Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257890 | XP_003608776.4 | 92.523 | 321 | 9 | 2 | 1 | 320 | 1 | 307 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257890 | sp|Q9SZ63|NUD14_ARATH | 70.775 | 284 | 68 | 2 | 34 | 317 | 34 | 302 | 1.61e-139 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257890 | G7JK61 | 92.523 | 321 | 9 | 2 | 1 | 320 | 1 | 307 | 0.0 | 590 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257890 | Msa1298970 | 0.828617 | 8.138812e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257890 | MtrunA17_Chr4g0056651 | 92.523 | 321 | 9 | 2 | 1 | 320 | 1 | 307 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1257890 | AT4G11980.1 | 70.775 | 284 | 68 | 2 | 34 | 317 | 34 | 302 | 1.64e-140 | 400 |
Find 88 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCCTCTTCTGATTTC+TGG | 0.076913 | 8_2:-58910545 | Msa1257890:intron |
| TCCTGTGGGAAGAATTATTT+TGG | 0.176950 | 8_2:-58907015 | Msa1257890:CDS |
| TTATGGTTTCTATAACTTAT+TGG | 0.177686 | 8_2:-58905797 | Msa1257890:three_prime_UTR |
| AGAAGGATTATTGCCTTCTT+TGG | 0.207755 | 8_2:-58905960 | Msa1257890:CDS |
| TATGGTTTCTATAACTTATT+GGG | 0.251061 | 8_2:-58905796 | Msa1257890:three_prime_UTR |
| GGTTGACCTCACTGCTTTCC+TGG | 0.256840 | 8_2:-58906727 | Msa1257890:CDS |
| TTATTATGTCTAGCTCCTTA+TGG | 0.271990 | 8_2:-58905814 | Msa1257890:three_prime_UTR |
| TTTCTTCTTAGGAATCAAAT+TGG | 0.277248 | 8_2:+58910677 | None:intergenic |
| AGGCAATAATCCTTCTTTCT+TGG | 0.280187 | 8_2:+58905967 | None:intergenic |
| TCTTTCGTTACTCGTGTTCA+TGG | 0.318672 | 8_2:+58910818 | None:intergenic |
| CTCTGCGTAGCATTACAATT+AGG | 0.325402 | 8_2:+58905934 | None:intergenic |
| TGAACATGGGGAGCTGATTA+AGG | 0.331333 | 8_2:-58906071 | Msa1257890:CDS |
| CATAATTTGCAAACAGAGAA+TGG | 0.350954 | 8_2:-58910384 | Msa1257890:CDS |
| TGTGGCTATGCTGATACTTT+TGG | 0.352770 | 8_2:-58908472 | Msa1257890:CDS |
| GAGATTATTGACAAAGAAAC+AGG | 0.356462 | 8_2:-58909413 | Msa1257890:CDS |
| GTAAATCATGATCAGGTTCC+AGG | 0.362368 | 8_2:-58908519 | Msa1257890:CDS |
| TATTGTAGGCACAGCAGTTC+GGG | 0.366455 | 8_2:-58906955 | Msa1257890:CDS |
| TACAATTAGGTTGCCAAAGA+AGG | 0.375860 | 8_2:+58905947 | None:intergenic |
| AACAGGGAGTAGACATGTTT+GGG | 0.387600 | 8_2:-58909466 | Msa1257890:intron |
| AAACAGGGAGTAGACATGTT+TGG | 0.395153 | 8_2:-58909467 | Msa1257890:intron |
| ATCAAATTGGGAGCGTGAAA+TGG | 0.400047 | 8_2:+58910690 | None:intergenic |
| TACTTGATGCGTGGACGATA+TGG | 0.403057 | 8_2:+58905751 | None:intergenic |
| AAACATGTTATGCAAATCAT+AGG | 0.412099 | 8_2:+58909379 | None:intergenic |
| AGCGAGAATGTGAACGGGTT+CGG | 0.418130 | 8_2:+58910575 | None:intergenic |
| GCTTTCCTGGACTCTTCAAC+TGG | 0.418805 | 8_2:-58906714 | Msa1257890:CDS |
| GTTCACATTCTCGCTGCTCC+TGG | 0.436111 | 8_2:-58910567 | Msa1257890:CDS |
| TGTTTCTTTGTCAATAATCT+CGG | 0.440352 | 8_2:+58909415 | None:intergenic |
| CCTGCGTTAGCAACTATAGA+AGG | 0.446863 | 8_2:+58910778 | None:intergenic |
| TTCTTCTTAGGAATCAAATT+GGG | 0.456348 | 8_2:+58910678 | None:intergenic |
| TAGTAAAGTAAATCATGATC+AGG | 0.463951 | 8_2:-58908526 | Msa1257890:CDS |
| GAGACTGGCCTTCGTGAACA+TGG | 0.464259 | 8_2:-58906085 | Msa1257890:CDS |
| AACAGCAGATTGCAAGGTTC+TGG | 0.465296 | 8_2:-58906014 | Msa1257890:CDS |
| GTATGCTGTTCTTACTGATC+AGG | 0.474563 | 8_2:-58908433 | Msa1257890:intron |
| ATAATTTGCAAACAGAGAAT+GGG | 0.475311 | 8_2:-58910383 | Msa1257890:CDS |
| TCTGAGAGTCATTGTACCAT+TGG | 0.480991 | 8_2:+58910353 | None:intergenic |
| AGCTCAATATATACAGGAGA+GGG | 0.481521 | 8_2:+58906678 | None:intergenic |
| GGCTGTTGCACTGTTAGAAA+TGG | 0.482756 | 8_2:-58905990 | Msa1257890:CDS |
| GATGACAAGGGTGATATTGT+AGG | 0.485313 | 8_2:-58906969 | Msa1257890:CDS |
| GACATGTTTGGGAAGCGCAT+TGG | 0.492141 | 8_2:-58909455 | Msa1257890:CDS |
| TGCTTCCAGTTGAAGAGTCC+AGG | 0.494978 | 8_2:+58906709 | None:intergenic |
| TGGTACCATACAAGAACCTT+TGG | 0.499032 | 8_2:-58906042 | Msa1257890:CDS |
| CAACCACTGCTTGAATAAAG+AGG | 0.500121 | 8_2:+58910407 | None:intergenic |
| ATATTGTAGGCACAGCAGTT+CGG | 0.501769 | 8_2:-58906956 | Msa1257890:CDS |
| TTAAAATAGTATAGAACATG+TGG | 0.507932 | 8_2:-58905675 | Msa1257890:three_prime_UTR |
| AATAAGTTATAGAAACCATA+AGG | 0.508019 | 8_2:+58905799 | None:intergenic |
| CCTCTTGCAAATACAATACC+TGG | 0.509588 | 8_2:+58908501 | None:intergenic |
| ATTGGATAGAGACTTTGCTC+TGG | 0.517325 | 8_2:-58905870 | Msa1257890:three_prime_UTR |
| AAATCAGAAGAGGAGACACC+AGG | 0.535597 | 8_2:+58910549 | None:intergenic |
| GTGCGCCAAAGGTTCTTGTA+TGG | 0.536766 | 8_2:+58906037 | None:intergenic |
| CCTTCTATAGTTGCTAACGC+AGG | 0.539053 | 8_2:-58910778 | Msa1257890:five_prime_UTR |
| TTAGAAATGGCCAAGAAAGA+AGG | 0.541378 | 8_2:-58905977 | Msa1257890:CDS |
| GGAATTGCCTGCTGGAATGT+TGG | 0.549721 | 8_2:-58906994 | Msa1257890:CDS |
