+AGG | - | chr8_2:57865886-57865905 | None:intergenic | 25.0% |
| ! | ATTGAAATCATACATCACAT+TGG | - | chr8_2:57865991-57866010 | None:intergenic | 25.0% |
| ! | GTGATGTATGATTTCAATTT+AGG | + | chr8_2:57865993-57866012 | Msa1257270:intron | 25.0% |
| !! | TTTAAGTCTTAGAGTATTCT+TGG | - | chr8_2:57866146-57866165 | None:intergenic | 25.0% |
| ! | AACAAATTGAGGACTATAAA+AGG | - | chr8_2:57866226-57866245 | None:intergenic | 25.0% |
| ! | GGAAGGTAATTAAAATTAAG+AGG | - | chr8_2:57867016-57867035 | None:intergenic | 25.0% |
| ! | TGTTAGAATTATTGTATGCA+TGG | + | chr8_2:57867064-57867083 | Msa1257270:intron | 25.0% |
| ! | ATCTGCAATATAAAAAAGCT+CGG | - | chr8_2:57867187-57867206 | None:intergenic | 25.0% |
| ! | CATTAGGTTAGATTATATCT+TGG | + | chr8_2:57867370-57867389 | Msa1257270:intron | 25.0% |
| ! | AATAACTCATCTTTATGTTG+TGG | + | chr8_2:57867435-57867454 | Msa1257270:intron | 25.0% |
| ! | TACAAAAAGCTAAATCAGAA+TGG | + | chr8_2:57867499-57867518 | Msa1257270:CDS | 25.0% |
| ! | CTACATTATAATGTTGTCAA+CGG | - | chr8_2:57867835-57867854 | None:intergenic | 25.0% |
| ! | AATGTTGTAACAGACTTATT+GGG | + | chr8_2:57868056-57868075 | Msa1257270:intron | 25.0% |
| !!! | ATTGATTCATTTTGTGTTCT+TGG | + | chr8_2:57868149-57868168 | Msa1257270:intron | 25.0% |
| ! | TTTACTCATGACAAGTAAAA+TGG | - | chr8_2:57868186-57868205 | None:intergenic | 25.0% |
| ! | ATGAAATCATCGTTATGAAA+TGG | + | chr8_2:57869086-57869105 | Msa1257270:CDS | 25.0% |
| ! | TTGTTAAACTTATGTCATTC+AGG | + | chr8_2:57869221-57869240 | Msa1257270:CDS | 25.0% |
| ! | TGTTAAACTTATGTCATTCA+GGG | + | chr8_2:57869222-57869241 | Msa1257270:CDS | 25.0% |
| !!! | AGGTTTTTCCTTATTTTTGT+AGG | + | chr8_2:57869468-57869487 | Msa1257270:three_prime_UTR | 25.0% |
| !!! | GGTTTTTCCTTATTTTTGTA+GGG | + | chr8_2:57869469-57869488 | Msa1257270:three_prime_UTR | 25.0% |
| !!! | GTTTTTCCTTATTTTTGTAG+GGG | + | chr8_2:57869470-57869489 | Msa1257270:three_prime_UTR | 25.0% |
| TTTCTTGGGTGATTAATCAA+AGG | + | chr8_2:57865229-57865248 | Msa1257270:intron | 30.0% | |
| TTCTTGGGTGATTAATCAAA+GGG | + | chr8_2:57865230-57865249 | Msa1257270:intron | 30.0% | |
| ! | CTAGTCATTAAAGCAGATTT+TGG | - | chr8_2:57865395-57865414 | None:intergenic | 30.0% |
| ACATGAACAGAACAAAAACT+TGG | - | chr8_2:57865516-57865535 | None:intergenic | 30.0% | |
| GATACATTCCTACTATTTCA+TGG | - | chr8_2:57865591-57865610 | None:intergenic | 30.0% | |
| CGACATTGCAAAATGTTAAT+CGG | + | chr8_2:57865651-57865670 | Msa1257270:intron | 30.0% | |
| ACTAAATTAACCGGTCTAAA+GGG | - | chr8_2:57865946-57865965 | None:intergenic | 30.0% | |
| AACTTAACATGCTTGACATT+TGG | - | chr8_2:57866615-57866634 | None:intergenic | 30.0% | |
| TTTATGAACTGGACTGATAT+GGG | - | chr8_2:57866665-57866684 | None:intergenic | 30.0% | |
| ATAAGTGCTCATCATGATAA+GGG | + | chr8_2:57866930-57866949 | Msa1257270:intron | 30.0% | |
| TTTCTCAAATTCACCAAACA+TGG | - | chr8_2:57867305-57867324 | None:intergenic | 30.0% | |
| ATCTTTATGTTGTGGTTATC+AGG | + | chr8_2:57867443-57867462 | Msa1257270:intron | 30.0% | |
| !! | GGTTTTTAACATTTAAGGCA+TGG | + | chr8_2:57867565-57867584 | Msa1257270:CDS | 30.0% |
| CCAAAACAAAAATAAAAGGG+AGG | - | chr8_2:57867622-57867641 | None:intergenic | 30.0% | |
| !!! | CCTCCCTTTTATTTTTGTTT+TGG | + | chr8_2:57867619-57867638 | Msa1257270:intron | 30.0% |
| GTAGCGAAATTTGAACAAAT+CGG | + | chr8_2:57867851-57867870 | Msa1257270:intron | 30.0% | |
