Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298970 | XP_003608776.4 | 90.966 | 321 | 15 | 1 | 1 | 321 | 1 | 307 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298970 | sp|Q9SZ63|NUD14_ARATH | 70.486 | 288 | 69 | 2 | 31 | 318 | 31 | 302 | 5.22e-141 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298970 | G7JK61 | 90.966 | 321 | 15 | 1 | 1 | 321 | 1 | 307 | 0.0 | 582 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1257890 | Msa1298970 | 0.828617 | 8.138812e-55 | -8.615850e-47 |
| Msa1257900 | Msa1298970 | 0.861025 | 1.370413e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298970 | MtrunA17_Chr4g0056651 | 90.966 | 321 | 15 | 1 | 1 | 321 | 1 | 307 | 0.0 | 582 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1298970 | AT4G11980.1 | 70.486 | 288 | 69 | 2 | 31 | 318 | 31 | 302 | 5.30e-142 | 403 |
Find 86 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTCTCCTCTTCTGATTTC+TGG | 0.076913 | 8_3:-59937794 | Msa1298970:intron |
| TCCTGTGGGAAGAATTATTT+TGG | 0.176950 | 8_3:-59934340 | Msa1298970:CDS |
| TTATGGTTTCTATAACTTAT+TGG | 0.177686 | 8_3:-59933122 | Msa1298970:three_prime_UTR |
| AGAAGGATTATTGCCTTCTT+TGG | 0.207755 | 8_3:-59933285 | Msa1298970:CDS |
| TATGGTTTCTATAACTTATT+GGG | 0.251061 | 8_3:-59933121 | Msa1298970:three_prime_UTR |
| GGTTGACCTCACTGCTTTCC+TGG | 0.256840 | 8_3:-59934052 | Msa1298970:CDS |
| TTATTATGTCTAGCTCCTTA+TGG | 0.271990 | 8_3:-59933139 | Msa1298970:three_prime_UTR |
| CTTCTTCTTAGAAATCAAAT+TGG | 0.277859 | 8_3:+59937929 | None:intergenic |
| AGGCAATAATCCTTCTTTCT+TGG | 0.280187 | 8_3:+59933292 | None:intergenic |
| TGGGAGTATGAAGTGGCTTT+AGG | 0.292010 | 8_3:+59937949 | None:intergenic |
| TCTTTCGTTACTCGTGTTCA+TGG | 0.318672 | 8_3:+59938070 | None:intergenic |
| CTCTGCGTAGCATTACAATT+AGG | 0.325402 | 8_3:+59933259 | None:intergenic |
| TGAACATGGGGAGCTGATTA+AGG | 0.331333 | 8_3:-59933396 | Msa1298970:CDS |
| CATAATTTGCAAACAGAGAA+TGG | 0.350954 | 8_3:-59937634 | Msa1298970:CDS |
| TGTGGCTATGCTGATACTTT+TGG | 0.352770 | 8_3:-59935721 | Msa1298970:CDS |
| GAGATTATTGACAAAGAAAC+AGG | 0.356462 | 8_3:-59936662 | Msa1298970:CDS |
| GTAAATCATGATCAGGTTCC+AGG | 0.362368 | 8_3:-59935768 | Msa1298970:CDS |
| TATTGTAGGCACAGCAGTTC+GGG | 0.366455 | 8_3:-59934280 | Msa1298970:CDS |
| TACAATTAGGTTGCCAAAGA+AGG | 0.375860 | 8_3:+59933272 | None:intergenic |
| AACAGGGAGTAGACATGTTT+GGG | 0.387600 | 8_3:-59936715 | Msa1298970:intron |
| AAACAGGGAGTAGACATGTT+TGG | 0.395153 | 8_3:-59936716 | Msa1298970:intron |
| TACTTGATGCGTGGACGATA+TGG | 0.403057 | 8_3:+59933076 | None:intergenic |
| AAACATGTTATGCAAATCAT+AGG | 0.412099 | 8_3:+59936628 | None:intergenic |
| AGCGAGAATGTGAACGGGTT+CGG | 0.418130 | 8_3:+59937824 | None:intergenic |
| GCTTTCCTGGACTCTTCAAC+TGG | 0.418805 | 8_3:-59934039 | Msa1298970:CDS |
| TTCTTCTTAGAAATCAAATT+GGG | 0.432810 | 8_3:+59937930 | None:intergenic |
| GTTCACATTCTCGCTGCTCC+TGG | 0.436111 | 8_3:-59937816 | Msa1298970:CDS |
| TGTTTCTTTGTCAATAATCT+CGG | 0.440352 | 8_3:+59936664 | None:intergenic |
| TCTGCGTTAGCAACTATAGA+AGG | 0.443276 | 8_3:+59938030 | None:intergenic |
| TAGTAAAGTAAATCATGATC+AGG | 0.463951 | 8_3:-59935775 | Msa1298970:CDS |
| GAGACTGGCCTTCGTGAACA+TGG | 0.464259 | 8_3:-59933410 | Msa1298970:CDS |
| AACAGCAGATTGCAAGGTTC+TGG | 0.465296 | 8_3:-59933339 | Msa1298970:CDS |
| GTATGCTGTTCTTACTGATC+AGG | 0.474563 | 8_3:-59935682 | Msa1298970:intron |
| ATAATTTGCAAACAGAGAAT+GGG | 0.475311 | 8_3:-59937633 | Msa1298970:CDS |
| TCTGAGAGTCATTGTACCAT+TGG | 0.480991 | 8_3:+59937603 | None:intergenic |
| AGCTCAATATATACAGGAGA+GGG | 0.481521 | 8_3:+59934003 | None:intergenic |
| GGCTGTTGCACTGTTAGAAA+TGG | 0.482756 | 8_3:-59933315 | Msa1298970:CDS |
| GATGACAAGGGTGATATTGT+AGG | 0.485313 | 8_3:-59934294 | Msa1298970:CDS |
| GACATGTTTGGGAAGCGCAT+TGG | 0.492141 | 8_3:-59936704 | Msa1298970:CDS |
| TGCTTCCAGTTGAAGAGTCC+AGG | 0.494978 | 8_3:+59934034 | None:intergenic |
| TGGTACCATACAAGAACCTT+TGG | 0.499032 | 8_3:-59933367 | Msa1298970:CDS |
| CAACCACTGCTTGAATAAAG+AGG | 0.500121 | 8_3:+59937657 | None:intergenic |
| ATATTGTAGGCACAGCAGTT+CGG | 0.501769 | 8_3:-59934281 | Msa1298970:CDS |
| TTAAAATAGTATAGAACATG+TGG | 0.507932 | 8_3:-59933000 | Msa1298970:three_prime_UTR |
| AATAAGTTATAGAAACCATA+AGG | 0.508019 | 8_3:+59933124 | None:intergenic |
| CCTCTTGCAAATACAATACC+TGG | 0.509588 | 8_3:+59935750 | None:intergenic |
| ATTGGATAGAGACTTTGCTC+TGG | 0.517325 | 8_3:-59933195 | Msa1298970:three_prime_UTR |
| AAATCAGAAGAGGAGACACC+AGG | 0.535597 | 8_3:+59937798 | None:intergenic |
| GTGCGCCAAAGGTTCTTGTA+TGG | 0.536766 | 8_3:+59933362 | None:intergenic |
| TTAGAAATGGCCAAGAAAGA+AGG | 0.541378 | 8_3:-59933302 | Msa1298970:CDS |
| TTGTTTACGCGGAAGCGTGA+TGG | 0.544245 | 8_3:+59937848 | None:intergenic |