| GAAGGCCAGTCTCTTTACCT+TGG | 0.550388 | 8_2:+58906095 | None:intergenic |
| ATTCCTCTTTATTCAAGCAG+TGG | 0.554918 | 8_2:-58910410 | Msa1257890:CDS |
| CCAGGTATTGTATTTGCAAG+AGG | 0.555102 | 8_2:-58908501 | Msa1257890:CDS |
| CTTCTATAGTTGCTAACGCA+GGG | 0.556159 | 8_2:-58910777 | Msa1257890:five_prime_UTR |
| TGACAAAGAAACAGGGAACA+AGG | 0.558788 | 8_2:-58909405 | Msa1257890:CDS |
| TCCAAAATAATTCTTCCCAC+AGG | 0.563140 | 8_2:+58907014 | None:intergenic |
| TGGCAGGTTGAAGAAGAGAC+AGG | 0.570033 | 8_2:-58906774 | Msa1257890:intron |
| AGACTGGCCTTCGTGAACAT+GGG | 0.570468 | 8_2:-58906084 | Msa1257890:CDS |
| AGTATCAGCATAGCCACAGC+TGG | 0.570896 | 8_2:+58908477 | None:intergenic |
| TCATCGTCCAACATTCCAGC+AGG | 0.573349 | 8_2:+58906987 | None:intergenic |
| GCGCACAACAGCAGATTGCA+AGG | 0.575266 | 8_2:-58906020 | Msa1257890:CDS |
| CAAGCTAAATGTAGAAGACA+TGG | 0.576281 | 8_2:-58906748 | Msa1257890:CDS |
| GGAGCAGCGAGAATGTGAAC+GGG | 0.577923 | 8_2:+58910570 | None:intergenic |
| CATCTCCAAGGTAAAGAGAC+TGG | 0.580100 | 8_2:-58906100 | Msa1257890:CDS |
| AGGAGCAGCGAGAATGTGAA+CGG | 0.585766 | 8_2:+58910569 | None:intergenic |
| AGCAGATTGCAAGGTTCTGG+TGG | 0.586787 | 8_2:-58906011 | Msa1257890:CDS |
| GTGAGTCAATGACGGTGACT+CGG | 0.589156 | 8_2:+58910623 | None:intergenic |
| AATCTGCTGTTGTGCGCCAA+AGG | 0.597228 | 8_2:+58906026 | None:intergenic |
| TTATAAGGCAAGAGTTCCTG+TGG | 0.602408 | 8_2:-58907030 | Msa1257890:intron |
| TGGAATGTTGGACGATGACA+AGG | 0.606260 | 8_2:-58906982 | Msa1257890:CDS |
| GACTGGCCTTCGTGAACATG+GGG | 0.615008 | 8_2:-58906083 | Msa1257890:CDS |
| GAGATCATCACACATCTCCA+AGG | 0.618343 | 8_2:-58906112 | Msa1257890:CDS |
| GTGATATAGTGAGTCAATGA+CGG | 0.622297 | 8_2:+58910615 | None:intergenic |
| GAATGACCAGAAATCAGAAG+AGG | 0.626066 | 8_2:+58910539 | None:intergenic |
| AAGCTCAATATATACAGGAG+AGG | 0.630817 | 8_2:+58906677 | None:intergenic |
| TGTAGGCACAGCAGTTCGGG+AGG | 0.655418 | 8_2:-58906952 | Msa1257890:intron |
| TATAAGGCAAGAGTTCCTGT+GGG | 0.664649 | 8_2:-58907029 | Msa1257890:intron |
| GCTCAATATATACAGGAGAG+GGG | 0.669054 | 8_2:+58906679 | None:intergenic |
| ATTTGCAAGAGGACCAGCTG+TGG | 0.669747 | 8_2:-58908490 | Msa1257890:CDS |
| ACGGGTTCGGATTGTTTACG+CGG | 0.696511 | 8_2:+58910588 | None:intergenic |
| TCAGCTCCCCATGTTCACGA+AGG | 0.700716 | 8_2:+58906077 | None:intergenic |
| AAGAGTCCAGGAAAGCAGTG+AGG | 0.702074 | 8_2:+58906721 | None:intergenic |
| AGTCAATGACGGTGACTCGG+TGG | 0.709620 | 8_2:+58910626 | None:intergenic |
| GGAGCTGATTAAGGTGCGTG+TGG | 0.720710 | 8_2:-58906062 | Msa1257890:CDS |
| AGATTATTGACAAAGAAACA+GGG | 0.740365 | 8_2:-58909412 | Msa1257890:CDS |
| GGAATGTTGGACGATGACAA+GGG | 0.808727 | 8_2:-58906981 | Msa1257890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATGAATTGAAAAAT+AGG | + | chr8_2:58906038-58906057 | None:intergenic | 10.0% |
| !! | AAAAACAGTTATTTAAATAA+AGG | - | chr8_2:58907471-58907490 | Msa1257890:intron | 10.0% |
| !! | TATATATATAAAAACAAACT+TGG | + | chr8_2:58908404-58908423 | None:intergenic | 10.0% |
| !! | TTATAAAGAAAATATTGTTA+TGG | + | chr8_2:58909443-58909462 | None:intergenic | 10.0% |
| !! | TTAAATTTCAATAAATTCAT+GGG | + | chr8_2:58910192-58910211 | None:intergenic | 10.0% |
| !! | ATATCATTAGCAAAAAAAAA+AGG | - | chr8_2:58906677-58906696 | Msa1257890:intron | 15.0% |
| !! | ATAAGTTATTAAGAATGATT+TGG | - | chr8_2:58906773-58906792 | Msa1257890:intron | 15.0% |
| !!! | AATTTTGTTATTATGATTGT+AGG | + | chr8_2:58907045-58907064 | None:intergenic | 15.0% |
| !! | ACAATCATAATAACAAAATT+TGG | - | chr8_2:58907045-58907064 | Msa1257890:intron | 15.0% |
| !!! | ATAACTGTTTTTTTTTAGAT+TGG | + | chr8_2:58907463-58907482 | None:intergenic | 15.0% |
| !! | TATTGTATGTATATTCATTT+GGG | + | chr8_2:58908842-58908861 | None:intergenic | 15.0% |
| !! | ATAAGGTAAATAAATATGTT+TGG | + | chr8_2:58909707-58909726 | None:intergenic | 15.0% |
| !! | CTTAAATTTCAATAAATTCA+TGG | + | chr8_2:58910193-58910212 | None:intergenic | 15.0% |
| !! | AATCTATTGCAAATTATAGA+GGG | - | chr8_2:58906330-58906349 | Msa1257890:intron | 20.0% |
| !! | ATTAGCAAAAAAAAAAGGTA+TGG | - | chr8_2:58906682-58906701 | Msa1257890:intron | 20.0% |
| !! | TGATTCATGATACAATATTA+TGG | - | chr8_2:58906820-58906839 | Msa1257890:intron | 20.0% |
| !! | TTATTTGATGTTGTTAAGAT+TGG | - | chr8_2:58906873-58906892 | Msa1257890:intron | 20.0% |
| !! | ATCATAATAACAAAATTTGG+CGG | - | chr8_2:58907048-58907067 | Msa1257890:intron | 20.0% |
| !!! | GATTTTTTTTGGTATAAACA+GGG | - | chr8_2:58907070-58907089 | Msa1257890:intron | 20.0% |
| !!! | ATTTAAATAAAGGTGTTGAT+TGG | - | chr8_2:58907481-58907500 | Msa1257890:intron | 20.0% |
| !!! | TATGAATCAAATTTTTCTTG+AGG | + | chr8_2:58907624-58907643 | None:intergenic | 20.0% |
| !!! | TGTATATGATCTATATGTTT+TGG | + | chr8_2:58908381-58908400 | None:intergenic | 20.0% |