| CAAGCAAAAGATTTCAAGAA+TGG | - | chr8_2:57868017-57868036 | None:intergenic | 30.0% | |
| CAATGTTGTAACAGACTTAT+TGG | + | chr8_2:57868055-57868074 | Msa1257270:intron | 30.0% | |
| ATGTTGTAACAGACTTATTG+GGG | + | chr8_2:57868057-57868076 | Msa1257270:intron | 30.0% | |
| TCAAAAACCAGATATCTTCT+CGG | + | chr8_2:57868250-57868269 | Msa1257270:intron | 30.0% | |
| AATTAAACAAGTCACCAACA+GGG | - | chr8_2:57868314-57868333 | None:intergenic | 30.0% | |
| TAATTAAACAAGTCACCAAC+AGG | - | chr8_2:57868315-57868334 | None:intergenic | 30.0% | |
| !! | ATGCATATTGCTTTTATGCT+AGG | + | chr8_2:57868478-57868497 | Msa1257270:CDS | 30.0% |
| TGTAGACTACAAACTATTAC+AGG | + | chr8_2:57868667-57868686 | Msa1257270:intron | 30.0% | |
| GTAGACTACAAACTATTACA+GGG | + | chr8_2:57868668-57868687 | Msa1257270:intron | 30.0% | |
| ! | GGGATGAAAATTTTGTCATT+TGG | - | chr8_2:57868890-57868909 | None:intergenic | 30.0% |
| ! | TGACAAAATTTTCATCCCTT+TGG | + | chr8_2:57868892-57868911 | Msa1257270:CDS | 30.0% |
| ! | TACATTATGAGCTTCTAAGA+AGG | - | chr8_2:57869260-57869279 | None:intergenic | 30.0% |
| TTTCATCTATGAAAACGAGA+AGG | + | chr8_2:57869308-57869327 | Msa1257270:CDS | 30.0% | |
| CTCTTATTGCAATGTAATAC+TGG | + | chr8_2:57869399-57869418 | Msa1257270:CDS | 30.0% | |
| TCATATCCCCTACAAAAATA+AGG | - | chr8_2:57869479-57869498 | None:intergenic | 30.0% | |
| TAGAAGATGGAACAAGAACA+TGG | + | chr8_2:57865004-57865023 | Msa1257270:exon | 35.0% | |
| AAGAACATGGAAGGTTTGAA+AGG | + | chr8_2:57865017-57865036 | Msa1257270:CDS | 35.0% | |
| GGTTTGAAAGGTTCTTAACA+TGG | + | chr8_2:57865029-57865048 | Msa1257270:CDS | 35.0% | |
| AAGAAGAAAAACCTGAACAG+AGG | - | chr8_2:57865480-57865499 | None:intergenic | 35.0% | |
| ACCTAATTAACAGGTGCTAA+TGG | + | chr8_2:57865800-57865819 | Msa1257270:intron | 35.0% | |
| TCCATTAGCACCTGTTAATT+AGG | - | chr8_2:57865804-57865823 | None:intergenic | 35.0% | |
| GACTAAATTAACCGGTCTAA+AGG | - | chr8_2:57865947-57865966 | None:intergenic | 35.0% | |
| TAGGAGGAGCTTTCAATTTA+GGG | + | chr8_2:57866063-57866082 | Msa1257270:intron | 35.0% | |
| !! | TCCTCAATTTGTTGACTTGA+TGG | + | chr8_2:57866233-57866252 | Msa1257270:intron | 35.0% |
| !! | CCTCAATTTGTTGACTTGAT+GGG | + | chr8_2:57866234-57866253 | Msa1257270:intron | 35.0% |
| TTAACATGCTTGACATTTGG+TGG | - | chr8_2:57866612-57866631 | None:intergenic | 35.0% | |
| GTTTATGAACTGGACTGATA+TGG | - | chr8_2:57866666-57866685 | None:intergenic | 35.0% | |
| ! | AGGCAATTTGGTTTATGAAC+TGG | - | chr8_2:57866676-57866695 | None:intergenic | 35.0% |
| TGTGCAATGTTAGAGACTAA+TGG | + | chr8_2:57866700-57866719 | Msa1257270:intron | 35.0% | |
| TTAGAGACTAATGGTCTGTT+TGG | + | chr8_2:57866709-57866728 | Msa1257270:intron | 35.0% | |
| ! | ATAAGTGTTGTGAGACTGTT+TGG | + | chr8_2:57866760-57866779 | Msa1257270:intron | 35.0% |
| ! | TAAGTGTTGTGAGACTGTTT+GGG | + | chr8_2:57866761-57866780 | Msa1257270:intron | 35.0% |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr8_2:57866851-57866870 | None:intergenic | 35.0% |
| CATAAGTGCTCATCATGATA+AGG | + | chr8_2:57866929-57866948 | Msa1257270:intron | 35.0% | |
| AATAAGTTGTGTGTCCAAAC+AGG | + | chr8_2:57866971-57866990 | Msa1257270:intron | 35.0% | |
| TTGGTTCAATAACCAATGGA+AGG | - | chr8_2:57867033-57867052 | None:intergenic | 35.0% | |
| !! | TGGATTGGTTCAATAACCAA+TGG | - | chr8_2:57867037-57867056 | None:intergenic | 35.0% |