| GGAATTGCCTGCTGGAATGT+TGG | 0.549721 | 8_3:-59934319 | Msa1298970:CDS |
| GAAGGCCAGTCTCTTTACCT+TGG | 0.550388 | 8_3:+59933420 | None:intergenic |
| ATTCCTCTTTATTCAAGCAG+TGG | 0.554918 | 8_3:-59937660 | Msa1298970:CDS |
| CCAGGTATTGTATTTGCAAG+AGG | 0.555102 | 8_3:-59935750 | Msa1298970:CDS |
| TGACAAAGAAACAGGGAACA+AGG | 0.558788 | 8_3:-59936654 | Msa1298970:CDS |
| TCCAAAATAATTCTTCCCAC+AGG | 0.563140 | 8_3:+59934339 | None:intergenic |
| TGGCAGGTTGAAGAAGAGAC+AGG | 0.570033 | 8_3:-59934099 | Msa1298970:intron |
| AGACTGGCCTTCGTGAACAT+GGG | 0.570468 | 8_3:-59933409 | Msa1298970:CDS |
| AGTATCAGCATAGCCACAGC+TGG | 0.570896 | 8_3:+59935726 | None:intergenic |
| ATCAAATTGGGAGTATGAAG+TGG | 0.572085 | 8_3:+59937942 | None:intergenic |
| TCATCGTCCAACATTCCAGC+AGG | 0.573349 | 8_3:+59934312 | None:intergenic |
| GCGCACAACAGCAGATTGCA+AGG | 0.575266 | 8_3:-59933345 | Msa1298970:CDS |
| CAAGCTAAATGTAGAAGACA+TGG | 0.576281 | 8_3:-59934073 | Msa1298970:CDS |
| GGAGCAGCGAGAATGTGAAC+GGG | 0.577923 | 8_3:+59937819 | None:intergenic |
| CATCTCCAAGGTAAAGAGAC+TGG | 0.580100 | 8_3:-59933425 | Msa1298970:CDS |
| AGGAGCAGCGAGAATGTGAA+CGG | 0.585766 | 8_3:+59937818 | None:intergenic |
| AGCAGATTGCAAGGTTCTGG+TGG | 0.586787 | 8_3:-59933336 | Msa1298970:CDS |
| AATCTGCTGTTGTGCGCCAA+AGG | 0.597228 | 8_3:+59933351 | None:intergenic |
| TTATAAGGCAAGAGTTCCTG+TGG | 0.602408 | 8_3:-59934355 | Msa1298970:intron |
| TGGAATGTTGGACGATGACA+AGG | 0.606260 | 8_3:-59934307 | Msa1298970:CDS |
| GACTGGCCTTCGTGAACATG+GGG | 0.615008 | 8_3:-59933408 | Msa1298970:CDS |
| GAGATCATCACACATCTCCA+AGG | 0.618343 | 8_3:-59933437 | Msa1298970:CDS |
| GAATGACCAGAAATCAGAAG+AGG | 0.626066 | 8_3:+59937788 | None:intergenic |
| AAGCTCAATATATACAGGAG+AGG | 0.630817 | 8_3:+59934002 | None:intergenic |
| GTGAGTCAATAACGATGACT+CGG | 0.650422 | 8_3:+59937872 | None:intergenic |
| TGTAGGCACAGCAGTTCGGG+AGG | 0.655418 | 8_3:-59934277 | Msa1298970:intron |
| TATAAGGCAAGAGTTCCTGT+GGG | 0.664649 | 8_3:-59934354 | Msa1298970:intron |
| GCTCAATATATACAGGAGAG+GGG | 0.669054 | 8_3:+59934004 | None:intergenic |
| ATTTGCAAGAGGACCAGCTG+TGG | 0.669747 | 8_3:-59935739 | Msa1298970:CDS |
| ACGGGTTCGGATTGTTTACG+CGG | 0.696511 | 8_3:+59937837 | None:intergenic |
| TCAGCTCCCCATGTTCACGA+AGG | 0.700716 | 8_3:+59933402 | None:intergenic |
| AAGAGTCCAGGAAAGCAGTG+AGG | 0.702074 | 8_3:+59934046 | None:intergenic |
| GGAGCTGATTAAGGTGCGTG+TGG | 0.720710 | 8_3:-59933387 | Msa1298970:CDS |
| AGATTATTGACAAAGAAACA+GGG | 0.740365 | 8_3:-59936661 | Msa1298970:CDS |
| GGAATGTTGGACGATGACAA+GGG | 0.808727 | 8_3:-59934306 | Msa1298970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATGAATTGAAAAAT+AGG | + | chr8_3:59933366-59933385 | None:intergenic | 10.0% |
| !! | AAAAACAGTTATTTAAATAA+AGG | - | chr8_3:59934799-59934818 | Msa1298970:intron | 10.0% |
| !! | TATATATATAAAAACAAACT+TGG | + | chr8_3:59935724-59935743 | None:intergenic | 10.0% |
| !! | TTATAAAGAAAATATTGTTA+TGG | + | chr8_3:59936695-59936714 | None:intergenic | 10.0% |
| !! | TTAAATTTCAATAAATTCAT+GGG | + | chr8_3:59937444-59937463 | None:intergenic | 10.0% |
| !! | TATCATTAGCAAAAAAAAAA+AGG | - | chr8_3:59934005-59934024 | Msa1298970:intron | 15.0% |
| !! | ATAAGTTATTAAGAATGATT+TGG | - | chr8_3:59934101-59934120 | Msa1298970:intron | 15.0% |
| !!! | AATTTTGTTATTATGATTGT+AGG | + | chr8_3:59934373-59934392 | None:intergenic | 15.0% |
| !! | ACAATCATAATAACAAAATT+TGG | - | chr8_3:59934373-59934392 | Msa1298970:intron | 15.0% |
| !!! | ATAACTGTTTTTTTTTAGAT+TGG | + | chr8_3:59934791-59934810 | None:intergenic | 15.0% |
| !! | TATTGTATGTATATTCATTT+GGG | + | chr8_3:59936094-59936113 | None:intergenic | 15.0% |
| !! | ATAAGGTAAATAAATATGTT+TGG | + | chr8_3:59936959-59936978 | None:intergenic | 15.0% |
| !! | CTTAAATTTCAATAAATTCA+TGG | + | chr8_3:59937445-59937464 | None:intergenic | 15.0% |
| !! | TTCTTCTTAGAAATCAAATT+GGG | + | chr8_3:59933202-59933221 | None:intergenic | 20.0% |
| !! | AATCTATTGCAAATTATAGA+GGG | - | chr8_3:59933657-59933676 | Msa1298970:intron | 20.0% |
| !! | TTAGCAAAAAAAAAAAGGTA+TGG | - | chr8_3:59934010-59934029 | Msa1298970:intron | 20.0% |
| !! | TGATTCATGATACAATATTA+TGG | - | chr8_3:59934148-59934167 | Msa1298970:intron | 20.0% |
| !! | TTATTTGATGTTGTTAAGAT+TGG | - | chr8_3:59934201-59934220 | Msa1298970:intron | 20.0% |
| !! | ATCATAATAACAAAATTTGG+CGG | - | chr8_3:59934376-59934395 | Msa1298970:intron | 20.0% |
| !!! | GATTTTTTTTGGTATAAACA+GGG | - | chr8_3:59934398-59934417 | Msa1298970:intron | 20.0% |
| !!! | ATTTAAATAAAGGTGTTGAT+TGG | - | chr8_3:59934809-59934828 | Msa1298970:intron | 20.0% |
| !!! | TATGAATCAAATTTTTCTTG+AGG | + | chr8_3:59934952-59934971 | None:intergenic | 20.0% |