| !! | AAATGATCTCTATAATGAAT+TGG | - | chr8_2:58908579-58908598 | Msa1257890:intron | 20.0% |
| !! | GTATTGTATGTATATTCATT+TGG | + | chr8_2:58908843-58908862 | None:intergenic | 20.0% |
| !! | GAATCTATAATATTGTTAAC+AGG | - | chr8_2:58909152-58909171 | Msa1257890:intron | 20.0% |
| !! | CTGATATACAATATATCTAA+AGG | - | chr8_2:58909374-58909393 | Msa1257890:intron | 20.0% |
| !! | AAAAACAAACCAATTATATC+TGG | - | chr8_2:58909463-58909482 | Msa1257890:CDS | 20.0% |
| !! | AATGAAATTCCAGATATAAT+TGG | + | chr8_2:58909475-58909494 | None:intergenic | 20.0% |
| !!! | TTATGCTGGATATTTTTATA+AGG | - | chr8_2:58909507-58909526 | Msa1257890:intron | 20.0% |
| !!! | TGAATGTTGTTATTTCAATA+AGG | + | chr8_2:58909724-58909743 | None:intergenic | 20.0% |
| !!! | TTCTTATTCTCTTTCTTTTT+CGG | - | chr8_2:58910354-58910373 | Msa1257890:CDS | 20.0% |
| !! | AATAAGTTATAGAAACCATA+AGG | + | chr8_2:58910756-58910775 | None:intergenic | 20.0% |
| !! | TTATGGTTTCTATAACTTAT+TGG | - | chr8_2:58910755-58910774 | Msa1257890:exon | 20.0% |
| !! | TATGGTTTCTATAACTTATT+GGG | - | chr8_2:58910756-58910775 | Msa1257890:exon | 20.0% |
| !! | TTAAAATAGTATAGAACATG+TGG | - | chr8_2:58910877-58910896 | Msa1257890:five_prime_UTR | 20.0% |
| ! | TTGATGTAACCAAAAATACA+TGG | - | chr8_2:58905684-58905703 | Msa1257890:three_prime_UTR | 25.0% |
| ! | TGATGTAACCAAAAATACAT+GGG | - | chr8_2:58905685-58905704 | Msa1257890:three_prime_UTR | 25.0% |
| ! | TTCTTCTTAGGAATCAAATT+GGG | + | chr8_2:58905877-58905896 | None:intergenic | 25.0% |
| ! | TTTCTTCTTAGGAATCAAAT+TGG | + | chr8_2:58905878-58905897 | None:intergenic | 25.0% |
| !! | ATAATTTGCAAACAGAGAAT+GGG | - | chr8_2:58906169-58906188 | Msa1257890:CDS | 25.0% |
| ! | TTTAATTCAGGTGATTCATT+AGG | - | chr8_2:58906227-58906246 | Msa1257890:intron | 25.0% |
| ! | GAATCTATTGCAAATTATAG+AGG | - | chr8_2:58906329-58906348 | Msa1257890:intron | 25.0% |
| ! | ATCTATTGCAAATTATAGAG+GGG | - | chr8_2:58906331-58906350 | Msa1257890:intron | 25.0% |
| ! | TATCACAATGTAAGTATCTT+GGG | - | chr8_2:58906375-58906394 | Msa1257890:intron | 25.0% |
| !!! | AGTGCTTCTAGTTTAATTTA+TGG | - | chr8_2:58906479-58906498 | Msa1257890:intron | 25.0% |
| ! | TATGGTGAAAAAATATCACT+CGG | - | chr8_2:58906497-58906516 | Msa1257890:intron | 25.0% |
| !! | TAATAACTTATAGTTTTCCC+TGG | + | chr8_2:58906764-58906783 | None:intergenic | 25.0% |
| !! | AAGAATGATTTGGAACTAAA+TGG | - | chr8_2:58906783-58906802 | Msa1257890:intron | 25.0% |
| !!! | AAAATTTGGCGGATTTTTTT+TGG | - | chr8_2:58907059-58907078 | Msa1257890:intron | 25.0% |
| !!! | GGATTTTTTTTGGTATAAAC+AGG | - | chr8_2:58907069-58907088 | Msa1257890:intron | 25.0% |
| ! | TGTTTCTTTGTCAATAATCT+CGG | + | chr8_2:58907140-58907159 | None:intergenic | 25.0% |
| ! | AGATTATTGACAAAGAAACA+GGG | - | chr8_2:58907140-58907159 | Msa1257890:intron | 25.0% |
| ! | AAACATGTTATGCAAATCAT+AGG | + | chr8_2:58907176-58907195 | None:intergenic | 25.0% |
| !!! | TTTTCATTATTAGCCTATTG+AGG | - | chr8_2:58907193-58907212 | Msa1257890:intron | 25.0% |
| ! | AGTCATTGTTCAAATAATGT+TGG | + | chr8_2:58907289-58907308 | None:intergenic | 25.0% |
| ! | CATTATTTGAACAATGACTA+TGG | - | chr8_2:58907290-58907309 | Msa1257890:intron | 25.0% |
| ! | TTTGAATAAAAGTTTCCCAA+AGG | - | chr8_2:58907325-58907344 | Msa1257890:intron | 25.0% |
| ! | AATAACCAAATAACTAAGCA+GGG | + | chr8_2:58907574-58907593 | None:intergenic | 25.0% |
| ! | CATATTTATCTTACCTTTCA+AGG | - | chr8_2:58907640-58907659 | Msa1257890:intron | 25.0% |
| ! | AAGTCGATGCATAAATATTT+AGG | - | chr8_2:58907675-58907694 | Msa1257890:intron | 25.0% |
| !! | ATTTTAAATGTCAAACGAAG+AGG | - | chr8_2:58907752-58907771 | Msa1257890:intron | 25.0% |
| !! | TTTTAAATGTCAAACGAAGA+GGG | - | chr8_2:58907753-58907772 | Msa1257890:intron | 25.0% |
| ! | AAAAGAAAGAAATCAGCATT+AGG | + | chr8_2:58908004-58908023 | None:intergenic | 25.0% |
| ! | TAGTAAAGTAAATCATGATC+AGG | - | chr8_2:58908026-58908045 | Msa1257890:intron | 25.0% |
| !! | TTTGAGATAATCAAGTTGTA+GGG | + | chr8_2:58908661-58908680 | None:intergenic | 25.0% |
| !! | ATTTGAGATAATCAAGTTGT+AGG | + | chr8_2:58908662-58908681 | None:intergenic | 25.0% |
| ! | CTAATATAGAAACATGACAA+CGG | + | chr8_2:58908759-58908778 | None:intergenic | 25.0% |
| !!! | CATTTTGTTTATTGCTTTTC+CGG | - | chr8_2:58908804-58908823 | Msa1257890:intron | 25.0% |
| ! | AATATACATACAATACTCAG+AGG | - | chr8_2:58908847-58908866 | Msa1257890:intron | 25.0% |
| ! | AAAAAAAAAACGCCATGAAA+AGG | + | chr8_2:58908958-58908977 | None:intergenic | 25.0% |
| !! | TTTAAGGTACAAATTACACT+AGG | - | chr8_2:58908989-58909008 | Msa1257890:intron | 25.0% |
| !!! | GATAAGCACCATTTTTTTAT+TGG | + | chr8_2:58909015-58909034 | None:intergenic | 25.0% |
| ! | ATTCTGATGCAAAATTTCTT+TGG | + | chr8_2:58909136-58909155 | None:intergenic | 25.0% |