| TGATGAAACCAAATCCTAAC+AGG | - | chr8_2:57867112-57867131 | None:intergenic | 35.0% | |
| !! | GTTTGCTTGTTATACGAAGT+TGG | + | chr8_2:57867214-57867233 | Msa1257270:CDS | 35.0% |
| TTGTTATACGAAGTTGGCAA+GGG | + | chr8_2:57867220-57867239 | Msa1257270:CDS | 35.0% | |
| TTTATGTTGTGGTTATCAGG+TGG | + | chr8_2:57867446-57867465 | Msa1257270:intron | 35.0% | |
| AAACATCAGTTCTTCCATCA+AGG | - | chr8_2:57867538-57867557 | None:intergenic | 35.0% | |
| AAGAACTGATGTTTAAGCCT+CGG | + | chr8_2:57867544-57867563 | Msa1257270:CDS | 35.0% | |
| ! | GCCTCGGTTTTTAACATTTA+AGG | + | chr8_2:57867560-57867579 | Msa1257270:CDS | 35.0% |
| GCCTTAAATGTTAAAAACCG+AGG | - | chr8_2:57867564-57867583 | None:intergenic | 35.0% | |
| ! | TAACATTTAAGGCATGGCTT+TGG | + | chr8_2:57867571-57867590 | Msa1257270:CDS | 35.0% |
| ! | AACATTTAAGGCATGGCTTT+GGG | + | chr8_2:57867572-57867591 | Msa1257270:CDS | 35.0% |
| ! | TGCAATGACGTTTTATATGG+TGG | + | chr8_2:57867794-57867813 | Msa1257270:intron | 35.0% |
| CATTATAATGTTGTCAACGG+CGG | - | chr8_2:57867832-57867851 | None:intergenic | 35.0% | |
| !! | TATGAAGCGTCGTCAAATAA+CGG | + | chr8_2:57867899-57867918 | Msa1257270:intron | 35.0% |
| TCGCCGATAACATAAAATAG+AGG | - | chr8_2:57867968-57867987 | None:intergenic | 35.0% | |
| ! | AAATCTTTTGCTTGCCTTTC+TGG | + | chr8_2:57868023-57868042 | Msa1257270:intron | 35.0% |
| TTGTTTAATTACGATGCACC+TGG | + | chr8_2:57868324-57868343 | Msa1257270:CDS | 35.0% | |
| CAATCAAATGGAGACAAGAA+TGG | + | chr8_2:57868384-57868403 | Msa1257270:CDS | 35.0% | |
| AAATGGAGACAAGAATGGAA+TGG | + | chr8_2:57868389-57868408 | Msa1257270:CDS | 35.0% | |
| GCTAGGACAAATTACAAGAA+AGG | + | chr8_2:57868495-57868514 | Msa1257270:CDS | 35.0% | |
| AAATTACAAGAAAGGCGATC+AGG | + | chr8_2:57868503-57868522 | Msa1257270:CDS | 35.0% | |
| ATCTTCATTCCACTGTTTAG+TGG | + | chr8_2:57868759-57868778 | Msa1257270:intron | 35.0% | |
| ! | ATTCCACTGTTTAGTGGATA+AGG | + | chr8_2:57868765-57868784 | Msa1257270:intron | 35.0% |
| AATAGAACCTGGTGAAAACA+AGG | - | chr8_2:57868803-57868822 | None:intergenic | 35.0% | |
| TTCCATAGCATAATAGAACC+TGG | - | chr8_2:57868814-57868833 | None:intergenic | 35.0% | |
| TTTGAGCTTCTTGAACACTA+CGG | + | chr8_2:57868845-57868864 | Msa1257270:CDS | 35.0% | |
| CTATGTACACTTCTACTTCA+TGG | + | chr8_2:57868921-57868940 | Msa1257270:CDS | 35.0% | |
| ! | AGACCTCCTTTTATTATGAG+GGG | - | chr8_2:57869023-57869042 | None:intergenic | 35.0% |
| ! | CAGACCTCCTTTTATTATGA+GGG | - | chr8_2:57869024-57869043 | None:intergenic | 35.0% |
| ! | ACAGACCTCCTTTTATTATG+AGG | - | chr8_2:57869025-57869044 | None:intergenic | 35.0% |
| CATAATAAAAGGAGGTCTGT+CGG | + | chr8_2:57869025-57869044 | Msa1257270:CDS | 35.0% | |
| GTATCGTCTTCAATAGATGT+TGG | - | chr8_2:57869148-57869167 | None:intergenic | 35.0% | |
| TATGAAAACGAGAAGGTCAA+TGG | + | chr8_2:57869315-57869334 | Msa1257270:CDS | 35.0% | |
| GAAAGAGCTAGGTTAGAAGA+TGG | + | chr8_2:57864991-57865010 | Msa1257270:exon | 40.0% | |
| AGATGGAACAAGAACATGGA+AGG | + | chr8_2:57865008-57865027 | Msa1257270:exon | 40.0% | |
| TTAACATGGACATCACACCT+TGG | + | chr8_2:57865043-57865062 | Msa1257270:CDS | 40.0% | |
| !! | AAGAGAGTGTTGAGAATGGT+CGG | - | chr8_2:57865095-57865114 | None:intergenic | 40.0% |
| !! | AGGAAAGAGAGTGTTGAGAA+TGG | - | chr8_2:57865099-57865118 | None:intergenic | 40.0% |