| !!! | TGTATATGATCTATATGTTT+TGG | + | chr8_3:59935701-59935720 | None:intergenic | 20.0% |
| !! | AAATGATCTCTATAATGAAT+TGG | - | chr8_3:59935831-59935850 | Msa1298970:intron | 20.0% |
| !! | GTATTGTATGTATATTCATT+TGG | + | chr8_3:59936095-59936114 | None:intergenic | 20.0% |
| !! | GAATCTATAATATTGTTAAC+AGG | - | chr8_3:59936404-59936423 | Msa1298970:intron | 20.0% |
| !! | CTGATATACAATATATCTAA+AGG | - | chr8_3:59936626-59936645 | Msa1298970:intron | 20.0% |
| !! | AAAAACAAACCAATTATATC+TGG | - | chr8_3:59936715-59936734 | Msa1298970:intron | 20.0% |
| !! | AATGAAATTCCAGATATAAT+TGG | + | chr8_3:59936727-59936746 | None:intergenic | 20.0% |
| !!! | TTATGCTGGATATTTTTATA+AGG | - | chr8_3:59936759-59936778 | Msa1298970:intron | 20.0% |
| !!! | TGAATGTTGTTATTTCAATA+AGG | + | chr8_3:59936976-59936995 | None:intergenic | 20.0% |
| !!! | TTCTTATTCTCTTTCTTTTT+CGG | - | chr8_3:59937606-59937625 | Msa1298970:CDS | 20.0% |
| !! | AATAAGTTATAGAAACCATA+AGG | + | chr8_3:59938008-59938027 | None:intergenic | 20.0% |
| !! | TTATGGTTTCTATAACTTAT+TGG | - | chr8_3:59938007-59938026 | Msa1298970:exon | 20.0% |
| !! | TATGGTTTCTATAACTTATT+GGG | - | chr8_3:59938008-59938027 | Msa1298970:exon | 20.0% |
| !! | TTAAAATAGTATAGAACATG+TGG | - | chr8_3:59938129-59938148 | Msa1298970:five_prime_UTR | 20.0% |
| ! | TTGATGTAACCAAAAATACA+TGG | - | chr8_3:59933009-59933028 | Msa1298970:three_prime_UTR | 25.0% |
| ! | TGATGTAACCAAAAATACAT+GGG | - | chr8_3:59933010-59933029 | Msa1298970:three_prime_UTR | 25.0% |
| ! | CTTCTTCTTAGAAATCAAAT+TGG | + | chr8_3:59933203-59933222 | None:intergenic | 25.0% |
| !! | ATAATTTGCAAACAGAGAAT+GGG | - | chr8_3:59933496-59933515 | Msa1298970:intron | 25.0% |
| ! | TTTAATTCAGGTGATTCATT+AGG | - | chr8_3:59933554-59933573 | Msa1298970:intron | 25.0% |
| ! | GAATCTATTGCAAATTATAG+AGG | - | chr8_3:59933656-59933675 | Msa1298970:intron | 25.0% |
| ! | ATCTATTGCAAATTATAGAG+GGG | - | chr8_3:59933658-59933677 | Msa1298970:intron | 25.0% |
| ! | TATCACAATGTAAGTATCTT+GGG | - | chr8_3:59933702-59933721 | Msa1298970:intron | 25.0% |
| !!! | AGTGCTTCTAGTTTAATTTA+TGG | - | chr8_3:59933806-59933825 | Msa1298970:intron | 25.0% |
| ! | TATGGTGAAAAAATATCACT+CGG | - | chr8_3:59933824-59933843 | Msa1298970:intron | 25.0% |
| !! | TAATAACTTATAGTTTTCCC+TGG | + | chr8_3:59934092-59934111 | None:intergenic | 25.0% |
| !! | AAGAATGATTTGGAACTAAA+TGG | - | chr8_3:59934111-59934130 | Msa1298970:intron | 25.0% |
| !!! | AAAATTTGGCGGATTTTTTT+TGG | - | chr8_3:59934387-59934406 | Msa1298970:intron | 25.0% |
| !!! | GGATTTTTTTTGGTATAAAC+AGG | - | chr8_3:59934397-59934416 | Msa1298970:intron | 25.0% |
| ! | TGTTTCTTTGTCAATAATCT+CGG | + | chr8_3:59934468-59934487 | None:intergenic | 25.0% |
| ! | AGATTATTGACAAAGAAACA+GGG | - | chr8_3:59934468-59934487 | Msa1298970:intron | 25.0% |
| ! | AAACATGTTATGCAAATCAT+AGG | + | chr8_3:59934504-59934523 | None:intergenic | 25.0% |
| !!! | TTTTCATTATTAGCCTATTG+AGG | - | chr8_3:59934521-59934540 | Msa1298970:intron | 25.0% |
| ! | AGTCATTGTTCAAATAATGT+TGG | + | chr8_3:59934617-59934636 | None:intergenic | 25.0% |
| ! | CATTATTTGAACAATGACTA+TGG | - | chr8_3:59934618-59934637 | Msa1298970:intron | 25.0% |
| ! | TTTGAATAAAAGTTTCCCAA+AGG | - | chr8_3:59934653-59934672 | Msa1298970:intron | 25.0% |
| ! | AATAACCAAATAACTAAGCA+GGG | + | chr8_3:59934902-59934921 | None:intergenic | 25.0% |
| ! | CATATTTATCTTACCTTTCA+AGG | - | chr8_3:59934968-59934987 | Msa1298970:intron | 25.0% |
| ! | AAGTCGATGCATAAATATTT+AGG | - | chr8_3:59935003-59935022 | Msa1298970:intron | 25.0% |
| !! | ATTTTAAATGTCAAACGAAG+AGG | - | chr8_3:59935080-59935099 | Msa1298970:intron | 25.0% |
| !! | TTTTAAATGTCAAACGAAGA+GGG | - | chr8_3:59935081-59935100 | Msa1298970:intron | 25.0% |
| ! | AAAAGAAAGAAATCAGCATT+AGG | + | chr8_3:59935332-59935351 | None:intergenic | 25.0% |
| ! | TAGTAAAGTAAATCATGATC+AGG | - | chr8_3:59935354-59935373 | Msa1298970:intron | 25.0% |
| !! | TTTGAGATAATCAAGTTGTA+GGG | + | chr8_3:59935913-59935932 | None:intergenic | 25.0% |
| !! | ATTTGAGATAATCAAGTTGT+AGG | + | chr8_3:59935914-59935933 | None:intergenic | 25.0% |
| ! | CTAATATAGAAACATGACAA+CGG | + | chr8_3:59936011-59936030 | None:intergenic | 25.0% |
| !!! | CATTTTGTTTATTGCTTTTC+CGG | - | chr8_3:59936056-59936075 | Msa1298970:intron | 25.0% |
| ! | AATATACATACAATACTCAG+AGG | - | chr8_3:59936099-59936118 | Msa1298970:intron | 25.0% |
| ! | AAAAAAAAAACGCCATGAAA+AGG | + | chr8_3:59936210-59936229 | None:intergenic | 25.0% |
| !! | TTTAAGGTACAAATTACACT+AGG | - | chr8_3:59936241-59936260 | Msa1298970:intron | 25.0% |
| !!! | GATAAGCACCATTTTTTTAT+TGG | + | chr8_3:59936267-59936286 | None:intergenic | 25.0% |
| ! | ATTCTGATGCAAAATTTCTT+TGG | + | chr8_3:59936388-59936407 | None:intergenic | 25.0% |