| ! | TCAACATAATATCTAATGAG+AGG | + | chr8_2:58909306-58909325 | None:intergenic | 25.0% |
| ! | AAAATATCCAGCATAAGAAT+AGG | + | chr8_2:58909503-58909522 | None:intergenic | 25.0% |
| ! | TATTTCATTTGCATCACTAA+TGG | - | chr8_2:58909666-58909685 | Msa1257890:intron | 25.0% |
| ! | GTTTAGTATCATGATATTGT+TGG | - | chr8_2:58910052-58910071 | Msa1257890:intron | 25.0% |
| ! | TATACTTTAGCTGTCAAAAT+TGG | - | chr8_2:58910319-58910338 | Msa1257890:intron | 25.0% |
| !!! | TTTCTTTTTCGGTGTTATTA+GGG | - | chr8_2:58910365-58910384 | Msa1257890:CDS | 25.0% |
| ! | AAAAACAGAAGAGAGATTAT+TGG | - | chr8_2:58910664-58910683 | Msa1257890:CDS | 25.0% |
| !!! | AAAGCGTTGTTTTTCTTCTT+AGG | + | chr8_2:58905889-58905908 | None:intergenic | 30.0% |
| ! | CATAATTTGCAAACAGAGAA+TGG | - | chr8_2:58906168-58906187 | Msa1257890:CDS | 30.0% |
| !!! | TCTCAGACAAGTTTTAATTC+AGG | - | chr8_2:58906215-58906234 | Msa1257890:intron | 30.0% |
| TCTATTGCAAATTATAGAGG+GGG | - | chr8_2:58906332-58906351 | Msa1257890:intron | 30.0% | |
| GTATCACAATGTAAGTATCT+TGG | - | chr8_2:58906374-58906393 | Msa1257890:intron | 30.0% | |
| GTCTATCATACAAAATGATG+AGG | - | chr8_2:58906397-58906416 | Msa1257890:intron | 30.0% | |
| TGTATCCTAAACTATAAAGC+CGG | - | chr8_2:58906534-58906553 | Msa1257890:intron | 30.0% | |
| TACTATTGTAGAAAGGATGT+AGG | - | chr8_2:58906710-58906729 | Msa1257890:CDS | 30.0% | |
| ACTATTGTAGAAAGGATGTA+GGG | - | chr8_2:58906711-58906730 | Msa1257890:CDS | 30.0% | |
| ! | TAACCATTAGTTTGAGGTAA+AGG | - | chr8_2:58906734-58906753 | Msa1257890:CDS | 30.0% |
| TTTCCTTTACCTCAAACTAA+TGG | + | chr8_2:58906740-58906759 | None:intergenic | 30.0% | |
| GAGATTATTGACAAAGAAAC+AGG | - | chr8_2:58907139-58907158 | Msa1257890:intron | 30.0% | |
| AGACATGAAAATTCCTCAAT+AGG | + | chr8_2:58907209-58907228 | None:intergenic | 30.0% | |
| TTCAAATAATGTTGGAGATC+CGG | + | chr8_2:58907281-58907300 | None:intergenic | 30.0% | |
| !! | AGGTGAAAATTTTAGTAGCA+GGG | + | chr8_2:58907411-58907430 | None:intergenic | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | + | chr8_2:58907436-58907455 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | + | chr8_2:58907437-58907456 | None:intergenic | 30.0% |
| TTTAGATTGGCAAATGTTAG+TGG | + | chr8_2:58907450-58907469 | None:intergenic | 30.0% | |
| !! | TAAATAAAGGTGTTGATTGG+TGG | - | chr8_2:58907484-58907503 | Msa1257890:intron | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | + | chr8_2:58907436-58907455 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | + | chr8_2:58907437-58907456 | None:intergenic | 30.0% |
| TATAACCCTGCTTAGTTATT+TGG | - | chr8_2:58907566-58907585 | Msa1257890:intron | 30.0% | |
| CAATAACCAAATAACTAAGC+AGG | + | chr8_2:58907575-58907594 | None:intergenic | 30.0% | |
| TTCCTGATTGTACTAAACAT+GGG | + | chr8_2:58907704-58907723 | None:intergenic | 30.0% | |
| ATTCCTGATTGTACTAAACA+TGG | + | chr8_2:58907705-58907724 | None:intergenic | 30.0% | |
| CTAGACAGAAAAATATGTGT+GGG | + | chr8_2:58907829-58907848 | None:intergenic | 30.0% | |
| TCTAGACAGAAAAATATGTG+TGG | + | chr8_2:58907830-58907849 | None:intergenic | 30.0% | |
| AATTTGCAAACATCTGTCAT+AGG | - | chr8_2:58907889-58907908 | Msa1257890:intron | 30.0% | |
| !!! | CTATATGTTTTGGTTTGACA+GGG | + | chr8_2:58908371-58908390 | None:intergenic | 30.0% |
| !!! | TCTATATGTTTTGGTTTGAC+AGG | + | chr8_2:58908372-58908391 | None:intergenic | 30.0% |
| TCATCTAAAAACATCATCAC+TGG | + | chr8_2:58908560-58908579 | None:intergenic | 30.0% | |
| ! | CGTTGTCATGTTTCTATATT+AGG | - | chr8_2:58908757-58908776 | Msa1257890:intron | 30.0% |
| ! | TTAGGATTTTGTTCTTGACT+TGG | - | chr8_2:58908775-58908794 | Msa1257890:intron | 30.0% |
| ACACTAGGCCAATAAAAAAA+TGG | - | chr8_2:58909004-58909023 | Msa1257890:intron | 30.0% | |
| TGCTTATCACACTACAATAA+AGG | - | chr8_2:58909027-58909046 | Msa1257890:intron | 30.0% | |
| AATAAAGGAGACATAAGAGA+GGG | - | chr8_2:58909042-58909061 | Msa1257890:intron | 30.0% | |
| ATGCAAAATTTCTTTGGATC+AGG | + | chr8_2:58909130-58909149 | None:intergenic | 30.0% | |
| ATCAAGCGATAAAATTTCAC+CGG | - | chr8_2:58909241-58909260 | Msa1257890:intron | 30.0% | |
| GCAAAAAGCTCAATATATAC+AGG | + | chr8_2:58909883-58909902 | None:intergenic | 30.0% | |
| GATTTATATGCAATTCTGCA+TGG | + | chr8_2:58910161-58910180 | None:intergenic | 30.0% | |
| !!! | CTTTCTTTTTCGGTGTTATT+AGG | - | chr8_2:58910364-58910383 | Msa1257890:CDS | 30.0% |
| ! | TTATTATGTCTAGCTCCTTA+TGG | - | chr8_2:58910738-58910757 | Msa1257890:CDS | 30.0% |
| ! | TACTCACACCCATGTATTTT+TGG | + | chr8_2:58905696-58905715 | None:intergenic | 35.0% |
| GTGATATAGTGAGTCAATGA+CGG | + | chr8_2:58905940-58905959 | None:intergenic | 35.0% | |
| ATTCCTCTTTATTCAAGCAG+TGG | - | chr8_2:58906142-58906161 | Msa1257890:CDS | 35.0% | |
| GTTGTATGGAACTGAATATC+AGG | - | chr8_2:58906561-58906580 | Msa1257890:intron | 35.0% | |