| TTTGGAGAATGTTGCAGTAG+AGG | + | chr8_2:57865320-57865339 | Msa1257270:intron | 40.0% | |
| AGAATGTTGCAGTAGAGGTT+TGG | + | chr8_2:57865325-57865344 | Msa1257270:intron | 40.0% | |
| GAATGTTGCAGTAGAGGTTT+GGG | + | chr8_2:57865326-57865345 | Msa1257270:intron | 40.0% | |
| TGCTGTGAGAGATCTTAAGA+GGG | + | chr8_2:57865349-57865368 | Msa1257270:CDS | 40.0% | |
| ! | AGCTATGTCTTGCTGTGAAT+AGG | + | chr8_2:57865441-57865460 | Msa1257270:CDS | 40.0% |
| ! | AATCGGATTTGTTCCTCTGT+TGG | + | chr8_2:57865668-57865687 | Msa1257270:intron | 40.0% |
| AACAGAGTCTGATCAAGAGA+CGG | + | chr8_2:57865777-57865796 | Msa1257270:intron | 40.0% | |
| AAGAGACGGACCTAATTAAC+AGG | + | chr8_2:57865791-57865810 | Msa1257270:intron | 40.0% | |
| ACATCACATTGGACTCATGA+AGG | - | chr8_2:57865980-57865999 | None:intergenic | 40.0% | |
| TTGTTCACGTGTTACAACAG+TGG | + | chr8_2:57866033-57866052 | Msa1257270:intron | 40.0% | |
| CTAAATTGAAAGCTCCTCCT+AGG | - | chr8_2:57866064-57866083 | None:intergenic | 40.0% | |
| CTAGGAGGAGCTTTCAATTT+AGG | + | chr8_2:57866062-57866081 | Msa1257270:intron | 40.0% | |
| TTGTTCACGTGTTACAACAG+TGG | + | chr8_2:57866033-57866052 | Msa1257270:intron | 40.0% | |
| TATAAAAGGAGACCCTTAGG+AGG | - | chr8_2:57866212-57866231 | None:intergenic | 40.0% | |
| GACTATAAAAGGAGACCCTT+AGG | - | chr8_2:57866215-57866234 | None:intergenic | 40.0% | |
| CCCATCAAGTCAACAAATTG+AGG | - | chr8_2:57866237-57866256 | None:intergenic | 40.0% | |
| GCAACAACTGTGTGTGAATT+AGG | + | chr8_2:57866280-57866299 | Msa1257270:intron | 40.0% | |
| CTGTGCAAATCAGCTTATTG+TGG | - | chr8_2:57866456-57866475 | None:intergenic | 40.0% | |
| ACAAATGTCTACGCCTTAAC+AGG | - | chr8_2:57866556-57866575 | None:intergenic | 40.0% | |
| !! | ACATTTGGTGGACTGTAAAC+TGG | - | chr8_2:57866600-57866619 | None:intergenic | 40.0% |
| ATTGCACACTTCAGGCAATT+TGG | - | chr8_2:57866688-57866707 | None:intergenic | 40.0% | |
| TCTCTAACATTGCACACTTC+AGG | - | chr8_2:57866696-57866715 | None:intergenic | 40.0% | |
| GACTAATGGTCTGTTTGGAT+TGG | + | chr8_2:57866714-57866733 | Msa1257270:intron | 40.0% | |
| TGTGTCCAAACAGGTCTAAA+TGG | + | chr8_2:57866980-57866999 | Msa1257270:intron | 40.0% | |
| CTTGACCATTTAGACCTGTT+TGG | - | chr8_2:57866988-57867007 | None:intergenic | 40.0% | |
| GAAACCAAATCCTAACAGGT+GGG | - | chr8_2:57867108-57867127 | None:intergenic | 40.0% | |
| TGAAACCAAATCCTAACAGG+TGG | - | chr8_2:57867109-57867128 | None:intergenic | 40.0% | |
| ! | CTTGTTATACGAAGTTGGCA+AGG | + | chr8_2:57867219-57867238 | Msa1257270:CDS | 40.0% |
| AGTCATAACTTTGCGGCAAA+TGG | - | chr8_2:57867276-57867295 | None:intergenic | 40.0% | |
| GCTAGCAAGTCATAACTTTG+CGG | - | chr8_2:57867283-57867302 | None:intergenic | 40.0% | |
| !! | TATGACTTGCTAGCCATGTT+TGG | + | chr8_2:57867289-57867308 | Msa1257270:CDS | 40.0% |
| TAACAGAGACTGAACTTGCA+GGG | - | chr8_2:57867332-57867351 | None:intergenic | 40.0% | |
| ! | AGAATGGCGAGGCAAATTTT+AGG | + | chr8_2:57867717-57867736 | Msa1257270:intron | 40.0% |
| ! | GGCTGCAATGACGTTTTATA+TGG | + | chr8_2:57867791-57867810 | Msa1257270:intron | 40.0% |
| TCATACTGAGTAGCGTAAAG+TGG | - | chr8_2:57867884-57867903 | None:intergenic | 40.0% | |
| !! | TCGTCAAATAACGGATAGAG+CGG | + | chr8_2:57867908-57867927 | Msa1257270:intron | 40.0% |
| TTATCGGCGATTGACATCAT+TGG | + | chr8_2:57867978-57867997 | Msa1257270:intron | 40.0% | |