| ! | TCAACATAATATCTAATGAG+AGG | + | chr8_3:59936558-59936577 | None:intergenic | 25.0% |
| ! | AAAATATCCAGCATAAGAAT+AGG | + | chr8_3:59936755-59936774 | None:intergenic | 25.0% |
| ! | TATTTCATTTGCATCACTAA+TGG | - | chr8_3:59936918-59936937 | Msa1298970:intron | 25.0% |
| ! | GTTTAGTATCATGATATTGT+TGG | - | chr8_3:59937304-59937323 | Msa1298970:intron | 25.0% |
| ! | TATACTTTAGCTGTCAAAAT+TGG | - | chr8_3:59937571-59937590 | Msa1298970:intron | 25.0% |
| !!! | TTTCTTTTTCGGTGTTATTA+GGG | - | chr8_3:59937617-59937636 | Msa1298970:CDS | 25.0% |
| ! | AAAAACAGAAGAGAGATTAT+TGG | - | chr8_3:59937916-59937935 | Msa1298970:CDS | 25.0% |
| ! | CATAATTTGCAAACAGAGAA+TGG | - | chr8_3:59933495-59933514 | Msa1298970:intron | 30.0% |
| !!! | TCTCAGACAAGTTTTAATTC+AGG | - | chr8_3:59933542-59933561 | Msa1298970:intron | 30.0% |
| TCTATTGCAAATTATAGAGG+GGG | - | chr8_3:59933659-59933678 | Msa1298970:intron | 30.0% | |
| GTATCACAATGTAAGTATCT+TGG | - | chr8_3:59933701-59933720 | Msa1298970:intron | 30.0% | |
| GTCTATCATACAAAATGATG+AGG | - | chr8_3:59933724-59933743 | Msa1298970:intron | 30.0% | |
| TGTATCCTAAACTATAAAGC+CGG | - | chr8_3:59933861-59933880 | Msa1298970:intron | 30.0% | |
| TACTATTGTAGAAAGGATGT+AGG | - | chr8_3:59934038-59934057 | Msa1298970:CDS | 30.0% | |
| ACTATTGTAGAAAGGATGTA+GGG | - | chr8_3:59934039-59934058 | Msa1298970:CDS | 30.0% | |
| ! | TAACCATTAGTTTGAGGTAA+AGG | - | chr8_3:59934062-59934081 | Msa1298970:CDS | 30.0% |
| TTTCCTTTACCTCAAACTAA+TGG | + | chr8_3:59934068-59934087 | None:intergenic | 30.0% | |
| GAGATTATTGACAAAGAAAC+AGG | - | chr8_3:59934467-59934486 | Msa1298970:intron | 30.0% | |
| AGACATGAAAATTCCTCAAT+AGG | + | chr8_3:59934537-59934556 | None:intergenic | 30.0% | |
| TTCAAATAATGTTGGAGATC+CGG | + | chr8_3:59934609-59934628 | None:intergenic | 30.0% | |
| !! | AGGTGAAAATTTTAGTAGCA+GGG | + | chr8_3:59934739-59934758 | None:intergenic | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | + | chr8_3:59934764-59934783 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | + | chr8_3:59934765-59934784 | None:intergenic | 30.0% |
| TTTAGATTGGCAAATGTTAG+TGG | + | chr8_3:59934778-59934797 | None:intergenic | 30.0% | |
| !! | TAAATAAAGGTGTTGATTGG+TGG | - | chr8_3:59934812-59934831 | Msa1298970:intron | 30.0% |
| !! | TGTTAGTGGTTAACTTGTTA+GGG | + | chr8_3:59934764-59934783 | None:intergenic | 30.0% |
| !! | ATGTTAGTGGTTAACTTGTT+AGG | + | chr8_3:59934765-59934784 | None:intergenic | 30.0% |
| TATAACCCTGCTTAGTTATT+TGG | - | chr8_3:59934894-59934913 | Msa1298970:intron | 30.0% | |
| CAATAACCAAATAACTAAGC+AGG | + | chr8_3:59934903-59934922 | None:intergenic | 30.0% | |
| TTCCTGATTGTACTAAACAT+GGG | + | chr8_3:59935032-59935051 | None:intergenic | 30.0% | |
| ATTCCTGATTGTACTAAACA+TGG | + | chr8_3:59935033-59935052 | None:intergenic | 30.0% | |
| CTAGACAGAAAAATATGTGT+GGG | + | chr8_3:59935157-59935176 | None:intergenic | 30.0% | |
| TCTAGACAGAAAAATATGTG+TGG | + | chr8_3:59935158-59935177 | None:intergenic | 30.0% | |
| AATTTGCAAACATCTGTCAT+AGG | - | chr8_3:59935217-59935236 | Msa1298970:intron | 30.0% | |
| !!! | CTATATGTTTTGGTTTGACA+GGG | + | chr8_3:59935691-59935710 | None:intergenic | 30.0% |
| !!! | TCTATATGTTTTGGTTTGAC+AGG | + | chr8_3:59935692-59935711 | None:intergenic | 30.0% |
| TCATCTAAAAACATCATCAC+TGG | + | chr8_3:59935812-59935831 | None:intergenic | 30.0% | |
| ! | CGTTGTCATGTTTCTATATT+AGG | - | chr8_3:59936009-59936028 | Msa1298970:intron | 30.0% |
| ! | TTAGGATTTTGTTCTTGACT+TGG | - | chr8_3:59936027-59936046 | Msa1298970:intron | 30.0% |
| ACACTAGGCCAATAAAAAAA+TGG | - | chr8_3:59936256-59936275 | Msa1298970:intron | 30.0% | |
| TGCTTATCACACTACAATAA+AGG | - | chr8_3:59936279-59936298 | Msa1298970:intron | 30.0% | |
| AATAAAGGAGACATAAGAGA+GGG | - | chr8_3:59936294-59936313 | Msa1298970:intron | 30.0% | |
| ATGCAAAATTTCTTTGGATC+AGG | + | chr8_3:59936382-59936401 | None:intergenic | 30.0% | |
| ATCAAGCGATAAAATTTCAC+CGG | - | chr8_3:59936493-59936512 | Msa1298970:intron | 30.0% | |
| GCAAAAAGCTCAATATATAC+AGG | + | chr8_3:59937135-59937154 | None:intergenic | 30.0% | |
| GATTTATATGCAATTCTGCA+TGG | + | chr8_3:59937413-59937432 | None:intergenic | 30.0% | |
| !!! | CTTTCTTTTTCGGTGTTATT+AGG | - | chr8_3:59937616-59937635 | Msa1298970:CDS | 30.0% |
| ! | TTATTATGTCTAGCTCCTTA+TGG | - | chr8_3:59937990-59938009 | Msa1298970:CDS | 30.0% |
| ! | TACTCACACCCATGTATTTT+TGG | + | chr8_3:59933021-59933040 | None:intergenic | 35.0% |
| ! | ATCAAATTGGGAGTATGAAG+TGG | + | chr8_3:59933190-59933209 | None:intergenic | 35.0% |
| ATTCCTCTTTATTCAAGCAG+TGG | - | chr8_3:59933469-59933488 | Msa1298970:CDS | 35.0% | |
| GTTGTATGGAACTGAATATC+AGG | - | chr8_3:59933888-59933907 | Msa1298970:intron | 35.0% | |