| GGATAGCTACTATTGTAGAA+AGG | - | chr8_2:58906703-58906722 | Msa1257890:CDS | 35.0% | |
| ! | TTTGAGGTAAAGGAAAACCA+GGG | - | chr8_2:58906744-58906763 | Msa1257890:CDS | 35.0% |
| ATAAGTTTCACTCGACAGTA+AGG | + | chr8_2:58906857-58906876 | None:intergenic | 35.0% | |
| ACTATCAACAACTGTTGATG+TGG | - | chr8_2:58906965-58906984 | Msa1257890:CDS | 35.0% | |
| GATGTGGCTATTCAATCAAA+AGG | - | chr8_2:58906981-58907000 | Msa1257890:CDS | 35.0% | |
| GGACATTCAATTGATATTCC+TGG | - | chr8_2:58907002-58907021 | Msa1257890:CDS | 35.0% | |
| ATAAAAGTTTCCCAAAGGAG+TGG | - | chr8_2:58907330-58907349 | Msa1257890:intron | 35.0% | |
| GAACCTCCTAGATATTACTT+TGG | + | chr8_2:58907378-58907397 | None:intergenic | 35.0% | |
| !! | GAGGTGAAAATTTTAGTAGC+AGG | + | chr8_2:58907412-58907431 | None:intergenic | 35.0% |
| CAGGGTTATACTAATGTTAG+TGG | + | chr8_2:58907556-58907575 | None:intergenic | 35.0% | |
| CTGTGCTACAATATATAGAG+TGG | - | chr8_2:58907595-58907614 | Msa1257890:intron | 35.0% | |
| !! | TTATGCATCGACTTATATCC+AGG | + | chr8_2:58907669-58907688 | None:intergenic | 35.0% |
| TTCCCATGTTTAGTACAATC+AGG | - | chr8_2:58907699-58907718 | Msa1257890:intron | 35.0% | |
| TTAGTACAATCAGGAATGTC+TGG | - | chr8_2:58907708-58907727 | Msa1257890:intron | 35.0% | |
| !!! | CTGATACTTTTGGAATCAGA+GGG | - | chr8_2:58908090-58908109 | Msa1257890:intron | 35.0% |
| CTTACTGATCAGGTATATGT+TGG | - | chr8_2:58908129-58908148 | Msa1257890:intron | 35.0% | |
| ATAATGTACGTATGCTGGTA+GGG | + | chr8_2:58908310-58908329 | None:intergenic | 35.0% | |
| AATAATGTACGTATGCTGGT+AGG | + | chr8_2:58908311-58908330 | None:intergenic | 35.0% | |
| CAGAAATAATGTACGTATGC+TGG | + | chr8_2:58908315-58908334 | None:intergenic | 35.0% | |
| AGACACATATACTAGACATC+TGG | - | chr8_2:58908509-58908528 | Msa1257890:CDS | 35.0% | |
| TAGTGATTTAAGTGAGGACT+AGG | + | chr8_2:58908622-58908641 | None:intergenic | 35.0% | |
| GATGTCTAGTGATTTAAGTG+AGG | + | chr8_2:58908628-58908647 | None:intergenic | 35.0% | |
| CACTTAAATCACTAGACATC+AGG | - | chr8_2:58908628-58908647 | Msa1257890:intron | 35.0% | |
| ! | GTAGGAGCTTTGATTTAAGA+AGG | + | chr8_2:58908702-58908721 | None:intergenic | 35.0% |
| ATGCCTAACATAGTTACTGT+AGG | + | chr8_2:58908720-58908739 | None:intergenic | 35.0% | |
| ATACATACAATACTCAGAGG+TGG | - | chr8_2:58908850-58908869 | Msa1257890:intron | 35.0% | |
| TACATACAATACTCAGAGGT+GGG | - | chr8_2:58908851-58908870 | Msa1257890:intron | 35.0% | |
| ! | TCATAGATGAGACCTTTTCA+TGG | - | chr8_2:58908943-58908962 | Msa1257890:intron | 35.0% |
| CAATAAAGGAGACATAAGAG+AGG | - | chr8_2:58909041-58909060 | Msa1257890:intron | 35.0% | |
| !!! | GTGTTTATTTTGTAGCACAC+TGG | - | chr8_2:58909087-58909106 | Msa1257890:intron | 35.0% |
| CAAAATTTCTTTGGATCAGG+CGG | + | chr8_2:58909127-58909146 | None:intergenic | 35.0% | |
| TAAAGGTTGAGGTAAGAAAG+AGG | - | chr8_2:58909218-58909237 | Msa1257890:intron | 35.0% | |
| CAACTCTGATCCATAAAACT+CGG | + | chr8_2:58909283-58909302 | None:intergenic | 35.0% | |
| TTTCATGCCTATTCTTATGC+TGG | - | chr8_2:58909493-58909512 | Msa1257890:intron | 35.0% | |
| ! | TCCTGTGGGAAGAATTATTT+TGG | - | chr8_2:58909537-58909556 | Msa1257890:intron | 35.0% |
| TCCAAAATAATTCTTCCCAC+AGG | + | chr8_2:58909541-58909560 | None:intergenic | 35.0% | |
| !!! | ATTATTTTGGAATTGCCTGC+TGG | - | chr8_2:58909550-58909569 | Msa1257890:intron | 35.0% |
| !! | ATGTTTGGCTTGCAACTAAA+AGG | + | chr8_2:58909692-58909711 | None:intergenic | 35.0% |
| CAAGCTAAATGTAGAAGACA+TGG | - | chr8_2:58909804-58909823 | Msa1257890:intron | 35.0% | |
| AGCTCAATATATACAGGAGA+GGG | + | chr8_2:58909877-58909896 | None:intergenic | 35.0% | |
| AAGCTCAATATATACAGGAG+AGG | + | chr8_2:58909878-58909897 | None:intergenic | 35.0% | |
| !! | GTTAAACTTCTGGTCGTTTT+AGG | - | chr8_2:58910111-58910130 | Msa1257890:intron | 35.0% |
| TTAGAAATGGCCAAGAAAGA+AGG | - | chr8_2:58910575-58910594 | Msa1257890:CDS | 35.0% | |
| AGGCAATAATCCTTCTTTCT+TGG | + | chr8_2:58910588-58910607 | None:intergenic | 35.0% | |
| AGAAGGATTATTGCCTTCTT+TGG | - | chr8_2:58910592-58910611 | Msa1257890:CDS | 35.0% | |
| ! | TACAATTAGGTTGCCAAAGA+AGG | + | chr8_2:58910608-58910627 | None:intergenic | 35.0% |
| TCTTTCGTTACTCGTGTTCA+TGG | + | chr8_2:58905737-58905756 | None:intergenic | 40.0% | |
| CTTCTATAGTTGCTAACGCA+GGG | - | chr8_2:58905775-58905794 | Msa1257890:three_prime_UTR | 40.0% | |
| ! | ATCAAATTGGGAGCGTGAAA+TGG | + | chr8_2:58905865-58905884 | None:intergenic | 40.0% |
| GAATGACCAGAAATCAGAAG+AGG | + | chr8_2:58906016-58906035 | None:intergenic | 40.0% | |
| CAACCACTGCTTGAATAAAG+AGG | + | chr8_2:58906148-58906167 | None:intergenic | 40.0% | |
| !! | GAGAATGGGATTTTAGCCAA+TGG | - | chr8_2:58906183-58906202 | Msa1257890:intron | 40.0% |
| TCTGAGAGTCATTGTACCAT+TGG | + | chr8_2:58906202-58906221 | None:intergenic | 40.0% | |