| CATTGATCCAAGTACCAGAA+AGG | - | chr8_2:57868040-57868059 | None:intergenic | 40.0% | |
| TCGGACATTGCATATACCAT+GGG | + | chr8_2:57868269-57868288 | Msa1257270:CDS | 40.0% | |
| CATTCTCAGAGACTAACTGA+TGG | + | chr8_2:57868435-57868454 | Msa1257270:intron | 40.0% | |
| ATCAGGTAGTGCACAATTCT+TGG | + | chr8_2:57868520-57868539 | Msa1257270:intron | 40.0% | |
| ATGCCTTATCCACTAAACAG+TGG | - | chr8_2:57868771-57868790 | None:intergenic | 40.0% | |
| !!! | CAAGTTACCTTGTTTTCACC+AGG | + | chr8_2:57868793-57868812 | Msa1257270:intron | 40.0% |
| CACCAGGTTCTATTATGCTA+TGG | + | chr8_2:57868809-57868828 | Msa1257270:intron | 40.0% | |
| TGTACATAGCAGGTTCCAAA+GGG | - | chr8_2:57868910-57868929 | None:intergenic | 40.0% | |
| ! | GAAGTAGAAGTGTACATAGC+AGG | - | chr8_2:57868920-57868939 | None:intergenic | 40.0% |
| CACTTCTACTTCATGGTCTA+AGG | + | chr8_2:57868928-57868947 | Msa1257270:CDS | 40.0% | |
| TCACTCTATATCCATCCCAA+CGG | + | chr8_2:57868953-57868972 | Msa1257270:CDS | 40.0% | |
| CAACCCCTCATAATAAAAGG+AGG | + | chr8_2:57869017-57869036 | Msa1257270:CDS | 40.0% | |
| TACCTTACTCCTGAATGCAT+TGG | + | chr8_2:57869165-57869184 | Msa1257270:CDS | 40.0% | |
| !! | GTACGAGTTCTGAAAGAGCT+AGG | + | chr8_2:57864980-57864999 | Msa1257270:five_prime_UTR | 45.0% |
| CAACACTCTCTTTCCTCTCT+TGG | + | chr8_2:57865103-57865122 | Msa1257270:CDS | 45.0% | |
| GTTTCTACCTTTCCTCACTC+TGG | + | chr8_2:57865139-57865158 | Msa1257270:CDS | 45.0% | |
| GTGCTGTGAGAGATCTTAAG+AGG | + | chr8_2:57865348-57865367 | Msa1257270:CDS | 45.0% | |
| GCTGTGAGAGATCTTAAGAG+GGG | + | chr8_2:57865350-57865369 | Msa1257270:CDS | 45.0% | |
| GTTCCTCTGTTGGTATTCGT+AGG | + | chr8_2:57865678-57865697 | Msa1257270:intron | 45.0% | |
| GTTCCTACGAATACCAACAG+AGG | - | chr8_2:57865684-57865703 | None:intergenic | 45.0% | |
| TTCCTCTAGTCCCTTTAGAC+CGG | + | chr8_2:57865933-57865952 | Msa1257270:intron | 45.0% | |
| ATGCTCTGATTTCACGTGTC+AGG | - | chr8_2:57866372-57866391 | None:intergenic | 45.0% | |
| AGGTCGTGAGACACTTGAAT+GGG | + | chr8_2:57866429-57866448 | Msa1257270:intron | 45.0% | |
| TTAACAGGCTTGACGTTTGG+TGG | - | chr8_2:57866541-57866560 | None:intergenic | 45.0% | |
| ACCAAACGTCAAGCCTGTTA+AGG | + | chr8_2:57866540-57866559 | Msa1257270:intron | 45.0% | |
| TAAACTGGTATGGGTCGATC+AGG | - | chr8_2:57866585-57866604 | None:intergenic | 45.0% | |
| !! | GGTGGACTGTAAACTGGTAT+GGG | - | chr8_2:57866594-57866613 | None:intergenic | 45.0% |
| !! | TGGTGGACTGTAAACTGGTA+TGG | - | chr8_2:57866595-57866614 | None:intergenic | 45.0% |
| TTGGCAAGGGAAAGACTTCA+AGG | + | chr8_2:57867233-57867252 | Msa1257270:CDS | 45.0% | |
| CTAACAGAGACTGAACTTGC+AGG | - | chr8_2:57867333-57867352 | None:intergenic | 45.0% | |
| ATCAGGTGGATGAAGCTATG+TGG | + | chr8_2:57867460-57867479 | Msa1257270:intron | 45.0% | |
| TCAGGTGGATGAAGCTATGT+GGG | + | chr8_2:57867461-57867480 | Msa1257270:intron | 45.0% | |
| GAAAGAAGCTCATGCCTTGA+TGG | + | chr8_2:57867521-57867540 | Msa1257270:CDS | 45.0% | |
| AGCGTAGCAGTGTGGTTAAA+TGG | + | chr8_2:57867673-57867692 | Msa1257270:intron | 45.0% | |
| GTAGCAGTGTGGTTAAATGG+TGG | + | chr8_2:57867676-57867695 | Msa1257270:intron | 45.0% | |
| GTGTGGTTAAATGGTGGTCA+TGG | + | chr8_2:57867682-57867701 | Msa1257270:intron | 45.0% | |
| TTGTGAATGAATGCCCACCA+TGG | + | chr8_2:57867758-57867777 | Msa1257270:intron | 45.0% | |
| TAAAACGTCATTGCAGCCCA+TGG | - | chr8_2:57867789-57867808 | None:intergenic | 45.0% | |