| GGATAGCTACTATTGTAGAA+AGG | - | chr8_3:59934031-59934050 | Msa1298970:CDS | 35.0% | |
| ! | TTTGAGGTAAAGGAAAACCA+GGG | - | chr8_3:59934072-59934091 | Msa1298970:CDS | 35.0% |
| ATAAGTTTCACTCGACAGTA+AGG | + | chr8_3:59934185-59934204 | None:intergenic | 35.0% | |
| ACTATCAACAACTGTTGATG+TGG | - | chr8_3:59934293-59934312 | Msa1298970:CDS | 35.0% | |
| GATGTGGCTATTCAATCAAA+AGG | - | chr8_3:59934309-59934328 | Msa1298970:CDS | 35.0% | |
| GGACATTCAATTGATATTCC+TGG | - | chr8_3:59934330-59934349 | Msa1298970:CDS | 35.0% | |
| ATAAAAGTTTCCCAAAGGAG+TGG | - | chr8_3:59934658-59934677 | Msa1298970:intron | 35.0% | |
| GAACCTCCTAGATATTACTT+TGG | + | chr8_3:59934706-59934725 | None:intergenic | 35.0% | |
| !! | GAGGTGAAAATTTTAGTAGC+AGG | + | chr8_3:59934740-59934759 | None:intergenic | 35.0% |
| CAGGGTTATACTAATGTTAG+TGG | + | chr8_3:59934884-59934903 | None:intergenic | 35.0% | |
| CTGTGCTACAATATATAGAG+TGG | - | chr8_3:59934923-59934942 | Msa1298970:intron | 35.0% | |
| !! | TTATGCATCGACTTATATCC+AGG | + | chr8_3:59934997-59935016 | None:intergenic | 35.0% |
| TTCCCATGTTTAGTACAATC+AGG | - | chr8_3:59935027-59935046 | Msa1298970:intron | 35.0% | |
| TTAGTACAATCAGGAATGTC+TGG | - | chr8_3:59935036-59935055 | Msa1298970:intron | 35.0% | |
| !!! | CTGATACTTTTGGAATCAGA+GGG | - | chr8_3:59935418-59935437 | Msa1298970:intron | 35.0% |
| CTTACTGATCAGGTATATGT+TGG | - | chr8_3:59935457-59935476 | Msa1298970:intron | 35.0% | |
| ATAATGTACGTATGCTGGTA+GGG | + | chr8_3:59935630-59935649 | None:intergenic | 35.0% | |
| AATAATGTACGTATGCTGGT+AGG | + | chr8_3:59935631-59935650 | None:intergenic | 35.0% | |
| CAGAAATAATGTACGTATGC+TGG | + | chr8_3:59935635-59935654 | None:intergenic | 35.0% | |
| AGACACATATACTAGACATC+TGG | - | chr8_3:59935761-59935780 | Msa1298970:CDS | 35.0% | |
| TAGTGATTTAAGTGAGGACT+AGG | + | chr8_3:59935874-59935893 | None:intergenic | 35.0% | |
| GATGTCTAGTGATTTAAGTG+AGG | + | chr8_3:59935880-59935899 | None:intergenic | 35.0% | |
| CACTTAAATCACTAGACATC+AGG | - | chr8_3:59935880-59935899 | Msa1298970:intron | 35.0% | |
| ! | GTAGGAGCTTTGATTTAAGA+AGG | + | chr8_3:59935954-59935973 | None:intergenic | 35.0% |
| ATGCCTAACATAGTTACTGT+AGG | + | chr8_3:59935972-59935991 | None:intergenic | 35.0% | |
| ATACATACAATACTCAGAGG+TGG | - | chr8_3:59936102-59936121 | Msa1298970:intron | 35.0% | |
| TACATACAATACTCAGAGGT+GGG | - | chr8_3:59936103-59936122 | Msa1298970:intron | 35.0% | |
| ! | TCATAGATGAGACCTTTTCA+TGG | - | chr8_3:59936195-59936214 | Msa1298970:intron | 35.0% |
| CAATAAAGGAGACATAAGAG+AGG | - | chr8_3:59936293-59936312 | Msa1298970:intron | 35.0% | |
| !!! | GTGTTTATTTTGTAGCACAC+TGG | - | chr8_3:59936339-59936358 | Msa1298970:intron | 35.0% |
| CAAAATTTCTTTGGATCAGG+CGG | + | chr8_3:59936379-59936398 | None:intergenic | 35.0% | |
| TAAAGGTTGAGGTAAGAAAG+AGG | - | chr8_3:59936470-59936489 | Msa1298970:intron | 35.0% | |
| CAACTCTGATCCATAAAACT+CGG | + | chr8_3:59936535-59936554 | None:intergenic | 35.0% | |
| TTTCATGCCTATTCTTATGC+TGG | - | chr8_3:59936745-59936764 | Msa1298970:intron | 35.0% | |
| ! | TCCTGTGGGAAGAATTATTT+TGG | - | chr8_3:59936789-59936808 | Msa1298970:intron | 35.0% |
| TCCAAAATAATTCTTCCCAC+AGG | + | chr8_3:59936793-59936812 | None:intergenic | 35.0% | |
| !!! | ATTATTTTGGAATTGCCTGC+TGG | - | chr8_3:59936802-59936821 | Msa1298970:intron | 35.0% |
| !! | ATGTTTGGCTTGCAACTAAA+AGG | + | chr8_3:59936944-59936963 | None:intergenic | 35.0% |
| CAAGCTAAATGTAGAAGACA+TGG | - | chr8_3:59937056-59937075 | Msa1298970:intron | 35.0% | |
| AGCTCAATATATACAGGAGA+GGG | + | chr8_3:59937129-59937148 | None:intergenic | 35.0% | |
| AAGCTCAATATATACAGGAG+AGG | + | chr8_3:59937130-59937149 | None:intergenic | 35.0% | |
| !! | GTTAAACTTCTGGTCGTTTT+AGG | - | chr8_3:59937363-59937382 | Msa1298970:intron | 35.0% |
| TTAGAAATGGCCAAGAAAGA+AGG | - | chr8_3:59937827-59937846 | Msa1298970:CDS | 35.0% | |
| AGGCAATAATCCTTCTTTCT+TGG | + | chr8_3:59937840-59937859 | None:intergenic | 35.0% | |
| AGAAGGATTATTGCCTTCTT+TGG | - | chr8_3:59937844-59937863 | Msa1298970:CDS | 35.0% | |
| ! | TACAATTAGGTTGCCAAAGA+AGG | + | chr8_3:59937860-59937879 | None:intergenic | 35.0% |
| TCTTTCGTTACTCGTGTTCA+TGG | + | chr8_3:59933062-59933081 | None:intergenic | 40.0% | |
| TCTGCGTTAGCAACTATAGA+AGG | + | chr8_3:59933102-59933121 | None:intergenic | 40.0% | |
| ! | GAGCTTTTAAGCTTCTTCGA+TGG | - | chr8_3:59933120-59933139 | Msa1298970:three_prime_UTR | 40.0% |
| GTGAGTCAATAACGATGACT+CGG | + | chr8_3:59933260-59933279 | None:intergenic | 40.0% | |
| GAATGACCAGAAATCAGAAG+AGG | + | chr8_3:59933344-59933363 | None:intergenic | 40.0% | |
| CAACCACTGCTTGAATAAAG+AGG | + | chr8_3:59933475-59933494 | None:intergenic | 40.0% | |