| ACTAATCCATTTCATCCTCC+AGG | + | chr8_2:58906462-58906481 | None:intergenic | 40.0% | |
| ! | GTAGGGTAACCATTAGTTTG+AGG | - | chr8_2:58906728-58906747 | Msa1257890:CDS | 40.0% |
| ! | GTTTGAGGTAAAGGAAAACC+AGG | - | chr8_2:58906743-58906762 | Msa1257890:CDS | 40.0% |
| GATACATGAATGAACAGACC+AGG | + | chr8_2:58907023-58907042 | None:intergenic | 40.0% | |
| AAACAGGGAGTAGACATGTT+TGG | - | chr8_2:58907085-58907104 | Msa1257890:intron | 40.0% | |
| AACAGGGAGTAGACATGTTT+GGG | - | chr8_2:58907086-58907105 | Msa1257890:intron | 40.0% | |
| TGACAAAGAAACAGGGAACA+AGG | - | chr8_2:58907147-58907166 | Msa1257890:intron | 40.0% | |
| ATAATGTTGGAGATCCGGAT+AGG | + | chr8_2:58907276-58907295 | None:intergenic | 40.0% | |
| GCACCAAAGTAATATCTAGG+AGG | - | chr8_2:58907372-58907391 | Msa1257890:intron | 40.0% | |
| TTAGTAGCAGGGATTGAACT+TGG | + | chr8_2:58907400-58907419 | None:intergenic | 40.0% | |
| !! | AAGGTGTTGATTGGTGGAAT+TGG | - | chr8_2:58907490-58907509 | Msa1257890:intron | 40.0% |
| TATATCCAGGATGCCTTGAA+AGG | + | chr8_2:58907656-58907675 | None:intergenic | 40.0% | |
| TGTGATTTCCATACGCTGAA+AGG | - | chr8_2:58907793-58907812 | Msa1257890:intron | 40.0% | |
| GTGATTTCCATACGCTGAAA+GGG | - | chr8_2:58907794-58907813 | Msa1257890:intron | 40.0% | |
| ! | TTTTCTGTCTAGAAGTCACG+AGG | - | chr8_2:58907837-58907856 | Msa1257890:intron | 40.0% |
| TTTCTGTCTAGAAGTCACGA+GGG | - | chr8_2:58907838-58907857 | Msa1257890:intron | 40.0% | |
| GTCATAGGATCCAAAATCCT+TGG | - | chr8_2:58907904-58907923 | Msa1257890:intron | 40.0% | |
| GTAAATCATGATCAGGTTCC+AGG | - | chr8_2:58908033-58908052 | Msa1257890:intron | 40.0% | |
| CCTCTTGCAAATACAATACC+TGG | + | chr8_2:58908054-58908073 | None:intergenic | 40.0% | |
| ! | CCAGGTATTGTATTTGCAAG+AGG | - | chr8_2:58908051-58908070 | Msa1257890:intron | 40.0% |
| ! | TGTGGCTATGCTGATACTTT+TGG | - | chr8_2:58908080-58908099 | Msa1257890:intron | 40.0% |
| !!! | GCTGATACTTTTGGAATCAG+AGG | - | chr8_2:58908089-58908108 | Msa1257890:intron | 40.0% |
| GTATGCTGTTCTTACTGATC+AGG | - | chr8_2:58908119-58908138 | Msa1257890:intron | 40.0% | |
| GCTCCTACAGTAACTATGTT+AGG | - | chr8_2:58908714-58908733 | Msa1257890:intron | 40.0% | |
| ATTTGGGTAACGTTAACTGC+CGG | + | chr8_2:58908826-58908845 | None:intergenic | 40.0% | |
| TGGCACACTCAAATGTTGAT+TGG | + | chr8_2:58908900-58908919 | None:intergenic | 40.0% | |
| ACAAGAGTCACAATAAGTCG+TGG | + | chr8_2:58908920-58908939 | None:intergenic | 40.0% | |
| ATCAAACACGTTTCCCTTAG+AGG | - | chr8_2:58909185-58909204 | Msa1257890:intron | 40.0% | |
| TTATTTCCCCCAACCTCTAA+GGG | + | chr8_2:58909201-58909220 | None:intergenic | 40.0% | |
| TTTATTTCCCCCAACCTCTA+AGG | + | chr8_2:58909202-58909221 | None:intergenic | 40.0% | |
| TTAGAGGTTGGGGGAAATAA+AGG | - | chr8_2:58909201-58909220 | Msa1257890:intron | 40.0% | |
| AAGCGATAAAATTTCACCGG+TGG | - | chr8_2:58909244-58909263 | Msa1257890:intron | 40.0% | |
| AGCGATAAAATTTCACCGGT+GGG | - | chr8_2:58909245-58909264 | Msa1257890:intron | 40.0% | |
| ATAAAATTTCACCGGTGGGA+TGG | - | chr8_2:58909249-58909268 | Msa1257890:intron | 40.0% | |
| TTATAAGGCAAGAGTTCCTG+TGG | - | chr8_2:58909522-58909541 | Msa1257890:intron | 40.0% | |
| TATAAGGCAAGAGTTCCTGT+GGG | - | chr8_2:58909523-58909542 | Msa1257890:intron | 40.0% | |
| GATGACAAGGGTGATATTGT+AGG | - | chr8_2:58909583-58909602 | Msa1257890:intron | 40.0% | |
| ATATTGTAGGCACAGCAGTT+CGG | - | chr8_2:58909596-58909615 | Msa1257890:intron | 40.0% | |
| ACTTTGTGAAGTTGTGACTC+TGG | - | chr8_2:58909758-58909777 | Msa1257890:intron | 40.0% | |
| GCTCAATATATACAGGAGAG+GGG | + | chr8_2:58909876-58909895 | None:intergenic | 40.0% | |
| ATTGCACGCAGTTAAACTTC+TGG | - | chr8_2:58910101-58910120 | Msa1257890:intron | 40.0% | |
| !!! | CTTTTTCGGTGTTATTAGGG+AGG | - | chr8_2:58910368-58910387 | Msa1257890:CDS | 40.0% |
| TGGTACCATACAAGAACCTT+TGG | - | chr8_2:58910510-58910529 | Msa1257890:intron | 40.0% | |
| CTCTGCGTAGCATTACAATT+AGG | + | chr8_2:58910621-58910640 | None:intergenic | 40.0% | |
| ATTGGATAGAGACTTTGCTC+TGG | - | chr8_2:58910682-58910701 | Msa1257890:CDS | 40.0% | |
| ! | GCAGTATTTTACTTGATGCG+TGG | + | chr8_2:58910813-58910832 | None:intergenic | 40.0% |
| CCTGCGTTAGCAACTATAGA+AGG | + | chr8_2:58905777-58905796 | None:intergenic | 45.0% | |
| CCTTCTATAGTTGCTAACGC+AGG | - | chr8_2:58905774-58905793 | Msa1257890:three_prime_UTR | 45.0% | |
| ! | GGGCTTTTAAGCTTCTTCGA+TGG | - | chr8_2:58905795-58905814 | Msa1257890:three_prime_UTR | 45.0% |
| AAATCAGAAGAGGAGACACC+AGG | + | chr8_2:58906006-58906025 | None:intergenic | 45.0% | |
| GTGTCTCCTCTTCTGATTTC+TGG | - | chr8_2:58906007-58906026 | Msa1257890:CDS | 45.0% | |
| !! | CATCGCCGGCTTTATAGTTT+AGG | + | chr8_2:58906542-58906561 | None:intergenic | 45.0% |