| ATAATGTTGTCAACGGCGGA+AGG | - | chr8_2:57867828-57867847 | None:intergenic | 45.0% | |
| ! | TTGCTTGCCTTTCTGGTACT+TGG | + | chr8_2:57868030-57868049 | Msa1257270:intron | 45.0% |
| GCAATGTCCGAGAAGATATC+TGG | - | chr8_2:57868260-57868279 | None:intergenic | 45.0% | |
| CTCGGACATTGCATATACCA+TGG | + | chr8_2:57868268-57868287 | Msa1257270:CDS | 45.0% | |
| CATATACCATGGGATGAAGC+TGG | + | chr8_2:57868279-57868298 | Msa1257270:CDS | 45.0% | |
| AAACAACCAGCTTCATCCCA+TGG | - | chr8_2:57868288-57868307 | None:intergenic | 45.0% | |
| TAATTACGATGCACCTGGAG+AGG | + | chr8_2:57868329-57868348 | Msa1257270:CDS | 45.0% | |
| CTACGTCGTCAATACCAGAT+AGG | - | chr8_2:57868356-57868375 | None:intergenic | 45.0% | |
| TCTCAGAGACTAACTGATGG+TGG | + | chr8_2:57868438-57868457 | Msa1257270:intron | 45.0% | |
| CTCAGAGACTAACTGATGGT+GGG | + | chr8_2:57868439-57868458 | Msa1257270:intron | 45.0% | |
| GTGTACATAGCAGGTTCCAA+AGG | - | chr8_2:57868911-57868930 | None:intergenic | 45.0% | |
| ! | GCAAACGAAGGTTTTCCGTT+GGG | - | chr8_2:57868971-57868990 | None:intergenic | 45.0% |
| GGGCAACCCCTCATAATAAA+AGG | + | chr8_2:57869014-57869033 | Msa1257270:CDS | 45.0% | |
| CTCCAATGCATTCAGGAGTA+AGG | - | chr8_2:57869170-57869189 | None:intergenic | 45.0% | |
| GACTACACTCCAATGCATTC+AGG | - | chr8_2:57869177-57869196 | None:intergenic | 45.0% | |
| CGAGAAGGTCAATGGATAGA+TGG | + | chr8_2:57869323-57869342 | Msa1257270:CDS | 45.0% | |
| GATGGAAATTAGCCGTCTCA+TGG | + | chr8_2:57869341-57869360 | Msa1257270:CDS | 45.0% | |
| GCAGAGAGAATGACCAAGAG+AGG | - | chr8_2:57865119-57865138 | None:intergenic | 50.0% | |
| TCTACCTTTCCTCACTCTGG+CGG | + | chr8_2:57865142-57865161 | Msa1257270:CDS | 50.0% | |
| CTCTTCTCTCTCCTCTGTTC+AGG | + | chr8_2:57865466-57865485 | Msa1257270:CDS | 50.0% | |
| AACCGGTCTAAAGGGACTAG+AGG | - | chr8_2:57865938-57865957 | None:intergenic | 50.0% | |
| TTACAACAGTGGAGCTGCCT+AGG | + | chr8_2:57866044-57866063 | Msa1257270:intron | 50.0% | |
| TTACAACAGTGGAGCTGCCT+AGG | + | chr8_2:57866044-57866063 | Msa1257270:intron | 50.0% | |
| GTATTCTTGGAGCTCCTCCT+AGG | - | chr8_2:57866133-57866152 | None:intergenic | 50.0% | |
| ATGAGCGTAAGTGCCTCCTA+AGG | + | chr8_2:57866196-57866215 | Msa1257270:intron | 50.0% | |
| TGAGCGTAAGTGCCTCCTAA+GGG | + | chr8_2:57866197-57866216 | Msa1257270:intron | 50.0% | |
| CAGGTCGTGAGACACTTGAA+TGG | + | chr8_2:57866428-57866447 | Msa1257270:intron | 50.0% | |
| ! | CTGATTTGCACAGCCCAGTT+GGG | + | chr8_2:57866463-57866482 | Msa1257270:intron | 50.0% |
| ! | TGATTTGCACAGCCCAGTTG+GGG | + | chr8_2:57866464-57866483 | Msa1257270:intron | 50.0% |
| ! | TGCCATGGTTGGTGTGACTA+TGG | + | chr8_2:57866494-57866513 | Msa1257270:intron | 50.0% |
| GACCATAGTCACACCAACCA+TGG | - | chr8_2:57866499-57866518 | None:intergenic | 50.0% | |
| !! | ACGTTTGGTGGACTGTGGTT+TGG | - | chr8_2:57866529-57866548 | None:intergenic | 50.0% |
| GCCTTAACAGGCTTGACGTT+TGG | - | chr8_2:57866544-57866563 | None:intergenic | 50.0% | |
| ! | AACAGGTGGGCTCAATGCTT+TGG | - | chr8_2:57867095-57867114 | None:intergenic | 50.0% |
| !! | AAGCATTGAGCCCACCTGTT+AGG | + | chr8_2:57867095-57867114 | Msa1257270:intron | 50.0% |
| TGAGCCCACCTGTTAGGATT+TGG | + | chr8_2:57867101-57867120 | Msa1257270:intron | 50.0% | |
| GCAAGGGAAAGACTTCAAGG+TGG | + | chr8_2:57867236-57867255 | Msa1257270:CDS | 50.0% | |