| !! | GAGAATGGGATTTTAGCCAA+TGG | - | chr8_3:59933510-59933529 | Msa1298970:intron | 40.0% |
| TCTGAGAGTCATTGTACCAT+TGG | + | chr8_3:59933529-59933548 | None:intergenic | 40.0% | |
| ACTAATCCATTTCATCCTCC+AGG | + | chr8_3:59933789-59933808 | None:intergenic | 40.0% | |
| ! | GTAGGGTAACCATTAGTTTG+AGG | - | chr8_3:59934056-59934075 | Msa1298970:CDS | 40.0% |
| ! | GTTTGAGGTAAAGGAAAACC+AGG | - | chr8_3:59934071-59934090 | Msa1298970:CDS | 40.0% |
| GATACATGAATGAACAGACC+AGG | + | chr8_3:59934351-59934370 | None:intergenic | 40.0% | |
| AAACAGGGAGTAGACATGTT+TGG | - | chr8_3:59934413-59934432 | Msa1298970:intron | 40.0% | |
| AACAGGGAGTAGACATGTTT+GGG | - | chr8_3:59934414-59934433 | Msa1298970:intron | 40.0% | |
| TGACAAAGAAACAGGGAACA+AGG | - | chr8_3:59934475-59934494 | Msa1298970:intron | 40.0% | |
| ATAATGTTGGAGATCCGGAT+AGG | + | chr8_3:59934604-59934623 | None:intergenic | 40.0% | |
| GCACCAAAGTAATATCTAGG+AGG | - | chr8_3:59934700-59934719 | Msa1298970:intron | 40.0% | |
| TTAGTAGCAGGGATTGAACT+TGG | + | chr8_3:59934728-59934747 | None:intergenic | 40.0% | |
| !! | AAGGTGTTGATTGGTGGAAT+TGG | - | chr8_3:59934818-59934837 | Msa1298970:intron | 40.0% |
| TATATCCAGGATGCCTTGAA+AGG | + | chr8_3:59934984-59935003 | None:intergenic | 40.0% | |
| TGTGATTTCCATACGCTGAA+AGG | - | chr8_3:59935121-59935140 | Msa1298970:intron | 40.0% | |
| GTGATTTCCATACGCTGAAA+GGG | - | chr8_3:59935122-59935141 | Msa1298970:intron | 40.0% | |
| ! | TTTTCTGTCTAGAAGTCACG+AGG | - | chr8_3:59935165-59935184 | Msa1298970:intron | 40.0% |
| TTTCTGTCTAGAAGTCACGA+GGG | - | chr8_3:59935166-59935185 | Msa1298970:intron | 40.0% | |
| GTCATAGGATCCAAAATCCT+TGG | - | chr8_3:59935232-59935251 | Msa1298970:intron | 40.0% | |
| GTAAATCATGATCAGGTTCC+AGG | - | chr8_3:59935361-59935380 | Msa1298970:intron | 40.0% | |
| CCTCTTGCAAATACAATACC+TGG | + | chr8_3:59935382-59935401 | None:intergenic | 40.0% | |
| ! | CCAGGTATTGTATTTGCAAG+AGG | - | chr8_3:59935379-59935398 | Msa1298970:intron | 40.0% |
| ! | TGTGGCTATGCTGATACTTT+TGG | - | chr8_3:59935408-59935427 | Msa1298970:intron | 40.0% |
| !!! | GCTGATACTTTTGGAATCAG+AGG | - | chr8_3:59935417-59935436 | Msa1298970:intron | 40.0% |
| GTATGCTGTTCTTACTGATC+AGG | - | chr8_3:59935447-59935466 | Msa1298970:intron | 40.0% | |
| GCTCCTACAGTAACTATGTT+AGG | - | chr8_3:59935966-59935985 | Msa1298970:intron | 40.0% | |
| ATTTGGGTAACGTTAACTGC+CGG | + | chr8_3:59936078-59936097 | None:intergenic | 40.0% | |
| TGGCACACTCAAATGTTGAT+TGG | + | chr8_3:59936152-59936171 | None:intergenic | 40.0% | |
| ACAAGAGTCACAATAAGTCG+TGG | + | chr8_3:59936172-59936191 | None:intergenic | 40.0% | |
| ATCAAACACGTTTCCCTTAG+AGG | - | chr8_3:59936437-59936456 | Msa1298970:intron | 40.0% | |
| TTATTTCCCCCAACCTCTAA+GGG | + | chr8_3:59936453-59936472 | None:intergenic | 40.0% | |
| TTTATTTCCCCCAACCTCTA+AGG | + | chr8_3:59936454-59936473 | None:intergenic | 40.0% | |
| TTAGAGGTTGGGGGAAATAA+AGG | - | chr8_3:59936453-59936472 | Msa1298970:intron | 40.0% | |
| AAGCGATAAAATTTCACCGG+TGG | - | chr8_3:59936496-59936515 | Msa1298970:intron | 40.0% | |
| AGCGATAAAATTTCACCGGT+GGG | - | chr8_3:59936497-59936516 | Msa1298970:intron | 40.0% | |
| ATAAAATTTCACCGGTGGGA+TGG | - | chr8_3:59936501-59936520 | Msa1298970:intron | 40.0% | |
| TTATAAGGCAAGAGTTCCTG+TGG | - | chr8_3:59936774-59936793 | Msa1298970:intron | 40.0% | |
| TATAAGGCAAGAGTTCCTGT+GGG | - | chr8_3:59936775-59936794 | Msa1298970:intron | 40.0% | |
| GATGACAAGGGTGATATTGT+AGG | - | chr8_3:59936835-59936854 | Msa1298970:intron | 40.0% | |
| ATATTGTAGGCACAGCAGTT+CGG | - | chr8_3:59936848-59936867 | Msa1298970:intron | 40.0% | |
| ACTTTGTGAAGTTGTGACTC+TGG | - | chr8_3:59937010-59937029 | Msa1298970:intron | 40.0% | |
| GCTCAATATATACAGGAGAG+GGG | + | chr8_3:59937128-59937147 | None:intergenic | 40.0% | |
| ATTGCACGCAGTTAAACTTC+TGG | - | chr8_3:59937353-59937372 | Msa1298970:intron | 40.0% | |
| !!! | CTTTTTCGGTGTTATTAGGG+AGG | - | chr8_3:59937620-59937639 | Msa1298970:CDS | 40.0% |
| TGGTACCATACAAGAACCTT+TGG | - | chr8_3:59937762-59937781 | Msa1298970:intron | 40.0% | |
| CTCTGCGTAGCATTACAATT+AGG | + | chr8_3:59937873-59937892 | None:intergenic | 40.0% | |
| ATTGGATAGAGACTTTGCTC+TGG | - | chr8_3:59937934-59937953 | Msa1298970:CDS | 40.0% | |
| ! | GCAGTATTTTACTTGATGCG+TGG | + | chr8_3:59938065-59938084 | None:intergenic | 40.0% |
| ! | TGGGAGTATGAAGTGGCTTT+AGG | + | chr8_3:59933183-59933202 | None:intergenic | 45.0% |
| AAATCAGAAGAGGAGACACC+AGG | + | chr8_3:59933334-59933353 | None:intergenic | 45.0% | |
| GTGTCTCCTCTTCTGATTTC+TGG | - | chr8_3:59933335-59933354 | Msa1298970:CDS | 45.0% | |
| !! | CATCGCCGGCTTTATAGTTT+AGG | + | chr8_3:59933869-59933888 | None:intergenic | 45.0% |