| ATAAAGCCGGCGATGTTGTA+TGG | - | chr8_2:58906547-58906566 | Msa1257890:intron | 45.0% | |
| TCAGTTCCATACAACATCGC+CGG | + | chr8_2:58906556-58906575 | None:intergenic | 45.0% | |
| AACTGTGTCCGCGTACATAT+TGG | - | chr8_2:58907250-58907269 | Msa1257890:intron | 45.0% | |
| ! | GGGGCACCAAAGTAATATCT+AGG | - | chr8_2:58907369-58907388 | Msa1257890:intron | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | + | chr8_2:58907431-58907450 | None:intergenic | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | + | chr8_2:58907431-58907450 | None:intergenic | 45.0% |
| ! | TCTTACCTTTCAAGGCATCC+TGG | - | chr8_2:58907648-58907667 | Msa1257890:intron | 45.0% |
| !! | ACGAAGAGGGTATCATATGC+AGG | - | chr8_2:58907766-58907785 | Msa1257890:intron | 45.0% |
| !! | CGAAGAGGGTATCATATGCA+GGG | - | chr8_2:58907767-58907786 | Msa1257890:intron | 45.0% |
| ATCCAAAATCCTTGGAACCC+AGG | - | chr8_2:58907912-58907931 | Msa1257890:intron | 45.0% | |
| ! | ATCCTGGGTTCCAAGGATTT+TGG | + | chr8_2:58907917-58907936 | None:intergenic | 45.0% |
| ACCCAGGATGTGATAGACAT+CGG | - | chr8_2:58907928-58907947 | Msa1257890:intron | 45.0% | |
| AACACGTTTCCCTTAGAGGT+TGG | - | chr8_2:58909189-58909208 | Msa1257890:intron | 45.0% | |
| ACACGTTTCCCTTAGAGGTT+GGG | - | chr8_2:58909190-58909209 | Msa1257890:intron | 45.0% | |
| GTTGGGGGAAATAAAGGTTG+AGG | - | chr8_2:58909207-58909226 | Msa1257890:intron | 45.0% | |
| CTCTGATCCATAAAACTCGG+CGG | + | chr8_2:58909280-58909299 | None:intergenic | 45.0% | |
| TGGAATGTTGGACGATGACA+AGG | - | chr8_2:58909570-58909589 | Msa1257890:intron | 45.0% | |
| GGAATGTTGGACGATGACAA+GGG | - | chr8_2:58909571-58909590 | Msa1257890:intron | 45.0% | |
| TATTGTAGGCACAGCAGTTC+GGG | - | chr8_2:58909597-58909616 | Msa1257890:intron | 45.0% | |
| TGCATTGCAATGCTTCTGCA+TGG | - | chr8_2:58910015-58910034 | Msa1257890:intron | 45.0% | |
| GAGATCATCACACATCTCCA+AGG | - | chr8_2:58910440-58910459 | Msa1257890:intron | 45.0% | |
| CATCTCCAAGGTAAAGAGAC+TGG | - | chr8_2:58910452-58910471 | Msa1257890:intron | 45.0% | |
| TGAACATGGGGAGCTGATTA+AGG | - | chr8_2:58910481-58910500 | Msa1257890:intron | 45.0% | |
| AACAGCAGATTGCAAGGTTC+TGG | - | chr8_2:58910538-58910557 | Msa1257890:intron | 45.0% | |
| GGCTGTTGCACTGTTAGAAA+TGG | - | chr8_2:58910562-58910581 | Msa1257890:CDS | 45.0% | |
| TACTTGATGCGTGGACGATA+TGG | + | chr8_2:58910804-58910823 | None:intergenic | 45.0% | |
| !!! | ATTTATTTTTTTTCTATTAT+AGG | - | chr8_2:58906109-58906128 | Msa1257890:CDS | 5.0% |
| !! | TAAATAAACTAATAAATATA+TGG | + | chr8_2:58907966-58907985 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTACTTTA+AGG | - | chr8_2:58908973-58908992 | Msa1257890:intron | 5.0% |
| GTGAGTCAATGACGGTGACT+CGG | + | chr8_2:58905932-58905951 | None:intergenic | 50.0% | |
| ACGGGTTCGGATTGTTTACG+CGG | + | chr8_2:58905967-58905986 | None:intergenic | 50.0% | |
| ! | AGCGAGAATGTGAACGGGTT+CGG | + | chr8_2:58905980-58905999 | None:intergenic | 50.0% |
| AGGAGCAGCGAGAATGTGAA+CGG | + | chr8_2:58905986-58906005 | None:intergenic | 50.0% | |
| GTATCCTTAGAGTCGAAGCC+TGG | - | chr8_2:58906441-58906460 | Msa1257890:intron | 50.0% | |
| TCGAAGCCTGGAGGATGAAA+TGG | - | chr8_2:58906453-58906472 | Msa1257890:intron | 50.0% | |
| ! | GACATGTTTGGGAAGCGCAT+TGG | - | chr8_2:58907097-58907116 | Msa1257890:intron | 50.0% |
| CGGATAGGCCAATATGTACG+CGG | + | chr8_2:58907261-58907280 | None:intergenic | 50.0% | |
| ! | CGCGTACATATTGGCCTATC+CGG | - | chr8_2:58907259-58907278 | Msa1257890:intron | 50.0% |
| TACCACTTGGCCACTCCTTT+GGG | + | chr8_2:58907343-58907362 | None:intergenic | 50.0% | |
| ATACCACTTGGCCACTCCTT+TGG | + | chr8_2:58907344-58907363 | None:intergenic | 50.0% | |
| AGTGGCCAAGTGGTATGTGT+CGG | - | chr8_2:58907348-58907367 | Msa1257890:intron | 50.0% | |
| TGTGATGCCCTTTCAGCGTA+TGG | + | chr8_2:58907804-58907823 | None:intergenic | 50.0% | |
| CTATCACATCCTGGGTTCCA+AGG | + | chr8_2:58907924-58907943 | None:intergenic | 50.0% | |
| CCCGATGTCTATCACATCCT+GGG | + | chr8_2:58907932-58907951 | None:intergenic | 50.0% | |
| CCCAGGATGTGATAGACATC+GGG | - | chr8_2:58907929-58907948 | Msa1257890:intron | 50.0% | |
| ACCCGATGTCTATCACATCC+TGG | + | chr8_2:58907933-58907952 | None:intergenic | 50.0% | |
| ATTTGCAAGAGGACCAGCTG+TGG | - | chr8_2:58908062-58908081 | Msa1257890:intron | 50.0% | |
| AGTATCAGCATAGCCACAGC+TGG | + | chr8_2:58908078-58908097 | None:intergenic | 50.0% | |
| TGGCAGACACTACTACTGCT+GGG | + | chr8_2:58908880-58908899 | None:intergenic | 50.0% | |
| TTGGCAGACACTACTACTGC+TGG | + | chr8_2:58908881-58908900 | None:intergenic | 50.0% | |
| AAGAGAGGGTGACAGTGAGA+TGG | - | chr8_2:58909056-58909075 | Msa1257890:intron | 50.0% | |
| CACGTTTCCCTTAGAGGTTG+GGG | - | chr8_2:58909191-58909210 | Msa1257890:intron | 50.0% | |
| ACGTTTCCCTTAGAGGTTGG+GGG | - | chr8_2:58909192-58909211 | Msa1257890:intron | 50.0% | |