| AACTTTGCGGCAAATGGACG+AGG | - | chr8_2:57867270-57867289 | None:intergenic | 50.0% | |
| GTTGCTATAGCGTAGCAGTG+TGG | + | chr8_2:57867665-57867684 | Msa1257270:intron | 50.0% | |
| GCTGGTTGTTTATGCCCTGT+TGG | + | chr8_2:57868297-57868316 | Msa1257270:CDS | 50.0% | |
| ATACCAGATAGGTCCTCTCC+AGG | - | chr8_2:57868345-57868364 | None:intergenic | 50.0% | |
| ! | ACGAAGGTTTTCCGTTGGGA+TGG | - | chr8_2:57868967-57868986 | None:intergenic | 50.0% |
| ! | CGCAAACGAAGGTTTTCCGT+TGG | - | chr8_2:57868972-57868991 | None:intergenic | 50.0% |
| TACTAGCTGCGTTACGACTG+TGG | + | chr8_2:57868993-57869012 | Msa1257270:CDS | 50.0% | |
| ACTAGCTGCGTTACGACTGT+GGG | + | chr8_2:57868994-57869013 | Msa1257270:CDS | 50.0% | |
| GTCGGACGTCTTGCATATTC+TGG | + | chr8_2:57869043-57869062 | Msa1257270:CDS | 50.0% | |
| GGAAATTAGCCGTCTCATGG+AGG | + | chr8_2:57869344-57869363 | Msa1257270:CDS | 50.0% | |
| ATACCTGAGCCTCCATGAGA+CGG | - | chr8_2:57869356-57869375 | None:intergenic | 50.0% | |
| CTACCTTTCCTCACTCTGGC+GGG | + | chr8_2:57865143-57865162 | Msa1257270:CDS | 55.0% | |
| TTACCCGCCAGAGTGAGGAA+AGG | - | chr8_2:57865149-57865168 | None:intergenic | 55.0% | |
| ! | TGACTTGATGGGCCTCTCGT+TGG | + | chr8_2:57866245-57866264 | Msa1257270:intron | 55.0% |
| ! | TTGATGGGCCTCTCGTTGGT+TGG | + | chr8_2:57866249-57866268 | Msa1257270:intron | 55.0% |
| ! | CTCTCGTTGGTTGGCTGGTA+CGG | + | chr8_2:57866258-57866277 | Msa1257270:intron | 55.0% |
| TCAGCTTCCCATGCCCTGTA+CGG | - | chr8_2:57866317-57866336 | None:intergenic | 55.0% | |
| !! | GCTGATTTGCACAGCCCAGT+TGG | + | chr8_2:57866462-57866481 | Msa1257270:intron | 55.0% |
| GATTTGCACAGCCCAGTTGG+GGG | + | chr8_2:57866465-57866484 | Msa1257270:intron | 55.0% | |
| !! | GCTTGACGTTTGGTGGACTG+TGG | - | chr8_2:57866534-57866553 | None:intergenic | 55.0% |
| TGCGGCAAATGGACGAGGTA+AGG | - | chr8_2:57867265-57867284 | None:intergenic | 55.0% | |
| !! | ATGGCTTTGGGCTGCTGCAA+CGG | + | chr8_2:57867584-57867603 | Msa1257270:CDS | 55.0% |
| TTTGCCTCGCCATTCTGCCA+TGG | - | chr8_2:57867713-57867732 | None:intergenic | 55.0% | |
| GCAGCTAGTAGCGCAAACGA+AGG | - | chr8_2:57868983-57869002 | None:intergenic | 55.0% | |
| ! | TCCTCACTCTGGCGGGTAAC+TGG | + | chr8_2:57865150-57865169 | Msa1257270:intron | 60.0% |
| CAACAGTGGAGCTGCCTAGG+AGG | + | chr8_2:57866047-57866066 | Msa1257270:intron | 60.0% | |
| CAACAGTGGAGCTGCCTAGG+AGG | + | chr8_2:57866047-57866066 | Msa1257270:intron | 60.0% | |
| CGTACCAGCCAACCAACGAG+AGG | - | chr8_2:57866260-57866279 | None:intergenic | 60.0% | |
| AGGTTGCAGCTCGTCCGTAC+AGG | + | chr8_2:57866300-57866319 | Msa1257270:intron | 60.0% | |
| GGTTGCAGCTCGTCCGTACA+GGG | + | chr8_2:57866301-57866320 | Msa1257270:intron | 60.0% | |
| AGCTCGTCCGTACAGGGCAT+GGG | + | chr8_2:57866307-57866326 | Msa1257270:intron | 60.0% | |
| !! | ATGGTGCCGCCATGGCAGAA+TGG | + | chr8_2:57867701-57867720 | Msa1257270:intron | 60.0% |
| TGCCCACCATGGAGTCTCCA+TGG | + | chr8_2:57867769-57867788 | Msa1257270:intron | 60.0% | |
| GCCCACCATGGAGTCTCCAT+GGG | + | chr8_2:57867770-57867789 | Msa1257270:intron | 60.0% | |
| GCCCATGGAGACTCCATGGT+GGG | - | chr8_2:57867774-57867793 | None:intergenic | 60.0% | |
| AGCCCATGGAGACTCCATGG+TGG | - | chr8_2:57867775-57867794 | None:intergenic | 60.0% | |
| TGCAGCCCATGGAGACTCCA+TGG | - | chr8_2:57867778-57867797 | None:intergenic | 60.0% | |