| ATAAAGCCGGCGATGTTGTA+TGG | - | chr8_3:59933874-59933893 | Msa1298970:intron | 45.0% | |
| TCAGTTCCATACAACATCGC+CGG | + | chr8_3:59933883-59933902 | None:intergenic | 45.0% | |
| AACTGTGTCCGCGTACATAT+TGG | - | chr8_3:59934578-59934597 | Msa1298970:intron | 45.0% | |
| ! | GGGGCACCAAAGTAATATCT+AGG | - | chr8_3:59934697-59934716 | Msa1298970:intron | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | + | chr8_3:59934759-59934778 | None:intergenic | 45.0% |
| !! | GTGGTTAACTTGTTAGGGAG+AGG | + | chr8_3:59934759-59934778 | None:intergenic | 45.0% |
| ! | TCTTACCTTTCAAGGCATCC+TGG | - | chr8_3:59934976-59934995 | Msa1298970:intron | 45.0% |
| !! | ACGAAGAGGGTATCATATGC+AGG | - | chr8_3:59935094-59935113 | Msa1298970:intron | 45.0% |
| !! | CGAAGAGGGTATCATATGCA+GGG | - | chr8_3:59935095-59935114 | Msa1298970:intron | 45.0% |
| ATCCAAAATCCTTGGAACCC+AGG | - | chr8_3:59935240-59935259 | Msa1298970:intron | 45.0% | |
| ! | ATCCTGGGTTCCAAGGATTT+TGG | + | chr8_3:59935245-59935264 | None:intergenic | 45.0% |
| ACCCAGGATGTGATAGACAT+CGG | - | chr8_3:59935256-59935275 | Msa1298970:intron | 45.0% | |
| AACACGTTTCCCTTAGAGGT+TGG | - | chr8_3:59936441-59936460 | Msa1298970:intron | 45.0% | |
| ACACGTTTCCCTTAGAGGTT+GGG | - | chr8_3:59936442-59936461 | Msa1298970:intron | 45.0% | |
| GTTGGGGGAAATAAAGGTTG+AGG | - | chr8_3:59936459-59936478 | Msa1298970:intron | 45.0% | |
| CTCTGATCCATAAAACTCGG+CGG | + | chr8_3:59936532-59936551 | None:intergenic | 45.0% | |
| TGGAATGTTGGACGATGACA+AGG | - | chr8_3:59936822-59936841 | Msa1298970:intron | 45.0% | |
| GGAATGTTGGACGATGACAA+GGG | - | chr8_3:59936823-59936842 | Msa1298970:intron | 45.0% | |
| TATTGTAGGCACAGCAGTTC+GGG | - | chr8_3:59936849-59936868 | Msa1298970:intron | 45.0% | |
| TGCATTGCAATGCTTCTGCA+TGG | - | chr8_3:59937267-59937286 | Msa1298970:intron | 45.0% | |
| GAGATCATCACACATCTCCA+AGG | - | chr8_3:59937692-59937711 | Msa1298970:intron | 45.0% | |
| CATCTCCAAGGTAAAGAGAC+TGG | - | chr8_3:59937704-59937723 | Msa1298970:intron | 45.0% | |
| TGAACATGGGGAGCTGATTA+AGG | - | chr8_3:59937733-59937752 | Msa1298970:intron | 45.0% | |
| AACAGCAGATTGCAAGGTTC+TGG | - | chr8_3:59937790-59937809 | Msa1298970:intron | 45.0% | |
| GGCTGTTGCACTGTTAGAAA+TGG | - | chr8_3:59937814-59937833 | Msa1298970:CDS | 45.0% | |
| TACTTGATGCGTGGACGATA+TGG | + | chr8_3:59938056-59938075 | None:intergenic | 45.0% | |
| !!! | TATTTATTTTTTTCTATTAT+AGG | - | chr8_3:59933436-59933455 | Msa1298970:CDS | 5.0% |
| !! | TAAATAAACTAATAAATATA+TGG | + | chr8_3:59935294-59935313 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTACTTTA+AGG | - | chr8_3:59936225-59936244 | Msa1298970:intron | 5.0% |
| ! | TTGTTTACGCGGAAGCGTGA+TGG | + | chr8_3:59933284-59933303 | None:intergenic | 50.0% |
| ACGGGTTCGGATTGTTTACG+CGG | + | chr8_3:59933295-59933314 | None:intergenic | 50.0% | |
| ! | AGCGAGAATGTGAACGGGTT+CGG | + | chr8_3:59933308-59933327 | None:intergenic | 50.0% |
| AGGAGCAGCGAGAATGTGAA+CGG | + | chr8_3:59933314-59933333 | None:intergenic | 50.0% | |
| GTATCCTTAGAGTCGAAGCC+TGG | - | chr8_3:59933768-59933787 | Msa1298970:intron | 50.0% | |
| TCGAAGCCTGGAGGATGAAA+TGG | - | chr8_3:59933780-59933799 | Msa1298970:intron | 50.0% | |
| ! | GACATGTTTGGGAAGCGCAT+TGG | - | chr8_3:59934425-59934444 | Msa1298970:intron | 50.0% |
| CGGATAGGCCAATATGTACG+CGG | + | chr8_3:59934589-59934608 | None:intergenic | 50.0% | |
| ! | CGCGTACATATTGGCCTATC+CGG | - | chr8_3:59934587-59934606 | Msa1298970:intron | 50.0% |
| TACCACTTGGCCACTCCTTT+GGG | + | chr8_3:59934671-59934690 | None:intergenic | 50.0% | |
| ATACCACTTGGCCACTCCTT+TGG | + | chr8_3:59934672-59934691 | None:intergenic | 50.0% | |
| AGTGGCCAAGTGGTATGTGT+CGG | - | chr8_3:59934676-59934695 | Msa1298970:intron | 50.0% | |
| TGTGATGCCCTTTCAGCGTA+TGG | + | chr8_3:59935132-59935151 | None:intergenic | 50.0% | |
| CTATCACATCCTGGGTTCCA+AGG | + | chr8_3:59935252-59935271 | None:intergenic | 50.0% | |
| CCCGATGTCTATCACATCCT+GGG | + | chr8_3:59935260-59935279 | None:intergenic | 50.0% | |
| CCCAGGATGTGATAGACATC+GGG | - | chr8_3:59935257-59935276 | Msa1298970:intron | 50.0% | |
| ACCCGATGTCTATCACATCC+TGG | + | chr8_3:59935261-59935280 | None:intergenic | 50.0% | |
| ATTTGCAAGAGGACCAGCTG+TGG | - | chr8_3:59935390-59935409 | Msa1298970:intron | 50.0% | |
| AGTATCAGCATAGCCACAGC+TGG | + | chr8_3:59935406-59935425 | None:intergenic | 50.0% | |
| TGGCAGACACTACTACTGCT+GGG | + | chr8_3:59936132-59936151 | None:intergenic | 50.0% | |
| TTGGCAGACACTACTACTGC+TGG | + | chr8_3:59936133-59936152 | None:intergenic | 50.0% | |
| AAGAGAGGGTGACAGTGAGA+TGG | - | chr8_3:59936308-59936327 | Msa1298970:intron | 50.0% | |
| CACGTTTCCCTTAGAGGTTG+GGG | - | chr8_3:59936443-59936462 | Msa1298970:intron | 50.0% | |