| GGAATTGCCTGCTGGAATGT+TGG | - | chr8_2:58909558-58909577 | Msa1257890:intron | 50.0% | |
| TCATCGTCCAACATTCCAGC+AGG | + | chr8_2:58909568-58909587 | None:intergenic | 50.0% | |
| TGTGAAGTTGTGACTCTGGC+AGG | - | chr8_2:58909762-58909781 | Msa1257890:intron | 50.0% | |
| ! | TGGCAGGTTGAAGAAGAGAC+AGG | - | chr8_2:58909778-58909797 | Msa1257890:intron | 50.0% |
| AAGAGTCCAGGAAAGCAGTG+AGG | + | chr8_2:58909834-58909853 | None:intergenic | 50.0% | |
| GCTTTCCTGGACTCTTCAAC+TGG | - | chr8_2:58909838-58909857 | Msa1257890:intron | 50.0% | |
| TGCTTCCAGTTGAAGAGTCC+AGG | + | chr8_2:58909846-58909865 | None:intergenic | 50.0% | |
| GAAGGCCAGTCTCTTTACCT+TGG | + | chr8_2:58910460-58910479 | None:intergenic | 50.0% | |
| !! | AGACTGGCCTTCGTGAACAT+GGG | - | chr8_2:58910468-58910487 | Msa1257890:intron | 50.0% |
| GTGCGCCAAAGGTTCTTGTA+TGG | + | chr8_2:58910518-58910537 | None:intergenic | 50.0% | |
| AATCTGCTGTTGTGCGCCAA+AGG | + | chr8_2:58910529-58910548 | None:intergenic | 50.0% | |
| ! | AGCAGATTGCAAGGTTCTGG+TGG | - | chr8_2:58910541-58910560 | Msa1257890:intron | 50.0% |
| ! | AGTCAATGACGGTGACTCGG+TGG | + | chr8_2:58905929-58905948 | None:intergenic | 55.0% |
| GGAGCAGCGAGAATGTGAAC+GGG | + | chr8_2:58905985-58906004 | None:intergenic | 55.0% | |
| GTTCACATTCTCGCTGCTCC+TGG | - | chr8_2:58905985-58906004 | Msa1257890:CDS | 55.0% | |
| TCCTTAGAGTCGAAGCCTGG+AGG | - | chr8_2:58906444-58906463 | Msa1257890:intron | 55.0% | |
| TCCTCCAGGCTTCGACTCTA+AGG | + | chr8_2:58906448-58906467 | None:intergenic | 55.0% | |
| TTCCCAAAGGAGTGGCCAAG+TGG | - | chr8_2:58907338-58907357 | Msa1257890:intron | 55.0% | |
| GTGGCCAAGTGGTATGTGTC+GGG | - | chr8_2:58907349-58907368 | Msa1257890:intron | 55.0% | |
| TGGCCAAGTGGTATGTGTCG+GGG | - | chr8_2:58907350-58907369 | Msa1257890:intron | 55.0% | |
| ! | GGTGAGTCCGCCGAGTTTTA+TGG | - | chr8_2:58909270-58909289 | Msa1257890:intron | 55.0% |
| GGTTGACCTCACTGCTTTCC+TGG | - | chr8_2:58909825-58909844 | Msa1257890:intron | 55.0% | |
| !! | GAGACTGGCCTTCGTGAACA+TGG | - | chr8_2:58910467-58910486 | Msa1257890:intron | 55.0% |
| !! | GACTGGCCTTCGTGAACATG+GGG | - | chr8_2:58910469-58910488 | Msa1257890:intron | 55.0% |
| TCAGCTCCCCATGTTCACGA+AGG | + | chr8_2:58910478-58910497 | None:intergenic | 55.0% | |
| GGAGCTGATTAAGGTGCGTG+TGG | - | chr8_2:58910490-58910509 | Msa1257890:intron | 55.0% | |
| GCGCACAACAGCAGATTGCA+AGG | - | chr8_2:58910532-58910551 | Msa1257890:intron | 55.0% | |
| GTGCCCCGACACATACCACT+TGG | + | chr8_2:58907356-58907375 | None:intergenic | 60.0% | |
| TGTAGGCACAGCAGTTCGGG+AGG | - | chr8_2:58909600-58909619 | Msa1257890:intron | 60.0% | |
| ! | CGGCGGACTCACCATCCCAC+CGG | + | chr8_2:58909263-58909282 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 58905668 | 58910906 | 58905668 | ID=Msa1257890;Name=Msa1257890 |
| chr8_2 | mRNA | 58905668 | 58910906 | 58905668 | ID=Msa1257890-mRNA-1;Parent=Msa1257890;Name=Msa1257890-mRNA-1;_AED=0.22;_eAED=0.22;_QI=146|0.83|0.71|1|1|1|7|284|320 |
| chr8_2 | exon | 58905668 | 58906188 | 58905668 | ID=Msa1257890-mRNA-1:exon:18256;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58906692 | 58906790 | 58906692 | ID=Msa1257890-mRNA-1:exon:18255;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58906953 | 58907045 | 58906953 | ID=Msa1257890-mRNA-1:exon:18254;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58908434 | 58908545 | 58908434 | ID=Msa1257890-mRNA-1:exon:18253;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58909383 | 58909483 | 58909383 | ID=Msa1257890-mRNA-1:exon:18252;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58910338 | 58910443 | 58910338 | ID=Msa1257890-mRNA-1:exon:18251;Parent=Msa1257890-mRNA-1 |
| chr8_2 | exon | 58910546 | 58910906 | 58910546 | ID=Msa1257890-mRNA-1:exon:18250;Parent=Msa1257890-mRNA-1 |
| chr8_2 | five_prime_UTR | 58910761 | 58910906 | 58910761 | ID=Msa1257890-mRNA-1:five_prime_utr;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58910546 | 58910760 | 58910546 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58910338 | 58910443 | 58910338 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58909383 | 58909483 | 58909383 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58908434 | 58908545 | 58908434 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58906953 | 58907045 | 58906953 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58906692 | 58906790 | 58906692 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | CDS | 58905952 | 58906188 | 58905952 | ID=Msa1257890-mRNA-1:cds;Parent=Msa1257890-mRNA-1 |
| chr8_2 | three_prime_UTR | 58905668 | 58905951 | 58905668 | ID=Msa1257890-mRNA-1:three_prime_utr;Parent=Msa1257890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