| GCACCTGGAGAGGACCTATC+TGG | + | chr8_2:57868339-57868358 | Msa1257270:CDS | 60.0% | |
| TAGCCGTCTCATGGAGGCTC+AGG | + | chr8_2:57869350-57869369 | Msa1257270:CDS | 60.0% | |
| GCCAGTTACCCGCCAGAGTG+AGG | - | chr8_2:57865154-57865173 | None:intergenic | 65.0% | |
| ! | TGGGCCTCTCGTTGGTTGGC+TGG | + | chr8_2:57866253-57866272 | Msa1257270:intron | 65.0% |
| CAGCTCGTCCGTACAGGGCA+TGG | + | chr8_2:57866306-57866325 | Msa1257270:intron | 65.0% | |
| GCTTACGTCACTGTGCCGCG+TGG | + | chr8_2:57866405-57866424 | Msa1257270:intron | 65.0% | |
| GTGTCTCACGACCTGCCACG+CGG | - | chr8_2:57866423-57866442 | None:intergenic | 65.0% | |
| !! | TGGTGGTCATGGTGCCGCCA+TGG | + | chr8_2:57867693-57867712 | Msa1257270:intron | 65.0% |
| GCCTCGCCATTCTGCCATGG+CGG | - | chr8_2:57867710-57867729 | None:intergenic | 65.0% | |
| ACGTCACTGTGCCGCGTGGC+AGG | + | chr8_2:57866409-57866428 | Msa1257270:intron | 70.0% | |
| TGGCAAGCGCGCCCCCAACT+GGG | - | chr8_2:57866479-57866498 | None:intergenic | 70.0% | |
| ATGGCAAGCGCGCCCCCAAC+TGG | - | chr8_2:57866480-57866499 | None:intergenic | 70.0% | |
| ! | AGTTGGGGGCGCGCTTGCCA+TGG | + | chr8_2:57866479-57866498 | Msa1257270:intron | 70.0% |
| GCCGCCATGGCAGAATGGCG+AGG | + | chr8_2:57867706-57867725 | Msa1257270:intron | 70.0% | |
| ! | GGGGGCGCGCTTGCCATGGT+TGG | + | chr8_2:57866483-57866502 | Msa1257270:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 57864960 | 57869504 | 57864960 | ID=Msa1257270;Name=Msa1257270 |
| chr8_2 | mRNA | 57864960 | 57869504 | 57864960 | ID=Msa1257270-mRNA-1;Parent=Msa1257270;Name=Msa1257270-mRNA-1;_AED=0.13;_eAED=0.13;_QI=50|0.83|0.71|1|0.83|0.71|7|66|477 |
| chr8_2 | exon | 57864960 | 57865164 | 57864960 | ID=Msa1257270-mRNA-1:exon:17802;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57865337 | 57865487 | 57865337 | ID=Msa1257270-mRNA-1:exon:17803;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57867205 | 57867336 | 57867205 | ID=Msa1257270-mRNA-1:exon:17804;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57867465 | 57867605 | 57867465 | ID=Msa1257270-mRNA-1:exon:17805;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57868261 | 57868410 | 57868261 | ID=Msa1257270-mRNA-1:exon:17806;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57868444 | 57868524 | 57868444 | ID=Msa1257270-mRNA-1:exon:17807;Parent=Msa1257270-mRNA-1 |
| chr8_2 | exon | 57868815 | 57869504 | 57868815 | ID=Msa1257270-mRNA-1:exon:17808;Parent=Msa1257270-mRNA-1 |
| chr8_2 | five_prime_UTR | 57864960 | 57865009 | 57864960 | ID=Msa1257270-mRNA-1:five_prime_utr;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57865010 | 57865164 | 57865010 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57865337 | 57865487 | 57865337 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57867205 | 57867336 | 57867205 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57867465 | 57867605 | 57867465 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57868261 | 57868410 | 57868261 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57868444 | 57868524 | 57868444 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | CDS | 57868815 | 57869438 | 57868815 | ID=Msa1257270-mRNA-1:cds;Parent=Msa1257270-mRNA-1 |
| chr8_2 | three_prime_UTR | 57869439 | 57869504 | 57869439 | ID=Msa1257270-mRNA-1:three_prime_utr;Parent=Msa1257270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