| ACGTTTCCCTTAGAGGTTGG+GGG | - | chr8_3:59936444-59936463 | Msa1298970:intron | 50.0% | |
| GGAATTGCCTGCTGGAATGT+TGG | - | chr8_3:59936810-59936829 | Msa1298970:intron | 50.0% | |
| TCATCGTCCAACATTCCAGC+AGG | + | chr8_3:59936820-59936839 | None:intergenic | 50.0% | |
| TGTGAAGTTGTGACTCTGGC+AGG | - | chr8_3:59937014-59937033 | Msa1298970:intron | 50.0% | |
| ! | TGGCAGGTTGAAGAAGAGAC+AGG | - | chr8_3:59937030-59937049 | Msa1298970:intron | 50.0% |
| AAGAGTCCAGGAAAGCAGTG+AGG | + | chr8_3:59937086-59937105 | None:intergenic | 50.0% | |
| GCTTTCCTGGACTCTTCAAC+TGG | - | chr8_3:59937090-59937109 | Msa1298970:intron | 50.0% | |
| TGCTTCCAGTTGAAGAGTCC+AGG | + | chr8_3:59937098-59937117 | None:intergenic | 50.0% | |
| GAAGGCCAGTCTCTTTACCT+TGG | + | chr8_3:59937712-59937731 | None:intergenic | 50.0% | |
| !! | AGACTGGCCTTCGTGAACAT+GGG | - | chr8_3:59937720-59937739 | Msa1298970:intron | 50.0% |
| GTGCGCCAAAGGTTCTTGTA+TGG | + | chr8_3:59937770-59937789 | None:intergenic | 50.0% | |
| AATCTGCTGTTGTGCGCCAA+AGG | + | chr8_3:59937781-59937800 | None:intergenic | 50.0% | |
| ! | AGCAGATTGCAAGGTTCTGG+TGG | - | chr8_3:59937793-59937812 | Msa1298970:intron | 50.0% |
| GGAGCAGCGAGAATGTGAAC+GGG | + | chr8_3:59933313-59933332 | None:intergenic | 55.0% | |
| GTTCACATTCTCGCTGCTCC+TGG | - | chr8_3:59933313-59933332 | Msa1298970:CDS | 55.0% | |
| TCCTTAGAGTCGAAGCCTGG+AGG | - | chr8_3:59933771-59933790 | Msa1298970:intron | 55.0% | |
| TCCTCCAGGCTTCGACTCTA+AGG | + | chr8_3:59933775-59933794 | None:intergenic | 55.0% | |
| TTCCCAAAGGAGTGGCCAAG+TGG | - | chr8_3:59934666-59934685 | Msa1298970:intron | 55.0% | |
| GTGGCCAAGTGGTATGTGTC+GGG | - | chr8_3:59934677-59934696 | Msa1298970:intron | 55.0% | |
| TGGCCAAGTGGTATGTGTCG+GGG | - | chr8_3:59934678-59934697 | Msa1298970:intron | 55.0% | |
| ! | GGTGAGTCCGCCGAGTTTTA+TGG | - | chr8_3:59936522-59936541 | Msa1298970:intron | 55.0% |
| GGTTGACCTCACTGCTTTCC+TGG | - | chr8_3:59937077-59937096 | Msa1298970:intron | 55.0% | |
| !! | GAGACTGGCCTTCGTGAACA+TGG | - | chr8_3:59937719-59937738 | Msa1298970:intron | 55.0% |
| !! | GACTGGCCTTCGTGAACATG+GGG | - | chr8_3:59937721-59937740 | Msa1298970:intron | 55.0% |
| TCAGCTCCCCATGTTCACGA+AGG | + | chr8_3:59937730-59937749 | None:intergenic | 55.0% | |
| GGAGCTGATTAAGGTGCGTG+TGG | - | chr8_3:59937742-59937761 | Msa1298970:intron | 55.0% | |
| GCGCACAACAGCAGATTGCA+AGG | - | chr8_3:59937784-59937803 | Msa1298970:intron | 55.0% | |
| GTGCCCCGACACATACCACT+TGG | + | chr8_3:59934684-59934703 | None:intergenic | 60.0% | |
| TGTAGGCACAGCAGTTCGGG+AGG | - | chr8_3:59936852-59936871 | Msa1298970:intron | 60.0% | |
| ! | CGGCGGACTCACCATCCCAC+CGG | + | chr8_3:59936515-59936534 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 59932993 | 59938158 | 59932993 | ID=Msa1298970;Name=Msa1298970 |
| chr8_3 | mRNA | 59932993 | 59938158 | 59932993 | ID=Msa1298970-mRNA-1;Parent=Msa1298970;Name=Msa1298970-mRNA-1;_AED=0.21;_eAED=0.21;_QI=146|0.83|0.71|1|1|1|7|284|321 |
| chr8_3 | exon | 59932993 | 59933513 | 59932993 | ID=Msa1298970-mRNA-1:exon:17423;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59934017 | 59934115 | 59934017 | ID=Msa1298970-mRNA-1:exon:17422;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59934278 | 59934370 | 59934278 | ID=Msa1298970-mRNA-1:exon:17421;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59935683 | 59935794 | 59935683 | ID=Msa1298970-mRNA-1:exon:17420;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59936632 | 59936732 | 59936632 | ID=Msa1298970-mRNA-1:exon:17419;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59937588 | 59937693 | 59937588 | ID=Msa1298970-mRNA-1:exon:17418;Parent=Msa1298970-mRNA-1 |
| chr8_3 | exon | 59937795 | 59938158 | 59937795 | ID=Msa1298970-mRNA-1:exon:17417;Parent=Msa1298970-mRNA-1 |
| chr8_3 | five_prime_UTR | 59938013 | 59938158 | 59938013 | ID=Msa1298970-mRNA-1:five_prime_utr;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59937795 | 59938012 | 59937795 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59937588 | 59937693 | 59937588 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59936632 | 59936732 | 59936632 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59935683 | 59935794 | 59935683 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59934278 | 59934370 | 59934278 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59934017 | 59934115 | 59934017 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | CDS | 59933277 | 59933513 | 59933277 | ID=Msa1298970-mRNA-1:cds;Parent=Msa1298970-mRNA-1 |
| chr8_3 | three_prime_UTR | 59932993 | 59933276 | 59932993 | ID=Msa1298970-mRNA-1:three_prime_utr;Parent=Msa1298970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
